AT2G47370
ERF Family

BEST Arabidopsis thaliana protein match is Calcium-dependent phosphotriesterase superfamily protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0013143
Physical Location & Seq
Reverse (-)
19438951 .. 19440487
1537 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G47370.1

Sequence Viewer

Length: 993 bp
ATGTCGCCGTCCTGCTGCTCCGGCAAATACTCCGTCGCTCTCTTCTTCTTCATTCTCTCCGCCGTTCCAATAGCTTATATTATCTCTTCAGAGAAAGCTGTTCCTTCCACGCACGTCATCTCTTACCACAGCTCCGGCTTCCTCCGCGAGTGCGCCAAATGGGACGACGTTGGTCGGAGATTCCTCGTTTCCTACATGGACGGCGGCGGCGGTATCGGCGAGCTTGTTCCTACTAAAGATTCCGACGACGTTCTTAAGGAAGTCACTTTGGTCAAAGACGTTGACCTCGCCGGTAACTCTTCCAACGGATTTGTCATCGACCGCCACCGAAACCGTCTCCTCCTCGCTGTCGGCGATTTGCTTGGAAATCGTTATAGTGCTTTAGTGGCCTATGATTTGTCCACGTGGCGTCGTCTCTTCCTCACAGTGCTTAGCAGCCATAGTAAAGAGATAACATACGCAGACGATGTAGCTGTTGATACACAAGGAAATGCTTATGTATCTGATGCAAAAGGAGGTAAAATATGGGTTGTTGATGTCAATGGAAAGCTAGTGTACACCATTAGAAGCCCTCTCTTCACTACACCTGGTTGGTATAATAACTTTGTCTCTCTTAACGGCATTGTTTATCACCCGGAGGGGTTCCTTATCGTCATCCACACTTTCTCCGGTTTCTTATACAAAATCGATGTAACCAATGGGGATGTTAGTAGTAAAGTCACTGTTATTGACGTTTCTGGTGGGTCTTTGAGGTTTGGTGATGGGCTTGAGTTCTTGTCTCCAACCAAGATTGTTGTTGCAGGTAGCCCGTCTTCGAAACTGGTAGAGAGTTCAGACGGGTGGCGGACGGCTTCTGTGACGGGTTGGTTCAGCAGCGGTATGGTTCATCGGTTAGTCTCGTCGGCTACTGTTAAAGAAGGAAGAGTTTATCTTAATCACATTGTTGGGTTTGGGTCTAAGAAGAGACACATACTTGTGGAAGCTGTGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SGL

Protein Analysis

330

Amino Acids

35.91

Weight (kDa)

7.74

Isoelectric Point (pI)

35.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G16760 AT2G47370 AT2G47370 AT5G28660
fragaria_vesca FvH4_5g39130
malus_domestica MD03G1294500.v1.1
prunus_persica Prupe.8G266600_v2.0.a1
pyrus_communis pycom03g23290
rosa_chinensis RchiOBHm_Chr7g0241121
rosa_laevigata RLG00000000595
rosa_multiflora Rmu_sc0008150.1_g000002
rosa_roxburghii Rroxscaffold_3G00219250
rosa_rugosa Rorug07G0342600
rosa_samantha Rh7AG497700 Rh7BG468500 Rh7CG514600 Rh7DG481900
rosa_wichuraiana Rw7G041990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 791
AccII CGCG 1 cut(s) 147
AciI CCGC 8 cut(s) 60, 145, 204, 207, 210, 322, 844, 876
AcuI CTGAAG 1 cut(s) 72
AcvI CACGTG 1 cut(s) 405
AcyI GRCGYC 1 cut(s) 409
AfaI GTAC 1 cut(s) 557
AflII CTTAAG 1 cut(s) 254
AjiI CACGTC 1 cut(s) 115
AjnI CCWGG 1 cut(s) 586
AluBI AGCT 7 cut(s) 74, 98, 132, 223, 473, 550, 983
AluI AGCT 7 cut(s) 74, 98, 132, 223, 473, 550, 983
Alw26I GTCTC 6 cut(s) 341, 419, 613, 783, 901, 958
AoxI GGCC 1 cut(s) 387
ApeKI GCWGC 3 cut(s) 15, 435, 873
ArsI GACNNNNNNTTYG 2 cut(s) 18, 50
AspLEI GCGC 1 cut(s) 155
AsuC2I CCSGG 1 cut(s) 635
AsuHPI GGTGA 2 cut(s) 623, 770
AsuII TTCGAA 1 cut(s) 815
BarI GAAGNNNNNNTAC 2 cut(s) 796, 828
BbrPI CACGTG 1 cut(s) 405
BbsI GAAGAC 1 cut(s) 804
BbvI GCAGC 3 cut(s) 2, 447, 885
BccI CCATC 1 cut(s) 755
BceAI ACGGC 4 cut(s) 47, 217, 634, 864
BciT130I CCWGG 1 cut(s) 588
BcnI CCSGG 1 cut(s) 635
BcoDI GTCTC 6 cut(s) 341, 419, 613, 783, 901, 958
BfaI CTAG 1 cut(s) 551
BfrI CTTAAG 1 cut(s) 254
BfuAI ACCTGC 1 cut(s) 791
BisI GCNGC 5 cut(s) 16, 205, 208, 436, 874
BlpI GCTNAGC 1 cut(s) 431
BlsI GCNGC 5 cut(s) 17, 206, 209, 437, 875
Bme1390I CCNGG 2 cut(s) 588, 635
BmgBI CACGTC 1 cut(s) 115
BmiI GGNNCC 1 cut(s) 644
BmrFI CCNGG 2 cut(s) 588, 635
BmsI GCATC 1 cut(s) 496
BoxI GACNNNNGTC 1 cut(s) 171
BpiI GAAGAC 1 cut(s) 804
Bpu1102I GCTNAGC 1 cut(s) 431
Bpu14I TTCGAA 1 cut(s) 815
BpuEI CTTGAG 1 cut(s) 788
BpuMI CCSGG 1 cut(s) 635
Bsa29I ATCGAT 1 cut(s) 687
BsaAI YACGTR 1 cut(s) 405
BsaHI GRCGYC 1 cut(s) 409
BsaWI WCCGGW 1 cut(s) 668
BsaXI ACNNNNNCTCC 4 cut(s) 116, 146, 650, 680
Bse118I RCCGGY 1 cut(s) 290
Bse1I ACTGG 1 cut(s) 825
BseBI CCWGG 1 cut(s) 588
BseCI ATCGAT 1 cut(s) 687
BseGI GGATG 2 cut(s) 654, 709
BseNI ACTGG 1 cut(s) 825
BseRI GAGGAG 2 cut(s) 329, 332
BseXI GCAGC 3 cut(s) 2, 447, 885
Bsh1236I CGCG 1 cut(s) 147
Bsh1285I CGRYCG 1 cut(s) 322
BshFI GGCC 1 cut(s) 389
BshVI ATCGAT 1 cut(s) 687
BsiEI CGRYCG 1 cut(s) 322
BsiSI CCGG 5 cut(s) 21, 135, 291, 635, 669
BslFI GGGAC 1 cut(s) 176
BsmAI GTCTC 6 cut(s) 341, 419, 613, 783, 901, 958
BsmBI CGTCTC 2 cut(s) 341, 419
BsmFI GGGAC 1 cut(s) 176
BsnI GGCC 1 cut(s) 389
Bsp119I TTCGAA 1 cut(s) 815
Bsp1407I TGTACA 1 cut(s) 555
Bsp1720I GCTNAGC 1 cut(s) 431
BspACI CCGC 8 cut(s) 60, 145, 204, 207, 210, 322, 844, 876
BspANI GGCC 1 cut(s) 389
BspDI ATCGAT 1 cut(s) 687
BspFNI CGCG 1 cut(s) 147
BspLI GGNNCC 1 cut(s) 644
BspMI ACCTGC 1 cut(s) 791
BspT104I TTCGAA 1 cut(s) 815
BspTI CTTAAG 1 cut(s) 254
BsrFI RCCGGY 1 cut(s) 290
BsrGI TGTACA 1 cut(s) 555
BsrI ACTGG 1 cut(s) 825
BssAI RCCGGY 1 cut(s) 290
BssNI GRCGYC 1 cut(s) 409
Bst2UI CCWGG 1 cut(s) 588
Bst4CI ACNGT 4 cut(s) 335, 427, 724, 910
Bst6I CTCTTC 7 cut(s) 47, 91, 304, 422, 581, 916, 956
BstACI GRCGYC 1 cut(s) 409
BstAFI CTTAAG 1 cut(s) 254
BstAUI TGTACA 1 cut(s) 555
BstBAI YACGTR 1 cut(s) 405
BstBI TTCGAA 1 cut(s) 815
BstC8I GCNNGC 1 cut(s) 221
BstDEI CTNAG 2 cut(s) 431, 957
BstF5I GGATG 2 cut(s) 654, 709
BstFNI CGCG 1 cut(s) 147
BstHHI GCGC 1 cut(s) 155
BstMAI GTCTC 6 cut(s) 341, 419, 613, 783, 901, 958
BstMCI CGRYCG 1 cut(s) 322
BstMWI GCNNNNNNNGC 4 cut(s) 21, 144, 216, 386
BstNI CCWGG 1 cut(s) 588
BstPAI GACNNNNGTC 1 cut(s) 171
BstSCI CCNGG 2 cut(s) 586, 633
BstUI CGCG 1 cut(s) 147
BstV1I GCAGC 3 cut(s) 2, 447, 885
BstV2I GAAGAC 1 cut(s) 804
Bsu15I ATCGAT 1 cut(s) 687
BsuRI GGCC 1 cut(s) 389
BsuTUI ATCGAT 1 cut(s) 687
BtrI CACGTC 1 cut(s) 115
BtsCI GGATG 2 cut(s) 654, 709
BtsIMutI CAGTG 2 cut(s) 432, 720
BveI ACCTGC 1 cut(s) 791
Cac8I GCNNGC 1 cut(s) 221
CfoI GCGC 1 cut(s) 155
Cfr10I RCCGGY 1 cut(s) 290
ClaI ATCGAT 1 cut(s) 687
CseI GACGC 1 cut(s) 398
CsiI ACCWGGT 1 cut(s) 586
Csp6I GTAC 1 cut(s) 556
CviAII CATG 1 cut(s) 196
CviQI GTAC 1 cut(s) 556
DdeI CTNAG 2 cut(s) 431, 957
Eam1104I CTCTTC 7 cut(s) 47, 91, 304, 422, 581, 916, 956
EarI CTCTTC 7 cut(s) 47, 91, 304, 422, 581, 916, 956
EciI GGCGGA 2 cut(s) 49, 859
Eco57I CTGAAG 1 cut(s) 72
Eco72I CACGTG 1 cut(s) 405
EcoRII CCWGG 1 cut(s) 586
Esp3I CGTCTC 2 cut(s) 341, 419
FaeI CATG 1 cut(s) 199
FaqI GGGAC 1 cut(s) 176
FatI CATG 1 cut(s) 195
Fnu4HI GCNGC 5 cut(s) 16, 205, 208, 436, 874
FokI GGATG 2 cut(s) 641, 716
Fsp4HI GCNGC 5 cut(s) 16, 205, 208, 436, 874
FspBI CTAG 1 cut(s) 551
GlaI GCGC 1 cut(s) 154
GluI GCNGC 5 cut(s) 16, 205, 208, 436, 874
HaeIII GGCC 1 cut(s) 389
HapII CCGG 5 cut(s) 21, 135, 291, 635, 669
HgaI GACGC 1 cut(s) 398
HhaI GCGC 1 cut(s) 155
Hin1I GRCGYC 1 cut(s) 409
Hin1II CATG 1 cut(s) 199
Hin6I GCGC 1 cut(s) 153
HinP1I GCGC 1 cut(s) 153
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HinfI GANTC 2 cut(s) 180, 239
HpaII CCGG 5 cut(s) 21, 135, 291, 635, 669
HphI GGTGA 2 cut(s) 623, 770
Hpy166II GTNNAC 4 cut(s) 283, 402, 556, 558
Hpy188I TCNGA 5 cut(s) 91, 177, 244, 505, 835
Hpy8I GTNNAC 4 cut(s) 283, 402, 556, 558
Hpy99I CGWCG 6 cut(s) 38, 170, 248, 251, 414, 904
HpyAV CCTTC 2 cut(s) 114, 911
HpyCH4III ACNGT 4 cut(s) 335, 427, 724, 910
HpyCH4IV ACGT 6 cut(s) 114, 168, 249, 279, 404, 732
HpyCH4V TGCA 2 cut(s) 509, 800
HpyF10VI GCNNNNNNNGC 4 cut(s) 21, 144, 216, 386
HpyF3I CTNAG 2 cut(s) 431, 957
HpySE526I ACGT 6 cut(s) 114, 168, 249, 279, 404, 732
Hsp92I GRCGYC 1 cut(s) 409
Hsp92II CATG 1 cut(s) 199
HspAI GCGC 1 cut(s) 153
LmnI GCTCC 2 cut(s) 23, 137
Lsp1109I GCAGC 3 cut(s) 2, 447, 885
LweI GCATC 1 cut(s) 496
MabI ACCWGGT 1 cut(s) 586
MaeI CTAG 1 cut(s) 551
MaeII ACGT 6 cut(s) 114, 168, 249, 279, 404, 732
MaeIII GTNAC 5 cut(s) 262, 293, 691, 718, 856
MmeI TCCRAC 4 cut(s) 155, 267, 327, 806
MseI TTAA 4 cut(s) 255, 615, 912, 933
MslI CAYNNNNRTG 1 cut(s) 974
MspA1I CMGCKG 1 cut(s) 876
MspCI CTTAAG 1 cut(s) 254
MspI CCGG 5 cut(s) 21, 135, 291, 635, 669
MspR9I CCNGG 2 cut(s) 588, 635
MvaI CCWGG 1 cut(s) 588
MvnI CGCG 1 cut(s) 147
MwoI GCNNNNNNNGC 4 cut(s) 21, 144, 216, 386
NciI CCSGG 1 cut(s) 635
NlaIII CATG 1 cut(s) 199
NlaIV GGNNCC 1 cut(s) 644
NmuCI GTSAC 3 cut(s) 262, 718, 856
NspV TTCGAA 1 cut(s) 815
PcsI WCGNNNNNNNCGW 1 cut(s) 351
PfeI GAWTC 2 cut(s) 180, 239
PkrI GCNGC 5 cut(s) 17, 206, 209, 437, 875
PmaCI CACGTG 1 cut(s) 405
PmlI CACGTG 1 cut(s) 405
Ppu21I YACGTR 1 cut(s) 405
PshAI GACNNNNGTC 1 cut(s) 171
Psp6I CCWGG 1 cut(s) 586
PspCI CACGTG 1 cut(s) 405
PspGI CCWGG 1 cut(s) 586
PspN4I GGNNCC 1 cut(s) 644
RsaI GTAC 1 cut(s) 557
RsaNI GTAC 1 cut(s) 556
RseI CAYNNNNRTG 1 cut(s) 974
SaqAI TTAA 4 cut(s) 255, 615, 912, 933
SatI GCNGC 5 cut(s) 16, 205, 208, 436, 874
ScrFI CCNGG 2 cut(s) 588, 635
SexAI ACCWGGT 1 cut(s) 586
SfaNI GCATC 1 cut(s) 496
SfuI TTCGAA 1 cut(s) 815
SmiMI CAYNNNNRTG 1 cut(s) 974
SmlI CTYRAG 2 cut(s) 254, 767
SmoI CTYRAG 2 cut(s) 254, 767
SsiI CCGC 8 cut(s) 60, 145, 204, 207, 210, 322, 844, 876
SspMI CTAG 1 cut(s) 551
StyD4I CCNGG 2 cut(s) 586, 633
TaaI ACNGT 4 cut(s) 335, 427, 724, 910
TaiI ACGT 6 cut(s) 117, 171, 252, 282, 407, 735
TaqI TCGA 3 cut(s) 318, 687, 815
TatI WGTACW 1 cut(s) 555
TauI GCSGC 2 cut(s) 207, 210
TfiI GAWTC 2 cut(s) 180, 239
Tru1I TTAA 4 cut(s) 255, 615, 912, 933
Tru9I TTAA 4 cut(s) 255, 615, 912, 933
TscAI CASTG 2 cut(s) 432, 727
TseFI GTSAC 3 cut(s) 262, 718, 856
TseI GCWGC 3 cut(s) 15, 435, 873
Tsp45I GTSAC 3 cut(s) 262, 718, 856
TspDTI ATGAA 2 cut(s) 40, 875
TspGWI ACGGA 2 cut(s) 22, 321
TspRI CASTG 2 cut(s) 432, 727
Vha464I CTTAAG 1 cut(s) 254
XspI CTAG 1 cut(s) 551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.