Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0011959

Physical Location & Seq

Genomic Coordinates Reverse (-)

16500538 .. 16505540

Gene Structure 5003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00296440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2919 bp

ATGGAGTGGAACCCCCAGGACCTCCACACTCTCTCTCAGTGCTTCGTCAACACCCTCTCTCCCTCGCCGGAGCCTCGCCGCCAAGCCGAGGCCATACTCGCCGATTTCTCCCAGAAGCCCAATTACGGCCTCGCCGTGCTCCGCCTCGTCGCCGAGCCCAACGTCGCCGAGGAGATCCGCCAGGCCGCCTCCGTCAACTTCAAGAACCACCTCAAGGCCCGGTGGGCCCCCGCCCCCAACTCCGACGAGCCCGGGATCCTCGACGCCGAGAAGGACCAGATCAAAGCCCTAATCGTCACGCTCATGCTCAACGCCACCCCCAAAATCCAGGGCCAGCTCAGCGAAGCCCTAGTCCTCATCGGCAAGCACGATTTCCCCAGGCTCTGGCCCACTCTGCTCCCCGAGCTCATCGGAAGCCTCCACAAGGCTTCCCAGGCCGGCGCCTATGCTTCCGTTAACGGTATTCTCGGCACTGCTAACTCTATTTTTAAGAAATTTCGGTATGAGTACAAGACCACCGATCTTTTGTATGATTTGAAATACTGTTTGGATAATTTCGCCGGAACCCTATTGGAAATTTTCTTGAAAACGGCTAATTTGATTGAGTCTGCCCCCAATGCCGGCGGAGGTAATGCGGCGGCGCTCAAGCCGCTGTTTGAGTCTCAGAGGTTGTGCTGTAGGATTTTCTTCTCGTTGAATTTTCAGGAGTTGCCGGAGTTTTTCGAGGACCATATGAATGAGTGGATGACTGAGCAAAGGAAATATCTAGCCAATAGTTATCCAGCGCTTGAGAATAGTGCTGATGGGCTTGCGGTGGTGGATGAGTTGCGCGCAGCGGTGTGTGAGAATATTAACCTTTATATGGAGAAGAATGAGGAAGAGTTTCAAGCTTACTTGAATGGTTTTGCGCTAGCTGTGTGGAATTTGTTAACAACTGTCTCTCAGGCATCGAGCCGTGATCAGCTGGCCGTTACAGCTATTAAGTTCTTGACTACTGTTAGCACAAGTGTGCATCATAATCTGTTTGCTGGTGACGGAGTGATACCCCAGATTTGTCAGGGCATTGTGATCCCGAATGTGAGGTTGAGGGATGAGGATGAGGAACTGTTTGATATGAATTACATTGAGTTCATCAGGAGGGATATGGAAGGCAGTGATCTTGATACTAGGAGGAGGATTGCTTGTGAGCTTCTTAAAGGGATTGCTACCAATTATAAACCACAGGTTACCAACTTGGTTTCTGTACAGATACAGAATTTGCTAACCTCTTTTGCCGCAAACCCATCTGAGAATTGGAAGGATAAGGACTGTGCAATATACTTGGTTGTATCACTTGCTACTAAGAGGGCTGGTGGCACTTCTGTTACGACTGATCTTGTTGATGTTCAGAACTTCTTTGGGACGGTGATTGTTCCAGAACTGCAGAGTCAGGATGTGAATGGATATCCAATGCTTAAGGCAGGCGCATTGAAATTTTTCACAATGTTCCGGAATCATATACCAAAGCCTATGACATTACAATTTTTTCCAGATTTGATTCGGTTCCTTCGTGCAGAGTCCAATGTAGTTCACTCTTATGCTGCAAGTTGTATTGAGAAGCTTTTGCTGGTAAAGGATGAGGGTGGACAAGCAAGATATACTTCAGCAGATATTTCTCCAGTGCTGCCACAACTGATGACCAACCTCTTTGAGGCTTTGAAGGTTCCAGAATCTGAGGAAAATCAATATGTGATGAAGTGTATTATGCGTGTTCTCGGAGTTGCAGACATATCCCGTGAGATTGTTGGACCTTGTATTACTGGGTTGATATCAATACTCAACAAAGCTTGTGAAAACCCCAAGAATCCAGTATTTAACCACTATGTTTTTGAGTCTGTGGCTGTCCTTGTGAAACGAGCATGTGGCAAGGATGCCTCTCTCATATCGATTTTTGAGATAAACCTTTTCCCCAGTATCCAGAAGATATTGGTCGAAGATGTGCAAGAGTTCTATCCTTATGCACTTCAGCTACTGGCTCTACTTGTTGAGTTGAACAGGCCACCCATTCCACAGAGTTATATGCAGATTTTTCCAATGCTGTTGTCTCCTGACTTGTGGAGAAAGGCTTCCAATGTCCCTGCTCTTGTGCGTTTGCTTCAAGCATTCCTTCAGAAGGCACCCCATGAGCTCAACCAAGAGGGCAGGTTGAGACAGGTCCTTGAGATTTCCAATAAGCTTGTCTCAGCCCGTAGTACTGATGAACAGGGTTTCTATGTGCTAAATACTGTTGTTGAGAGCCTTGATTTTAATGTGATTGCGCCTTACATTGGTCAGATTTGGAGTGCACTTTTCACAGTTCTCCAAAGCAGGCAGACAGGAAAGTTTATCAAGTGTCTATTGATTTTTATGTCACTCTTTCTGGTCAAACATGGCTCTACAAACCTTGTCGATTCAGTGAATGGCATTCAGGCCAACCTATTTCTGATGATCTTGGGGCAGTTTTGGATACCTAATCTTACGCTCATTACAGGAGTCATTGAGACAAAGTTGACTGCAGTTGCATCAACCCGACTTCTGTGTGAATCTCAAATGCTTCTGGATGCTGCAGCCGTTGAGCACTGGGGGAAACTGCTTAACAGCATTGTAACCCTTCTTTCACGAACAGAGCAGGACAGGGTTGAAGAGGATCCTGAAATGCCTGAATTTTCAGAAAATGTTGGATATTCTGCCACCTTTATTCGGCTGCACAATGCTGGGAAGACTGAGGATGATCCGCTGAAAGATATAAGAGATGCAAAGGAATTTTTGGTGACTTCGTTGGCTAGGCTTTCTGCGCTTTCTCCAGGCAGATACCCTCAAATCATCAGTCAATATGTTGAACCAACCAATCAGGCAGAACTACTTCGTCTCTGCAACTCTTATAACTGCCAAATTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005049 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005829 GO:0005911 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0009506 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0030054 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051168 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAS_CSE1 Cse1 IBN_N

Protein Analysis

972

Amino Acids

108.91

Weight (kDa)

5.34

Isoelectric Point (pI)

41.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	29 - 103	1.3e-11	Importin-beta N-terminal domain
Cse1	PF08506	162 - 531	7.3e-135	Cse1
CAS_CSE1	PF03378	532 - 960	1.3e-154	CAS/CSE protein, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46520
fragaria_vesca	FvH4_7g16830 FvH4_7g16830
malus_domestica	MD01G1083100.v1.1
prunus_persica	Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1 Prupe.2G190300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0360031
rosa_laevigata	RLG00000027837
rosa_multiflora	Rmu_co8506667.1_g000001 Rmu_ssc0000368.1_g000034
rosa_roxburghii	Rroxscaffold_4G00296440
rosa_rugosa	Rorug01G0274600
rosa_samantha	Rh1AG288500 Rh1BG254000 Rh1CG271500 Rh1DG283100
rosa_wichuraiana	Rw1G025580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1215, 2901
Acc36I	ACCTGC	1 cut(s)	2172
AccB1I	GGYRCC	2 cut(s)	440, 2155
AccB7I	CCANNNNNTGG	1 cut(s)	384
AccII	CGCG	1 cut(s)	831
AccIII	TCCGGA	1 cut(s)	1488
AclWI	GGATC	7 cut(s)	169, 250, 263, 1063, 2660, 2673, 2744
AcoI	YGGCCR	1 cut(s)	966
AcsI	RAATTY	8 cut(s)	494, 576, 697, 922, 1255, 1472, 2681, 2780
AcuI	CTGAAG	3 cut(s)	1626, 1988, 2132
AcyI	GRCGYC	2 cut(s)	264, 441
AfaI	GTAC	3 cut(s)	509, 1245, 2233
AfeI	AGCGCT	1 cut(s)	786
AflII	CTTAAG	1 cut(s)	1454
AjnI	CCWGG	6 cut(s)	15, 180, 327, 377, 432, 2821
AjuI	GAANNNNNNNTTGG	2 cut(s)	530, 562
AleI	CACNNNNGTG	1 cut(s)	1007
Alw21I	GWGCWC	5 cut(s)	141, 408, 2169, 2326, 2598
Alw26I	GTCTC	7 cut(s)	666, 943, 2088, 2182, 2224, 2513, 2891
Alw44I	GTGCAC	1 cut(s)	2322
AlwI	GGATC	7 cut(s)	169, 250, 263, 1063, 2660, 2673, 2744
AlwNI	CAGNNNCTG	3 cut(s)	384, 1712, 2011
Ama87I	CYCGRG	2 cut(s)	251, 401
Aor13HI	TCCGGA	1 cut(s)	1488
Aor51HI	AGCGCT	1 cut(s)	786
ApaI	GGGCCC	1 cut(s)	229
ApaLI	GTGCAC	1 cut(s)	2322
ApeKI	GCWGC	6 cut(s)	833, 1580, 1663, 2582, 2585, 2722
ApoI	RAATTY	8 cut(s)	494, 576, 697, 922, 1255, 1472, 2681, 2780
ArsI	GACNNNNNNTTYG	4 cut(s)	336, 368, 2830, 2862
Asp700I	GAANNNNTTC	4 cut(s)	882, 1475, 2104, 2880
AspLEI	GCGC	9 cut(s)	443, 643, 787, 831, 833, 910, 1466, 2299, 2815
AsuC2I	CCSGG	3 cut(s)	220, 252, 253
AsuHPI	GGTGA	3 cut(s)	1043, 1417, 2800
AsuNHI	GCTAGC	1 cut(s)	910
AvaI	CYCGRG	2 cut(s)	251, 401
AvaII	GGWCC	5 cut(s)	19, 274, 727, 1787, 2194
BaeGI	GKGCMC	2 cut(s)	229, 2326
BamHI	GGATCC	2 cut(s)	255, 2665
BanI	GGYRCC	2 cut(s)	440, 2155
BanII	GRGCYC	5 cut(s)	159, 229, 252, 408, 2169
BarI	GAAGNNNNNNTAC	2 cut(s)	107, 139
BbsI	GAAGAC	1 cut(s)	2744
Bbv12I	GWGCWC	5 cut(s)	141, 408, 2169, 2326, 2598
BbvI	GCAGC	6 cut(s)	845, 1567, 1650, 2569, 2597, 2709
BccI	CCATC	2 cut(s)	797, 1291
BceAI	ACGGC	6 cut(s)	119, 142, 606, 939, 953, 2573
BciT130I	CCWGG	6 cut(s)	17, 182, 329, 379, 434, 2823
BciVI	GTATCC	2 cut(s)	1964, 2478
BclI	TGATCA	1 cut(s)	958
BcnI	CCSGG	3 cut(s)	220, 252, 253
BcoDI	GTCTC	7 cut(s)	666, 943, 2088, 2182, 2224, 2513, 2891
BfaI	CTAG	5 cut(s)	350, 767, 911, 1167, 2802
BfmI	CTRYAG	4 cut(s)	676, 1421, 2532, 2583
BfoI	RGCGCY	3 cut(s)	444, 644, 788
BfrI	CTTAAG	1 cut(s)	1454
BfuAI	ACCTGC	1 cut(s)	2172
BfuI	GTATCC	2 cut(s)	1964, 2478
BglI	GCCNNNNNGGC	1 cut(s)	224
BlpI	GCTNAGC	1 cut(s)	338
BmcAI	AGTACT	1 cut(s)	2233
Bme1390I	CCNGG	9 cut(s)	17, 182, 220, 252, 253, 329, 379, 434, 2823
Bme18I	GGWCC	5 cut(s)	19, 274, 727, 1787, 2194
BmeT110I	CYCGRG	2 cut(s)	251, 401
BmrFI	CCNGG	9 cut(s)	17, 182, 220, 252, 253, 329, 379, 434, 2823
BmrI	ACTGGG	3 cut(s)	1809, 1944, 2608
BmsI	GCATC	6 cut(s)	956, 1021, 1900, 2549, 2569, 2761
BmtI	GCTAGC	1 cut(s)	914
BmuI	ACTGGG	3 cut(s)	1809, 1944, 2608
BpiI	GAAGAC	1 cut(s)	2744
BpmI	CTGGAG	2 cut(s)	1641, 2805
Bpu1102I	GCTNAGC	1 cut(s)	338
BpuEI	CTTGAG	4 cut(s)	197, 629, 809, 2219
BpuMI	CCSGG	3 cut(s)	220, 252, 253
Bsa29I	ATCGAT	1 cut(s)	1925
BsaHI	GRCGYC	2 cut(s)	264, 441
BsaJI	CCNNGG	7 cut(s)	15, 87, 168, 251, 328, 377, 432
BsaWI	WCCGGW	1 cut(s)	1488
BsaXI	ACNNNNNCTCC	2 cut(s)	43, 73
Bse118I	RCCGGY	2 cut(s)	437, 620
Bse1I	ACTGG	6 cut(s)	1658, 1804, 1847, 1950, 2016, 2603
BseAI	TCCGGA	1 cut(s)	1488
BseBI	CCWGG	6 cut(s)	17, 182, 329, 379, 434, 2823
BseCI	ATCGAT	1 cut(s)	1925
BseDI	CCNNGG	7 cut(s)	15, 87, 168, 251, 328, 377, 432
BseGI	GGATG	9 cut(s)	750, 826, 1096, 1102, 1438, 1621, 1915, 2584, 2752
BseMII	CTCAG	9 cut(s)	50, 352, 677, 741, 956, 1278, 1704, 2235, 2733
BseNI	ACTGG	6 cut(s)	1658, 1804, 1847, 1950, 2016, 2603
BsePI	GCGCGC	1 cut(s)	829
BseRI	GAGGAG	2 cut(s)	185, 1186
BseSI	GKGCMC	2 cut(s)	229, 2326
BseXI	GCAGC	6 cut(s)	845, 1567, 1650, 2569, 2597, 2709
BseYI	CCCAGC	1 cut(s)	2732
BsgI	GTGCAG	2 cut(s)	1572, 2708
Bsh1236I	CGCG	1 cut(s)	831
BshNI	GGYRCC	2 cut(s)	440, 2155
BshVI	ATCGAT	1 cut(s)	1925
BsiHKAI	GWGCWC	5 cut(s)	141, 408, 2169, 2326, 2598
BsiHKCI	CYCGRG	2 cut(s)	251, 401
BsiSI	CCGG	8 cut(s)	68, 220, 252, 438, 561, 621, 713, 1489
BslFI	GGGAC	2 cut(s)	1414, 2099
BsmAI	GTCTC	7 cut(s)	666, 943, 2088, 2182, 2224, 2513, 2891
BsmBI	CGTCTC	1 cut(s)	2891
BsmFI	GGGAC	2 cut(s)	1414, 2099
BsmI	GAATGC	2 cut(s)	2141, 2442
BsoBI	CYCGRG	2 cut(s)	251, 401
Bsp120I	GGGCCC	1 cut(s)	225
Bsp1286I	GDGCHC	8 cut(s)	141, 159, 229, 252, 408, 2169, 2326, 2598
Bsp13I	TCCGGA	1 cut(s)	1488
Bsp1407I	TGTACA	1 cut(s)	1243
Bsp1720I	GCTNAGC	1 cut(s)	338
BspCNI	CTCAG	9 cut(s)	49, 351, 676, 742, 955, 1279, 1705, 2234, 2734
BspDI	ATCGAT	1 cut(s)	1925
BspEI	TCCGGA	1 cut(s)	1488
BspFNI	CGCG	1 cut(s)	831
BspMAI	CTGCAG	3 cut(s)	1425, 2536, 2587
BspMI	ACCTGC	1 cut(s)	2172
BspOI	GCTAGC	1 cut(s)	914
BspPI	GGATC	7 cut(s)	169, 250, 263, 1063, 2660, 2673, 2744
BspT107I	GGYRCC	2 cut(s)	440, 2155
BspTI	CTTAAG	1 cut(s)	1454
BsrFI	RCCGGY	2 cut(s)	437, 620
BsrGI	TGTACA	1 cut(s)	1243
BsrI	ACTGG	6 cut(s)	1658, 1804, 1847, 1950, 2016, 2603
BssAI	RCCGGY	2 cut(s)	437, 620
BssECI	CCNNGG	7 cut(s)	15, 87, 168, 251, 328, 377, 432
BssHII	GCGCGC	1 cut(s)	829
BssNI	GRCGYC	2 cut(s)	264, 441
Bst2UI	CCWGG	6 cut(s)	17, 182, 329, 379, 434, 2823
Bst4CI	ACNGT	9 cut(s)	461, 545, 937, 997, 1107, 1310, 1405, 2266, 2335
Bst6I	CTCTTC	2 cut(s)	873, 2655
BstACI	GRCGYC	2 cut(s)	264, 441
BstAFI	CTTAAG	1 cut(s)	1454
BstAUI	TGTACA	1 cut(s)	1243
BstEII	GGTNACC	1 cut(s)	1225
BstENI	CCTNNNNNAGG	3 cut(s)	422, 1688, 2150
BstF5I	GGATG	9 cut(s)	750, 826, 1096, 1102, 1438, 1621, 1915, 2584, 2752
BstFNI	CGCG	1 cut(s)	831
BstH2I	RGCGCY	3 cut(s)	444, 644, 788
BstHHI	GCGC	9 cut(s)	443, 643, 787, 831, 833, 910, 1466, 2299, 2815
BstMAI	GTCTC	7 cut(s)	666, 943, 2088, 2182, 2224, 2513, 2891
BstNI	CCWGG	6 cut(s)	17, 182, 329, 379, 434, 2823
BstNSI	RCATGY	1 cut(s)	1902
BstPI	GGTNACC	1 cut(s)	1225
BstSCI	CCNGG	9 cut(s)	15, 180, 218, 250, 251, 327, 377, 432, 2821
BstSFI	CTRYAG	4 cut(s)	676, 1421, 2532, 2583
BstSLI	GKGCMC	2 cut(s)	229, 2326
BstUI	CGCG	1 cut(s)	831
BstV1I	GCAGC	6 cut(s)	845, 1567, 1650, 2569, 2597, 2709
BstV2I	GAAGAC	1 cut(s)	2744
BstX2I	RGATCY	3 cut(s)	174, 255, 2665
BstYI	RGATCY	3 cut(s)	174, 255, 2665
Bsu15I	ATCGAT	1 cut(s)	1925
BsuI	GTATCC	2 cut(s)	1964, 2478
BsuTUI	ATCGAT	1 cut(s)	1925
BtsCI	GGATG	9 cut(s)	750, 826, 1096, 1102, 1438, 1621, 1915, 2584, 2752
BtsI	GCAGTG	2 cut(s)	471, 1159
BtsIMutI	CAGTG	6 cut(s)	44, 471, 1159, 1665, 2439, 2596
BveI	ACCTGC	1 cut(s)	2172
CaiI	CAGNNNCTG	3 cut(s)	384, 1712, 2011
CfoI	GCGC	9 cut(s)	443, 643, 787, 831, 833, 910, 1466, 2299, 2815
Cfr10I	RCCGGY	2 cut(s)	437, 620
Cfr9I	CCCGGG	1 cut(s)	251
ClaI	ATCGAT	1 cut(s)	1925
CseI	GACGC	1 cut(s)	272
Csp6I	GTAC	3 cut(s)	508, 1244, 2232
CviAII	CATG	4 cut(s)	304, 1899, 2162, 2408
CviQI	GTAC	3 cut(s)	508, 1244, 2232
DinI	GGCGCC	1 cut(s)	442
EaeI	YGGCCR	1 cut(s)	966
Eam1104I	CTCTTC	2 cut(s)	873, 2655
EarI	CTCTTC	2 cut(s)	873, 2655
EciI	GGCGGA	3 cut(s)	131, 167, 639
Ecl136II	GAGCTC	2 cut(s)	406, 2167
Eco24I	GRGCYC	5 cut(s)	159, 229, 252, 408, 2169
Eco32I	GATATC	2 cut(s)	1445, 1809
Eco47I	GGWCC	5 cut(s)	19, 274, 727, 1787, 2194
Eco47III	AGCGCT	1 cut(s)	786
Eco53kI	GAGCTC	2 cut(s)	406, 2167
Eco57I	CTGAAG	3 cut(s)	1626, 1988, 2132
Eco88I	CYCGRG	2 cut(s)	251, 401
Eco91I	GGTNACC	1 cut(s)	1225
EcoICRI	GAGCTC	2 cut(s)	406, 2167
EcoNI	CCTNNNNNAGG	3 cut(s)	422, 1688, 2150
EcoO109I	RGGNCCY	3 cut(s)	19, 226, 2194
EcoO65I	GGTNACC	1 cut(s)	1225
EcoRII	CCWGG	6 cut(s)	15, 180, 327, 377, 432, 2821
EcoRV	GATATC	2 cut(s)	1445, 1809
EcoT38I	GRGCYC	5 cut(s)	159, 229, 252, 408, 2169
EgeI	GGCGCC	1 cut(s)	442
EheI	GGCGCC	1 cut(s)	442
Esp3I	CGTCTC	1 cut(s)	2891
FaeI	CATG	4 cut(s)	307, 1902, 2165, 2411
FalI	AAGNNNNNCTT	4 cut(s)	1624, 1656, 2130, 2162
FaqI	GGGAC	2 cut(s)	1414, 2099
FatI	CATG	4 cut(s)	303, 1898, 2161, 2407
FauI	CCCGC	1 cut(s)	238
FauNDI	CATATG	1 cut(s)	732
FbaI	TGATCA	1 cut(s)	958
FokI	GGATG	9 cut(s)	757, 833, 1103, 1109, 1445, 1628, 1922, 2591, 2759
FriOI	GRGCYC	5 cut(s)	159, 229, 252, 408, 2169
FspBI	CTAG	5 cut(s)	350, 767, 911, 1167, 2802
GlaI	GCGC	9 cut(s)	442, 642, 786, 830, 832, 909, 1465, 2298, 2814
GsaI	CCCAGC	1 cut(s)	2736
GsuI	CTGGAG	2 cut(s)	1641, 2805
HaeII	RGCGCY	3 cut(s)	444, 644, 788
HapII	CCGG	8 cut(s)	68, 220, 252, 438, 561, 621, 713, 1489
HgaI	GACGC	1 cut(s)	272
HhaI	GCGC	9 cut(s)	443, 643, 787, 831, 833, 910, 1466, 2299, 2815
Hin1I	GRCGYC	2 cut(s)	264, 441
Hin1II	CATG	4 cut(s)	307, 1902, 2165, 2411
Hin6I	GCGC	9 cut(s)	441, 641, 785, 829, 831, 908, 1464, 2297, 2813
HinP1I	GCGC	9 cut(s)	441, 641, 785, 829, 831, 908, 1464, 2297, 2813
HincII	GTYRAC	5 cut(s)	49, 196, 457, 930, 2529
HindII	GTYRAC	5 cut(s)	49, 196, 457, 930, 2529
HindIII	AAGCTT	4 cut(s)	888, 1598, 1824, 2213
HpaI	GTTAAC	2 cut(s)	457, 930
HpaII	CCGG	8 cut(s)	68, 220, 252, 438, 561, 621, 713, 1489
HphI	GGTGA	3 cut(s)	1043, 1417, 2800
Hpy166II	GTNNAC	8 cut(s)	49, 196, 457, 930, 1570, 1625, 2324, 2529
Hpy8I	GTNNAC	8 cut(s)	49, 196, 457, 930, 1570, 1625, 2324, 2529
Hpy99I	CGWCG	4 cut(s)	152, 167, 248, 266
HpyAV	CCTTC	8 cut(s)	265, 1142, 1291, 1556, 1693, 2146, 2156, 2639
HpyCH4III	ACNGT	9 cut(s)	461, 545, 937, 997, 1107, 1310, 1405, 2266, 2335
HpyCH4IV	ACGT	1 cut(s)	162
HpySE526I	ACGT	1 cut(s)	162
Hsp92I	GRCGYC	2 cut(s)	264, 441
Hsp92II	CATG	4 cut(s)	307, 1902, 2165, 2411
HspAI	GCGC	9 cut(s)	441, 641, 785, 829, 831, 908, 1464, 2297, 2813
KasI	GGCGCC	1 cut(s)	440
Kpn2I	TCCGGA	1 cut(s)	1488
KroI	GCCGGC	2 cut(s)	437, 620
KroNI	GCCGGC	2 cut(s)	439, 622
Ksp22I	TGATCA	1 cut(s)	958
KspAI	GTTAAC	2 cut(s)	457, 930
LmnI	GCTCC	3 cut(s)	70, 144, 402
Lsp1109I	GCAGC	6 cut(s)	845, 1567, 1650, 2569, 2597, 2709
LweI	GCATC	6 cut(s)	956, 1021, 1900, 2549, 2569, 2761
MaeI	CTAG	5 cut(s)	350, 767, 911, 1167, 2802
MaeII	ACGT	1 cut(s)	162
MaeIII	GTNAC	8 cut(s)	295, 970, 1031, 1225, 1363, 2388, 2623, 2788
MboII	GAAGA	7 cut(s)	679, 880, 890, 1972, 1985, 2672, 2749
MflI	RGATCY	3 cut(s)	174, 255, 2665
MhlI	GDGCHC	8 cut(s)	141, 159, 229, 252, 408, 2169, 2326, 2598
Mly113I	GGCGCC	1 cut(s)	441
MlyI	GAGTC	6 cut(s)	614, 668, 1435, 1565, 1880, 2520
MmeI	TCCRAC	3 cut(s)	267, 1765, 2677
MroI	TCCGGA	1 cut(s)	1488
MroNI	GCCGGC	2 cut(s)	437, 620
MroXI	GAANNNNTTC	4 cut(s)	882, 1475, 2104, 2880
MslI	CAYNNNNRTG	4 cut(s)	302, 735, 1007, 1575
MspA1I	CMGCKG	4 cut(s)	652, 836, 964, 2755
MspCI	CTTAAG	1 cut(s)	1454
MspI	CCGG	8 cut(s)	68, 220, 252, 438, 561, 621, 713, 1489
MspR9I	CCNGG	9 cut(s)	17, 182, 220, 252, 253, 329, 379, 434, 2823
Mva1269I	GAATGC	2 cut(s)	2141, 2442
MvaI	CCWGG	6 cut(s)	17, 182, 329, 379, 434, 2823
MvnI	CGCG	1 cut(s)	831
NaeI	GCCGGC	2 cut(s)	439, 622
NarI	GGCGCC	1 cut(s)	441
NciI	CCSGG	3 cut(s)	220, 252, 253
NdeI	CATATG	1 cut(s)	732
NgoMIV	GCCGGC	2 cut(s)	437, 620
NheI	GCTAGC	1 cut(s)	910
NlaIII	CATG	4 cut(s)	307, 1902, 2165, 2411
NmeAIII	GCCGAG	5 cut(s)	112, 178, 193, 292, 447
NmuCI	GTSAC	4 cut(s)	295, 1031, 2388, 2788
NspI	RCATGY	1 cut(s)	1902
OliI	CACNNNNGTG	1 cut(s)	1007
PauI	GCGCGC	1 cut(s)	829
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 366, 1546
PctI	GAATGC	2 cut(s)	2141, 2442
PdiI	GCCGGC	2 cut(s)	439, 622
PdmI	GAANNNNTTC	4 cut(s)	882, 1475, 2104, 2880
PfeI	GAWTC	6 cut(s)	1492, 1537, 1709, 1843, 2429, 2561
PflMI	CCANNNNNTGG	1 cut(s)	384
PleI	GAGTC	6 cut(s)	613, 667, 1434, 1564, 1879, 2519
PluTI	GGCGCC	1 cut(s)	444
PpsI	GAGTC	6 cut(s)	613, 667, 1434, 1564, 1879, 2519
PpuMI	RGGWCCY	2 cut(s)	19, 2194
PsiI	TTATAA	2 cut(s)	1215, 2901
Psp124BI	GAGCTC	2 cut(s)	408, 2169
Psp5II	RGGWCCY	2 cut(s)	19, 2194
Psp6I	CCWGG	6 cut(s)	15, 180, 327, 377, 432, 2821
PspEI	GGTNACC	1 cut(s)	1225
PspFI	CCCAGC	1 cut(s)	2732
PspGI	CCWGG	6 cut(s)	15, 180, 327, 377, 432, 2821
PspOMI	GGGCCC	1 cut(s)	225
PspPPI	RGGWCCY	2 cut(s)	19, 2194
PstI	CTGCAG	3 cut(s)	1425, 2536, 2587
PstNI	CAGNNNCTG	3 cut(s)	384, 1712, 2011
PsuI	RGATCY	3 cut(s)	174, 255, 2665
PteI	GCGCGC	1 cut(s)	829
PvuII	CAGCTG	1 cut(s)	964
RsaI	GTAC	3 cut(s)	509, 1245, 2233
RsaNI	GTAC	3 cut(s)	508, 1244, 2232
RseI	CAYNNNNRTG	4 cut(s)	302, 735, 1007, 1575
SacI	GAGCTC	2 cut(s)	408, 2169
ScaI	AGTACT	1 cut(s)	2233
SchI	GAGTC	6 cut(s)	614, 668, 1435, 1565, 1880, 2520
ScrFI	CCNGG	9 cut(s)	17, 182, 220, 252, 253, 329, 379, 434, 2823
SduI	GDGCHC	8 cut(s)	141, 159, 229, 252, 408, 2169, 2326, 2598
SfaNI	GCATC	6 cut(s)	956, 1021, 1900, 2549, 2569, 2761
SfcI	CTRYAG	4 cut(s)	676, 1421, 2532, 2583
SfiI	GGCCNNNNNGGCC	1 cut(s)	224
SfoI	GGCGCC	1 cut(s)	442
SinI	GGWCC	5 cut(s)	19, 274, 727, 1787, 2194
SmaI	CCCGGG	1 cut(s)	253
SmiMI	CAYNNNNRTG	4 cut(s)	302, 735, 1007, 1575
SmlI	CTYRAG	5 cut(s)	212, 644, 788, 1454, 2198
SmoI	CTYRAG	5 cut(s)	212, 644, 788, 1454, 2198
SspDI	GGCGCC	1 cut(s)	440
SspI	AATATT	1 cut(s)	850
SspMI	CTAG	5 cut(s)	350, 767, 911, 1167, 2802
SstI	GAGCTC	2 cut(s)	408, 2169
StyD4I	CCNGG	9 cut(s)	15, 180, 218, 250, 251, 327, 377, 432, 2821
TaaI	ACNGT	9 cut(s)	461, 545, 937, 997, 1107, 1310, 1405, 2266, 2335
TaiI	ACGT	1 cut(s)	165
TaqI	TCGA	6 cut(s)	261, 723, 950, 1925, 1971, 2427
TatI	WGTACW	3 cut(s)	507, 1243, 2231
TauI	GCSGC	6 cut(s)	81, 188, 638, 641, 652, 1277
TfiI	GAWTC	6 cut(s)	1492, 1537, 1709, 1843, 2429, 2561
TscAI	CASTG	6 cut(s)	44, 478, 1159, 1665, 2439, 2603
TseFI	GTSAC	4 cut(s)	295, 1031, 2388, 2788
TseI	GCWGC	6 cut(s)	833, 1580, 1663, 2582, 2585, 2722
Tsp45I	GTSAC	4 cut(s)	295, 1031, 2388, 2788
TspDTI	ATGAA	5 cut(s)	749, 1120, 1130, 1748, 2253
TspGWI	ACGGA	3 cut(s)	181, 442, 1050
TspMI	CCCGGG	1 cut(s)	251
TspRI	CASTG	6 cut(s)	44, 478, 1159, 1665, 2439, 2603
Van91I	CCANNNNNTGG	1 cut(s)	384
Vha464I	CTTAAG	1 cut(s)	1454
VneI	GTGCAC	1 cut(s)	2322
VpaK11BI	GGWCC	5 cut(s)	19, 274, 727, 1787, 2194
XagI	CCTNNNNNAGG	3 cut(s)	422, 1688, 2150
XapI	RAATTY	8 cut(s)	494, 576, 697, 922, 1255, 1472, 2681, 2780
XceI	RCATGY	1 cut(s)	1902
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1290
XmaI	CCCGGG	1 cut(s)	251
XmnI	GAANNNNTTC	4 cut(s)	882, 1475, 2104, 2880
XspI	CTAG	5 cut(s)	350, 767, 911, 1167, 2802
ZrmI	AGTACT	1 cut(s)	2233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.