FvH4_5g39130
ERF Family

Calcium-dependent phosphotriesterase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0013143
Physical Location & Seq
Reverse (-)
28876946 .. 28879107
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g39130.t1

Sequence Viewer

Length: 987 bp
ATGGCTTTCTGCCGCTGCTGCTCACCCAGACTGCTCTTCCTCTTCTTCATCCTCTCCGCCGTACCCATCGCCTACCTCATCTCTCTCGAGCTCGCCGCCCCCACCACTCACGTCTACCACTACCACGCCGCCGGCTGGTTCCGCGAGTGCGCCAAGTGGGACGATCTCAACCGCCGCTTCCTCGTCTCCTTCATGAGCGGCGGCATCGGCCAGATTCCCGTCCCCGCCGATCACATCCCCGGCGCTGTTCTCGAGGAGTCCACCTTGGTCAAACACGTTGACTTGGCCAACAACGCTTCTCTCGGCTTCATCATCGACCGCCCCCGGAACCGCCTCCTCGTCACCACCGCTGACGTCATGGGCAACCGCTACAGCGCCCTCGCCGCCTACGACCTCTCCACCTGGGACCGCCTCTTCCTCACCCAGCTCAGCGGCCCTAGTGATCCGAAAGCAATGGCAGATGATGTTGCAGTCGATTCAGAAGGTAATGCATATGTGACAGATTGCGCAGGCAGTTTTATTTGGAAGGTTGGAGTGGATGGCAAGTTCCTATCAACTATCAAAAGTCCTCTCTTCACTCCAAAAGAATGGTACAAAGCCATTGTTGGCTTAAATGGAATCGTTTACCACCCAGATGGATACTTGATTGTTATTCACACTTTCAGCGGCAATTTGTTCAAGATCGACATATCAAAGGGAGACGAAGTGAAGCAAATTAAGATTGTAGAAGGTTCACTGAAATTTGGAGATGGTTTAGAACTACTTTCTCCAACCCAGCTTGTAGTTGCTGGGAACCCATCTGGTAGACTAGTGGAGAGCACTGATGGGTGGGAGACAGCTTCAGTTGTGGGAAAGTTCTCGGGGCCTAAGCATCGGTTGGCCACAGCAGCAACTGTTAAGGACGGGAAGGTGTATCTCAACCACATGGTTGCCATGGGATACCCAAAAAAGAAGCATGTCATTGTTGAGGCAGTTTTTACTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SGL

Protein Analysis

329

Amino Acids

35.85

Weight (kDa)

7.14

Isoelectric Point (pI)

20.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G16760 AT2G47370 AT2G47370 AT5G28660
fragaria_vesca FvH4_5g39130
malus_domestica MD03G1294500.v1.1
prunus_persica Prupe.8G266600_v2.0.a1
pyrus_communis pycom03g23290
rosa_chinensis RchiOBHm_Chr7g0241121
rosa_laevigata RLG00000000595
rosa_multiflora Rmu_sc0008150.1_g000002
rosa_roxburghii Rroxscaffold_3G00219250
rosa_rugosa Rorug07G0342600
rosa_samantha Rh7AG497700 Rh7BG468500 Rh7CG514600 Rh7DG481900
rosa_wichuraiana Rw7G041990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 357
Acc16I TGCGCA 1 cut(s) 508
AccBSI CCGCTC 1 cut(s) 198
AccI GTMKAC 2 cut(s) 114, 805
AccII CGCG 1 cut(s) 144
AclWI GGATC 1 cut(s) 437
AcoI YGGCCR 3 cut(s) 208, 285, 879
AcsI RAATTY 1 cut(s) 740
AcuI CTGAAG 1 cut(s) 825
AcyI GRCGYC 1 cut(s) 354
AfaI GTAC 2 cut(s) 63, 593
AfiI CCNNNNNNNGG 1 cut(s) 135
AflIII ACRYGT 1 cut(s) 274
AgsI TTSAA 1 cut(s) 679
AhlI ACTAGT 1 cut(s) 808
AjiI CACGTC 1 cut(s) 112
AjnI CCWGG 1 cut(s) 401
AloI GAACNNNNNNTCC 2 cut(s) 530, 562
AluBI AGCT 4 cut(s) 91, 427, 778, 839
AluI AGCT 4 cut(s) 91, 427, 778, 839
Alw21I GWGCWC 2 cut(s) 93, 821
Alw26I GTCTC 3 cut(s) 190, 693, 827
AlwI GGATC 1 cut(s) 437
AlwNI CAGNNNCTG 1 cut(s) 893
Ama87I CYCGRG 3 cut(s) 86, 251, 859
AoxI GGCC 5 cut(s) 208, 285, 433, 863, 879
ApeKI GCWGC 3 cut(s) 15, 18, 887
ApoI RAATTY 1 cut(s) 740
AspLEI GCGC 4 cut(s) 152, 245, 377, 509
AspS9I GGNCC 3 cut(s) 406, 434, 863
AsuC2I CCSGG 2 cut(s) 240, 325
AsuHPI GGTGA 3 cut(s) 15, 334, 412
AvaI CYCGRG 3 cut(s) 86, 251, 859
AvaII GGWCC 1 cut(s) 406
BalI TGGCCA 2 cut(s) 287, 881
BanII GRGCYC 1 cut(s) 93
Bbv12I GWGCWC 2 cut(s) 93, 821
BbvI GCAGC 3 cut(s) 2, 5, 899
BccI CCATC 6 cut(s) 74, 533, 629, 743, 805, 818
BceAI ACGGC 1 cut(s) 44
BciT130I CCWGG 1 cut(s) 403
BciVI GTATCC 2 cut(s) 632, 932
BcnI CCSGG 2 cut(s) 240, 325
BcoDI GTCTC 3 cut(s) 190, 693, 827
BcuI ACTAGT 1 cut(s) 808
BfaI CTAG 2 cut(s) 438, 809
BfmI CTRYAG 1 cut(s) 370
BfoI RGCGCY 2 cut(s) 246, 378
BfuI GTATCC 2 cut(s) 632, 932
BlpI GCTNAGC 1 cut(s) 428
Bme1390I CCNGG 3 cut(s) 240, 325, 403
Bme18I GGWCC 1 cut(s) 406
BmeT110I CYCGRG 3 cut(s) 86, 251, 859
BmgBI CACGTC 1 cut(s) 112
BmgT120I GGNCC 3 cut(s) 406, 434, 863
BmiI GGNNCC 5 cut(s) 140, 329, 407, 794, 864
BmrFI CCNGG 3 cut(s) 240, 325, 403
BmsI GCATC 2 cut(s) 213, 880
Bpu10I CCTNAGC 1 cut(s) 867
Bpu1102I GCTNAGC 1 cut(s) 428
BpuMI CCSGG 2 cut(s) 240, 325
BsaHI GRCGYC 1 cut(s) 354
BsaJI CCNNGG 5 cut(s) 238, 264, 323, 402, 933
BsaXI ACNNNNNCTCC 4 cut(s) 380, 410, 690, 720
Bsc4I CCNNNNNNNGG 1 cut(s) 135
Bse118I RCCGGY 1 cut(s) 131
Bse3DI GCAATG 1 cut(s) 459
BseBI CCWGG 1 cut(s) 403
BseDI CCNNGG 5 cut(s) 238, 264, 323, 402, 933
BseGI GGATG 3 cut(s) 48, 234, 544
BseLI CCNNNNNNNGG 1 cut(s) 135
BseMI GCAATG 1 cut(s) 459
BseMII CTCAG 1 cut(s) 442
BseRI GAGGAG 2 cut(s) 269, 326
BseXI GCAGC 3 cut(s) 2, 5, 899
BseYI CCCAGC 3 cut(s) 423, 774, 788
Bsh1236I CGCG 1 cut(s) 144
Bsh1285I CGRYCG 1 cut(s) 319
BshFI GGCC 5 cut(s) 210, 287, 435, 865, 881
BsiEI CGRYCG 1 cut(s) 319
BsiHKAI GWGCWC 2 cut(s) 93, 821
BsiHKCI CYCGRG 3 cut(s) 86, 251, 859
BsiSI CCGG 3 cut(s) 132, 240, 325
BslFI GGGAC 3 cut(s) 173, 206, 419
BslI CCNNNNNNNGG 1 cut(s) 135
BsmAI GTCTC 3 cut(s) 190, 693, 827
BsmBI CGTCTC 2 cut(s) 190, 693
BsmFI GGGAC 3 cut(s) 173, 206, 419
BsnI GGCC 5 cut(s) 210, 287, 435, 865, 881
BsoBI CYCGRG 3 cut(s) 86, 251, 859
Bsp1286I GDGCHC 2 cut(s) 93, 821
Bsp143I GATC 4 cut(s) 163, 229, 442, 681
Bsp1720I GCTNAGC 1 cut(s) 428
Bsp19I CCATGG 1 cut(s) 933
BspANI GGCC 5 cut(s) 210, 287, 435, 865, 881
BspCNI CTCAG 1 cut(s) 441
BspFNI CGCG 1 cut(s) 144
BspHI TCATGA 1 cut(s) 192
BspLI GGNNCC 5 cut(s) 140, 329, 407, 794, 864
BspPI GGATC 1 cut(s) 437
BspQI GCTCTTC 1 cut(s) 41
BsrBI CCGCTC 1 cut(s) 198
BsrDI GCAATG 1 cut(s) 459
BsrFI RCCGGY 1 cut(s) 131
BssAI RCCGGY 1 cut(s) 131
BssECI CCNNGG 5 cut(s) 238, 264, 323, 402, 933
BssMI GATC 4 cut(s) 163, 229, 442, 681
BssNI GRCGYC 1 cut(s) 354
BssT1I CCWWGG 2 cut(s) 264, 933
Bst2UI CCWGG 1 cut(s) 403
Bst4CI ACNGT 1 cut(s) 895
Bst6I CTCTTC 4 cut(s) 41, 47, 419, 578
BstACI GRCGYC 1 cut(s) 354
BstC8I GCNNGC 3 cut(s) 93, 133, 511
BstDEI CTNAG 2 cut(s) 428, 867
BstDSI CCRYGG 1 cut(s) 933
BstF5I GGATG 3 cut(s) 48, 234, 544
BstFNI CGCG 1 cut(s) 144
BstH2I RGCGCY 2 cut(s) 246, 378
BstHHI GCGC 4 cut(s) 152, 245, 377, 509
BstKTI GATC 4 cut(s) 166, 232, 445, 684
BstMAI GTCTC 3 cut(s) 190, 693, 827
BstMBI GATC 4 cut(s) 163, 229, 442, 681
BstMCI CGRYCG 1 cut(s) 319
BstMWI GCNNNNNNNGC 6 cut(s) 18, 141, 207, 293, 383, 887
BstNI CCWGG 1 cut(s) 403
BstNSI RCATGY 1 cut(s) 959
BstSCI CCNGG 3 cut(s) 238, 323, 401
BstSFI CTRYAG 1 cut(s) 370
BstUI CGCG 1 cut(s) 144
BstV1I GCAGC 3 cut(s) 2, 5, 899
BstXI CCANNNNNNTGG 2 cut(s) 588, 635
BsuI GTATCC 2 cut(s) 632, 932
BsuRI GGCC 5 cut(s) 210, 287, 435, 865, 881
BtgI CCRYGG 1 cut(s) 933
BtgZI GCGATG 1 cut(s) 52
BtrI CACGTC 1 cut(s) 112
BtsCI GGATG 3 cut(s) 48, 234, 544
BtsIMutI CAGTG 2 cut(s) 734, 819
Cac8I GCNNGC 3 cut(s) 93, 133, 511
CaiI CAGNNNCTG 1 cut(s) 893
CciI TCATGA 1 cut(s) 192
CfoI GCGC 4 cut(s) 152, 245, 377, 509
Cfr10I RCCGGY 1 cut(s) 131
Cfr13I GGNCC 3 cut(s) 406, 434, 863
Csp6I GTAC 2 cut(s) 62, 592
CviAII CATG 5 cut(s) 193, 358, 925, 934, 956
CviQI GTAC 2 cut(s) 62, 592
DdeI CTNAG 2 cut(s) 428, 867
DpnI GATC 4 cut(s) 165, 231, 444, 683
DpnII GATC 4 cut(s) 163, 229, 442, 681
EaeI YGGCCR 3 cut(s) 208, 285, 879
Eam1104I CTCTTC 4 cut(s) 41, 47, 419, 578
EarI CTCTTC 4 cut(s) 41, 47, 419, 578
EciI GGCGGA 1 cut(s) 46
Ecl136II GAGCTC 1 cut(s) 91
Eco130I CCWWGG 2 cut(s) 264, 933
Eco24I GRGCYC 1 cut(s) 93
Eco47I GGWCC 1 cut(s) 406
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 1 cut(s) 825
Eco88I CYCGRG 3 cut(s) 86, 251, 859
EcoICRI GAGCTC 1 cut(s) 91
EcoO109I RGGNCCY 1 cut(s) 863
EcoRII CCWGG 1 cut(s) 401
EcoT14I CCWWGG 2 cut(s) 264, 933
EcoT22I ATGCAT 1 cut(s) 493
EcoT38I GRGCYC 1 cut(s) 93
ErhI CCWWGG 2 cut(s) 264, 933
Esp3I CGTCTC 2 cut(s) 190, 693
FaeI CATG 5 cut(s) 196, 361, 928, 937, 959
FaiI YATR 8 cut(s) 194, 359, 493, 495, 689, 926, 935, 957
FaqI GGGAC 3 cut(s) 173, 206, 419
FatI CATG 5 cut(s) 192, 357, 924, 933, 955
FauI CCCGC 1 cut(s) 232
FauNDI CATATG 1 cut(s) 493
FblI GTMKAC 2 cut(s) 114, 805
FokI GGATG 3 cut(s) 35, 221, 551
FriOI GRGCYC 1 cut(s) 93
FspBI CTAG 2 cut(s) 438, 809
FspI TGCGCA 1 cut(s) 508
GlaI GCGC 4 cut(s) 151, 244, 376, 508
GsaI CCCAGC 3 cut(s) 427, 778, 792
HaeII RGCGCY 2 cut(s) 246, 378
HaeIII GGCC 5 cut(s) 210, 287, 435, 865, 881
HapII CCGG 3 cut(s) 132, 240, 325
HhaI GCGC 4 cut(s) 152, 245, 377, 509
Hin1I GRCGYC 1 cut(s) 354
Hin1II CATG 5 cut(s) 196, 361, 928, 937, 959
Hin6I GCGC 4 cut(s) 150, 243, 375, 507
HinP1I GCGC 4 cut(s) 150, 243, 375, 507
HincII GTYRAC 1 cut(s) 280
HindII GTYRAC 1 cut(s) 280
HinfI GANTC 4 cut(s) 214, 257, 476, 618
HpaII CCGG 3 cut(s) 132, 240, 325
HphI GGTGA 3 cut(s) 15, 334, 412
Hpy166II GTNNAC 6 cut(s) 115, 261, 280, 625, 734, 806
Hpy188I TCNGA 2 cut(s) 447, 481
Hpy188III TCNNGA 4 cut(s) 86, 193, 251, 679
Hpy8I GTNNAC 6 cut(s) 115, 261, 280, 625, 734, 806
HpyAV CCTTC 5 cut(s) 199, 476, 520, 722, 901
HpyCH4III ACNGT 1 cut(s) 895
HpyCH4IV ACGT 3 cut(s) 111, 276, 354
HpyCH4V TGCA 2 cut(s) 470, 491
HpyF10VI GCNNNNNNNGC 6 cut(s) 18, 141, 207, 293, 383, 887
HpyF3I CTNAG 2 cut(s) 428, 867
HpySE526I ACGT 3 cut(s) 111, 276, 354
Hsp92I GRCGYC 1 cut(s) 354
Hsp92II CATG 5 cut(s) 196, 361, 928, 937, 959
HspAI GCGC 4 cut(s) 150, 243, 375, 507
KroI GCCGGC 1 cut(s) 131
KroNI GCCGGC 1 cut(s) 133
Kzo9I GATC 4 cut(s) 163, 229, 442, 681
LguI GCTCTTC 1 cut(s) 41
Lsp1109I GCAGC 3 cut(s) 2, 5, 899
LweI GCATC 2 cut(s) 213, 880
MaeI CTAG 2 cut(s) 438, 809
MaeII ACGT 3 cut(s) 111, 276, 354
MaeIII GTNAC 2 cut(s) 340, 496
MalI GATC 4 cut(s) 165, 231, 444, 683
MbiI CCGCTC 1 cut(s) 198
MboI GATC 4 cut(s) 163, 229, 442, 681
MboII GAAGA 5 cut(s) 28, 34, 37, 406, 565
MhlI GDGCHC 2 cut(s) 93, 821
MlsI TGGCCA 2 cut(s) 287, 881
MluCI AATT 3 cut(s) 670, 714, 740
MluNI TGGCCA 2 cut(s) 287, 881
MlyI GAGTC 1 cut(s) 266
MmeI TCCRAC 2 cut(s) 511, 794
Mox20I TGGCCA 2 cut(s) 287, 881
Mph1103I ATGCAT 1 cut(s) 493
MroNI GCCGGC 1 cut(s) 131
MscI TGGCCA 2 cut(s) 287, 881
MseI TTAA 4 cut(s) 611, 717, 897, 985
MslI CAYNNNNRTG 1 cut(s) 633
Msp20I TGGCCA 2 cut(s) 287, 881
MspA1I CMGCKG 4 cut(s) 15, 350, 432, 666
MspI CCGG 3 cut(s) 132, 240, 325
MspR9I CCNGG 3 cut(s) 240, 325, 403
MvaI CCWGG 1 cut(s) 403
MvnI CGCG 1 cut(s) 144
MwoI GCNNNNNNNGC 6 cut(s) 18, 141, 207, 293, 383, 887
NaeI GCCGGC 1 cut(s) 133
NciI CCSGG 2 cut(s) 240, 325
NcoI CCATGG 1 cut(s) 933
NdeI CATATG 1 cut(s) 493
NdeII GATC 4 cut(s) 163, 229, 442, 681
NgoMIV GCCGGC 1 cut(s) 131
NlaIII CATG 5 cut(s) 196, 361, 928, 937, 959
NlaIV GGNNCC 5 cut(s) 140, 329, 407, 794, 864
NmeAIII GCCGAG 1 cut(s) 282
NmuCI GTSAC 2 cut(s) 340, 496
NsbI TGCGCA 1 cut(s) 508
NsiI ATGCAT 1 cut(s) 493
NspI RCATGY 1 cut(s) 959
PaeR7I CTCGAG 2 cut(s) 86, 251
PagI TCATGA 1 cut(s) 192
PciSI GCTCTTC 1 cut(s) 41
PcsI WCGNNNNNNNCGW 1 cut(s) 387
PdiI GCCGGC 1 cut(s) 133
PfeI GAWTC 3 cut(s) 214, 476, 618
PleI GAGTC 1 cut(s) 265
PpsI GAGTC 1 cut(s) 265
Psp124BI GAGCTC 1 cut(s) 93
Psp6I CCWGG 1 cut(s) 401
PspFI CCCAGC 3 cut(s) 423, 774, 788
PspGI CCWGG 1 cut(s) 401
PspN4I GGNNCC 5 cut(s) 140, 329, 407, 794, 864
PspPI GGNCC 3 cut(s) 406, 434, 863
PstNI CAGNNNCTG 1 cut(s) 893
RsaI GTAC 2 cut(s) 63, 593
RsaNI GTAC 2 cut(s) 62, 592
RseI CAYNNNNRTG 1 cut(s) 633
SacI GAGCTC 1 cut(s) 93
SapI GCTCTTC 1 cut(s) 41
SaqAI TTAA 4 cut(s) 611, 717, 897, 985
Sau3AI GATC 4 cut(s) 163, 229, 442, 681
Sau96I GGNCC 3 cut(s) 406, 434, 863
SchI GAGTC 1 cut(s) 266
ScrFI CCNGG 3 cut(s) 240, 325, 403
SduI GDGCHC 2 cut(s) 93, 821
SfaNI GCATC 2 cut(s) 213, 880
SfcI CTRYAG 1 cut(s) 370
Sfr274I CTCGAG 2 cut(s) 86, 251
SinI GGWCC 1 cut(s) 406
SlaI CTCGAG 2 cut(s) 86, 251
SmiMI CAYNNNNRTG 1 cut(s) 633
SmlI CTYRAG 2 cut(s) 86, 251
SmoI CTYRAG 2 cut(s) 86, 251
SpeI ACTAGT 1 cut(s) 808
Sse9I AATT 3 cut(s) 670, 714, 740
SspMI CTAG 2 cut(s) 438, 809
SstI GAGCTC 1 cut(s) 93
StyD4I CCNGG 3 cut(s) 238, 323, 401
StyI CCWWGG 2 cut(s) 264, 933
TaaI ACNGT 1 cut(s) 895
TaiI ACGT 3 cut(s) 114, 279, 357
TaqI TCGA 5 cut(s) 87, 252, 315, 474, 684
TasI AATT 3 cut(s) 670, 714, 740
TauI GCSGC 9 cut(s) 15, 98, 131, 177, 201, 204, 386, 435, 669
TfiI GAWTC 3 cut(s) 214, 476, 618
Tru1I TTAA 4 cut(s) 611, 717, 897, 985
Tru9I TTAA 4 cut(s) 611, 717, 897, 985
TscAI CASTG 2 cut(s) 741, 826
TseFI GTSAC 2 cut(s) 340, 496
TseI GCWGC 3 cut(s) 15, 18, 887
Tsp45I GTSAC 2 cut(s) 340, 496
TspDTI ATGAA 3 cut(s) 37, 181, 298
TspRI CASTG 2 cut(s) 741, 826
VpaK11BI GGWCC 1 cut(s) 406
XapI RAATTY 1 cut(s) 740
XceI RCATGY 1 cut(s) 959
XhoI CTCGAG 2 cut(s) 86, 251
XmiI GTMKAC 2 cut(s) 114, 805
XspI CTAG 2 cut(s) 438, 809
ZraI GACGTC 1 cut(s) 355
Zsp2I ATGCAT 1 cut(s) 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.