AT2G47850

zinc finger

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
19595529 .. 19598664
3136 bp
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UTR
Exon/CDS
Intron
AT2G47850.4

Sequence Viewer

Length: 1407 bp
ATGTATGCTCGCAATCCTCCCCTCAATGGCTCACAATCTGCTCAAGCTCCCGACTGGACCCCTGCAGATGCCGATACCGGACTCCAAGAATCGATGTGGCGATTAGGGTTGGGTAGCGACTCGTACCCTGAGAGACCAGGTGCTCCTGACTGTGCCTACTACATGCGAACTGGTGTCTGTGGCTACGGTAATAGATGTCGTTACAATCACCCTCGCGATCGTGCCTCGGTTGAAGCAACTGTTAGAGCTACCGGGCAGTATCCTGAACGTTTTGGTGAACCCCCATGCCAGTTTTACTTGAAAACTGGAACTTGTAAATTTGGGGCGTCATGCAAATTCCACCATCCAAAGAATGCAGGTGGATCCATGAGCCACGTTCCACTAAATATATATGGATACCCTGTACGAGAGGGTGATAACGAATGCTCCTACTATTTGAAAACGGGGCAATGCAAATTTGGTATAACCTGTAAATTTCATCATCCTCAGCCTGCTGGTACTACTGTCCCACCACCACCAGCATCTGCACCTCAGTTTTATCCATCGGTGCAGTCACTTATGCCTGACCAGTATGGAGGTCCATCTTCTAGCTTGAGAGTTGCAAGAACTCTTCTTCCTGGTTCTTATATGCAAGGCGCCTATGGTCCAATGCTATTAACCCCCGGGGTCGTTCCTATTCCAGGCTGGAGTCCTTACTCGGCACCTGTGAGCCCTGCTCTATCTCCTGGTGCGCAGCACGCTGTTGGGGCAACTTCTTTATATGGAGTTACACAGCTCACTTCCACCACTCCTTCGCTTCCCGGGGTTTATCCATCTCTGTCCTCTCCTACAGGTGTTATACAGAAAGAACAGGCCTTTCCAGAGAGACCTGGTGAACCAGAGTGCCAATACTATTTGAAAACAGGAGATTGTAAGTTTGGAACATCTTGTAAGTTTCATCATCCTCGAGATCGGGTTCCACCAAGAGCGAATTGCGTCCTCAGCCCCATTGGTCTTCCTCTACGCCCGGGTGTGCAACGGTGCACTTTCTACGTACAAAACGGCTTCTGTAAGTTTGGATCAACATGTAAGTTTGATCATCCAATGGGAACGATCAGATACAATCCTTCTGCGTCCTCTCTAGCTGATGCACCGGTGGCTCCTTACCCAGTGAGCTCTCTCTTGGGTGCTCTGGCAGCTGCCCCTTCTTCTTCATCGACAGAGCTCATAGCAGGCGGTGCAAAAGATGCTTACATGACCGGTGTGCCTACATCAAGAAGCACATCAAACATCTCGGCAGGTTTGATTTTCTCCCAGAGCGGTGGGTCAATTCCATTCTCAGAGCTGCAACTCTCGAGCCAGAGCTCTCTTCCTCTAACAGGTAGCAGAATCACAAGACAAGGGCGTGAAATTCGTCGATCCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

468

Amino Acids

50.04

Weight (kDa)

9.03

Isoelectric Point (pI)

58.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 18 - 41 3e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 168 - 194 1e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 215 - 240 4.5e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 347
Acc16I TGCGCA 1 cut(s) 732
Acc36I ACCTGC 2 cut(s) 347, 1268
AccB1I GGYRCC 2 cut(s) 635, 700
AccBSI CCGCTC 1 cut(s) 1299
AccII CGCG 1 cut(s) 216
AciI CCGC 2 cut(s) 1215, 1299
AclI AACGTT 1 cut(s) 268
AclWI GGATC 4 cut(s) 357, 370, 1066, 1392
AcsI RAATTY 5 cut(s) 317, 335, 455, 473, 1389
AcyI GRCGYC 2 cut(s) 326, 636
AfaI GTAC 4 cut(s) 125, 405, 499, 1035
AfiI CCNNNNNNNGG 3 cut(s) 26, 680, 1358
AflIII ACRYGT 1 cut(s) 1064
AgeI ACCGGT 2 cut(s) 1132, 1238
AgsI TTSAA 4 cut(s) 233, 301, 439, 898
AjnI CCWGG 5 cut(s) 136, 616, 679, 724, 868
AloI GAACNNNNNNTCC 2 cut(s) 598, 630
Alw21I GWGCWC 6 cut(s) 145, 1025, 1157, 1171, 1206, 1346
Alw26I GTCTC 2 cut(s) 127, 859
Alw44I GTGCAC 1 cut(s) 1021
AlwI GGATC 4 cut(s) 357, 370, 1066, 1392
AlwNI CAGNNNCTG 1 cut(s) 524
Ama87I CYCGRG 5 cut(s) 662, 800, 945, 1006, 1333
AoxI GGCC 1 cut(s) 852
ApaLI GTGCAC 1 cut(s) 1021
ApeKI GCWGC 4 cut(s) 733, 1175, 1178, 1324
ApoI RAATTY 5 cut(s) 317, 335, 455, 473, 1389
AsiGI ACCGGT 2 cut(s) 1132, 1238
AspLEI GCGC 2 cut(s) 638, 733
AspS9I GGNCC 3 cut(s) 57, 578, 644
AsuC2I CCSGG 7 cut(s) 253, 663, 664, 801, 802, 1007, 1008
AsuHPI GGTGA 4 cut(s) 200, 287, 425, 884
AvaI CYCGRG 5 cut(s) 662, 800, 945, 1006, 1333
AvaII GGWCC 3 cut(s) 57, 578, 644
BaeGI GKGCMC 1 cut(s) 1025
BaeI ACNNNNGTAYC 2 cut(s) 489, 522
BamHI GGATCC 1 cut(s) 362
BanI GGYRCC 2 cut(s) 635, 700
BanII GRGCYC 4 cut(s) 713, 1157, 1206, 1346
BbsI GAAGAC 1 cut(s) 986
Bbv12I GWGCWC 6 cut(s) 145, 1025, 1157, 1171, 1206, 1346
BbvCI CCTCAGC 2 cut(s) 486, 980
BbvI GCAGC 4 cut(s) 745, 1165, 1187, 1311
BccI CCATC 4 cut(s) 351, 550, 589, 820
BceAI ACGGC 1 cut(s) 1057
BciT130I CCWGG 5 cut(s) 138, 618, 681, 726, 870
BciVI GTATCC 2 cut(s) 270, 389
BclI TGATCA 1 cut(s) 1075
BcnI CCSGG 7 cut(s) 253, 663, 664, 801, 802, 1007, 1008
BcoDI GTCTC 2 cut(s) 127, 859
BfaI CTAG 2 cut(s) 588, 1121
BfmI CTRYAG 2 cut(s) 63, 828
BfoI RGCGCY 1 cut(s) 639
BfuAI ACCTGC 2 cut(s) 347, 1268
BfuI GTATCC 2 cut(s) 270, 389
BisI GCNGC 4 cut(s) 734, 1176, 1179, 1325
BlsI GCNGC 4 cut(s) 735, 1177, 1180, 1326
Bme18I GGWCC 3 cut(s) 57, 578, 644
BmeT110I CYCGRG 5 cut(s) 662, 800, 945, 1006, 1333
BmgT120I GGNCC 3 cut(s) 57, 578, 644
BmiI GGNNCC 6 cut(s) 59, 364, 637, 702, 957, 1140
BmrI ACTGGG 1 cut(s) 1142
BmsI GCATC 4 cut(s) 58, 530, 1117, 1216
BmuI ACTGGG 1 cut(s) 1142
BpiI GAAGAC 1 cut(s) 986
BplI GAGNNNNNCTC 2 cut(s) 700, 732
BpmI CTGGAG 1 cut(s) 706
Bpu10I CCTNAGC 2 cut(s) 486, 980
BpuEI CTTGAG 2 cut(s) 27, 613
BpuMI CCSGG 7 cut(s) 253, 663, 664, 801, 802, 1007, 1008
Bsa29I ATCGAT 1 cut(s) 92
BsaAI YACGTR 1 cut(s) 1033
BsaHI GRCGYC 2 cut(s) 326, 636
BsaI GGTCTC 2 cut(s) 127, 859
BsaJI CCNNGG 7 cut(s) 225, 661, 662, 663, 800, 801, 1006
BsaWI WCCGGW 3 cut(s) 77, 1132, 1238
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 680, 1358
Bse118I RCCGGY 2 cut(s) 1132, 1238
Bse1I ACTGG 6 cut(s) 59, 175, 289, 310, 568, 1148
Bse3DI GCAATG 1 cut(s) 455
BseBI CCWGG 5 cut(s) 138, 618, 681, 726, 870
BseCI ATCGAT 1 cut(s) 92
BseDI CCNNGG 7 cut(s) 225, 661, 662, 663, 800, 801, 1006
BseGI GGATG 4 cut(s) 343, 481, 940, 1078
BseLI CCNNNNNNNGG 3 cut(s) 26, 680, 1358
BseMI GCAATG 1 cut(s) 455
BseMII CTCAG 5 cut(s) 120, 500, 545, 994, 1332
BseNI ACTGG 6 cut(s) 59, 175, 289, 310, 568, 1148
BseSI GKGCMC 1 cut(s) 1025
BseXI GCAGC 4 cut(s) 745, 1165, 1187, 1311
BsgI GTGCAG 2 cut(s) 510, 569
Bsh1236I CGCG 1 cut(s) 216
Bsh1285I CGRYCG 1 cut(s) 220
BshFI GGCC 1 cut(s) 854
BshNI GGYRCC 2 cut(s) 635, 700
BshTI ACCGGT 2 cut(s) 1132, 1238
BshVI ATCGAT 1 cut(s) 92
BsiEI CGRYCG 1 cut(s) 220
BsiHKAI GWGCWC 6 cut(s) 145, 1025, 1157, 1171, 1206, 1346
BsiHKCI CYCGRG 5 cut(s) 662, 800, 945, 1006, 1333
BsiSI CCGG 7 cut(s) 78, 252, 663, 801, 1007, 1133, 1239
BslFI GGGAC 1 cut(s) 491
BslI CCNNNNNNNGG 3 cut(s) 26, 680, 1358
BsmAI GTCTC 2 cut(s) 127, 859
BsmFI GGGAC 1 cut(s) 491
BsmI GAATGC 2 cut(s) 358, 428
BsnI GGCC 1 cut(s) 854
Bso31I GGTCTC 2 cut(s) 127, 859
BsoBI CYCGRG 5 cut(s) 662, 800, 945, 1006, 1333
Bsp1286I GDGCHC 7 cut(s) 145, 713, 1025, 1157, 1171, 1206, 1346
Bsp143I GATC 7 cut(s) 217, 362, 949, 1058, 1075, 1092, 1397
Bsp68I TCGCGA 1 cut(s) 216
BspACI CCGC 2 cut(s) 1215, 1299
BspANI GGCC 1 cut(s) 854
BspCNI CTCAG 5 cut(s) 121, 499, 544, 993, 1331
BspDI ATCGAT 1 cut(s) 92
BspFNI CGCG 1 cut(s) 216
BspLI GGNNCC 6 cut(s) 59, 364, 637, 702, 957, 1140
BspMAI CTGCAG 1 cut(s) 67
BspMI ACCTGC 2 cut(s) 347, 1268
BspPI GGATC 4 cut(s) 357, 370, 1066, 1392
BspT107I GGYRCC 2 cut(s) 635, 700
BspTNI GGTCTC 2 cut(s) 127, 859
BsrBI CCGCTC 1 cut(s) 1299
BsrDI GCAATG 1 cut(s) 455
BsrFI RCCGGY 2 cut(s) 1132, 1238
BsrI ACTGG 6 cut(s) 59, 175, 289, 310, 568, 1148
BssAI RCCGGY 2 cut(s) 1132, 1238
BssECI CCNNGG 7 cut(s) 225, 661, 662, 663, 800, 801, 1006
BssMI GATC 7 cut(s) 217, 362, 949, 1058, 1075, 1092, 1397
BssNI GRCGYC 2 cut(s) 326, 636
Bst2UI CCWGG 5 cut(s) 138, 618, 681, 726, 870
Bst4CI ACNGT 5 cut(s) 152, 188, 241, 505, 1020
Bst6I CTCTTC 2 cut(s) 615, 1353
BstACI GRCGYC 2 cut(s) 326, 636
BstAPI GCANNNNNTGC 2 cut(s) 1217, 1226
BstBAI YACGTR 1 cut(s) 1033
BstC8I GCNNGC 4 cut(s) 10, 492, 738, 1213
BstDEI CTNAG 5 cut(s) 129, 486, 531, 980, 1318
BstENI CCTNNNNNAGG 2 cut(s) 678, 1356
BstF5I GGATG 4 cut(s) 343, 481, 940, 1078
BstFNI CGCG 1 cut(s) 216
BstH2I RGCGCY 1 cut(s) 639
BstHHI GCGC 2 cut(s) 638, 733
BstKTI GATC 7 cut(s) 220, 365, 952, 1061, 1078, 1095, 1400
BstMAI GTCTC 2 cut(s) 127, 859
BstMBI GATC 7 cut(s) 217, 362, 949, 1058, 1075, 1092, 1397
BstMCI CGRYCG 1 cut(s) 220
BstMWI GCNNNNNNNGC 7 cut(s) 737, 746, 981, 1136, 1175, 1217, 1226
BstNI CCWGG 5 cut(s) 138, 618, 681, 726, 870
BstNSI RCATGY 2 cut(s) 166, 1068
BstSFI CTRYAG 2 cut(s) 63, 828
BstSLI GKGCMC 1 cut(s) 1025
BstSNI TACGTA 1 cut(s) 1033
BstUI CGCG 1 cut(s) 216
BstV1I GCAGC 4 cut(s) 745, 1165, 1187, 1311
BstV2I GAAGAC 1 cut(s) 986
BstX2I RGATCY 1 cut(s) 362
BstXI CCANNNNNNTGG 1 cut(s) 1301
BstYI RGATCY 1 cut(s) 362
Bsu15I ATCGAT 1 cut(s) 92
BsuI GTATCC 2 cut(s) 270, 389
BsuRI GGCC 1 cut(s) 854
BsuTUI ATCGAT 1 cut(s) 92
BtsCI GGATG 4 cut(s) 343, 481, 940, 1078
BtsIMutI CAGTG 1 cut(s) 1155
BtuMI TCGCGA 1 cut(s) 216
BveI ACCTGC 2 cut(s) 347, 1268
Cac8I GCNNGC 4 cut(s) 10, 492, 738, 1213
CaiI CAGNNNCTG 1 cut(s) 524
CfoI GCGC 2 cut(s) 638, 733
Cfr10I RCCGGY 2 cut(s) 1132, 1238
Cfr13I GGNCC 3 cut(s) 57, 578, 644
Cfr9I CCCGGG 3 cut(s) 662, 800, 1006
ClaI ATCGAT 1 cut(s) 92
CseI GACGC 3 cut(s) 315, 964, 1101
CsiI ACCWGGT 2 cut(s) 136, 868
Csp6I GTAC 4 cut(s) 124, 404, 498, 1034
CspAI ACCGGT 2 cut(s) 1132, 1238
CviAII CATG 6 cut(s) 163, 285, 330, 367, 1065, 1234
CviQI GTAC 4 cut(s) 124, 404, 498, 1034
DdeI CTNAG 5 cut(s) 129, 486, 531, 980, 1318
DinI GGCGCC 1 cut(s) 637
DpnI GATC 7 cut(s) 219, 364, 951, 1060, 1077, 1094, 1399
DpnII GATC 7 cut(s) 217, 362, 949, 1058, 1075, 1092, 1397
Eam1104I CTCTTC 2 cut(s) 615, 1353
EarI CTCTTC 2 cut(s) 615, 1353
Ecl136II GAGCTC 3 cut(s) 1155, 1204, 1344
Eco105I TACGTA 1 cut(s) 1033
Eco147I AGGCCT 1 cut(s) 854
Eco24I GRGCYC 4 cut(s) 713, 1157, 1206, 1346
Eco31I GGTCTC 2 cut(s) 127, 859
Eco47I GGWCC 3 cut(s) 57, 578, 644
Eco53kI GAGCTC 3 cut(s) 1155, 1204, 1344
Eco88I CYCGRG 5 cut(s) 662, 800, 945, 1006, 1333
EcoICRI GAGCTC 3 cut(s) 1155, 1204, 1344
EcoNI CCTNNNNNAGG 2 cut(s) 678, 1356
EcoRII CCWGG 5 cut(s) 136, 616, 679, 724, 868
EcoT38I GRGCYC 4 cut(s) 713, 1157, 1206, 1346
EgeI GGCGCC 1 cut(s) 637
EheI GGCGCC 1 cut(s) 637
FaeI CATG 6 cut(s) 166, 288, 333, 370, 1068, 1237
FaqI GGGAC 1 cut(s) 491
FatI CATG 6 cut(s) 162, 284, 329, 366, 1064, 1233
FbaI TGATCA 1 cut(s) 1075
Fnu4HI GCNGC 4 cut(s) 734, 1176, 1179, 1325
FokI GGATG 4 cut(s) 330, 468, 927, 1065
FriOI GRGCYC 4 cut(s) 713, 1157, 1206, 1346
Fsp4HI GCNGC 4 cut(s) 734, 1176, 1179, 1325
FspBI CTAG 2 cut(s) 588, 1121
FspI TGCGCA 1 cut(s) 732
GlaI GCGC 2 cut(s) 637, 732
GluI GCNGC 4 cut(s) 734, 1176, 1179, 1325
GsuI CTGGAG 1 cut(s) 706
HaeII RGCGCY 1 cut(s) 639
HaeIII GGCC 1 cut(s) 854
HapII CCGG 7 cut(s) 78, 252, 663, 801, 1007, 1133, 1239
HgaI GACGC 3 cut(s) 315, 964, 1101
HhaI GCGC 2 cut(s) 638, 733
Hin1I GRCGYC 2 cut(s) 326, 636
Hin1II CATG 6 cut(s) 166, 288, 333, 370, 1068, 1237
Hin6I GCGC 2 cut(s) 636, 731
HinP1I GCGC 2 cut(s) 636, 731
HinfI GANTC 5 cut(s) 81, 89, 119, 688, 1368
HpaII CCGG 7 cut(s) 78, 252, 663, 801, 1007, 1133, 1239
HphI GGTGA 4 cut(s) 200, 287, 425, 884
Hpy166II GTNNAC 3 cut(s) 278, 875, 1023
Hpy188I TCNGA 2 cut(s) 1097, 1321
Hpy188III TCNNGA 8 cut(s) 50, 146, 215, 263, 860, 947, 1254, 1333
Hpy8I GTNNAC 3 cut(s) 278, 875, 1023
Hpy99I CGWCG 1 cut(s) 1398
HpyAV CCTTC 3 cut(s) 801, 1116, 1194
HpyCH4III ACNGT 5 cut(s) 152, 188, 241, 505, 1020
HpyCH4IV ACGT 3 cut(s) 268, 375, 1032
HpyF10VI GCNNNNNNNGC 7 cut(s) 737, 746, 981, 1136, 1175, 1217, 1226
HpyF3I CTNAG 5 cut(s) 129, 486, 531, 980, 1318
HpySE526I ACGT 3 cut(s) 268, 375, 1032
Hsp92I GRCGYC 2 cut(s) 326, 636
Hsp92II CATG 6 cut(s) 166, 288, 333, 370, 1068, 1237
HspAI GCGC 2 cut(s) 636, 731
KasI GGCGCC 1 cut(s) 635
Ksp22I TGATCA 1 cut(s) 1075
Kzo9I GATC 7 cut(s) 217, 362, 949, 1058, 1075, 1092, 1397
LmnI GCTCC 4 cut(s) 52, 148, 431, 1144
Lsp1109I GCAGC 4 cut(s) 745, 1165, 1187, 1311
LweI GCATC 4 cut(s) 58, 530, 1117, 1216
MabI ACCWGGT 2 cut(s) 136, 868
MaeI CTAG 2 cut(s) 588, 1121
MaeII ACGT 3 cut(s) 268, 375, 1032
MaeIII GTNAC 3 cut(s) 200, 552, 766
MalI GATC 7 cut(s) 219, 364, 951, 1060, 1077, 1094, 1399
MbiI CCGCTC 1 cut(s) 1299
MboI GATC 7 cut(s) 217, 362, 949, 1058, 1075, 1092, 1397
MboII GAAGA 7 cut(s) 576, 602, 605, 986, 1179, 1182, 1340
MflI RGATCY 1 cut(s) 362
MhlI GDGCHC 7 cut(s) 145, 713, 1025, 1157, 1171, 1206, 1346
MluCI AATT 7 cut(s) 317, 335, 455, 473, 970, 1308, 1389
Mly113I GGCGCC 1 cut(s) 636
MlyI GAGTC 3 cut(s) 75, 113, 697
MseI TTAA 1 cut(s) 656
MspA1I CMGCKG 1 cut(s) 1178
MspI CCGG 7 cut(s) 78, 252, 663, 801, 1007, 1133, 1239
Mva1269I GAATGC 2 cut(s) 358, 428
MvaI CCWGG 5 cut(s) 138, 618, 681, 726, 870
MvnI CGCG 1 cut(s) 216
MwoI GCNNNNNNNGC 7 cut(s) 737, 746, 981, 1136, 1175, 1217, 1226
NarI GGCGCC 1 cut(s) 636
NciI CCSGG 7 cut(s) 253, 663, 664, 801, 802, 1007, 1008
NdeII GATC 7 cut(s) 217, 362, 949, 1058, 1075, 1092, 1397
NlaIII CATG 6 cut(s) 166, 288, 333, 370, 1068, 1237
NlaIV GGNNCC 6 cut(s) 59, 364, 637, 702, 957, 1140
NmeAIII GCCGAG 2 cut(s) 677, 1253
NmuCI GTSAC 1 cut(s) 552
NruI TCGCGA 1 cut(s) 216
NsbI TGCGCA 1 cut(s) 732
NspI RCATGY 2 cut(s) 166, 1068
PaeR7I CTCGAG 2 cut(s) 945, 1333
PaqCI CACCTGC 1 cut(s) 347
PceI AGGCCT 1 cut(s) 854
PciI ACATGT 1 cut(s) 1064
PctI GAATGC 2 cut(s) 358, 428
PfeI GAWTC 2 cut(s) 89, 1368
PinAI ACCGGT 2 cut(s) 1132, 1238
PkrI GCNGC 4 cut(s) 735, 1177, 1180, 1326
Ple19I CGATCG 1 cut(s) 220
PleI GAGTC 3 cut(s) 75, 113, 696
PluTI GGCGCC 1 cut(s) 639
PpsI GAGTC 3 cut(s) 75, 113, 696
Ppu21I YACGTR 1 cut(s) 1033
PscI ACATGT 1 cut(s) 1064
Psp124BI GAGCTC 3 cut(s) 1157, 1206, 1346
Psp1406I AACGTT 1 cut(s) 268
Psp6I CCWGG 5 cut(s) 136, 616, 679, 724, 868
PspGI CCWGG 5 cut(s) 136, 616, 679, 724, 868
PspN4I GGNNCC 6 cut(s) 59, 364, 637, 702, 957, 1140
PspPI GGNCC 3 cut(s) 57, 578, 644
PstI CTGCAG 1 cut(s) 67
PstNI CAGNNNCTG 1 cut(s) 524
PsuI RGATCY 1 cut(s) 362
PvuI CGATCG 1 cut(s) 220
PvuII CAGCTG 1 cut(s) 1178
RruI TCGCGA 1 cut(s) 216
RsaI GTAC 4 cut(s) 125, 405, 499, 1035
RsaNI GTAC 4 cut(s) 124, 404, 498, 1034
SacI GAGCTC 3 cut(s) 1157, 1206, 1346
SaqAI TTAA 1 cut(s) 656
SatI GCNGC 4 cut(s) 734, 1176, 1179, 1325
Sau3AI GATC 7 cut(s) 217, 362, 949, 1058, 1075, 1092, 1397
Sau96I GGNCC 3 cut(s) 57, 578, 644
SchI GAGTC 3 cut(s) 75, 113, 697
SduI GDGCHC 7 cut(s) 145, 713, 1025, 1157, 1171, 1206, 1346
SexAI ACCWGGT 2 cut(s) 136, 868
SfaNI GCATC 4 cut(s) 58, 530, 1117, 1216
SfcI CTRYAG 2 cut(s) 63, 828
SfoI GGCGCC 1 cut(s) 637
Sfr274I CTCGAG 2 cut(s) 945, 1333
SgrAI CRCCGGYG 1 cut(s) 1132
SinI GGWCC 3 cut(s) 57, 578, 644
SlaI CTCGAG 2 cut(s) 945, 1333
SmaI CCCGGG 3 cut(s) 664, 802, 1008
SmlI CTYRAG 4 cut(s) 42, 592, 945, 1333
SmoI CTYRAG 4 cut(s) 42, 592, 945, 1333
SnaBI TACGTA 1 cut(s) 1033
Sse9I AATT 7 cut(s) 317, 335, 455, 473, 970, 1308, 1389
SseBI AGGCCT 1 cut(s) 854
SsiI CCGC 2 cut(s) 1215, 1299
SspDI GGCGCC 1 cut(s) 635
SspMI CTAG 2 cut(s) 588, 1121
SstI GAGCTC 3 cut(s) 1157, 1206, 1346
StuI AGGCCT 1 cut(s) 854
TaaI ACNGT 5 cut(s) 152, 188, 241, 505, 1020
TaiI ACGT 3 cut(s) 271, 378, 1035
TaqI TCGA 5 cut(s) 92, 946, 1196, 1334, 1396
TasI AATT 7 cut(s) 317, 335, 455, 473, 970, 1308, 1389
TfiI GAWTC 2 cut(s) 89, 1368
Tru1I TTAA 1 cut(s) 656
Tru9I TTAA 1 cut(s) 656
TscAI CASTG 1 cut(s) 1155
TseFI GTSAC 1 cut(s) 552
TseI GCWGC 4 cut(s) 733, 1175, 1178, 1324
Tsp45I GTSAC 1 cut(s) 552
TspDTI ATGAA 3 cut(s) 467, 926, 1182
TspMI CCCGGG 3 cut(s) 662, 800, 1006
TspRI CASTG 1 cut(s) 1155
VneI GTGCAC 1 cut(s) 1021
VpaK11BI GGWCC 3 cut(s) 57, 578, 644
XagI CCTNNNNNAGG 2 cut(s) 678, 1356
XapI RAATTY 5 cut(s) 317, 335, 455, 473, 1389
XceI RCATGY 2 cut(s) 166, 1068
XhoI CTCGAG 2 cut(s) 945, 1333
XmaI CCCGGG 3 cut(s) 662, 800, 1006
XspI CTAG 2 cut(s) 588, 1121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.