Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000368.1

Orthogroup ID

OG0011959

Physical Location & Seq

Genomic Coordinates Forward (+)

164590 .. 170110

Gene Structure 5521 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000368.1_g000034.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2991 bp

atggagtggaacccccaggacctccacactctctctcaatgcttcgtcaacaccctctctccctcgccggagcctcgccgccaagccgaggccatactcgccgatttctcccagaagcccaattacggcctcgccgtgctccgcctcgtcgccgagcccaacgtcgccgaggagatcggccaggccgcctccgtcaacttcaagaaccacctcaaggcccggtgggcccccgctcccaacaactcggacgagcccaggatcctcgacgccgagaaggaccagatcaaagccctaatcgtcaccctcatgctcaacgccacccccaaaatccagggccagctcagcgaagccctagtcctgatcggcaagcacgatttccccaggctctggcccactctgctcccggagctcatcggaagcctccacaaggcttcccaggccggcaactatgcttccgttaacggtattctcggcactgctaactccatttttaagaaatttcggtatgagtacaagaccaatgatcttttgtatgatttgaaatactgtttggataatttcgccggaaccctgttggaaattttcttgaaaacggctaatttgattgagtctgccgccaatgccggcggaggtaatgcggcggcgctcaagccgctgtttgagtctcagaggttgtgctgtaggattttcttctcgttgaattttcaggagttgcctgagtttttcgaggaccatatgaatgagtggatgactgagcaaaggaaatatctagccaatagttatccagcgcttgagaatagtgctgatgggcttgcggtggtggatgagttgcgcgcagcggtgtgtgagaatattaacctttatatggagaagaatgaggaagagtttcaagcttacttgaatggttttgcgctagctgtgtggaatttgttaacaactgtctctcaggcatcgagccgtgatcaactagccgttacagctattaagttcttgactaccgttagcacaagtgtgcatcataatctgtttgctggtgacggagtgataccccagatttgtcagggcattgtgatcccgaatgtgaggttgagggatgaggatgaggaactgtttgacatgaactacattgagttcatcaggagggatatggaaggcagtgatctcgataccaggaggaggattgcttgtgagcttcttaaagggattgctaccaattataaaccacaggttaccaacttggtttctgtacagatacagaatttgctgacctcttttgccgcaaacccatctgagaattggaaggataaggactgcgcaatatacttggttgtatcacttgctactaagagggctggtggcacttctgttacgactgatcttgttgatgttcagaacttctttgggacagtgattgttccagaactgcagagtcaggatgtgaatggatatccaatgcttaaggcgggcgcattgaaatttttcgcaatgttccggaatcatataccaaagcctatgacattacaattttttccagatttgattcggttccttcgtgcagagtccaatgtagttcactcttatgctgcaagttgtattgagaagcttttgctggtaaaggatgagggtggacaagcaagatatacttcagtagatatctctccagtgctgccacaactgatgaccaacctctttgaggctttgaaggttccagaatctgaggaaaatcaatatgtgatgaagtgtattatgcgagttctcggggttgcagacatatcccgtgagattgctggaccttgtattactgggttgacatcaatactcaacaaagcttgtgaaaaccccaagaatccagtatttaaccactatgtttttgagtctgtggctgtccttgtgaaacgagcatgcggcaaggatgcctctctcatatcgatttttgagataaaccttttccccagtatccagaagatattggtcgaagatgtgcaagagttctatccttatgcacttcagctgctggctcaacttgttgagttgaacaggccacccattccacagagttacatgcagatttttccaatgctgttgtctcctgactcgtggagaaaggcttccaatgtccctgctcttgtgcgtttgcttcaagcattccttcagaaggcaccccatgagctcaaccaagagggcaggttgagacaggtccttgagatttccaataagcttgtctcagcccgtagtactgatgaacagggtttctatgtgctaaatactgttgttgagagccttgattttaatgtgattgcgccttacattggtcagatttggagtgcacttttcacagttctccaaagcaggcagacaggaaagtttatcaagtgtctattgatttttatgtcactctttctggtcaaacatggctctacaaaccttgtcgattcagtgaatagcattcaggccaacctatttctgatgatcttggggcagttttggatacctaatcttacgcatattacaggagtcattgagactaagttgactgcagttgcatcagcccgacttctgtgtgaatctcaaatgcttctggatgctgcagctgttgagcactgggggaaactgcttaacagcattgtaacccttctttcacgaacagagcaggacagggttgaagaggatcctgaaatgcctgaattttcagaaaatgttggatattctgccacctttattcggctgcacaatgctgggaagactgaggatgatccgctgaaagatataagagatgcaaaggaatttttgaactacttcgtctctgcaacacttataactgccaaattgtttaagacttcgtgtggctatgaagatgagggcattttatcttcattgaatctccgtcagcatgcatttgtgagcaaccattactgtcttagtcaacggacaagacaccccatctcattggcggatggagacccagtcttccatcccatgagtgctgcctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005829 GO:0005911 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0009506 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0030054 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051168 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAS_CSE1 Cse1 IBN_N

Protein Analysis

996

Amino Acids

111.54

Weight (kDa)

5.47

Isoelectric Point (pI)

42.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46520
fragaria_vesca	FvH4_7g16830 FvH4_7g16830
malus_domestica	MD01G1083100.v1.1
prunus_persica	Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360031
rosa_laevigata	RLG00000027837
rosa_multiflora	Rmu_co8506667.1_g000001 Rmu_ssc0000368.1_g000034
rosa_roxburghii	Rroxscaffold_4G00296440
rosa_rugosa	Rorug01G0274600
rosa_samantha	Rh1AG288500 Rh1BG254000 Rh1CG271500 Rh1DG283100
rosa_wichuraiana	Rw1G025580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1218, 2816
Acc16I	TGCGCA	1 cut(s)	1315
Acc36I	ACCTGC	1 cut(s)	2175
AccB1I	GGYRCC	1 cut(s)	2158
AccB7I	CCANNNNNTGG	1 cut(s)	387
AccBSI	CCGCTC	1 cut(s)	233
AccII	CGCG	1 cut(s)	834
AccIII	TCCGGA	1 cut(s)	1491
AclWI	GGATC	6 cut(s)	253, 266, 1066, 2663, 2676, 2747
AcoI	YGGCCR	1 cut(s)	178
AcsI	RAATTY	8 cut(s)	497, 579, 700, 925, 1258, 1475, 2684, 2783
AcuI	CTGAAG	3 cut(s)	1629, 1991, 2135
AcyI	GRCGYC	1 cut(s)	267
AfaI	GTAC	3 cut(s)	512, 1248, 2236
AfeI	AGCGCT	1 cut(s)	789
AflII	CTTAAG	1 cut(s)	1457
AjnI	CCWGG	7 cut(s)	15, 180, 254, 330, 380, 435, 1169
AjuI	GAANNNNNNNTTGG	2 cut(s)	533, 565
AleI	CACNNNNGTG	1 cut(s)	1010
Alw21I	GWGCWC	5 cut(s)	141, 411, 2172, 2329, 2601
Alw26I	GTCTC	8 cut(s)	669, 946, 2091, 2185, 2227, 2516, 2806, 2952
Alw44I	GTGCAC	1 cut(s)	2325
AlwI	GGATC	6 cut(s)	253, 266, 1066, 2663, 2676, 2747
AlwNI	CAGNNNCTG	3 cut(s)	387, 1715, 2014
Ama87I	CYCGRG	1 cut(s)	1757
Aor13HI	TCCGGA	1 cut(s)	1491
Aor51HI	AGCGCT	1 cut(s)	789
ApaI	GGGCCC	1 cut(s)	229
ApaLI	GTGCAC	1 cut(s)	2325
ApeKI	GCWGC	8 cut(s)	836, 1583, 1666, 2011, 2585, 2588, 2725, 2984
ApoI	RAATTY	8 cut(s)	497, 579, 700, 925, 1258, 1475, 2684, 2783
ArsI	GACNNNNNNTTYG	2 cut(s)	339, 371
Asp700I	GAANNNNTTC	4 cut(s)	885, 1478, 2107, 2795
AspLEI	GCGC	8 cut(s)	646, 790, 834, 836, 913, 1316, 1469, 2302
AsuC2I	CCSGG	2 cut(s)	220, 404
AsuHPI	GGTGA	2 cut(s)	292, 1046
AsuNHI	GCTAGC	1 cut(s)	913
AvaI	CYCGRG	1 cut(s)	1757
AvaII	GGWCC	5 cut(s)	19, 277, 730, 1790, 2197
BaeGI	GKGCMC	2 cut(s)	229, 2329
BamHI	GGATCC	2 cut(s)	258, 2668
BanI	GGYRCC	1 cut(s)	2158
BanII	GRGCYC	5 cut(s)	159, 229, 255, 411, 2172
BarI	GAAGNNNNNNTAC	2 cut(s)	107, 139
BauI	CACGAG	1 cut(s)	2095
BbsI	GAAGAC	2 cut(s)	2747, 2959
Bbv12I	GWGCWC	5 cut(s)	141, 411, 2172, 2329, 2601
BbvI	GCAGC	8 cut(s)	848, 1570, 1653, 1998, 2572, 2600, 2712, 2971
BccI	CCATC	5 cut(s)	800, 1294, 2948, 2948, 2979
BceAI	ACGGC	5 cut(s)	119, 142, 609, 942, 956
BcgI	CGANNNNNNTGC	2 cut(s)	1144, 1178
BciT130I	CCWGG	7 cut(s)	17, 182, 256, 332, 382, 437, 1171
BciVI	GTATCC	2 cut(s)	1967, 2481
BclI	TGATCA	1 cut(s)	961
BcnI	CCSGG	2 cut(s)	220, 404
BcoDI	GTCTC	8 cut(s)	669, 946, 2091, 2185, 2227, 2516, 2806, 2952
BfaI	CTAG	5 cut(s)	353, 770, 914, 968, 2989
BfmI	CTRYAG	4 cut(s)	679, 1424, 2535, 2586
BfoI	RGCGCY	2 cut(s)	647, 791
BfrI	CTTAAG	1 cut(s)	1457
BfuAI	ACCTGC	1 cut(s)	2175
BfuI	GTATCC	2 cut(s)	1967, 2481
BglI	GCCNNNNNGGC	1 cut(s)	224
BlpI	GCTNAGC	1 cut(s)	341
BmcAI	AGTACT	1 cut(s)	2236
Bme1390I	CCNGG	9 cut(s)	17, 182, 220, 256, 332, 382, 404, 437, 1171
Bme18I	GGWCC	5 cut(s)	19, 277, 730, 1790, 2197
BmeT110I	CYCGRG	1 cut(s)	1757
BmrFI	CCNGG	9 cut(s)	17, 182, 220, 256, 332, 382, 404, 437, 1171
BmrI	ACTGGG	4 cut(s)	1812, 1947, 2611, 2957
BmsI	GCATC	6 cut(s)	959, 1024, 1903, 2552, 2572, 2764
BmtI	GCTAGC	1 cut(s)	917
BmuI	ACTGGG	4 cut(s)	1812, 1947, 2611, 2957
BpiI	GAAGAC	2 cut(s)	2747, 2959
BpmI	CTGGAG	1 cut(s)	1644
Bpu1102I	GCTNAGC	1 cut(s)	341
BpuEI	CTTGAG	4 cut(s)	197, 632, 812, 2222
BpuMI	CCSGG	2 cut(s)	220, 404
Bsa29I	ATCGAT	1 cut(s)	1928
BsaHI	GRCGYC	1 cut(s)	267
BsaI	GGTCTC	1 cut(s)	2952
BsaJI	CCNNGG	7 cut(s)	15, 87, 168, 254, 331, 380, 435
BsaWI	WCCGGW	1 cut(s)	1491
BsaXI	ACNNNNNCTCC	4 cut(s)	43, 73, 2949, 2979
Bse118I	RCCGGY	2 cut(s)	440, 623
Bse1I	ACTGG	6 cut(s)	1661, 1807, 1850, 1953, 2606, 2963
Bse3DI	GCAATG	1 cut(s)	1491
BseAI	TCCGGA	1 cut(s)	1491
BseBI	CCWGG	7 cut(s)	17, 182, 256, 332, 382, 437, 1171
BseCI	ATCGAT	1 cut(s)	1928
BseDI	CCNNGG	7 cut(s)	15, 87, 168, 254, 331, 380, 435
BseMI	GCAATG	1 cut(s)	1491
BseMII	CTCAG	9 cut(s)	355, 680, 708, 744, 959, 1281, 1707, 2238, 2736
BseNI	ACTGG	6 cut(s)	1661, 1807, 1850, 1953, 2606, 2963
BsePI	GCGCGC	1 cut(s)	832
BseRI	GAGGAG	2 cut(s)	185, 1189
BseSI	GKGCMC	2 cut(s)	229, 2329
BseXI	GCAGC	8 cut(s)	848, 1570, 1653, 1998, 2572, 2600, 2712, 2971
BseYI	CCCAGC	1 cut(s)	2735
BsgI	GTGCAG	2 cut(s)	1575, 2711
Bsh1236I	CGCG	1 cut(s)	834
BshNI	GGYRCC	1 cut(s)	2158
BshVI	ATCGAT	1 cut(s)	1928
BsiHKAI	GWGCWC	5 cut(s)	141, 411, 2172, 2329, 2601
BsiHKCI	CYCGRG	1 cut(s)	1757
BsiSI	CCGG	7 cut(s)	68, 220, 404, 441, 564, 624, 1492
BslFI	GGGAC	2 cut(s)	1417, 2102
BsmAI	GTCTC	8 cut(s)	669, 946, 2091, 2185, 2227, 2516, 2806, 2952
BsmBI	CGTCTC	1 cut(s)	2806
BsmFI	GGGAC	2 cut(s)	1417, 2102
BsmI	GAATGC	2 cut(s)	2144, 2445
Bso31I	GGTCTC	1 cut(s)	2952
BsoBI	CYCGRG	1 cut(s)	1757
Bsp120I	GGGCCC	1 cut(s)	225
Bsp1286I	GDGCHC	8 cut(s)	141, 159, 229, 255, 411, 2172, 2329, 2601
Bsp13I	TCCGGA	1 cut(s)	1491
Bsp1407I	TGTACA	1 cut(s)	1246
Bsp1720I	GCTNAGC	1 cut(s)	341
BspCNI	CTCAG	9 cut(s)	354, 679, 709, 745, 958, 1282, 1708, 2237, 2737
BspDI	ATCGAT	1 cut(s)	1928
BspEI	TCCGGA	1 cut(s)	1491
BspFNI	CGCG	1 cut(s)	834
BspMAI	CTGCAG	3 cut(s)	1428, 2539, 2590
BspMI	ACCTGC	1 cut(s)	2175
BspOI	GCTAGC	1 cut(s)	917
BspPI	GGATC	6 cut(s)	253, 266, 1066, 2663, 2676, 2747
BspT107I	GGYRCC	1 cut(s)	2158
BspTI	CTTAAG	1 cut(s)	1457
BspTNI	GGTCTC	1 cut(s)	2952
BsrBI	CCGCTC	1 cut(s)	233
BsrDI	GCAATG	1 cut(s)	1491
BsrFI	RCCGGY	2 cut(s)	440, 623
BsrGI	TGTACA	1 cut(s)	1246
BsrI	ACTGG	6 cut(s)	1661, 1807, 1850, 1953, 2606, 2963
BssAI	RCCGGY	2 cut(s)	440, 623
BssECI	CCNNGG	7 cut(s)	15, 87, 168, 254, 331, 380, 435
BssHII	GCGCGC	1 cut(s)	832
BssNI	GRCGYC	1 cut(s)	267
BssSI	CACGAG	1 cut(s)	2095
Bst2BI	CACGAG	1 cut(s)	2095
Bst2UI	CCWGG	7 cut(s)	17, 182, 256, 332, 382, 437, 1171
Bst4CI	ACNGT	9 cut(s)	464, 548, 940, 1000, 1110, 1408, 2269, 2338, 2915
Bst6I	CTCTTC	2 cut(s)	876, 2658
BstACI	GRCGYC	1 cut(s)	267
BstAFI	CTTAAG	1 cut(s)	1457
BstAUI	TGTACA	1 cut(s)	1246
BstEII	GGTNACC	1 cut(s)	1228
BstENI	CCTNNNNNAGG	3 cut(s)	425, 1691, 2153
BstFNI	CGCG	1 cut(s)	834
BstH2I	RGCGCY	2 cut(s)	647, 791
BstHHI	GCGC	8 cut(s)	646, 790, 834, 836, 913, 1316, 1469, 2302
BstMAI	GTCTC	8 cut(s)	669, 946, 2091, 2185, 2227, 2516, 2806, 2952
BstMWI	GCNNNNNNNGC	9 cut(s)	98, 224, 342, 397, 406, 437, 620, 652, 977
BstNI	CCWGG	7 cut(s)	17, 182, 256, 332, 382, 437, 1171
BstNSI	RCATGY	3 cut(s)	1905, 2065, 2894
BstPI	GGTNACC	1 cut(s)	1228
BstSCI	CCNGG	9 cut(s)	15, 180, 218, 254, 330, 380, 402, 435, 1169
BstSFI	CTRYAG	4 cut(s)	679, 1424, 2535, 2586
BstSLI	GKGCMC	2 cut(s)	229, 2329
BstUI	CGCG	1 cut(s)	834
BstV1I	GCAGC	8 cut(s)	848, 1570, 1653, 1998, 2572, 2600, 2712, 2971
BstV2I	GAAGAC	2 cut(s)	2747, 2959
BstX2I	RGATCY	2 cut(s)	258, 2668
BstXI	CCANNNNNNTGG	1 cut(s)	2947
BstYI	RGATCY	2 cut(s)	258, 2668
Bsu15I	ATCGAT	1 cut(s)	1928
BsuI	GTATCC	2 cut(s)	1967, 2481
BsuTUI	ATCGAT	1 cut(s)	1928
BtsI	GCAGTG	2 cut(s)	474, 1162
BtsIMutI	CAGTG	6 cut(s)	474, 1162, 1413, 1668, 2442, 2599
BveI	ACCTGC	1 cut(s)	2175
CaiI	CAGNNNCTG	3 cut(s)	387, 1715, 2014
CfoI	GCGC	8 cut(s)	646, 790, 834, 836, 913, 1316, 1469, 2302
Cfr10I	RCCGGY	2 cut(s)	440, 623
ClaI	ATCGAT	1 cut(s)	1928
CseI	GACGC	1 cut(s)	275
Csp6I	GTAC	3 cut(s)	511, 1247, 2235
CviAII	CATG	8 cut(s)	307, 1117, 1902, 2062, 2165, 2411, 2891, 2977
CviQI	GTAC	3 cut(s)	511, 1247, 2235
EaeI	YGGCCR	1 cut(s)	178
Eam1104I	CTCTTC	2 cut(s)	876, 2658
EarI	CTCTTC	2 cut(s)	876, 2658
EciI	GGCGGA	3 cut(s)	131, 642, 2966
Ecl136II	GAGCTC	2 cut(s)	409, 2170
Eco24I	GRGCYC	5 cut(s)	159, 229, 255, 411, 2172
Eco31I	GGTCTC	1 cut(s)	2952
Eco32I	GATATC	2 cut(s)	1448, 1654
Eco47I	GGWCC	5 cut(s)	19, 277, 730, 1790, 2197
Eco47III	AGCGCT	1 cut(s)	789
Eco53kI	GAGCTC	2 cut(s)	409, 2170
Eco57I	CTGAAG	3 cut(s)	1629, 1991, 2135
Eco88I	CYCGRG	1 cut(s)	1757
Eco91I	GGTNACC	1 cut(s)	1228
EcoICRI	GAGCTC	2 cut(s)	409, 2170
EcoNI	CCTNNNNNAGG	3 cut(s)	425, 1691, 2153
EcoO109I	RGGNCCY	3 cut(s)	19, 226, 2197
EcoO65I	GGTNACC	1 cut(s)	1228
EcoRII	CCWGG	7 cut(s)	15, 180, 254, 330, 380, 435, 1169
EcoRV	GATATC	2 cut(s)	1448, 1654
EcoT22I	ATGCAT	1 cut(s)	2896
EcoT38I	GRGCYC	5 cut(s)	159, 229, 255, 411, 2172
Esp3I	CGTCTC	1 cut(s)	2806
FaeI	CATG	8 cut(s)	310, 1120, 1905, 2065, 2168, 2414, 2894, 2980
FalI	AAGNNNNNCTT	4 cut(s)	1627, 1659, 2133, 2165
FaqI	GGGAC	2 cut(s)	1417, 2102
FatI	CATG	8 cut(s)	306, 1116, 1901, 2061, 2164, 2410, 2890, 2976
FauI	CCCGC	2 cut(s)	238, 1456
FauNDI	CATATG	1 cut(s)	735
FbaI	TGATCA	1 cut(s)	961
FriOI	GRGCYC	5 cut(s)	159, 229, 255, 411, 2172
FspBI	CTAG	5 cut(s)	353, 770, 914, 968, 2989
FspI	TGCGCA	1 cut(s)	1315
GlaI	GCGC	8 cut(s)	645, 789, 833, 835, 912, 1315, 1468, 2301
GsaI	CCCAGC	1 cut(s)	2739
GsuI	CTGGAG	1 cut(s)	1644
HaeII	RGCGCY	2 cut(s)	647, 791
HapII	CCGG	7 cut(s)	68, 220, 404, 441, 564, 624, 1492
HgaI	GACGC	1 cut(s)	275
HhaI	GCGC	8 cut(s)	646, 790, 834, 836, 913, 1316, 1469, 2302
Hin1I	GRCGYC	1 cut(s)	267
Hin1II	CATG	8 cut(s)	310, 1120, 1905, 2065, 2168, 2414, 2894, 2980
Hin6I	GCGC	8 cut(s)	644, 788, 832, 834, 911, 1314, 1467, 2300
HinP1I	GCGC	8 cut(s)	644, 788, 832, 834, 911, 1314, 1467, 2300
HincII	GTYRAC	7 cut(s)	49, 196, 460, 933, 1809, 2532, 2924
HindII	GTYRAC	7 cut(s)	49, 196, 460, 933, 1809, 2532, 2924
HindIII	AAGCTT	4 cut(s)	891, 1601, 1827, 2216
HpaI	GTTAAC	2 cut(s)	460, 933
HpaII	CCGG	7 cut(s)	68, 220, 404, 441, 564, 624, 1492
HphI	GGTGA	2 cut(s)	292, 1046
Hpy99I	CGWCG	3 cut(s)	152, 167, 269
HpyAV	CCTTC	8 cut(s)	268, 1145, 1294, 1559, 1696, 2149, 2159, 2642
HpyCH4III	ACNGT	9 cut(s)	464, 548, 940, 1000, 1110, 1408, 2269, 2338, 2915
HpyCH4IV	ACGT	1 cut(s)	162
HpyF10VI	GCNNNNNNNGC	9 cut(s)	98, 224, 342, 397, 406, 437, 620, 652, 977
HpySE526I	ACGT	1 cut(s)	162
Hsp92I	GRCGYC	1 cut(s)	267
Hsp92II	CATG	8 cut(s)	310, 1120, 1905, 2065, 2168, 2414, 2894, 2980
HspAI	GCGC	8 cut(s)	644, 788, 832, 834, 911, 1314, 1467, 2300
Kpn2I	TCCGGA	1 cut(s)	1491
KroI	GCCGGC	2 cut(s)	440, 623
KroNI	GCCGGC	2 cut(s)	442, 625
Ksp22I	TGATCA	1 cut(s)	961
KspAI	GTTAAC	2 cut(s)	460, 933
LmnI	GCTCC	5 cut(s)	70, 144, 238, 405, 406
Lsp1109I	GCAGC	8 cut(s)	848, 1570, 1653, 1998, 2572, 2600, 2712, 2971
LweI	GCATC	6 cut(s)	959, 1024, 1903, 2552, 2572, 2764
MaeI	CTAG	5 cut(s)	353, 770, 914, 968, 2989
MaeII	ACGT	1 cut(s)	162
MaeIII	GTNAC	8 cut(s)	298, 973, 1034, 1228, 1366, 2057, 2391, 2626
MbiI	CCGCTC	1 cut(s)	233
MflI	RGATCY	2 cut(s)	258, 2668
MhlI	GDGCHC	8 cut(s)	141, 159, 229, 255, 411, 2172, 2329, 2601
MlyI	GAGTC	7 cut(s)	617, 671, 1438, 1568, 1883, 2087, 2523
MmeI	TCCRAC	2 cut(s)	555, 2680
Mph1103I	ATGCAT	1 cut(s)	2896
MroI	TCCGGA	1 cut(s)	1491
MroNI	GCCGGC	2 cut(s)	440, 623
MroXI	GAANNNNTTC	4 cut(s)	885, 1478, 2107, 2795
MslI	CAYNNNNRTG	4 cut(s)	305, 738, 1010, 1578
MspA1I	CMGCKG	5 cut(s)	655, 839, 2011, 2591, 2758
MspCI	CTTAAG	1 cut(s)	1457
MspI	CCGG	7 cut(s)	68, 220, 404, 441, 564, 624, 1492
MspR9I	CCNGG	9 cut(s)	17, 182, 220, 256, 332, 382, 404, 437, 1171
Mva1269I	GAATGC	2 cut(s)	2144, 2445
MvaI	CCWGG	7 cut(s)	17, 182, 256, 332, 382, 437, 1171
MvnI	CGCG	1 cut(s)	834
MwoI	GCNNNNNNNGC	9 cut(s)	98, 224, 342, 397, 406, 437, 620, 652, 977
NaeI	GCCGGC	2 cut(s)	442, 625
NciI	CCSGG	2 cut(s)	220, 404
NdeI	CATATG	1 cut(s)	735
NgoMIV	GCCGGC	2 cut(s)	440, 623
NheI	GCTAGC	1 cut(s)	913
NlaIII	CATG	8 cut(s)	310, 1120, 1905, 2065, 2168, 2414, 2894, 2980
NmeAIII	GCCGAG	5 cut(s)	112, 178, 193, 295, 450
NmuCI	GTSAC	3 cut(s)	298, 1034, 2391
NsbI	TGCGCA	1 cut(s)	1315
NsiI	ATGCAT	1 cut(s)	2896
NspI	RCATGY	3 cut(s)	1905, 2065, 2894
OliI	CACNNNNGTG	1 cut(s)	1010
PaeI	GCATGC	2 cut(s)	1905, 2894
PauI	GCGCGC	1 cut(s)	832
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 369, 1549
PctI	GAATGC	2 cut(s)	2144, 2445
PdiI	GCCGGC	2 cut(s)	442, 625
PdmI	GAANNNNTTC	4 cut(s)	885, 1478, 2107, 2795
PfeI	GAWTC	7 cut(s)	1495, 1540, 1712, 1846, 2432, 2564, 2878
PflFI	GACNNNGTC	1 cut(s)	2963
PflMI	CCANNNNNTGG	1 cut(s)	387
PfoI	TCCNGGA	1 cut(s)	402
PleI	GAGTC	7 cut(s)	616, 670, 1437, 1567, 1882, 2087, 2522
PpsI	GAGTC	7 cut(s)	616, 670, 1437, 1567, 1882, 2087, 2522
PpuMI	RGGWCCY	2 cut(s)	19, 2197
PsiI	TTATAA	2 cut(s)	1218, 2816
Psp124BI	GAGCTC	2 cut(s)	411, 2172
Psp5II	RGGWCCY	2 cut(s)	19, 2197
Psp6I	CCWGG	7 cut(s)	15, 180, 254, 330, 380, 435, 1169
PspEI	GGTNACC	1 cut(s)	1228
PspFI	CCCAGC	1 cut(s)	2735
PspGI	CCWGG	7 cut(s)	15, 180, 254, 330, 380, 435, 1169
PspOMI	GGGCCC	1 cut(s)	225
PspPPI	RGGWCCY	2 cut(s)	19, 2197
PstI	CTGCAG	3 cut(s)	1428, 2539, 2590
PstNI	CAGNNNCTG	3 cut(s)	387, 1715, 2014
PsuI	RGATCY	2 cut(s)	258, 2668
PsyI	GACNNNGTC	1 cut(s)	2963
PteI	GCGCGC	1 cut(s)	832
PvuII	CAGCTG	2 cut(s)	2011, 2591
RsaI	GTAC	3 cut(s)	512, 1248, 2236
RsaNI	GTAC	3 cut(s)	511, 1247, 2235
RseI	CAYNNNNRTG	4 cut(s)	305, 738, 1010, 1578
SacI	GAGCTC	2 cut(s)	411, 2172
ScaI	AGTACT	1 cut(s)	2236
SchI	GAGTC	7 cut(s)	617, 671, 1438, 1568, 1883, 2087, 2523
ScrFI	CCNGG	9 cut(s)	17, 182, 220, 256, 332, 382, 404, 437, 1171
SduI	GDGCHC	8 cut(s)	141, 159, 229, 255, 411, 2172, 2329, 2601
SfaNI	GCATC	6 cut(s)	959, 1024, 1903, 2552, 2572, 2764
SfcI	CTRYAG	4 cut(s)	679, 1424, 2535, 2586
SfiI	GGCCNNNNNGGCC	1 cut(s)	224
SinI	GGWCC	5 cut(s)	19, 277, 730, 1790, 2197
SmiMI	CAYNNNNRTG	4 cut(s)	305, 738, 1010, 1578
SmlI	CTYRAG	5 cut(s)	212, 647, 791, 1457, 2201
SmoI	CTYRAG	5 cut(s)	212, 647, 791, 1457, 2201
SphI	GCATGC	2 cut(s)	1905, 2894
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	5 cut(s)	353, 770, 914, 968, 2989
SstI	GAGCTC	2 cut(s)	411, 2172
StyD4I	CCNGG	9 cut(s)	15, 180, 218, 254, 330, 380, 402, 435, 1169
TaaI	ACNGT	9 cut(s)	464, 548, 940, 1000, 1110, 1408, 2269, 2338, 2915
TaiI	ACGT	1 cut(s)	165
TaqI	TCGA	7 cut(s)	264, 726, 953, 1164, 1928, 1974, 2430
TatI	WGTACW	3 cut(s)	510, 1246, 2234
TauI	GCSGC	8 cut(s)	81, 188, 617, 641, 644, 655, 1280, 1908
TfiI	GAWTC	7 cut(s)	1495, 1540, 1712, 1846, 2432, 2564, 2878
TscAI	CASTG	6 cut(s)	481, 1162, 1413, 1668, 2442, 2606
TseFI	GTSAC	3 cut(s)	298, 1034, 2391
TseI	GCWGC	8 cut(s)	836, 1583, 1666, 2011, 2585, 2588, 2725, 2984
Tsp45I	GTSAC	3 cut(s)	298, 1034, 2391
TspDTI	ATGAA	7 cut(s)	752, 1123, 1133, 1751, 2256, 2862, 2865
TspGWI	ACGGA	5 cut(s)	181, 445, 1053, 2873, 2941
TspRI	CASTG	6 cut(s)	481, 1162, 1413, 1668, 2442, 2606
Tth111I	GACNNNGTC	1 cut(s)	2963
Van91I	CCANNNNNTGG	1 cut(s)	387
Vha464I	CTTAAG	1 cut(s)	1457
VneI	GTGCAC	1 cut(s)	2325
VpaK11BI	GGWCC	5 cut(s)	19, 277, 730, 1790, 2197
XagI	CCTNNNNNAGG	3 cut(s)	425, 1691, 2153
XapI	RAATTY	8 cut(s)	497, 579, 700, 925, 1258, 1475, 2684, 2783
XceI	RCATGY	3 cut(s)	1905, 2065, 2894
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1293
XmnI	GAANNNNTTC	4 cut(s)	885, 1478, 2107, 2795
XspI	CTAG	5 cut(s)	353, 770, 914, 968, 2989
ZrmI	AGTACT	1 cut(s)	2236
Zsp2I	ATGCAT	1 cut(s)	2896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.