MD03G1280300.v1.1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0009284
Physical Location & Seq
Reverse (-)
36157488 .. 36161994
4507 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1280300.v1.1.491

Sequence Viewer

Length: 1740 bp
ATGAGGAGAGAGAAAGAAAGAGTGTTTCAAACTTTCAGTGAGTGTGAAGCCAAAAGGCCGATACCAGACAGTACGAATACGTTCGCTTTAAGAGAGAGAGCAATTAAGCTTCTCCATCACTGTGAAGCAACCGTCTCCGTTCCTCTCTCTCTCTCTCCACTTTCTCTCACACTCTCTTCCGCTCGATCGAGCTTCTCCGATCCTTCAAAGGCCTCTCTAGAAGGGTGGTGGGAATCCTGTACAGCTCTCCCTTTCCCCCTTACTCTGCTCCTCATAGTTGCTGAAGGTGTACAGGAAACCCAACACGCCGCCGTTTTTGTGATGGAGTTGTACGGACGAAGCCCCGCCGGAAACGGGTCGAACCAGGAATGGAGCCCCGCAGCCGGAGAGACCGGCCTCGAAGAGCAAATGTGGCAATTGGGGCTGACGGGCGGCGAATCGTACCCGGAGAGACCCGGCGTGCCCAACTGTGTCTACTACATGCGAACCGGGTTCTGTGGATACGGTGGTCGGTGCCGGTACAACCATCCTCGCGATCGTGCTGCGGTCGTGGCAGCTGTAAGAGCTACAGGGGATTACCCAGATAGAGTGGGGGAACCCGTATGTCAGTATTATTTAAAGACTGGGACCTGTAAATTTGGTGCGTCCTGCAAGTTCCACCATCCAAAACATGGAGCTGGATCCTTAAACCGAGCTCCCCTAAATATTTATGGATACCCATTACGACCGGGCGAGAATGAATGCTCCTACTATTTGAAAACGGGGCAATGCAAATTTGGCATAACCTGTAAATTCCATCATCCACAGCCTGCTGGAACAACAATACCGGCTTCTGCACCCCAATTTTATCCATCGGTGCAGTCTCCTGTTCCTTTGGCAGAACAGTATGGGGGGGCATCCACCAGTTTGAGGGTGGCTAGGCCTCCACTGTTAACTGGATCATATGTGCAAGGGACTTACGGTCCTGTCTTGATTCCTTCTCCTGGAGTTGTTCCGATTCAGGGTTGGAGTCCGTATTCGGCACCTCTTAGCCCTGTACCATCTCCTGGAGCTCAACCCACAGTTGGAGCAACTTCTTTATATGGAGTAACACAGCTACCTTCTCCAACACACGGACTTGCAAGCCCTTATACCTCCATACCCTCTTCTGTTGGTCCTTCTAGCAGCAACCCGATTGAACAAGTTTTCCCAGAGAGGCCTGGCGAACTTGAATGCCAGTACTATCTGAAAACTGGGGACTGTAAATATGGACCATCTTGTAGGTATCATCATCCTCGGGATCGAACTGTACCGAGAATAACTTGTCTCCTTAGTCCGATGGGTCTCCCACTCCGTCCGGGAGTGCAACCGTGTACATTCTACCTGCAAAATGGTCAGTGCAAGTTTGGATCTACATGCAAATTTGACCATCCAGTGCAGACCATGAGGTACGACCTCTCAGCTTCATCTCTCGTTGATATGCCTGTTGTTCAATATCCGGTTGGGTCTCTGCTGGCCACCCTGGCTCCATCATCCTCATCATCGGATCTCCGGCCCGAATTCCTTTCAGCTTCCAAAAGGGATACTTACTCAACCAGGGTGCCTTCTTCCGGGAACACCTCAAGTAGTTCAGGTGGATTGATTTTTTCACAGAGCGGTTCTGTTTCACTATCTGATGTGCAACTGTCCAGTCAGACTTCATCCCCTTTGAGCAATAGCAGAAGCACGAGACCAGGTGGCGCGTTTCGTCGATCGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

580

Amino Acids

62.41

Weight (kDa)

8.8

Isoelectric Point (pI)

58.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 153 - 178 5.7e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 199 - 223 2.1e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 244 - 269 2.6e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 402 - 426 6e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 447 - 471 2.3e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1371
AccB1I GGYRCC 3 cut(s) 513, 1021, 1579
AccB7I CCANNNNNTGG 2 cut(s) 671, 1046
AccBSI CCGCTC 2 cut(s) 182, 1635
AccI GTMKAC 1 cut(s) 474
AccII CGCG 2 cut(s) 534, 1721
AciI CCGC 7 cut(s) 180, 309, 345, 378, 432, 545, 1635
AclWI GGATC 7 cut(s) 194, 675, 688, 946, 1287, 1396, 1533
AcoI YGGCCR 1 cut(s) 1494
AcsI RAATTY 5 cut(s) 635, 773, 791, 1400, 1538
AcuI CTGAAG 1 cut(s) 303
AgsI TTSAA 6 cut(s) 29, 207, 757, 1178, 1211, 1472
AhdI GACNNNNNGTC 1 cut(s) 960
AjnI CCWGG 7 cut(s) 363, 982, 1045, 1198, 1500, 1574, 1711
AloI GAACNNNNNNTCC 2 cut(s) 1170, 1202
Alw21I GWGCWC 2 cut(s) 697, 1054
Alw26I GTCTC 8 cut(s) 139, 383, 445, 867, 1310, 1328, 1491, 1702
AlwI GGATC 7 cut(s) 194, 675, 688, 946, 1287, 1396, 1533
Ama87I CYCGRG 1 cut(s) 1275
AoxI GGCC 7 cut(s) 56, 210, 394, 920, 1196, 1494, 1532
ApeKI GCWGC 4 cut(s) 380, 542, 554, 1164
ApoI RAATTY 5 cut(s) 635, 773, 791, 1400, 1538
Asp700I GAANNNNTTC 1 cut(s) 80
AspLEI GCGC 1 cut(s) 1721
AspS9I GGNCC 5 cut(s) 627, 962, 1154, 1250, 1533
AsuC2I CCSGG 6 cut(s) 446, 456, 490, 729, 1338, 1591
AvaI CYCGRG 1 cut(s) 1275
AvaII GGWCC 4 cut(s) 627, 962, 1154, 1250
BaeGI GKGCMC 1 cut(s) 465
BaeI ACNNNNGTAYC 2 cut(s) 493, 526
BalI TGGCCA 1 cut(s) 1496
BamHI GGATCC 1 cut(s) 680
BanI GGYRCC 3 cut(s) 513, 1021, 1579
BanII GRGCYC 3 cut(s) 377, 697, 1054
BauI CACGAG 1 cut(s) 1705
Bbv12I GWGCWC 2 cut(s) 697, 1054
BbvI GCAGC 4 cut(s) 392, 529, 566, 1176
BceAI ACGGC 1 cut(s) 296
BcgI CGANNNNNNTGC 2 cut(s) 524, 558
BciT130I CCWGG 7 cut(s) 365, 984, 1047, 1200, 1502, 1576, 1713
BciVI GTATCC 3 cut(s) 494, 707, 1555
BcnI CCSGG 6 cut(s) 446, 456, 490, 729, 1338, 1591
BcoDI GTCTC 8 cut(s) 139, 383, 445, 867, 1310, 1328, 1491, 1702
BfaI CTAG 3 cut(s) 218, 918, 1161
BfmI CTRYAG 1 cut(s) 567
BfuAI ACCTGC 1 cut(s) 1371
BfuI GTATCC 3 cut(s) 494, 707, 1555
BglI GCCNNNNNGGC 1 cut(s) 1502
BisI GCNGC 6 cut(s) 309, 381, 433, 543, 555, 1165
BlsI GCNGC 6 cut(s) 310, 382, 434, 544, 556, 1166
BmcAI AGTACT 1 cut(s) 1220
Bme18I GGWCC 4 cut(s) 627, 962, 1154, 1250
BmeRI GACNNNNNGTC 1 cut(s) 960
BmeT110I CYCGRG 1 cut(s) 1275
BmgT120I GGNCC 5 cut(s) 627, 962, 1154, 1250, 1533
BmiI GGNNCC 8 cut(s) 374, 515, 597, 628, 682, 1023, 1506, 1581
BmrI ACTGGG 2 cut(s) 633, 1242
BmsI GCATC 1 cut(s) 905
BmuI ACTGGG 2 cut(s) 633, 1242
BpmI CTGGAG 2 cut(s) 1005, 1068
BpuEI CTTGAG 1 cut(s) 1585
BpuMI CCSGG 6 cut(s) 446, 456, 490, 729, 1338, 1591
Bsa29I ATCGAT 1 cut(s) 1733
BsaI GGTCTC 5 cut(s) 383, 445, 1328, 1491, 1702
BsaJI CCNNGG 3 cut(s) 1274, 1500, 1575
BsaWI WCCGGW 1 cut(s) 1477
BsaXI ACNNNNNCTCC 2 cut(s) 1489, 1519
Bse118I RCCGGY 3 cut(s) 392, 516, 826
Bse1I ACTGG 7 cut(s) 628, 903, 940, 1216, 1237, 1412, 1668
Bse3DI GCAATG 1 cut(s) 773
BseBI CCWGG 7 cut(s) 365, 984, 1047, 1200, 1502, 1576, 1713
BseCI ATCGAT 1 cut(s) 1733
BseDI CCNNGG 3 cut(s) 1274, 1500, 1575
BseGI GGATG 8 cut(s) 526, 661, 799, 896, 1270, 1408, 1511, 1679
BseMI GCAATG 1 cut(s) 773
BseMII CTCAG 1 cut(s) 1452
BseNI ACTGG 7 cut(s) 628, 903, 940, 1216, 1237, 1412, 1668
BseRI GAGGAG 2 cut(s) 19, 260
BseSI GKGCMC 1 cut(s) 465
BseXI GCAGC 4 cut(s) 392, 529, 566, 1176
BsgI GTGCAG 3 cut(s) 819, 878, 1436
Bsh1236I CGCG 2 cut(s) 534, 1721
Bsh1285I CGRYCG 5 cut(s) 188, 538, 549, 728, 1733
BshFI GGCC 7 cut(s) 58, 212, 396, 922, 1198, 1496, 1534
BshNI GGYRCC 3 cut(s) 513, 1021, 1579
BshVI ATCGAT 1 cut(s) 1733
BsiEI CGRYCG 5 cut(s) 188, 538, 549, 728, 1733
BsiHKAI GWGCWC 2 cut(s) 697, 1054
BsiHKCI CYCGRG 1 cut(s) 1275
BslFI GGGAC 3 cut(s) 640, 967, 1250
BsmAI GTCTC 8 cut(s) 139, 383, 445, 867, 1310, 1328, 1491, 1702
BsmBI CGTCTC 1 cut(s) 139
BsmFI GGGAC 3 cut(s) 640, 967, 1250
BsmI GAATGC 2 cut(s) 746, 1217
BsnI GGCC 7 cut(s) 58, 212, 396, 922, 1198, 1496, 1534
Bso31I GGTCTC 5 cut(s) 383, 445, 1328, 1491, 1702
BsoBI CYCGRG 1 cut(s) 1275
Bsp1286I GDGCHC 4 cut(s) 377, 465, 697, 1054
Bsp1407I TGTACA 3 cut(s) 239, 289, 1352
Bsp143I GATC 9 cut(s) 185, 199, 535, 680, 938, 1279, 1388, 1525, 1730
Bsp68I TCGCGA 1 cut(s) 534
BspACI CCGC 7 cut(s) 180, 309, 345, 378, 432, 545, 1635
BspANI GGCC 7 cut(s) 58, 212, 396, 922, 1198, 1496, 1534
BspCNI CTCAG 1 cut(s) 1451
BspDI ATCGAT 1 cut(s) 1733
BspFNI CGCG 2 cut(s) 534, 1721
BspLI GGNNCC 8 cut(s) 374, 515, 597, 628, 682, 1023, 1506, 1581
BspMI ACCTGC 1 cut(s) 1371
BspPI GGATC 7 cut(s) 194, 675, 688, 946, 1287, 1396, 1533
BspQI GCTCTTC 1 cut(s) 396
BspT107I GGYRCC 3 cut(s) 513, 1021, 1579
BspTNI GGTCTC 5 cut(s) 383, 445, 1328, 1491, 1702
BsrBI CCGCTC 2 cut(s) 182, 1635
BsrDI GCAATG 1 cut(s) 773
BsrFI RCCGGY 3 cut(s) 392, 516, 826
BsrGI TGTACA 3 cut(s) 239, 289, 1352
BsrI ACTGG 7 cut(s) 628, 903, 940, 1216, 1237, 1412, 1668
BssAI RCCGGY 3 cut(s) 392, 516, 826
BssECI CCNNGG 3 cut(s) 1274, 1500, 1575
BssMI GATC 9 cut(s) 185, 199, 535, 680, 938, 1279, 1388, 1525, 1730
BssSI CACGAG 1 cut(s) 1705
Bst2BI CACGAG 1 cut(s) 1705
Bst2UI CCWGG 7 cut(s) 365, 984, 1047, 1200, 1502, 1576, 1713
Bst6I CTCTTC 3 cut(s) 181, 396, 1150
BstAUI TGTACA 3 cut(s) 239, 289, 1352
BstC8I GCNNGC 4 cut(s) 461, 810, 1123, 1494
BstDEI CTNAG 3 cut(s) 1028, 1310, 1438
BstF5I GGATG 8 cut(s) 526, 661, 799, 896, 1270, 1408, 1511, 1679
BstFNI CGCG 2 cut(s) 534, 1721
BstHHI GCGC 1 cut(s) 1721
BstKTI GATC 9 cut(s) 188, 202, 538, 683, 941, 1282, 1391, 1528, 1733
BstMAI GTCTC 8 cut(s) 139, 383, 445, 867, 1310, 1328, 1491, 1702
BstMBI GATC 9 cut(s) 185, 199, 535, 680, 938, 1279, 1388, 1525, 1730
BstMCI CGRYCG 5 cut(s) 188, 538, 549, 728, 1733
BstMWI GCNNNNNNNGC 6 cut(s) 412, 421, 551, 563, 777, 1502
BstNI CCWGG 7 cut(s) 365, 984, 1047, 1200, 1502, 1576, 1713
BstNSI RCATGY 2 cut(s) 484, 1398
BstSFI CTRYAG 1 cut(s) 567
BstSLI GKGCMC 1 cut(s) 465
BstUI CGCG 2 cut(s) 534, 1721
BstV1I GCAGC 4 cut(s) 392, 529, 566, 1176
BstX2I RGATCY 3 cut(s) 680, 1388, 1525
BstYI RGATCY 3 cut(s) 680, 1388, 1525
Bsu15I ATCGAT 1 cut(s) 1733
BsuI GTATCC 3 cut(s) 494, 707, 1555
BsuRI GGCC 7 cut(s) 58, 212, 396, 922, 1198, 1496, 1534
BsuTUI ATCGAT 1 cut(s) 1733
BtsCI GGATG 8 cut(s) 526, 661, 799, 896, 1270, 1408, 1511, 1679
BtsIMutI CAGTG 5 cut(s) 43, 118, 926, 1382, 1419
BtuMI TCGCGA 1 cut(s) 534
BveI ACCTGC 1 cut(s) 1371
Cac8I GCNNGC 4 cut(s) 461, 810, 1123, 1494
CfoI GCGC 1 cut(s) 1721
Cfr10I RCCGGY 3 cut(s) 392, 516, 826
Cfr13I GGNCC 5 cut(s) 627, 962, 1154, 1250, 1533
ClaI ATCGAT 1 cut(s) 1733
CseI GACGC 1 cut(s) 633
CsiI ACCWGGT 1 cut(s) 1711
CviAII CATG 4 cut(s) 481, 671, 1395, 1423
DdeI CTNAG 3 cut(s) 1028, 1310, 1438
DpnI GATC 9 cut(s) 187, 201, 537, 682, 940, 1281, 1390, 1527, 1732
DpnII GATC 9 cut(s) 185, 199, 535, 680, 938, 1279, 1388, 1525, 1730
DraI TTTAAA 1 cut(s) 618
DriI GACNNNNNGTC 1 cut(s) 960
EaeI YGGCCR 1 cut(s) 1494
Eam1104I CTCTTC 3 cut(s) 181, 396, 1150
Eam1105I GACNNNNNGTC 1 cut(s) 960
EarI CTCTTC 3 cut(s) 181, 396, 1150
Ecl136II GAGCTC 2 cut(s) 695, 1052
Eco147I AGGCCT 3 cut(s) 212, 922, 1198
Eco24I GRGCYC 3 cut(s) 377, 697, 1054
Eco31I GGTCTC 5 cut(s) 383, 445, 1328, 1491, 1702
Eco47I GGWCC 4 cut(s) 627, 962, 1154, 1250
Eco53kI GAGCTC 2 cut(s) 695, 1052
Eco57I CTGAAG 1 cut(s) 303
Eco88I CYCGRG 1 cut(s) 1275
EcoICRI GAGCTC 2 cut(s) 695, 1052
EcoO109I RGGNCCY 1 cut(s) 627
EcoRI GAATTC 1 cut(s) 1538
EcoRII CCWGG 7 cut(s) 363, 982, 1045, 1198, 1500, 1574, 1711
EcoT38I GRGCYC 3 cut(s) 377, 697, 1054
Esp3I CGTCTC 1 cut(s) 139
FaeI CATG 4 cut(s) 484, 674, 1398, 1426
FalI AAGNNNNNCTT 2 cut(s) 1549, 1581
FaqI GGGAC 3 cut(s) 640, 967, 1250
FatI CATG 4 cut(s) 480, 670, 1394, 1422
FauI CCCGC 2 cut(s) 352, 385
FauNDI CATATG 1 cut(s) 943
FblI GTMKAC 1 cut(s) 474
Fnu4HI GCNGC 6 cut(s) 309, 381, 433, 543, 555, 1165
FokI GGATG 8 cut(s) 513, 648, 786, 883, 1257, 1395, 1498, 1666
FriOI GRGCYC 3 cut(s) 377, 697, 1054
Fsp4HI GCNGC 6 cut(s) 309, 381, 433, 543, 555, 1165
FspBI CTAG 3 cut(s) 218, 918, 1161
GlaI GCGC 1 cut(s) 1720
GluI GCNGC 6 cut(s) 309, 381, 433, 543, 555, 1165
GsuI CTGGAG 2 cut(s) 1005, 1068
HaeIII GGCC 7 cut(s) 58, 212, 396, 922, 1198, 1496, 1534
HgaI GACGC 1 cut(s) 633
HhaI GCGC 1 cut(s) 1721
Hin1II CATG 4 cut(s) 484, 674, 1398, 1426
Hin6I GCGC 1 cut(s) 1719
HinP1I GCGC 1 cut(s) 1719
HincII GTYRAC 1 cut(s) 933
HindII GTYRAC 1 cut(s) 933
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 5 cut(s) 233, 437, 973, 997, 1009
HpaI GTTAAC 1 cut(s) 933
Hpy166II GTNNAC 4 cut(s) 290, 475, 933, 1353
Hpy188I TCNGA 7 cut(s) 199, 996, 1227, 1317, 1525, 1654, 1674
Hpy188III TCNNGA 4 cut(s) 218, 533, 970, 1277
Hpy8I GTNNAC 4 cut(s) 290, 475, 933, 1353
Hpy99I CGWCG 1 cut(s) 1731
HpyAV CCTTC 7 cut(s) 213, 215, 278, 987, 1110, 1167, 1593
HpyCH4IV ACGT 1 cut(s) 80
HpyF10VI GCNNNNNNNGC 6 cut(s) 412, 421, 551, 563, 777, 1502
HpyF3I CTNAG 3 cut(s) 1028, 1310, 1438
HpySE526I ACGT 1 cut(s) 80
Hsp92II CATG 4 cut(s) 484, 674, 1398, 1426
HspAI GCGC 1 cut(s) 1719
KspAI GTTAAC 1 cut(s) 933
Kzo9I GATC 9 cut(s) 185, 199, 535, 680, 938, 1279, 1388, 1525, 1730
LguI GCTCTTC 1 cut(s) 396
LmnI GCTCC 8 cut(s) 273, 372, 674, 700, 749, 1049, 1067, 1510
Lsp1109I GCAGC 4 cut(s) 392, 529, 566, 1176
LweI GCATC 1 cut(s) 905
MabI ACCWGGT 1 cut(s) 1711
MaeI CTAG 3 cut(s) 218, 918, 1161
MaeII ACGT 1 cut(s) 80
MaeIII GTNAC 1 cut(s) 1087
MalI GATC 9 cut(s) 187, 201, 537, 682, 940, 1281, 1390, 1527, 1732
MbiI CCGCTC 2 cut(s) 182, 1635
MboI GATC 9 cut(s) 185, 199, 535, 680, 938, 1279, 1388, 1525, 1730
MboII GAAGA 4 cut(s) 168, 413, 1137, 1578
MfeI CAATTG 1 cut(s) 416
MflI RGATCY 3 cut(s) 680, 1388, 1525
MhlI GDGCHC 4 cut(s) 377, 465, 697, 1054
MlsI TGGCCA 1 cut(s) 1496
MluCI AATT 8 cut(s) 102, 416, 635, 773, 791, 842, 1400, 1538
MluNI TGGCCA 1 cut(s) 1496
MlyI GAGTC 1 cut(s) 1018
MmeI TCCRAC 3 cut(s) 986, 1045, 1130
Mox20I TGGCCA 1 cut(s) 1496
MroXI GAANNNNTTC 1 cut(s) 80
MscI TGGCCA 1 cut(s) 1496
MseI TTAA 6 cut(s) 89, 105, 617, 686, 932, 1738
MslI CAYNNNNRTG 1 cut(s) 120
Msp20I TGGCCA 1 cut(s) 1496
MspA1I CMGCKG 1 cut(s) 557
MunI CAATTG 1 cut(s) 416
Mva1269I GAATGC 2 cut(s) 746, 1217
MvaI CCWGG 7 cut(s) 365, 984, 1047, 1200, 1502, 1576, 1713
MvnI CGCG 2 cut(s) 534, 1721
MwoI GCNNNNNNNGC 6 cut(s) 412, 421, 551, 563, 777, 1502
NciI CCSGG 6 cut(s) 446, 456, 490, 729, 1338, 1591
NdeI CATATG 1 cut(s) 943
NdeII GATC 9 cut(s) 185, 199, 535, 680, 938, 1279, 1388, 1525, 1730
NlaIII CATG 4 cut(s) 484, 674, 1398, 1426
NlaIV GGNNCC 8 cut(s) 374, 515, 597, 628, 682, 1023, 1506, 1581
NruI TCGCGA 1 cut(s) 534
NspI RCATGY 2 cut(s) 484, 1398
PceI AGGCCT 3 cut(s) 212, 922, 1198
PciSI GCTCTTC 1 cut(s) 396
PctI GAATGC 2 cut(s) 746, 1217
PdmI GAANNNNTTC 1 cut(s) 80
PfeI GAWTC 4 cut(s) 233, 437, 973, 997
PflMI CCANNNNNTGG 2 cut(s) 671, 1046
PfoI TCCNGGA 4 cut(s) 982, 1045, 1336, 1589
PkrI GCNGC 6 cut(s) 310, 382, 434, 544, 556, 1166
Ple19I CGATCG 3 cut(s) 188, 538, 1733
PleI GAGTC 1 cut(s) 1017
PpsI GAGTC 1 cut(s) 1017
PpuMI RGGWCCY 1 cut(s) 627
Psp124BI GAGCTC 2 cut(s) 697, 1054
Psp5II RGGWCCY 1 cut(s) 627
Psp6I CCWGG 7 cut(s) 363, 982, 1045, 1198, 1500, 1574, 1711
PspGI CCWGG 7 cut(s) 363, 982, 1045, 1198, 1500, 1574, 1711
PspN4I GGNNCC 8 cut(s) 374, 515, 597, 628, 682, 1023, 1506, 1581
PspPI GGNCC 5 cut(s) 627, 962, 1154, 1250, 1533
PspPPI RGGWCCY 1 cut(s) 627
PsuI RGATCY 3 cut(s) 680, 1388, 1525
PvuI CGATCG 3 cut(s) 188, 538, 1733
PvuII CAGCTG 1 cut(s) 557
RruI TCGCGA 1 cut(s) 534
RseI CAYNNNNRTG 1 cut(s) 120
SacI GAGCTC 2 cut(s) 697, 1054
SapI GCTCTTC 1 cut(s) 396
SaqAI TTAA 6 cut(s) 89, 105, 617, 686, 932, 1738
SatI GCNGC 6 cut(s) 309, 381, 433, 543, 555, 1165
Sau3AI GATC 9 cut(s) 185, 199, 535, 680, 938, 1279, 1388, 1525, 1730
Sau96I GGNCC 5 cut(s) 627, 962, 1154, 1250, 1533
ScaI AGTACT 1 cut(s) 1220
SchI GAGTC 1 cut(s) 1018
SduI GDGCHC 4 cut(s) 377, 465, 697, 1054
SexAI ACCWGGT 1 cut(s) 1711
SfaNI GCATC 1 cut(s) 905
SfcI CTRYAG 1 cut(s) 567
SinI GGWCC 4 cut(s) 627, 962, 1154, 1250
SmiMI CAYNNNNRTG 1 cut(s) 120
SmlI CTYRAG 1 cut(s) 1600
SmoI CTYRAG 1 cut(s) 1600
Sse9I AATT 8 cut(s) 102, 416, 635, 773, 791, 842, 1400, 1538
SseBI AGGCCT 3 cut(s) 212, 922, 1198
SsiI CCGC 7 cut(s) 180, 309, 345, 378, 432, 545, 1635
SspI AATATT 1 cut(s) 706
SspMI CTAG 3 cut(s) 218, 918, 1161
SstI GAGCTC 2 cut(s) 697, 1054
StuI AGGCCT 3 cut(s) 212, 922, 1198
TaiI ACGT 1 cut(s) 83
TaqI TCGA 7 cut(s) 184, 188, 359, 399, 1282, 1729, 1733
TasI AATT 8 cut(s) 102, 416, 635, 773, 791, 842, 1400, 1538
TatI WGTACW 4 cut(s) 239, 289, 1218, 1352
TauI GCSGC 2 cut(s) 311, 435
TfiI GAWTC 4 cut(s) 233, 437, 973, 997
Tru1I TTAA 6 cut(s) 89, 105, 617, 686, 932, 1738
Tru9I TTAA 6 cut(s) 89, 105, 617, 686, 932, 1738
TscAI CASTG 5 cut(s) 43, 125, 933, 1382, 1419
TseI GCWGC 4 cut(s) 380, 542, 554, 1164
TspDTI ATGAA 3 cut(s) 753, 1434, 1668
TspGWI ACGGA 5 cut(s) 127, 348, 1002, 1128, 1322
TspRI CASTG 5 cut(s) 43, 125, 933, 1382, 1419
Van91I CCANNNNNTGG 2 cut(s) 671, 1046
VpaK11BI GGWCC 4 cut(s) 627, 962, 1154, 1250
XapI RAATTY 5 cut(s) 635, 773, 791, 1400, 1538
XbaI TCTAGA 1 cut(s) 217
XceI RCATGY 2 cut(s) 484, 1398
XcmI CCANNNNNNNNNTGG 2 cut(s) 668, 910
XmiI GTMKAC 1 cut(s) 474
XmnI GAANNNNTTC 1 cut(s) 80
XspI CTAG 3 cut(s) 218, 918, 1161
ZrmI AGTACT 1 cut(s) 1220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.