Rw7G041990
ERF Family

Calcium-dependent phosphotriesterase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0013143
Physical Location & Seq
Reverse (-)
65626704 .. 65629122
2419 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G041990.1

Sequence Viewer

Length: 987 bp
ATGGCGCTCTGCTGGTGCTGTTCTCCCAGATGCCTCTTGCTCTTCTTCTTACTCTCCGCCGTCCCCGTCGCCTACCTCATCTCCCTCGAGCTCGCCGCCCCCACCACCCACGTCTACCACTACCACTCCGCCGGCTGGTTCCGCGAGTGCGCCAAGTGGGACGATCTCAACCGTCGCTTCCTCGTCTCCTTCATAGACGGCGGCATCGGCCAGATTCCCGTCCCCGACGATCACACCCCCGGCGCTGTCCTCGAGGAGCTCCCCTTAGTCAAACACGTAGACTTGGCCAAAAACGCTTCCCTCGGATTCGTCATCGACCGCCCCAGGAACCGCCTCCTCGTCGCCACCGCTGACGTCATGGGCAACCGCTACAGCGCCCTCGCCGCCTACGACCTCTCCACGTGGAACCGCCTCTTCCTCACCCAGCTCAGCGGCCCAAGTGATCCAAAAGCATTCGCAGATGATGTTGCAGTCGATTCAGAAGGTAATGCATACGTGACAGATTGCACAGGCAGTTTTATTTGGAAGGTTGGAGTGGATGGCAAGTTCCTATCAACTATCAAAAGTCCTCTCTTCACTCCAAAAGAGTGGTACAAAGCCATTGTTGGCCTAAATGGAATCGTTTATCACCCAGATGGATACTTGATTGTTATTCACACTTTCAGCGGCAATTTGTTCAAGATCGACATATCAAAGGGAGACGAAGTGAAGCAAATCAAGGTCATTGAAGGTTCGCTAAAATTTGGAGATGGTCTAGAGCTACTATCTCCAACGCAGATTGTAGTTGCTGGGAACCCATCTGGTAGACTAGTGGAGAGCACTGATGGGTGGGAGACGGCTTCAGTTGTCGGAAAGTTCTCAGGGCCTAAGCATCGGTTGGCCACAGCAGCAACTGTTAAGGACGGGAAGGTGTATCTCAACCACATGGTTGCCATGGGATACCCGAAGAAGAAGCATGCCATTGTTGAGGCAGTCTTTTCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SGL

Protein Analysis

328

Amino Acids

35.85

Weight (kDa)

6.79

Isoelectric Point (pI)

21.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013143)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G16760 AT2G47370 AT2G47370 AT5G28660
fragaria_vesca FvH4_5g39130
malus_domestica MD03G1294500.v1.1
prunus_persica Prupe.8G266600_v2.0.a1
pyrus_communis pycom03g23290
rosa_chinensis RchiOBHm_Chr7g0241121
rosa_laevigata RLG00000000595
rosa_multiflora Rmu_sc0008150.1_g000002
rosa_roxburghii Rroxscaffold_3G00219250
rosa_rugosa Rorug07G0342600
rosa_samantha Rh7AG497700 Rh7BG468500 Rh7CG514600 Rh7DG481900
rosa_wichuraiana Rw7G041990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 357
AbsI CCTCGAGG 1 cut(s) 251
AccI GTMKAC 3 cut(s) 114, 279, 805
AccII CGCG 1 cut(s) 144
AclWI GGATC 1 cut(s) 437
AcoI YGGCCR 3 cut(s) 208, 285, 879
AcsI RAATTY 1 cut(s) 740
AcuI CTGAAG 1 cut(s) 825
AcvI CACGTG 1 cut(s) 402
AcyI GRCGYC 1 cut(s) 354
AfaI GTAC 1 cut(s) 593
AfiI CCNNNNNNNGG 1 cut(s) 135
AflIII ACRYGT 1 cut(s) 274
AgsI TTSAA 2 cut(s) 679, 728
AhlI ACTAGT 1 cut(s) 808
AjiI CACGTC 1 cut(s) 112
AjnI CCWGG 1 cut(s) 323
AloI GAACNNNNNNTCC 2 cut(s) 530, 562
AluBI AGCT 4 cut(s) 91, 259, 427, 760
AluI AGCT 4 cut(s) 91, 259, 427, 760
Alw21I GWGCWC 3 cut(s) 93, 261, 821
Alw26I GTCTC 3 cut(s) 190, 693, 827
AlwI GGATC 1 cut(s) 437
AlwNI CAGNNNCTG 1 cut(s) 893
Ama87I CYCGRG 2 cut(s) 86, 251
AoxI GGCC 6 cut(s) 208, 285, 433, 607, 863, 879
ApeKI GCWGC 1 cut(s) 887
ApoI RAATTY 1 cut(s) 740
AspLEI GCGC 4 cut(s) 7, 152, 245, 377
AspS9I GGNCC 2 cut(s) 434, 863
AsuC2I CCSGG 1 cut(s) 240
AsuHPI GGTGA 2 cut(s) 412, 620
AvaI CYCGRG 2 cut(s) 86, 251
BalI TGGCCA 2 cut(s) 287, 881
BanII GRGCYC 2 cut(s) 93, 261
BbrPI CACGTG 1 cut(s) 402
Bbv12I GWGCWC 3 cut(s) 93, 261, 821
BbvI GCAGC 1 cut(s) 899
BccI CCATC 5 cut(s) 533, 629, 743, 805, 818
BceAI ACGGC 3 cut(s) 44, 214, 852
BciT130I CCWGG 1 cut(s) 325
BciVI GTATCC 2 cut(s) 632, 932
BcnI CCSGG 1 cut(s) 240
BcoDI GTCTC 3 cut(s) 190, 693, 827
BcuI ACTAGT 1 cut(s) 808
BfaI CTAG 2 cut(s) 755, 809
BfmI CTRYAG 1 cut(s) 370
BfoI RGCGCY 3 cut(s) 8, 246, 378
BfuI GTATCC 2 cut(s) 632, 932
BisI GCNGC 6 cut(s) 96, 202, 384, 433, 667, 888
BlpI GCTNAGC 1 cut(s) 428
BlsI GCNGC 6 cut(s) 97, 203, 385, 434, 668, 889
Bme1390I CCNGG 2 cut(s) 240, 325
BmeT110I CYCGRG 2 cut(s) 86, 251
BmgBI CACGTC 1 cut(s) 112
BmgT120I GGNCC 2 cut(s) 434, 863
BmiI GGNNCC 4 cut(s) 140, 329, 407, 794
BmrFI CCNGG 2 cut(s) 240, 325
BmsI GCATC 3 cut(s) 20, 213, 880
Bpu10I CCTNAGC 1 cut(s) 867
Bpu1102I GCTNAGC 1 cut(s) 428
BpuMI CCSGG 1 cut(s) 240
BsaAI YACGTR 3 cut(s) 277, 402, 496
BsaHI GRCGYC 1 cut(s) 354
BsaJI CCNNGG 4 cut(s) 238, 301, 323, 933
BsaXI ACNNNNNCTCC 8 cut(s) 65, 95, 110, 140, 380, 410, 690, 720
Bsc4I CCNNNNNNNGG 1 cut(s) 135
Bse118I RCCGGY 1 cut(s) 131
BseBI CCWGG 1 cut(s) 325
BseDI CCNNGG 4 cut(s) 238, 301, 323, 933
BseGI GGATG 1 cut(s) 544
BseLI CCNNNNNNNGG 1 cut(s) 135
BseMII CTCAG 2 cut(s) 442, 873
BseRI GAGGAG 2 cut(s) 269, 326
BseXI GCAGC 1 cut(s) 899
BseYI CCCAGC 2 cut(s) 423, 788
Bsh1236I CGCG 1 cut(s) 144
Bsh1285I CGRYCG 1 cut(s) 319
BshFI GGCC 6 cut(s) 210, 287, 435, 609, 865, 881
BsiEI CGRYCG 1 cut(s) 319
BsiHKAI GWGCWC 3 cut(s) 93, 261, 821
BsiHKCI CYCGRG 2 cut(s) 86, 251
BsiSI CCGG 2 cut(s) 132, 240
BslFI GGGAC 3 cut(s) 47, 173, 206
BslI CCNNNNNNNGG 1 cut(s) 135
BsmAI GTCTC 3 cut(s) 190, 693, 827
BsmBI CGTCTC 3 cut(s) 190, 693, 827
BsmFI GGGAC 3 cut(s) 47, 173, 206
BsmI GAATGC 1 cut(s) 452
BsnI GGCC 6 cut(s) 210, 287, 435, 609, 865, 881
BsoBI CYCGRG 2 cut(s) 86, 251
Bsp1286I GDGCHC 3 cut(s) 93, 261, 821
Bsp143I GATC 4 cut(s) 163, 229, 442, 681
Bsp1720I GCTNAGC 1 cut(s) 428
Bsp19I CCATGG 1 cut(s) 933
BspANI GGCC 6 cut(s) 210, 287, 435, 609, 865, 881
BspCNI CTCAG 2 cut(s) 441, 872
BspFNI CGCG 1 cut(s) 144
BspLI GGNNCC 4 cut(s) 140, 329, 407, 794
BspPI GGATC 1 cut(s) 437
BspQI GCTCTTC 1 cut(s) 47
BsrFI RCCGGY 1 cut(s) 131
BssAI RCCGGY 1 cut(s) 131
BssECI CCNNGG 4 cut(s) 238, 301, 323, 933
BssMI GATC 4 cut(s) 163, 229, 442, 681
BssNI GRCGYC 1 cut(s) 354
BssT1I CCWWGG 1 cut(s) 933
Bst2UI CCWGG 1 cut(s) 325
Bst4CI ACNGT 2 cut(s) 173, 895
Bst6I CTCTTC 3 cut(s) 47, 419, 578
BstACI GRCGYC 1 cut(s) 354
BstBAI YACGTR 3 cut(s) 277, 402, 496
BstC8I GCNNGC 3 cut(s) 93, 133, 957
BstDEI CTNAG 4 cut(s) 265, 428, 859, 867
BstDSI CCRYGG 1 cut(s) 933
BstF5I GGATG 1 cut(s) 544
BstFNI CGCG 1 cut(s) 144
BstH2I RGCGCY 3 cut(s) 8, 246, 378
BstHHI GCGC 4 cut(s) 7, 152, 245, 377
BstKTI GATC 4 cut(s) 166, 232, 445, 684
BstMAI GTCTC 3 cut(s) 190, 693, 827
BstMBI GATC 4 cut(s) 163, 229, 442, 681
BstMCI CGRYCG 1 cut(s) 319
BstMWI GCNNNNNNNGC 5 cut(s) 141, 207, 293, 383, 887
BstNI CCWGG 1 cut(s) 325
BstNSI RCATGY 1 cut(s) 959
BstSCI CCNGG 2 cut(s) 238, 323
BstSFI CTRYAG 1 cut(s) 370
BstUI CGCG 1 cut(s) 144
BstV1I GCAGC 1 cut(s) 899
BstXI CCANNNNNNTGG 1 cut(s) 588
BsuI GTATCC 2 cut(s) 632, 932
BsuRI GGCC 6 cut(s) 210, 287, 435, 609, 865, 881
BtgI CCRYGG 1 cut(s) 933
BtrI CACGTC 1 cut(s) 112
BtsCI GGATG 1 cut(s) 544
BtsIMutI CAGTG 1 cut(s) 819
Cac8I GCNNGC 3 cut(s) 93, 133, 957
CaiI CAGNNNCTG 1 cut(s) 893
CfoI GCGC 4 cut(s) 7, 152, 245, 377
Cfr10I RCCGGY 1 cut(s) 131
Cfr13I GGNCC 2 cut(s) 434, 863
Csp6I GTAC 1 cut(s) 592
CviAII CATG 4 cut(s) 358, 925, 934, 956
CviQI GTAC 1 cut(s) 592
DdeI CTNAG 4 cut(s) 265, 428, 859, 867
DpnI GATC 4 cut(s) 165, 231, 444, 683
DpnII GATC 4 cut(s) 163, 229, 442, 681
EaeI YGGCCR 3 cut(s) 208, 285, 879
Eam1104I CTCTTC 3 cut(s) 47, 419, 578
EarI CTCTTC 3 cut(s) 47, 419, 578
EciI GGCGGA 2 cut(s) 46, 118
Ecl136II GAGCTC 2 cut(s) 91, 259
Eco130I CCWWGG 1 cut(s) 933
Eco24I GRGCYC 2 cut(s) 93, 261
Eco53kI GAGCTC 2 cut(s) 91, 259
Eco57I CTGAAG 1 cut(s) 825
Eco72I CACGTG 1 cut(s) 402
Eco88I CYCGRG 2 cut(s) 86, 251
EcoICRI GAGCTC 2 cut(s) 91, 259
EcoO109I RGGNCCY 1 cut(s) 863
EcoRII CCWGG 1 cut(s) 323
EcoT14I CCWWGG 1 cut(s) 933
EcoT22I ATGCAT 1 cut(s) 493
EcoT38I GRGCYC 2 cut(s) 93, 261
ErhI CCWWGG 1 cut(s) 933
Esp3I CGTCTC 3 cut(s) 190, 693, 827
FaeI CATG 4 cut(s) 361, 928, 937, 959
FaiI YATR 7 cut(s) 194, 359, 493, 689, 926, 935, 957
FaqI GGGAC 3 cut(s) 47, 173, 206
FatI CATG 4 cut(s) 357, 924, 933, 955
FblI GTMKAC 3 cut(s) 114, 279, 805
Fnu4HI GCNGC 6 cut(s) 96, 202, 384, 433, 667, 888
FokI GGATG 1 cut(s) 551
FriOI GRGCYC 2 cut(s) 93, 261
Fsp4HI GCNGC 6 cut(s) 96, 202, 384, 433, 667, 888
FspBI CTAG 2 cut(s) 755, 809
GlaI GCGC 4 cut(s) 6, 151, 244, 376
GluI GCNGC 6 cut(s) 96, 202, 384, 433, 667, 888
GsaI CCCAGC 2 cut(s) 427, 792
HaeII RGCGCY 3 cut(s) 8, 246, 378
HaeIII GGCC 6 cut(s) 210, 287, 435, 609, 865, 881
HapII CCGG 2 cut(s) 132, 240
HhaI GCGC 4 cut(s) 7, 152, 245, 377
Hin1I GRCGYC 1 cut(s) 354
Hin1II CATG 4 cut(s) 361, 928, 937, 959
Hin6I GCGC 4 cut(s) 5, 150, 243, 375
HinP1I GCGC 4 cut(s) 5, 150, 243, 375
HinfI GANTC 4 cut(s) 214, 306, 476, 618
HpaII CCGG 2 cut(s) 132, 240
HphI GGTGA 2 cut(s) 412, 620
Hpy166II GTNNAC 3 cut(s) 115, 280, 806
Hpy188I TCNGA 3 cut(s) 305, 481, 851
Hpy188III TCNNGA 2 cut(s) 679, 755
Hpy8I GTNNAC 3 cut(s) 115, 280, 806
Hpy99I CGWCG 4 cut(s) 71, 177, 230, 344
HpyAV CCTTC 5 cut(s) 199, 476, 520, 722, 901
HpyCH4III ACNGT 2 cut(s) 173, 895
HpyCH4IV ACGT 5 cut(s) 111, 276, 354, 401, 495
HpyCH4V TGCA 3 cut(s) 470, 491, 507
HpyF10VI GCNNNNNNNGC 5 cut(s) 141, 207, 293, 383, 887
HpyF3I CTNAG 4 cut(s) 265, 428, 859, 867
HpySE526I ACGT 5 cut(s) 111, 276, 354, 401, 495
Hsp92I GRCGYC 1 cut(s) 354
Hsp92II CATG 4 cut(s) 361, 928, 937, 959
HspAI GCGC 4 cut(s) 5, 150, 243, 375
KroI GCCGGC 1 cut(s) 131
KroNI GCCGGC 1 cut(s) 133
Kzo9I GATC 4 cut(s) 163, 229, 442, 681
LguI GCTCTTC 1 cut(s) 47
LmnI GCTCC 2 cut(s) 256, 264
Lsp1109I GCAGC 1 cut(s) 899
LweI GCATC 3 cut(s) 20, 213, 880
MaeI CTAG 2 cut(s) 755, 809
MaeII ACGT 5 cut(s) 111, 276, 354, 401, 495
MaeIII GTNAC 1 cut(s) 496
MalI GATC 4 cut(s) 165, 231, 444, 683
MboI GATC 4 cut(s) 163, 229, 442, 681
MboII GAAGA 6 cut(s) 34, 37, 406, 565, 958, 961
MhlI GDGCHC 3 cut(s) 93, 261, 821
MlsI TGGCCA 2 cut(s) 287, 881
MluCI AATT 2 cut(s) 670, 740
MluNI TGGCCA 2 cut(s) 287, 881
MmeI TCCRAC 3 cut(s) 511, 794, 829
Mox20I TGGCCA 2 cut(s) 287, 881
Mph1103I ATGCAT 1 cut(s) 493
MroNI GCCGGC 1 cut(s) 131
MscI TGGCCA 2 cut(s) 287, 881
MseI TTAA 2 cut(s) 897, 985
MslI CAYNNNNRTG 1 cut(s) 633
Msp20I TGGCCA 2 cut(s) 287, 881
MspA1I CMGCKG 3 cut(s) 350, 432, 666
MspI CCGG 2 cut(s) 132, 240
MspR9I CCNGG 2 cut(s) 240, 325
Mva1269I GAATGC 1 cut(s) 452
MvaI CCWGG 1 cut(s) 325
MvnI CGCG 1 cut(s) 144
MwoI GCNNNNNNNGC 5 cut(s) 141, 207, 293, 383, 887
NaeI GCCGGC 1 cut(s) 133
NciI CCSGG 1 cut(s) 240
NcoI CCATGG 1 cut(s) 933
NdeII GATC 4 cut(s) 163, 229, 442, 681
NgoMIV GCCGGC 1 cut(s) 131
NlaIII CATG 4 cut(s) 361, 928, 937, 959
NlaIV GGNNCC 4 cut(s) 140, 329, 407, 794
NmuCI GTSAC 1 cut(s) 496
NsiI ATGCAT 1 cut(s) 493
NspI RCATGY 1 cut(s) 959
PaeI GCATGC 1 cut(s) 959
PaeR7I CTCGAG 2 cut(s) 86, 251
PciSI GCTCTTC 1 cut(s) 47
PcsI WCGNNNNNNNCGW 1 cut(s) 387
PctI GAATGC 1 cut(s) 452
PdiI GCCGGC 1 cut(s) 133
PfeI GAWTC 4 cut(s) 214, 306, 476, 618
PkrI GCNGC 6 cut(s) 97, 203, 385, 434, 668, 889
PmaCI CACGTG 1 cut(s) 402
PmlI CACGTG 1 cut(s) 402
Ppu21I YACGTR 3 cut(s) 277, 402, 496
Psp124BI GAGCTC 2 cut(s) 93, 261
Psp6I CCWGG 1 cut(s) 323
PspCI CACGTG 1 cut(s) 402
PspFI CCCAGC 2 cut(s) 423, 788
PspGI CCWGG 1 cut(s) 323
PspN4I GGNNCC 4 cut(s) 140, 329, 407, 794
PspPI GGNCC 2 cut(s) 434, 863
PspXI VCTCGAGB 2 cut(s) 86, 251
PstNI CAGNNNCTG 1 cut(s) 893
RsaI GTAC 1 cut(s) 593
RsaNI GTAC 1 cut(s) 592
RseI CAYNNNNRTG 1 cut(s) 633
SacI GAGCTC 2 cut(s) 93, 261
SapI GCTCTTC 1 cut(s) 47
SaqAI TTAA 2 cut(s) 897, 985
SatI GCNGC 6 cut(s) 96, 202, 384, 433, 667, 888
Sau3AI GATC 4 cut(s) 163, 229, 442, 681
Sau96I GGNCC 2 cut(s) 434, 863
ScrFI CCNGG 2 cut(s) 240, 325
SduI GDGCHC 3 cut(s) 93, 261, 821
SfaNI GCATC 3 cut(s) 20, 213, 880
SfcI CTRYAG 1 cut(s) 370
Sfr274I CTCGAG 2 cut(s) 86, 251
SlaI CTCGAG 2 cut(s) 86, 251
SmiMI CAYNNNNRTG 1 cut(s) 633
SmlI CTYRAG 2 cut(s) 86, 251
SmoI CTYRAG 2 cut(s) 86, 251
SpeI ACTAGT 1 cut(s) 808
SphI GCATGC 1 cut(s) 959
Sse9I AATT 2 cut(s) 670, 740
SspMI CTAG 2 cut(s) 755, 809
SstI GAGCTC 2 cut(s) 93, 261
StyD4I CCNGG 2 cut(s) 238, 323
StyI CCWWGG 1 cut(s) 933
TaaI ACNGT 2 cut(s) 173, 895
TaiI ACGT 5 cut(s) 114, 279, 357, 404, 498
TaqI TCGA 5 cut(s) 87, 252, 315, 474, 684
TasI AATT 2 cut(s) 670, 740
TauI GCSGC 5 cut(s) 98, 204, 386, 435, 669
TfiI GAWTC 4 cut(s) 214, 306, 476, 618
Tru1I TTAA 2 cut(s) 897, 985
Tru9I TTAA 2 cut(s) 897, 985
TscAI CASTG 1 cut(s) 826
TseFI GTSAC 1 cut(s) 496
TseI GCWGC 1 cut(s) 887
Tsp45I GTSAC 1 cut(s) 496
TspDTI ATGAA 1 cut(s) 181
TspRI CASTG 1 cut(s) 826
XapI RAATTY 1 cut(s) 740
XbaI TCTAGA 1 cut(s) 754
XceI RCATGY 1 cut(s) 959
XhoI CTCGAG 2 cut(s) 86, 251
XmiI GTMKAC 3 cut(s) 114, 279, 805
XspI CTAG 2 cut(s) 755, 809
ZraI GACGTC 1 cut(s) 355
Zsp2I ATGCAT 1 cut(s) 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.