Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011959

Physical Location & Seq

Genomic Coordinates Forward (+)

19096413 .. 19100373

Gene Structure 3961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G46520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2919 bp

ATGGAGTGGAATCGGGAGACTCTAGTGTTCCTTTCGCAATGTTTTCTTAACACGCTCTCTCCGATACCGGAGCCTCGTCGAACGGCTGAGAGAGCACTCTCGGATGCTGCTGATCAGGCTAACTACGGCCTAGCCGTTCTCCGTTTGGTGGCTGAGCCAGCAATCGATGAACAGACGCGTCACGCCGCTGCTGTCAACTTTAAGAACCATCTCCGTTCGCGATGGCATCCTGCTGGTGATTCTGGTATCTCACCGATCGTAGATTCTGAGAAGGAGCAGATCAAGACACTCATCGTCTCTCTTATGCTCTCTGCTTCTCCTCGTATCCAGAGCCAGTTGAGTGAAGCCCTAACCGTCATTGGTAAGCACGATTTCCCCAAAGCTTGGCCTGCTTTGCTTCCTGAGCTTATCGCCAACCTTCAAAACGCTGCTCTCGCTGGCGATTATGTGTCCGTCAATGGTATTCTTGGGACCGCTAGTTCGATTTTCAAAAAGTTTAGTTATGAGTATAGAACCGATGCTCTGTTTGTTGATTTGAAGTATTGCCTGGATAATTTTGCTGCTCCTTTGACTGAAATATTCCTGAAAACGTCTTCGTTGATTGATTCTGCTGCGAGCTCTGGTGGTTCACCTCCGATCCTGAAGCCTCTCTTCGAGTCCCAAAGGCTGTGCTGTACAATATTTTACTCTTTGAACTTTCAGGACTTACCGGAGTTTTTCGAGGATCATATGAAGGAGTGGATGGGAGAGTTTAAGAAGTATCTATCTTCAAATTATCCCGCCTTGGAAAGCACAGAGGAGGGGTTAACACTTGTTGATGATCTTCGCGCTGCTATTTGCGAGAATATCAATCATTATATTGAGAAAAACGAAGAAGAGTTTCAAGGCTTTTTGAATGAGTTTGCATCAGTTGTCTGGACATTGCTCCGGGATGTGTCAAAGTCTCCTAGCAGAGATCAACTAGCTACTACAGCAATCAAGTTCTTGACCTCTGTGAGCACAAGTGTTCACCATGCTTTGTTTGCGGGGGACAATGTTATCAAGGAAATTTGCCAAAGTATTGTGATTCCTAATGTTTCTTTGAGGGTGGAAGATGAAGAAATTTTCGAGATGAACTATATTGAGTTTATCCGTAGAGATATGGAAGGAAGTGATGTGGACACTAGAAGGAGAATAGCTTGTGAGCTACTCAAAGGCCTTGCCACAAACTACAAAACACAAGTGACAGAAGTAGTTTCTCTTGAGATACAGAGGCTCTTGAGTTCATTTTCAGCAAACCCGTCGGCAAACTGGAAAGATAAGGATTGTGCAATTTACTTGGTTGTCTCTCTATCTACTAAGAAGGCAGGGGGTGCATCTGTGTCTACAGATCTCATTGATGTTCAAAACTTCTTTGCAAACATTATTCTCCCGGAGCTGCAAAGCCGCGATGTCAACAGCTTTCCAATGCTAAAGGCAGGGTCCTTGAAGTTCTTAACTATGTTTCGTAGTCATATACCAAAGCCCTTTGCAATGCAGTTGTTCCCAGAGTTGGTCCGTTTCCTTAAAGCAGAGTCGAACGTGGTCCACTCTTATGCTGCTAGCTGCATAGAGAAGCTCTTGCTAGTGAAGGAGGAAGGCGCAAGGGGTAATAGGTATGCTGCTGGTGATTTAAGTCCCTTTTTGCTGCAGTTGATGACAAACCTGTTTGATGCGCTGAAATTCCCAGAATCAGAGGAGAATCAATATCTGATGAAGTGTATAATGCGGGTCCTTGGTGTTGCTGATATCAGTGCTGAGGTTGCTGGACCTTGCATCGGGGGATTGACCTCTATTCTCAGTGAAGTTTGCAAAAATCCTAAAAATCCTATATTTAACCACTATCTCTTTGAGTCTGTGGCTGTACTTGTTCGACGGGCATGTGAACGTGATATTTCTCTTATATCTGCATTTGAAACGAGTCTTTTCCCAAGCCTCCAGATGATTTTGGCGAATGATATCACAGAGTTCTTGCCTTATGGGTTTCAGTTGCTGGCTCAGCTTGTTGAGTTAAATAGACCAACTCTCTCACCAAACTACATGCAGATCTTCTTGCTGCTCCTCTCGCCTGAGTCATGGAAGAGAAGTGGCAATGTTCCAGCTCTTGTGCGCCTGCTTCAAGCTTTTCTGCAGAAAGCACCTCATGAGGTTACTCAAGAGAATCGGTTGAGTCAAGTTCTGGGGATATTTGAAAAGCTGGTTGCATCTCCTAGCACGGATGAGCAAGGCTTTTATATCCTTAACACGATTATTGAGAATCTGGACTACAGTGTGATTGCACCTTACATGAAAGGTGTATGGAGTGCTCTATTCACACGCGTTCAAAACAAAAAGACAGTCAAGTTCCAGAAGTCGCTAGTAATATTCATGTCGCTTTTCTTGGTGAAGCATGGACAGGCTTATCTAGTGGAGACTATGAATACTGTTCAGCCAAACATCATCACTGCTATCGTGGAGCATTTCTGGATTCCGAACCTGAAACTGATCATGGGGAGTATGGAGGTCAAGTTAACGGCAGTTGCTGCAACTAGACTCATATGTGAGACTCCGGCTCTCCTGGATCCATCAGCTGCTAAACTCTGGGGGAAGATGCTTGATAGCATAGTGACGCTTGTTTCCAGGCCTGAGCAAGAAAGGGTACTTGATGAACCTGAAATGCCAGAAATCTCAGAGAATGTTGGATACACAGCTGCATTTGTGAAACTCCACAATGCTGGGAAAAAAGAAGAGGATCCTCTGAAAGACATCAAGGACCCAAAACAGTTCTTGGTCGCTTCTGTTTCGAGGCTTTCTTCTGCTTCTCCTGGTAGGTACCCACAGATAATTGGTGAGAATCTTGAACAAGCAAACCAAACAGCTTTGATCCAGCTCTGCAATGCTTACAACTGTGGAATTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005829 GO:0005911 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0009506 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0030054 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051168 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAS_CSE1 Cse1 IBN_N

Protein Analysis

972

Amino Acids

108.66

Weight (kDa)

5.43

Isoelectric Point (pI)

47.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	29 - 104	1.9e-13	Importin-beta N-terminal domain
Cse1	PF08506	162 - 530	1.1e-146	Cse1
CAS_CSE1	PF03378	531 - 962	1.4e-171	CAS/CSE protein, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46520
fragaria_vesca	FvH4_7g16830 FvH4_7g16830
malus_domestica	MD01G1083100.v1.1
prunus_persica	Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360031
rosa_laevigata	RLG00000027837
rosa_multiflora	Rmu_co8506667.1_g000001 Rmu_ssc0000368.1_g000034
rosa_roxburghii	Rroxscaffold_4G00296440
rosa_rugosa	Rorug01G0274600
rosa_samantha	Rh1AG288500 Rh1BG254000 Rh1CG271500 Rh1DG283100
rosa_wichuraiana	Rw1G025580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2829
AccB1I	GGYRCC	1 cut(s)	2829
AccB7I	CCANNNNNTGG	1 cut(s)	384
AccI	GTMKAC	1 cut(s)	1364
AccII	CGCG	5 cut(s)	178, 220, 828, 1428, 2337
AciI	CCGC	6 cut(s)	186, 474, 780, 1025, 1426, 1747
AclWI	GGATC	7 cut(s)	631, 732, 2573, 2586, 2744, 2757, 2875
AcsI	RAATTY	3 cut(s)	1047, 1101, 1700
AcuI	CTGAAG	1 cut(s)	662
AfaI	GTAC	4 cut(s)	676, 1884, 2658, 2831
AfiI	CCNNNNNNNGG	4 cut(s)	148, 384, 1531, 1796
AflIII	ACRYGT	2 cut(s)	176, 2335
AjnI	CCWGG	4 cut(s)	546, 2574, 2636, 2821
AloI	GAACNNNNNNTCC	2 cut(s)	463, 495
Alw21I	GWGCWC	4 cut(s)	97, 620, 1001, 2326
Alw26I	GTCTC	6 cut(s)	11, 301, 948, 1330, 2423, 2555
AlwI	GGATC	7 cut(s)	631, 732, 2573, 2586, 2744, 2757, 2875
AlwNI	CAGNNNCTG	2 cut(s)	2011, 2540
AoxI	GGCC	4 cut(s)	127, 386, 1195, 2639
ApoI	RAATTY	3 cut(s)	1047, 1101, 1700
ArsI	GACNNNNNNTTYG	4 cut(s)	463, 495, 2340, 2372
Asp700I	GAANNNNTTC	1 cut(s)	879
Asp718I	GGTACC	1 cut(s)	2829
AspLEI	GCGC	4 cut(s)	830, 1622, 1696, 2130
AspS9I	GGNCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
AsuC2I	CCSGG	2 cut(s)	929, 1412
AsuHPI	GGTGA	8 cut(s)	243, 248, 621, 1001, 1658, 2040, 2413, 2858
AsuNHI	GCTAGC	1 cut(s)	1580
AvaII	GGWCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
BamHI	GGATCC	2 cut(s)	2578, 2749
BanI	GGYRCC	1 cut(s)	2829
BanII	GRGCYC	1 cut(s)	620
BbsI	GAAGAC	1 cut(s)	585
Bbv12I	GWGCWC	4 cut(s)	97, 620, 1001, 2326
BbvCI	CCTCAGC	1 cut(s)	1776
BccI	CCATC	4 cut(s)	216, 216, 736, 2590
BceAI	ACGGC	4 cut(s)	99, 119, 142, 2547
BcgI	CGANNNNNNTGC	2 cut(s)	1263, 1297
BciT130I	CCWGG	4 cut(s)	548, 2576, 2638, 2823
BciVI	GTATCC	2 cut(s)	335, 2693
BclI	TGATCA	2 cut(s)	112, 2502
BcnI	CCSGG	2 cut(s)	929, 1412
BcoDI	GTCTC	6 cut(s)	11, 301, 948, 1330, 2423, 2555
BfmI	CTRYAG	5 cut(s)	969, 1365, 1667, 2147, 2284
BfuI	GTATCC	2 cut(s)	335, 2693
BglII	AGATCT	2 cut(s)	1369, 2064
BlpI	GCTNAGC	2 cut(s)	153, 2016
Bme1390I	CCNGG	6 cut(s)	548, 929, 1412, 2576, 2638, 2823
Bme18I	GGWCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
BmgT120I	GGNCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
BmiI	GGNNCC	8 cut(s)	72, 472, 1462, 1751, 2580, 2751, 2772, 2831
BmrFI	CCNGG	6 cut(s)	548, 929, 1412, 2576, 2638, 2823
BmsI	GCATC	9 cut(s)	94, 235, 508, 914, 1364, 1681, 1803, 2231, 2598
BmtI	GCTAGC	1 cut(s)	1584
BpiI	GAAGAC	1 cut(s)	585
BpmI	CTGGAG	1 cut(s)	1940
Bpu10I	CCTNAGC	3 cut(s)	402, 1776, 2643
Bpu1102I	GCTNAGC	2 cut(s)	153, 2016
BpuEI	CTTGAG	3 cut(s)	1262, 1279, 2157
BpuMI	CCSGG	2 cut(s)	929, 1412
Bsa29I	ATCGAT	1 cut(s)	165
BsaJI	CCNNGG	2 cut(s)	783, 1753
BsaWI	WCCGGW	2 cut(s)	67, 709
BsaXI	ACNNNNNCTCC	4 cut(s)	43, 73, 2510, 2540
Bsc4I	CCNNNNNNNGG	4 cut(s)	148, 384, 1531, 1796
Bse1I	ACTGG	2 cut(s)	334, 1295
Bse3DI	GCAATG	5 cut(s)	44, 920, 1518, 2116, 2899
BseBI	CCWGG	4 cut(s)	548, 2576, 2638, 2823
BseCI	ATCGAT	1 cut(s)	165
BseDI	CCNNGG	2 cut(s)	783, 1753
BseGI	GGATG	5 cut(s)	109, 226, 747, 937, 2242
BseLI	CCNNNNNNNGG	4 cut(s)	148, 384, 1531, 1796
BseMI	GCAATG	5 cut(s)	44, 920, 1518, 2116, 2899
BseNI	ACTGG	2 cut(s)	334, 1295
BseRI	GAGGAG	4 cut(s)	309, 812, 1730, 2069
BseYI	CCCAGC	1 cut(s)	2732
Bsh1236I	CGCG	5 cut(s)	178, 220, 828, 1428, 2337
Bsh1285I	CGRYCG	1 cut(s)	258
BshFI	GGCC	4 cut(s)	129, 388, 1197, 2641
BshNI	GGYRCC	1 cut(s)	2829
BshVI	ATCGAT	1 cut(s)	165
BsiEI	CGRYCG	1 cut(s)	258
BsiHKAI	GWGCWC	4 cut(s)	97, 620, 1001, 2326
BsiSI	CCGG	5 cut(s)	68, 710, 928, 1412, 2567
BslFI	GGGAC	4 cut(s)	484, 643, 1043, 1641
BslI	CCNNNNNNNGG	4 cut(s)	148, 384, 1531, 1796
BsmAI	GTCTC	6 cut(s)	11, 301, 948, 1330, 2423, 2555
BsmBI	CGTCTC	1 cut(s)	301
BsmFI	GGGAC	4 cut(s)	484, 643, 1043, 1641
BsnI	GGCC	4 cut(s)	129, 388, 1197, 2641
Bsp1286I	GDGCHC	4 cut(s)	97, 620, 1001, 2326
Bsp1407I	TGTACA	1 cut(s)	674
Bsp1720I	GCTNAGC	2 cut(s)	153, 2016
Bsp68I	TCGCGA	1 cut(s)	220
BspACI	CCGC	6 cut(s)	186, 474, 780, 1025, 1426, 1747
BspANI	GGCC	4 cut(s)	129, 388, 1197, 2641
BspDI	ATCGAT	1 cut(s)	165
BspFNI	CGCG	5 cut(s)	178, 220, 828, 1428, 2337
BspHI	TCATGA	1 cut(s)	2161
BspLI	GGNNCC	8 cut(s)	72, 472, 1462, 1751, 2580, 2751, 2772, 2831
BspMAI	CTGCAG	2 cut(s)	1671, 2151
BspOI	GCTAGC	1 cut(s)	1584
BspPI	GGATC	7 cut(s)	631, 732, 2573, 2586, 2744, 2757, 2875
BspT107I	GGYRCC	1 cut(s)	2829
BsrDI	GCAATG	5 cut(s)	44, 920, 1518, 2116, 2899
BsrGI	TGTACA	1 cut(s)	674
BsrI	ACTGG	2 cut(s)	334, 1295
BssECI	CCNNGG	2 cut(s)	783, 1753
BssT1I	CCWWGG	2 cut(s)	783, 1753
Bst2UI	CCWGG	4 cut(s)	548, 2576, 2638, 2823
Bst4CI	ACNGT	6 cut(s)	355, 2288, 2356, 2443, 2781, 2906
Bst6I	CTCTTC	4 cut(s)	656, 870, 2093, 2739
BstAPI	GCANNNNNTGC	2 cut(s)	1352, 2540
BstAUI	TGTACA	1 cut(s)	674
BstC8I	GCNNGC	7 cut(s)	159, 390, 439, 616, 1582, 2013, 2132
BstF5I	GGATG	5 cut(s)	109, 226, 747, 937, 2242
BstFNI	CGCG	5 cut(s)	178, 220, 828, 1428, 2337
BstHHI	GCGC	4 cut(s)	830, 1622, 1696, 2130
BstMAI	GTCTC	6 cut(s)	11, 301, 948, 1330, 2423, 2555
BstMCI	CGRYCG	1 cut(s)	258
BstNI	CCWGG	4 cut(s)	548, 2576, 2638, 2823
BstNSI	RCATGY	2 cut(s)	1902, 2062
BstSCI	CCNGG	6 cut(s)	546, 927, 1410, 2574, 2636, 2821
BstSFI	CTRYAG	5 cut(s)	969, 1365, 1667, 2147, 2284
BstUI	CGCG	5 cut(s)	178, 220, 828, 1428, 2337
BstV2I	GAAGAC	1 cut(s)	585
BstX2I	RGATCY	4 cut(s)	1369, 2064, 2578, 2749
BstXI	CCANNNNNNTGG	1 cut(s)	2732
BstYI	RGATCY	4 cut(s)	1369, 2064, 2578, 2749
Bsu15I	ATCGAT	1 cut(s)	165
BsuI	GTATCC	2 cut(s)	335, 2693
BsuRI	GGCC	4 cut(s)	129, 388, 1197, 2641
BsuTUI	ATCGAT	1 cut(s)	165
BtgZI	GCGATG	2 cut(s)	235, 1443
BtsCI	GGATG	5 cut(s)	109, 226, 747, 937, 2242
BtsI	GCAGTG	1 cut(s)	2460
BtsIMutI	CAGTG	4 cut(s)	1777, 1825, 2293, 2460
BtuMI	TCGCGA	1 cut(s)	220
Cac8I	GCNNGC	7 cut(s)	159, 390, 439, 616, 1582, 2013, 2132
CaiI	CAGNNNCTG	2 cut(s)	2011, 2540
CciI	TCATGA	1 cut(s)	2161
CfoI	GCGC	4 cut(s)	830, 1622, 1696, 2130
Cfr13I	GGNCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
ClaI	ATCGAT	1 cut(s)	165
CseI	GACGC	3 cut(s)	167, 184, 2635
Csp6I	GTAC	4 cut(s)	675, 1883, 2657, 2830
CviAII	CATG	9 cut(s)	1013, 1899, 2059, 2094, 2162, 2305, 2386, 2408, 2506
CviQI	GTAC	4 cut(s)	675, 1883, 2657, 2830
Eam1104I	CTCTTC	4 cut(s)	656, 870, 2093, 2739
EarI	CTCTTC	4 cut(s)	656, 870, 2093, 2739
Ecl136II	GAGCTC	1 cut(s)	618
Eco130I	CCWWGG	2 cut(s)	783, 1753
Eco147I	AGGCCT	2 cut(s)	1197, 2641
Eco24I	GRGCYC	1 cut(s)	620
Eco32I	GATATC	2 cut(s)	1768, 1978
Eco47I	GGWCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
Eco53kI	GAGCTC	1 cut(s)	618
Eco57I	CTGAAG	1 cut(s)	662
EcoICRI	GAGCTC	1 cut(s)	618
EcoO109I	RGGNCCY	3 cut(s)	1461, 1750, 2770
EcoRII	CCWGG	4 cut(s)	546, 2574, 2636, 2821
EcoRV	GATATC	2 cut(s)	1768, 1978
EcoT14I	CCWWGG	2 cut(s)	783, 1753
EcoT38I	GRGCYC	1 cut(s)	620
ErhI	CCWWGG	2 cut(s)	783, 1753
Esp3I	CGTCTC	1 cut(s)	301
FaeI	CATG	9 cut(s)	1016, 1902, 2062, 2097, 2165, 2308, 2389, 2411, 2509
FalI	AAGNNNNNCTT	2 cut(s)	635, 667
FaqI	GGGAC	4 cut(s)	484, 643, 1043, 1641
FatI	CATG	9 cut(s)	1012, 1898, 2058, 2093, 2161, 2304, 2385, 2407, 2505
FauI	CCCGC	3 cut(s)	787, 1018, 1740
FauNDI	CATATG	2 cut(s)	729, 2555
FbaI	TGATCA	2 cut(s)	112, 2502
FblI	GTMKAC	1 cut(s)	1364
FokI	GGATG	5 cut(s)	116, 213, 754, 944, 2249
FriOI	GRGCYC	1 cut(s)	620
GlaI	GCGC	4 cut(s)	829, 1621, 1695, 2129
GsaI	CCCAGC	1 cut(s)	2736
GsuI	CTGGAG	1 cut(s)	1940
HaeIII	GGCC	4 cut(s)	129, 388, 1197, 2641
HapII	CCGG	5 cut(s)	68, 710, 928, 1412, 2567
HgaI	GACGC	3 cut(s)	167, 184, 2635
HhaI	GCGC	4 cut(s)	830, 1622, 1696, 2130
Hin1II	CATG	9 cut(s)	1016, 1902, 2062, 2097, 2165, 2308, 2389, 2411, 2509
Hin6I	GCGC	4 cut(s)	828, 1620, 1694, 2128
HinP1I	GCGC	4 cut(s)	828, 1620, 1694, 2128
HincII	GTYRAC	4 cut(s)	196, 807, 1435, 2529
HindII	GTYRAC	4 cut(s)	196, 807, 1435, 2529
HindIII	AAGCTT	2 cut(s)	381, 2139
HpaI	GTTAAC	2 cut(s)	807, 2529
HpaII	CCGG	5 cut(s)	68, 710, 928, 1412, 2567
HphI	GGTGA	8 cut(s)	243, 248, 621, 1001, 1658, 2040, 2413, 2858
Hpy188I	TCNGA	9 cut(s)	63, 103, 268, 636, 1714, 1731, 2490, 2689, 2757
Hpy99I	CGWCG	3 cut(s)	81, 1285, 1896
HpyAV	CCTTC	8 cut(s)	265, 428, 727, 1139, 1161, 1336, 1603, 1610
HpyCH4III	ACNGT	6 cut(s)	355, 2288, 2356, 2443, 2781, 2906
HpyCH4IV	ACGT	3 cut(s)	590, 1560, 1906
HpySE526I	ACGT	3 cut(s)	590, 1560, 1906
Hsp92II	CATG	9 cut(s)	1016, 1902, 2062, 2097, 2165, 2308, 2389, 2411, 2509
HspAI	GCGC	4 cut(s)	828, 1620, 1694, 2128
KpnI	GGTACC	1 cut(s)	2833
Ksp22I	TGATCA	2 cut(s)	112, 2502
KspAI	GTTAAC	2 cut(s)	807, 2529
LmnI	GCTCC	7 cut(s)	70, 274, 568, 930, 1414, 2082, 2473
LweI	GCATC	9 cut(s)	94, 235, 508, 914, 1364, 1681, 1803, 2231, 2598
MaeII	ACGT	3 cut(s)	590, 1560, 1906
MaeIII	GTNAC	4 cut(s)	179, 1222, 2167, 2623
MflI	RGATCY	4 cut(s)	1369, 2064, 2578, 2749
MhlI	GDGCHC	4 cut(s)	97, 620, 1001, 2326
MluCI	AATT	8 cut(s)	553, 772, 1047, 1101, 1311, 1700, 2841, 2910
MluI	ACGCGT	2 cut(s)	176, 2335
MlyI	GAGTC	9 cut(s)	13, 665, 1562, 1880, 1948, 2099, 2197, 2544, 2557
MmeI	TCCRAC	1 cut(s)	2677
MroXI	GAANNNNTTC	1 cut(s)	879
MslI	CAYNNNNRTG	1 cut(s)	1572
MspA1I	CMGCKG	3 cut(s)	188, 2588, 2708
MspI	CCGG	5 cut(s)	68, 710, 928, 1412, 2567
MspR9I	CCNGG	6 cut(s)	548, 929, 1412, 2576, 2638, 2823
MvaI	CCWGG	4 cut(s)	548, 2576, 2638, 2823
MvnI	CGCG	5 cut(s)	178, 220, 828, 1428, 2337
NciI	CCSGG	2 cut(s)	929, 1412
NdeI	CATATG	2 cut(s)	729, 2555
NheI	GCTAGC	1 cut(s)	1580
NlaIII	CATG	9 cut(s)	1016, 1902, 2062, 2097, 2165, 2308, 2389, 2411, 2509
NlaIV	GGNNCC	8 cut(s)	72, 472, 1462, 1751, 2580, 2751, 2772, 2831
NmuCI	GTSAC	3 cut(s)	179, 1222, 2623
NruI	TCGCGA	1 cut(s)	220
NspI	RCATGY	2 cut(s)	1902, 2062
PagI	TCATGA	1 cut(s)	2161
PceI	AGGCCT	2 cut(s)	1197, 2641
PcsI	WCGNNNNNNNCGW	2 cut(s)	59, 132
PdmI	GAANNNNTTC	1 cut(s)	879
PflMI	CCANNNNNTGG	1 cut(s)	384
PfoI	TCCNGGA	3 cut(s)	927, 1410, 2574
Ple19I	CGATCG	1 cut(s)	258
PleI	GAGTC	9 cut(s)	13, 664, 1561, 1879, 1947, 2098, 2196, 2544, 2557
PpsI	GAGTC	9 cut(s)	13, 664, 1561, 1879, 1947, 2098, 2196, 2544, 2557
PpuMI	RGGWCCY	3 cut(s)	1461, 1750, 2770
Psp124BI	GAGCTC	1 cut(s)	620
Psp5II	RGGWCCY	3 cut(s)	1461, 1750, 2770
Psp6I	CCWGG	4 cut(s)	546, 2574, 2636, 2821
PspFI	CCCAGC	1 cut(s)	2732
PspGI	CCWGG	4 cut(s)	546, 2574, 2636, 2821
PspN4I	GGNNCC	8 cut(s)	72, 472, 1462, 1751, 2580, 2751, 2772, 2831
PspPI	GGNCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
PspPPI	RGGWCCY	3 cut(s)	1461, 1750, 2770
PstI	CTGCAG	2 cut(s)	1671, 2151
PstNI	CAGNNNCTG	2 cut(s)	2011, 2540
PsuI	RGATCY	4 cut(s)	1369, 2064, 2578, 2749
PvuI	CGATCG	1 cut(s)	258
PvuII	CAGCTG	2 cut(s)	2588, 2708
RruI	TCGCGA	1 cut(s)	220
RsaI	GTAC	4 cut(s)	676, 1884, 2658, 2831
RsaNI	GTAC	4 cut(s)	675, 1883, 2657, 2830
RseI	CAYNNNNRTG	1 cut(s)	1572
SacI	GAGCTC	1 cut(s)	620
Sau96I	GGNCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
SchI	GAGTC	9 cut(s)	13, 665, 1562, 1880, 1948, 2099, 2197, 2544, 2557
ScrFI	CCNGG	6 cut(s)	548, 929, 1412, 2576, 2638, 2823
SduI	GDGCHC	4 cut(s)	97, 620, 1001, 2326
SfaNI	GCATC	9 cut(s)	94, 235, 508, 914, 1364, 1681, 1803, 2231, 2598
SfcI	CTRYAG	5 cut(s)	969, 1365, 1667, 2147, 2284
SinI	GGWCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
SmiMI	CAYNNNNRTG	1 cut(s)	1572
SmlI	CTYRAG	3 cut(s)	1241, 1258, 2172
SmoI	CTYRAG	3 cut(s)	1241, 1258, 2172
Sse9I	AATT	8 cut(s)	553, 772, 1047, 1101, 1311, 1700, 2841, 2910
SseBI	AGGCCT	2 cut(s)	1197, 2641
SsiI	CCGC	6 cut(s)	186, 474, 780, 1025, 1426, 1747
SspI	AATATT	3 cut(s)	579, 681, 2382
SstI	GAGCTC	1 cut(s)	620
StuI	AGGCCT	2 cut(s)	1197, 2641
StyD4I	CCNGG	6 cut(s)	546, 927, 1410, 2574, 2636, 2821
StyI	CCWWGG	2 cut(s)	783, 1753
TaaI	ACNGT	6 cut(s)	355, 2288, 2356, 2443, 2781, 2906
TaiI	ACGT	3 cut(s)	593, 1563, 1909
TaqI	TCGA	9 cut(s)	79, 165, 482, 654, 720, 1107, 1556, 1891, 2801
TasI	AATT	8 cut(s)	553, 772, 1047, 1101, 1311, 1700, 2841, 2910
TatI	WGTACW	2 cut(s)	674, 1882
TauI	GCSGC	2 cut(s)	188, 1428
TscAI	CASTG	4 cut(s)	1777, 1825, 2293, 2467
TseFI	GTSAC	3 cut(s)	179, 1222, 2623
Tsp45I	GTSAC	3 cut(s)	179, 1222, 2623
TspGWI	ACGGA	6 cut(s)	131, 203, 442, 1121, 1526, 2249
TspRI	CASTG	4 cut(s)	1777, 1825, 2293, 2467
Van91I	CCANNNNNTGG	1 cut(s)	384
VpaK11BI	GGWCC	7 cut(s)	471, 1461, 1534, 1564, 1750, 1787, 2770
XapI	RAATTY	3 cut(s)	1047, 1101, 1700
XceI	RCATGY	2 cut(s)	1902, 2062
XmiI	GTMKAC	1 cut(s)	1364
XmnI	GAANNNNTTC	1 cut(s)	879

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.