FvH4_7g19190

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0012886
Physical Location & Seq
Forward (+)
15896420 .. 15900818
4399 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g19190.t2

Sequence Viewer

Length: 2163 bp
ATGGGAAGCAAATGGAGGAAGGCAAGGATGGCACTGGGTCTGAATCTCTGTGTCTATCTTCCCAAAACACTTGAAGACTCATCTCCTTCCTCTCTGGACTCAGAAGAGAGATTGTCTGATGCTGCTCTGCTTTCACCAGCCAATTTGGGCTCTTCCAGGCCCGCAACACCAACACAAACACCATCCTCTCATGGCTTGAAGCTCTCTAGAAGTGGAAGCAAATCTTCTTCCAAGACGTGCTCCATATGCTTAACCAAAATGAAACAAGGAGGTGGCCATGCTCTATTCACTGCCGAATGTTCACATTCTTTTCATTTCCACTGCATTGCATCGAATGTAAAACATGGCAACCAAATCTGCCCAGTTTGTAGGGCAAAATGGAAGGAAATCCCTCTACAGGGTCCCACTACGGATGCTTCACCTGGAAGGGCACCAATTGGTCCAGTAGGTTGGCCTCAGAATGATGCTTTGATGGCTGTTGTTCGCCGGATACCTCCTCCCCGAAGAGACTTGAGCCGAAGGCACATTGTGCCACTGTTTCCGGCTACTGAACCAGGTGTGTTCAATGATGATGAACCCTTGGATCACCAAGCTGTGGCTGCTGAGAGAAGCTCTTCCAATAAAAATTCTGCAGATGACAATTTTTTTAGAACGATAGAAATAAAAACATACCCTGAGGTTTCAGCTGTGTCGAAATCCAAATCTTTTGACAACTTTACAGTTTTGGTCAATCTGAAAGCCGCTGGTTCAACTACAACACAAAATCCTTGCAGAAATCAATCCAGCTCGCCGCAATTTTCTCAGAATCGTCGTGCTCCAGTAGACCTGGTCACAGTGCTTGACATCAGTGGTAGCATGGCAGGAACTAAGCTTGCACTGCTGAAACGGGCAATGGGGTTTGTGATACAGAATCTTGGCTCCAATGACAGGCTGTCAGTTATTGCCTTCTCTTCTACAGCCCGTCGCCTCTTTCCACTCCGCCGAATGACTGACACTGGACGCCAGCAGGCTCTGCAAGCTGTCAACTCTTTGGTTGCAAATGGTGGGACCAACATTGCCGAAGGCTTAAGAAAGGGTGGCAAGATATTGGAAGATCGGAGGGGAAAGAATCCTGTTGCCAGCATAATACTGTTGTCTGATGGTCAGGACACTTATACTGTCAGCGGGTCTGGGGCAAACCAAGCTCAACCAAATTATCAGTTGCTCCTCCCTTTGTCTATTCATAGTGGTGACAACACAGGCTTCCAGATTCCAGTGCATGCATTTGGGTTTGGTGCAGATCACGATGCATCATCGATGCATTCAATTTCAGAGATATCTGGAGGGACCTTTTCTTTTATTGAGACTGAAGCTGTTATCCAGGATGCATTTGCACAGTGCATTGGGGGTCTTTTGAGTGTTGTGGTTCAAGAGCTGCAGGTGGAAGTAGAGTGTGTGAATACAAATGTCTGCCTTGGTTCACTAAAGGCCGGAAGTTACCCAAGTCGTGTGATGGTTGGTGGACGCAAAGGGTCTATTGATGTTGGAGATTTATATGCCGAAGAAGAGAGGGATTTTCTGGTTTCAGTTAATGTCCCAGCAGAGTTTTCTAGCAATCTAACATCATTGATAAAGGTGAGATGCATTTACAAGGATCCCTTAGCTAAAGAAATGGCAACATTAGAGAGTGAAGAAGTTGGAATCGAGAGATCTGCAGTGGCCGGACAAGTAAGGGTGTCAATAGAAGTGGACAGGCAACGTAATAGGCTCCAAGCAGCTGAGGCAATGGCACAGGCACGAGCTGCAGCTGAGCGGGGAGACTTAGCTGGTGCAGCTTCAACCCTTGAAGATTGTCGAAGGGTATTGTCAGAGACTGTGTCAGCAAGATCTAATGACCGCCTGTGTGTAGCATTGGATGCCGAGCTCAAGGAAATGCAAGAGAGGATGGCAAGTAGGCATGTGTACGAGGCTTCTGGTAGAGCGTACATTCTTTCAGGACTGAGCTCACACTCATGGCAAAGAGCAACAGCTAGAGGTGACTCCACCGATGGTTCAAGCCTTGTTCAGTCCTATCAAACCCCGTCAATGGTTGAGATGCTTACACGATCTCAGGCTATGTTGTTGGGCAGTCCATCAGCCCAGAGGCTTATCCGACCATTATGTTCACAACCGAAGCCGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

721

Amino Acids

77.52

Weight (kDa)

8.8

Isoelectric Point (pI)

52.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 74 - 125 1.9e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 80 - 125 9.1e-08 Ring finger domain
zf-RING_11 PF17123 81 - 110 2.8e-08 RING-like zinc finger
zf-C3HC4 PF00097 81 - 124 3.3e-07 Zinc finger, C3HC4 type (RING finger)
VWA_CoxE PF05762 262 - 389 2.6e-09 VWA domain containing CoxE-like protein
VWA PF00092 276 - 458 7.5e-22 von Willebrand factor type A domain
VWA_3 PF13768 276 - 447 1.2e-17 von Willebrand factor type A domain
VWA_2 PF13519 277 - 383 1.5e-19 von Willebrand factor type A domain
Vwaint PF14624 626 - 698 1e-20 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012886)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G38970
fragaria_vesca FvH4_7g19190 FvH4_7g19190
malus_domestica MD01G1107300.v1.1 MD07G1173100.v1.1
pyrus_communis pycom01g13410 pycom07g16770
rosa_chinensis RchiOBHm_Chr1g0363051
rosa_laevigata RLG00000027598
rosa_multiflora Rmu_sc0004472.1_g000004
rosa_roxburghii Rroxscaffold_4G00293520
rosa_rugosa Rorug01G0304000 Rorug01G0304000
rosa_samantha Rh1AG313000 Rh1BG276200 Rh1CG293000 Rh1DG306900
rosa_wichuraiana Rw1G027730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1408
Acc36I ACCTGC 1 cut(s) 1408
AccB1I GGYRCC 1 cut(s) 430
AccB7I CCANNNNNTGG 1 cut(s) 595
AccBSI CCGCTC 1 cut(s) 1792
AccI GTMKAC 1 cut(s) 822
AciI CCGC 7 cut(s) 162, 741, 791, 979, 1164, 1792, 1876
AclWI GGATC 3 cut(s) 591, 1628, 1641
AcoI YGGCCR 2 cut(s) 274, 1698
AcsI RAATTY 1 cut(s) 625
AcuI CTGAAG 1 cut(s) 1368
AcyI GRCGYC 1 cut(s) 1000
AdeI CACNNNGTG 1 cut(s) 529
AfaI GTAC 2 cut(s) 1943, 1964
AfiI CCNNNNNNNGG 5 cut(s) 397, 398, 595, 927, 2065
AflII CTTAAG 1 cut(s) 1066
AgsI TTSAA 9 cut(s) 74, 199, 565, 750, 1305, 1409, 1818, 1826, 2034
AhdI GACNNNNNGTC 1 cut(s) 931
AjiI CACGTC 1 cut(s) 237
AjnI CCWGG 5 cut(s) 155, 421, 553, 825, 1359
Alw21I GWGCWC 4 cut(s) 242, 817, 1905, 1985
Alw26I GTCTC 4 cut(s) 501, 1337, 1791, 1844
AlwI GGATC 3 cut(s) 591, 1628, 1641
AlwNI CAGNNNCTG 2 cut(s) 1012, 1853
AoxI GGCC 5 cut(s) 158, 274, 452, 1467, 1698
ApeKI GCWGC 7 cut(s) 122, 599, 1414, 1754, 1781, 1784, 1811
ApoI RAATTY 1 cut(s) 625
Asp700I GAANNNNTTC 1 cut(s) 613
AspS9I GGNCC 5 cut(s) 159, 401, 440, 1047, 1326
AsuHPI GGTGA 6 cut(s) 126, 411, 578, 1241, 1627, 2027
AvaII GGWCC 4 cut(s) 401, 440, 1047, 1326
AxyI CCTNAGG 1 cut(s) 675
BaeGI GKGCMC 1 cut(s) 433
BalI TGGCCA 1 cut(s) 276
BamHI GGATCC 1 cut(s) 1633
BanI GGYRCC 1 cut(s) 430
BanII GRGCYC 3 cut(s) 152, 1905, 1985
BauI CACGAG 1 cut(s) 1776
BbsI GAAGAC 1 cut(s) 81
Bbv12I GWGCWC 4 cut(s) 242, 817, 1905, 1985
BbvCI CCTCAGC 1 cut(s) 1758
BbvI GCAGC 7 cut(s) 109, 586, 1401, 1766, 1768, 1796, 1823
BccI CCATC 8 cut(s) 22, 190, 466, 1133, 1486, 1918, 2021, 2119
BcgI CGANNNNNNTGC 2 cut(s) 1673, 1707
BciT130I CCWGG 5 cut(s) 157, 423, 555, 827, 1361
BciVI GTATCC 1 cut(s) 483
BcoDI GTCTC 4 cut(s) 501, 1337, 1791, 1844
BfaI CTAG 3 cut(s) 207, 1590, 2010
BfmI CTRYAG 6 cut(s) 395, 630, 954, 1415, 1692, 1782
BfrI CTTAAG 1 cut(s) 1066
BfuAI ACCTGC 1 cut(s) 1408
BfuI GTATCC 1 cut(s) 483
BglII AGATCT 2 cut(s) 1688, 1865
BisI GCNGC 9 cut(s) 123, 600, 741, 791, 1415, 1755, 1782, 1785, 1812
BlpI GCTNAGC 1 cut(s) 1788
BlsI GCNGC 9 cut(s) 124, 601, 742, 792, 1416, 1756, 1783, 1786, 1813
Bme1390I CCNGG 5 cut(s) 157, 423, 555, 827, 1361
Bme18I GGWCC 4 cut(s) 401, 440, 1047, 1326
BmeRI GACNNNNNGTC 1 cut(s) 931
BmgBI CACGTC 1 cut(s) 237
BmgT120I GGNCC 5 cut(s) 159, 401, 440, 1047, 1326
BmiI GGNNCC 8 cut(s) 402, 403, 432, 919, 1048, 1327, 1635, 1748
BmrFI CCNGG 5 cut(s) 157, 423, 555, 827, 1361
BmrI ACTGGG 2 cut(s) 44, 356
BmuI ACTGGG 2 cut(s) 44, 356
BpiI GAAGAC 1 cut(s) 81
BplI GAGNNNNNCTC 2 cut(s) 596, 628
BpmI CTGGAG 2 cut(s) 801, 1341
Bpu10I CCTNAGC 2 cut(s) 1639, 1758
Bpu1102I GCTNAGC 1 cut(s) 1788
BpuEI CTTGAG 2 cut(s) 532, 1889
Bsa29I ATCGAT 1 cut(s) 1295
BsaHI GRCGYC 1 cut(s) 1000
BsaJI CCNNGG 3 cut(s) 579, 1453, 2156
Bsc4I CCNNNNNNNGG 5 cut(s) 397, 398, 595, 927, 2065
Bse1I ACTGG 6 cut(s) 39, 362, 443, 818, 1000, 1253
Bse21I CCTNAGG 1 cut(s) 675
Bse3DI GCAATG 4 cut(s) 324, 897, 1053, 1770
BseBI CCWGG 5 cut(s) 157, 423, 555, 827, 1361
BseCI ATCGAT 1 cut(s) 1295
BseDI CCNNGG 3 cut(s) 579, 1453, 2156
BseGI GGATG 6 cut(s) 33, 182, 418, 1369, 1900, 1929
BseLI CCNNNNNNNGG 5 cut(s) 397, 398, 595, 927, 2065
BseMI GCAATG 4 cut(s) 324, 897, 1053, 1770
BseMII CTCAG 9 cut(s) 114, 470, 594, 666, 815, 1749, 1779, 1970, 2102
BseNI ACTGG 6 cut(s) 39, 362, 443, 818, 1000, 1253
BseRI GAGGAG 2 cut(s) 486, 1196
BseSI GKGCMC 1 cut(s) 433
BseXI GCAGC 7 cut(s) 109, 586, 1401, 1766, 1768, 1796, 1823
BseYI CCCAGC 1 cut(s) 1576
BsgI GTGCAG 2 cut(s) 1296, 1830
BshFI GGCC 5 cut(s) 160, 276, 454, 1469, 1700
BshNI GGYRCC 1 cut(s) 430
BshVI ATCGAT 1 cut(s) 1295
BsiHKAI GWGCWC 4 cut(s) 242, 817, 1905, 1985
BsiSI CCGG 4 cut(s) 487, 542, 1470, 1701
BslFI GGGAC 4 cut(s) 387, 1060, 1339, 1559
BslI CCNNNNNNNGG 5 cut(s) 397, 398, 595, 927, 2065
BsmAI GTCTC 4 cut(s) 501, 1337, 1791, 1844
BsmFI GGGAC 4 cut(s) 387, 1060, 1339, 1559
BsmI GAATGC 1 cut(s) 1300
BsnI GGCC 5 cut(s) 160, 276, 454, 1469, 1700
Bsp1286I GDGCHC 6 cut(s) 152, 242, 433, 817, 1905, 1985
Bsp143I GATC 7 cut(s) 583, 1093, 1279, 1633, 1688, 1865, 2084
Bsp1720I GCTNAGC 1 cut(s) 1788
BspACI CCGC 7 cut(s) 162, 741, 791, 979, 1164, 1792, 1876
BspANI GGCC 5 cut(s) 160, 276, 454, 1469, 1700
BspCNI CTCAG 9 cut(s) 113, 469, 595, 667, 814, 1750, 1780, 1971, 2101
BspDI ATCGAT 1 cut(s) 1295
BspLI GGNNCC 8 cut(s) 402, 403, 432, 919, 1048, 1327, 1635, 1748
BspMAI CTGCAG 4 cut(s) 634, 1419, 1696, 1786
BspMI ACCTGC 1 cut(s) 1408
BspPI GGATC 3 cut(s) 591, 1628, 1641
BspQI GCTCTTC 2 cut(s) 157, 619
BspT107I GGYRCC 1 cut(s) 430
BspTI CTTAAG 1 cut(s) 1066
BsrBI CCGCTC 1 cut(s) 1792
BsrDI GCAATG 4 cut(s) 324, 897, 1053, 1770
BsrI ACTGG 6 cut(s) 39, 362, 443, 818, 1000, 1253
BssECI CCNNGG 3 cut(s) 579, 1453, 2156
BssMI GATC 7 cut(s) 583, 1093, 1279, 1633, 1688, 1865, 2084
BssNI GRCGYC 1 cut(s) 1000
BssSI CACGAG 1 cut(s) 1776
BssT1I CCWWGG 2 cut(s) 579, 1453
Bst2BI CACGAG 1 cut(s) 1776
Bst2UI CCWGG 5 cut(s) 157, 423, 555, 827, 1361
Bst4CI ACNGT 7 cut(s) 537, 721, 835, 1131, 1159, 1377, 1855
Bst6I CTCTTC 6 cut(s) 99, 157, 499, 619, 955, 1539
BstACI GRCGYC 1 cut(s) 1000
BstAFI CTTAAG 1 cut(s) 1066
BstAPI GCANNNNNTGC 4 cut(s) 529, 1012, 1781, 1895
BstC8I GCNNGC 8 cut(s) 162, 788, 873, 1004, 1008, 1017, 1120, 1260
BstF5I GGATG 6 cut(s) 33, 182, 418, 1369, 1900, 1929
BstKTI GATC 7 cut(s) 586, 1096, 1282, 1636, 1691, 1868, 2087
BstMAI GTCTC 4 cut(s) 501, 1337, 1791, 1844
BstMBI GATC 7 cut(s) 583, 1093, 1279, 1633, 1688, 1865, 2084
BstNI CCWGG 5 cut(s) 157, 423, 555, 827, 1361
BstNSI RCATGY 2 cut(s) 1262, 1940
BstSCI CCNGG 5 cut(s) 155, 421, 553, 825, 1359
BstSFI CTRYAG 6 cut(s) 395, 630, 954, 1415, 1692, 1782
BstSLI GKGCMC 1 cut(s) 433
BstV1I GCAGC 7 cut(s) 109, 586, 1401, 1766, 1768, 1796, 1823
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 3 cut(s) 1633, 1688, 1865
BstXI CCANNNNNNTGG 1 cut(s) 450
BstYI RGATCY 3 cut(s) 1633, 1688, 1865
Bsu15I ATCGAT 1 cut(s) 1295
Bsu36I CCTNAGG 1 cut(s) 675
BsuI GTATCC 1 cut(s) 483
BsuRI GGCC 5 cut(s) 160, 276, 454, 1469, 1700
BsuTUI ATCGAT 1 cut(s) 1295
BtrI CACGTC 1 cut(s) 237
BtsCI GGATG 6 cut(s) 33, 182, 418, 1369, 1900, 1929
BtsI GCAGTG 4 cut(s) 288, 319, 875, 1701
BveI ACCTGC 1 cut(s) 1408
Cac8I GCNNGC 8 cut(s) 162, 788, 873, 1004, 1008, 1017, 1120, 1260
CaiI CAGNNNCTG 2 cut(s) 1012, 1853
Cfr13I GGNCC 5 cut(s) 159, 401, 440, 1047, 1326
ClaI ATCGAT 1 cut(s) 1295
CseI GACGC 2 cut(s) 1008, 1512
CsiI ACCWGGT 2 cut(s) 553, 825
Csp6I GTAC 2 cut(s) 1942, 1963
CspCI CAANNNNNGTGG 2 cut(s) 1707, 1742
CviAII CATG 7 cut(s) 191, 278, 344, 856, 1259, 1937, 1992
CviQI GTAC 2 cut(s) 1942, 1963
DpnI GATC 7 cut(s) 585, 1095, 1281, 1635, 1690, 1867, 2086
DpnII GATC 7 cut(s) 583, 1093, 1279, 1633, 1688, 1865, 2084
DraIII CACNNNGTG 1 cut(s) 529
DriI GACNNNNNGTC 1 cut(s) 931
EaeI YGGCCR 2 cut(s) 274, 1698
Eam1104I CTCTTC 6 cut(s) 99, 157, 499, 619, 955, 1539
Eam1105I GACNNNNNGTC 1 cut(s) 931
EarI CTCTTC 6 cut(s) 99, 157, 499, 619, 955, 1539
EciI GGCGGA 1 cut(s) 968
Ecl136II GAGCTC 2 cut(s) 1903, 1983
Eco130I CCWWGG 2 cut(s) 579, 1453
Eco24I GRGCYC 3 cut(s) 152, 1905, 1985
Eco32I GATATC 1 cut(s) 1317
Eco47I GGWCC 4 cut(s) 401, 440, 1047, 1326
Eco53kI GAGCTC 2 cut(s) 1903, 1983
Eco57I CTGAAG 1 cut(s) 1368
Eco81I CCTNAGG 1 cut(s) 675
EcoICRI GAGCTC 2 cut(s) 1903, 1983
EcoO109I RGGNCCY 2 cut(s) 401, 1326
EcoRII CCWGG 5 cut(s) 155, 421, 553, 825, 1359
EcoRV GATATC 1 cut(s) 1317
EcoT14I CCWWGG 2 cut(s) 579, 1453
EcoT22I ATGCAT 5 cut(s) 1264, 1291, 1302, 1369, 1625
EcoT38I GRGCYC 3 cut(s) 152, 1905, 1985
ErhI CCWWGG 2 cut(s) 579, 1453
FaeI CATG 7 cut(s) 194, 281, 347, 859, 1262, 1940, 1995
FalI AAGNNNNNCTT 4 cut(s) 208, 240, 1622, 1654
FaqI GGGAC 4 cut(s) 387, 1060, 1339, 1559
FatI CATG 7 cut(s) 190, 277, 343, 855, 1258, 1936, 1991
FauI CCCGC 3 cut(s) 169, 1157, 1785
FauNDI CATATG 1 cut(s) 245
FblI GTMKAC 1 cut(s) 822
Fnu4HI GCNGC 9 cut(s) 123, 600, 741, 791, 1415, 1755, 1782, 1785, 1812
FokI GGATG 6 cut(s) 40, 169, 425, 1376, 1907, 1936
FriOI GRGCYC 3 cut(s) 152, 1905, 1985
Fsp4HI GCNGC 9 cut(s) 123, 600, 741, 791, 1415, 1755, 1782, 1785, 1812
FspBI CTAG 3 cut(s) 207, 1590, 2010
GluI GCNGC 9 cut(s) 123, 600, 741, 791, 1415, 1755, 1782, 1785, 1812
GsaI CCCAGC 1 cut(s) 1580
GsuI CTGGAG 2 cut(s) 801, 1341
HaeIII GGCC 5 cut(s) 160, 276, 454, 1469, 1700
HapII CCGG 4 cut(s) 487, 542, 1470, 1701
HgaI GACGC 2 cut(s) 1008, 1512
Hin1I GRCGYC 1 cut(s) 1000
Hin1II CATG 7 cut(s) 194, 281, 347, 859, 1262, 1940, 1995
HincII GTYRAC 1 cut(s) 1024
HindII GTYRAC 1 cut(s) 1024
HindIII AAGCTT 1 cut(s) 869
HinfI GANTC 9 cut(s) 43, 77, 98, 805, 910, 1108, 1249, 1680, 2018
HpaII CCGG 4 cut(s) 487, 542, 1470, 1701
HphI GGTGA 6 cut(s) 126, 411, 578, 1241, 1627, 2027
Hpy166II GTNNAC 8 cut(s) 302, 823, 1024, 1460, 1502, 1729, 1942, 2144
Hpy188III TCNNGA 9 cut(s) 95, 207, 1145, 1246, 1283, 1320, 1409, 1684, 1974
Hpy8I GTNNAC 8 cut(s) 302, 823, 1024, 1460, 1502, 1729, 1942, 2144
Hpy99I CGWCG 2 cut(s) 813, 966
HpyAV CCTTC 8 cut(s) 13, 96, 376, 420, 513, 955, 1055, 1830
HpyCH4III ACNGT 7 cut(s) 537, 721, 835, 1131, 1159, 1377, 1855
HpyCH4IV ACGT 2 cut(s) 236, 1738
HpySE526I ACGT 2 cut(s) 236, 1738
Hsp92I GRCGYC 1 cut(s) 1000
Hsp92II CATG 7 cut(s) 194, 281, 347, 859, 1262, 1940, 1995
KflI GGGWCCC 1 cut(s) 401
Kzo9I GATC 7 cut(s) 583, 1093, 1279, 1633, 1688, 1865, 2084
LguI GCTCTTC 2 cut(s) 157, 619
LmnI GCTCC 5 cut(s) 245, 820, 923, 1209, 1752
Lsp1109I GCAGC 7 cut(s) 109, 586, 1401, 1766, 1768, 1796, 1823
MabI ACCWGGT 2 cut(s) 553, 825
MaeI CTAG 3 cut(s) 207, 1590, 2010
MaeII ACGT 2 cut(s) 236, 1738
MaeIII GTNAC 4 cut(s) 829, 1229, 1475, 2015
MalI GATC 7 cut(s) 585, 1095, 1281, 1635, 1690, 1867, 2086
MbiI CCGCTC 1 cut(s) 1792
MboI GATC 7 cut(s) 583, 1093, 1279, 1633, 1688, 1865, 2084
MfeI CAATTG 1 cut(s) 435
MflI RGATCY 3 cut(s) 1633, 1688, 1865
MhlI GDGCHC 6 cut(s) 152, 242, 433, 817, 1905, 1985
MlsI TGGCCA 1 cut(s) 276
MluCI AATT 7 cut(s) 142, 435, 625, 640, 794, 1192, 1305
MluNI TGGCCA 1 cut(s) 276
MlyI GAGTC 3 cut(s) 71, 92, 2012
MmeI TCCRAC 3 cut(s) 1504, 1657, 2155
Mox20I TGGCCA 1 cut(s) 276
Mph1103I ATGCAT 5 cut(s) 1264, 1291, 1302, 1369, 1625
MroXI GAANNNNTTC 1 cut(s) 613
MscI TGGCCA 1 cut(s) 276
MseI TTAA 3 cut(s) 251, 1067, 1569
MslI CAYNNNNRTG 2 cut(s) 1227, 1990
Msp20I TGGCCA 1 cut(s) 276
MspA1I CMGCKG 5 cut(s) 686, 743, 1164, 1757, 1787
MspCI CTTAAG 1 cut(s) 1066
MspI CCGG 4 cut(s) 487, 542, 1470, 1701
MspR9I CCNGG 5 cut(s) 157, 423, 555, 827, 1361
MunI CAATTG 1 cut(s) 435
Mva1269I GAATGC 1 cut(s) 1300
MvaI CCWGG 5 cut(s) 157, 423, 555, 827, 1361
NdeI CATATG 1 cut(s) 245
NdeII GATC 7 cut(s) 583, 1093, 1279, 1633, 1688, 1865, 2084
NlaIII CATG 7 cut(s) 194, 281, 347, 859, 1262, 1940, 1995
NlaIV GGNNCC 8 cut(s) 402, 403, 432, 919, 1048, 1327, 1635, 1748
NmeAIII GCCGAG 1 cut(s) 1924
NmuCI GTSAC 3 cut(s) 829, 1229, 2015
NsiI ATGCAT 5 cut(s) 1264, 1291, 1302, 1369, 1625
NspI RCATGY 2 cut(s) 1262, 1940
PaeI GCATGC 1 cut(s) 1262
PaqCI CACCTGC 1 cut(s) 1408
PciSI GCTCTTC 2 cut(s) 157, 619
PctI GAATGC 1 cut(s) 1300
PdmI GAANNNNTTC 1 cut(s) 613
PfeI GAWTC 6 cut(s) 43, 805, 910, 1108, 1249, 1680
PflFI GACNNNGTC 2 cut(s) 827, 1855
PflMI CCANNNNNTGG 1 cut(s) 595
PfoI TCCNGGA 1 cut(s) 1359
PkrI GCNGC 9 cut(s) 124, 601, 742, 792, 1416, 1756, 1783, 1786, 1813
PleI GAGTC 3 cut(s) 71, 92, 2012
PpsI GAGTC 3 cut(s) 71, 92, 2012
PpuMI RGGWCCY 2 cut(s) 401, 1326
Psp124BI GAGCTC 2 cut(s) 1905, 1985
Psp5II RGGWCCY 2 cut(s) 401, 1326
Psp6I CCWGG 5 cut(s) 155, 421, 553, 825, 1359
PspFI CCCAGC 1 cut(s) 1576
PspGI CCWGG 5 cut(s) 155, 421, 553, 825, 1359
PspN4I GGNNCC 8 cut(s) 402, 403, 432, 919, 1048, 1327, 1635, 1748
PspPI GGNCC 5 cut(s) 159, 401, 440, 1047, 1326
PspPPI RGGWCCY 2 cut(s) 401, 1326
PstI CTGCAG 4 cut(s) 634, 1419, 1696, 1786
PstNI CAGNNNCTG 2 cut(s) 1012, 1853
PsuI RGATCY 3 cut(s) 1633, 1688, 1865
PsyI GACNNNGTC 2 cut(s) 827, 1855
PvuII CAGCTG 3 cut(s) 686, 1757, 1787
RsaI GTAC 2 cut(s) 1943, 1964
RsaNI GTAC 2 cut(s) 1942, 1963
RseI CAYNNNNRTG 2 cut(s) 1227, 1990
SacI GAGCTC 2 cut(s) 1905, 1985
SapI GCTCTTC 2 cut(s) 157, 619
SaqAI TTAA 3 cut(s) 251, 1067, 1569
SatI GCNGC 9 cut(s) 123, 600, 741, 791, 1415, 1755, 1782, 1785, 1812
Sau3AI GATC 7 cut(s) 583, 1093, 1279, 1633, 1688, 1865, 2084
Sau96I GGNCC 5 cut(s) 159, 401, 440, 1047, 1326
SchI GAGTC 3 cut(s) 71, 92, 2012
ScrFI CCNGG 5 cut(s) 157, 423, 555, 827, 1361
SduI GDGCHC 6 cut(s) 152, 242, 433, 817, 1905, 1985
SexAI ACCWGGT 2 cut(s) 553, 825
SfcI CTRYAG 6 cut(s) 395, 630, 954, 1415, 1692, 1782
SinI GGWCC 4 cut(s) 401, 440, 1047, 1326
SmiMI CAYNNNNRTG 2 cut(s) 1227, 1990
SmlI CTYRAG 3 cut(s) 511, 1066, 1904
SmoI CTYRAG 3 cut(s) 511, 1066, 1904
SphI GCATGC 1 cut(s) 1262
Sse9I AATT 7 cut(s) 142, 435, 625, 640, 794, 1192, 1305
SsiI CCGC 7 cut(s) 162, 741, 791, 979, 1164, 1792, 1876
SspMI CTAG 3 cut(s) 207, 1590, 2010
SstI GAGCTC 2 cut(s) 1905, 1985
StyD4I CCNGG 5 cut(s) 155, 421, 553, 825, 1359
StyI CCWWGG 2 cut(s) 579, 1453
TaaI ACNGT 7 cut(s) 537, 721, 835, 1131, 1159, 1377, 1855
TaiI ACGT 2 cut(s) 239, 1741
TaqI TCGA 5 cut(s) 332, 692, 1295, 1683, 1834
TasI AATT 7 cut(s) 142, 435, 625, 640, 794, 1192, 1305
TauI GCSGC 2 cut(s) 743, 793
TfiI GAWTC 6 cut(s) 43, 805, 910, 1108, 1249, 1680
Tru1I TTAA 3 cut(s) 251, 1067, 1569
Tru9I TTAA 3 cut(s) 251, 1067, 1569
TseFI GTSAC 3 cut(s) 829, 1229, 2015
TseI GCWGC 7 cut(s) 122, 599, 1414, 1754, 1781, 1784, 1811
Tsp45I GTSAC 3 cut(s) 829, 1229, 2015
TspDTI ATGAA 4 cut(s) 275, 302, 588, 1211
TspGWI ACGGA 1 cut(s) 425
Tth111I GACNNNGTC 2 cut(s) 827, 1855
Van91I CCANNNNNTGG 1 cut(s) 595
Vha464I CTTAAG 1 cut(s) 1066
VpaK11BI GGWCC 4 cut(s) 401, 440, 1047, 1326
XapI RAATTY 1 cut(s) 625
XbaI TCTAGA 1 cut(s) 206
XceI RCATGY 2 cut(s) 1262, 1940
XmiI GTMKAC 1 cut(s) 822
XmnI GAANNNNTTC 1 cut(s) 613
XspI CTAG 3 cut(s) 207, 1590, 2010
Zsp2I ATGCAT 5 cut(s) 1264, 1291, 1302, 1369, 1625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.