FvH4_2g24990

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0009284
Physical Location & Seq
Reverse (-)
20303218 .. 20307633
4416 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g24990.t1

Sequence Viewer

Length: 1389 bp
ATGGAGCTGTACGGTCGGAGCCCCGCGAGAAACGGGTCCAACCCGGAATGGAGCTCCGGCGCCGCCGAGACCGGGCTCGAAGAGCAAATGTGGCAATTGGGCCTGACGAGCACCGAATCGTACCCGGAGCGGCCTGGTGTGCCCAACTGTGTTTACTACATGCGAACCGGGTTCTGTGGATATGGTGTCAGGTGTCGGTACAACCATCCTCGTGATCGTGCTGCGGTTGTGGCGGCTGTGAGAGCTACAGGGGACTACCCAGAAAGAGTGGGTGAACCTGTATGTCAGTATTATTTAAAGACTGGGACCTGTAAATTTGGTGCGTCCTGCAAGTTCCATCATCCGAAACATGGAGGTGGATCCTTGACACGTGCTCCACTAAATATTTATGGCTACCCGCTACGACCGGGTGAGAGTGAATGCTCCTACTATTTGAAAACGGGGCAATGCAAATTTGGTTTAACCTGTAAATTCCATCACCCACAACCTGCTGGAACTACAGTACCAGCCTCTGCACCTCAATTTTATCAGTCGGTGCAGTCTCCTTCTGTTCCTATGCCAGAACAATTTGGGGGCCAATCCACTGGTTTGAGAGTGGCCAGGCCTCCACTATTACCTGGTTCATATGTGCAAGGGGCTTACGGTCCTGTCTTGATTCCTCCAGGAGTTGTTCCTATTCCGAGCTGGAATCCTTATTCGGCGCCTTTAAGTCCTGCACTATCTCCTGGAGCTCAACCCACAGTAGGAGCAACCTCTTTGTATGGACTGACACAGTTATCTTCTCCCCCCCATGCGCTTGCAAGACCTTATACCTCTGTACCATCTTCTGTTGGCCCTTCTAGCAGCAGCCCAAATGAACAAACCTTCCCTGAGAGGCCTGGAGAACCTGAATGCCAGTATTACCTGAGAACTGGAGACTGTAAATTTGGACCGTCCTGTCGGTACCATCATCCTCGAGATCGAATTGCACCAAGGACAAATTGTCTCCTCAGTCCAGTTGGTCTACCTCTCCGTCCGGGTGTGCAACCTTGTACATTCTACTTGCAAAATGGGCATTGCAAGTTTGGGTCTTCCTGCAAGTTCGATCATCCAATGGGAACTATGAGATACAGCCCATCAGCTTCATCTCTCGATATGCCTGTTGCTCCATACCCGGTTGGATCTTTGCTGGGTACTCTGGCTTCTTCTTCCTCTTCAGAGCTTCGACCTGAATTAGTTTCAGCTAGAATGCCTTCTTCTGGGAACCCCTCAAGTAGTTCAGTCGGATTGATTTTTTCTCAGAGTGGATCTGTTTCACTAGCTGATGTGCAACTATCAAGTCAAACTTCCGTTCCTATAAGCAATGGCAGAGGCACAAGGCAAGGTGGCGAGGTTCGTCGTTCAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

463

Amino Acids

49.4

Weight (kDa)

9.05

Isoelectric Point (pI)

65.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 46 - 71 2.6e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 92 - 116 1.6e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 137 - 162 8.8e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 293 - 319 2e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 340 - 365 4.3e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 936
Acc36I ACCTGC 1 cut(s) 496
Acc65I GGTACC 1 cut(s) 942
AccB1I GGYRCC 3 cut(s) 59, 700, 942
AccBSI CCGCTC 1 cut(s) 130
AccI GTMKAC 1 cut(s) 1003
AccII CGCG 1 cut(s) 26
AciI CCGC 6 cut(s) 24, 63, 130, 224, 233, 398
AclWI GGATC 4 cut(s) 354, 367, 1168, 1294
AcoI YGGCCR 1 cut(s) 597
AcsI RAATTY 4 cut(s) 314, 452, 470, 923
AcuI CTGAAG 1 cut(s) 1179
AcvI CACGTG 1 cut(s) 371
AcyI GRCGYC 2 cut(s) 60, 701
AfaI GTAC 8 cut(s) 11, 122, 200, 504, 819, 944, 1033, 1174
AfiI CCNNNNNNNGG 4 cut(s) 72, 350, 743, 1238
AflIII ACRYGT 1 cut(s) 368
AgsI TTSAA 2 cut(s) 436, 1383
AhdI GACNNNNNGTC 1 cut(s) 981
AjnI CCWGG 6 cut(s) 133, 599, 616, 661, 724, 877
AloI GAACNNNNNNTCC 2 cut(s) 849, 881
AluBI AGCT 9 cut(s) 7, 54, 245, 684, 731, 1121, 1201, 1223, 1301
AluI AGCT 9 cut(s) 7, 54, 245, 684, 731, 1121, 1201, 1223, 1301
Alw21I GWGCWC 4 cut(s) 56, 113, 376, 733
Alw26I GTCTC 4 cut(s) 62, 546, 909, 989
AlwI GGATC 4 cut(s) 354, 367, 1168, 1294
AlwNI CAGNNNCTG 1 cut(s) 512
Ama87I CYCGRG 1 cut(s) 954
AoxI GGCC 7 cut(s) 100, 131, 574, 597, 602, 832, 875
ApeKI GCWGC 3 cut(s) 221, 843, 846
ApoI RAATTY 4 cut(s) 314, 452, 470, 923
ArsI GACNNNNNNTTYG 2 cut(s) 908, 940
Asp700I GAANNNNTTC 1 cut(s) 1231
Asp718I GGTACC 1 cut(s) 942
AspLEI GCGC 3 cut(s) 62, 703, 796
AspS9I GGNCC 7 cut(s) 36, 100, 306, 574, 644, 833, 929
AsuC2I CCSGG 7 cut(s) 44, 73, 125, 169, 408, 1017, 1154
AsuHPI GGTGA 3 cut(s) 284, 422, 470
AvaI CYCGRG 1 cut(s) 954
AvaII GGWCC 4 cut(s) 36, 306, 644, 929
BaeGI GKGCMC 1 cut(s) 144
BaeI ACNNNNGTAYC 4 cut(s) 486, 519, 801, 834
BalI TGGCCA 1 cut(s) 599
BamHI GGATCC 1 cut(s) 359
BanI GGYRCC 3 cut(s) 59, 700, 942
BanII GRGCYC 4 cut(s) 23, 56, 78, 733
BarI GAAGNNNNNNTAC 2 cut(s) 1165, 1197
BauI CACGAG 1 cut(s) 210
BbrPI CACGTG 1 cut(s) 371
BbsI GAAGAC 1 cut(s) 1062
Bbv12I GWGCWC 4 cut(s) 56, 113, 376, 733
BbvI GCAGC 3 cut(s) 208, 855, 858
BccI CCATC 6 cut(s) 213, 345, 483, 829, 954, 1123
BciT130I CCWGG 6 cut(s) 135, 601, 618, 663, 726, 879
BcnI CCSGG 7 cut(s) 44, 73, 125, 169, 408, 1017, 1154
BcoDI GTCTC 4 cut(s) 62, 546, 909, 989
BfaI CTAG 3 cut(s) 840, 1224, 1298
BfmI CTRYAG 2 cut(s) 246, 498
BfoI RGCGCY 2 cut(s) 63, 704
BfuAI ACCTGC 1 cut(s) 496
BisI GCNGC 6 cut(s) 63, 131, 222, 234, 844, 847
BlsI GCNGC 6 cut(s) 64, 132, 223, 235, 845, 848
Bme18I GGWCC 4 cut(s) 36, 306, 644, 929
BmeRI GACNNNNNGTC 1 cut(s) 981
BmeT110I CYCGRG 1 cut(s) 954
BmgT120I GGNCC 7 cut(s) 36, 100, 306, 574, 644, 833, 929
BmiI GGNNCC 9 cut(s) 20, 37, 61, 307, 361, 575, 702, 944, 1244
BmrI ACTGGG 1 cut(s) 312
BmuI ACTGGG 1 cut(s) 312
BpiI GAAGAC 1 cut(s) 1062
BpmI CTGGAG 4 cut(s) 645, 747, 900, 933
BpuEI CTTGAG 1 cut(s) 1234
BpuMI CCSGG 7 cut(s) 44, 73, 125, 169, 408, 1017, 1154
BsaAI YACGTR 1 cut(s) 371
BsaHI GRCGYC 2 cut(s) 60, 701
BsaI GGTCTC 1 cut(s) 62
BsaJI CCNNGG 1 cut(s) 971
BsaXI ACNNNNNCTCC 2 cut(s) 358, 388
Bsc4I CCNNNNNNNGG 4 cut(s) 72, 350, 743, 1238
Bse1I ACTGG 5 cut(s) 307, 589, 895, 916, 995
Bse3DI GCAATG 3 cut(s) 452, 1054, 1348
BseBI CCWGG 6 cut(s) 135, 601, 618, 663, 726, 879
BseDI CCNNGG 1 cut(s) 971
BseGI GGATG 4 cut(s) 205, 340, 949, 1087
BseLI CCNNNNNNNGG 4 cut(s) 72, 350, 743, 1238
BseMI GCAATG 3 cut(s) 452, 1054, 1348
BseMII CTCAG 4 cut(s) 861, 896, 1003, 1292
BseNI ACTGG 5 cut(s) 307, 589, 895, 916, 995
BseRI GAGGAG 1 cut(s) 977
BseSI GKGCMC 1 cut(s) 144
BseXI GCAGC 3 cut(s) 208, 855, 858
BseYI CCCAGC 1 cut(s) 1168
BsgI GTGCAG 3 cut(s) 498, 557, 699
Bsh1236I CGCG 1 cut(s) 26
Bsh1285I CGRYCG 2 cut(s) 16, 407
BshFI GGCC 7 cut(s) 102, 133, 576, 599, 604, 834, 877
BshNI GGYRCC 3 cut(s) 59, 700, 942
BsiEI CGRYCG 2 cut(s) 16, 407
BsiHKAI GWGCWC 4 cut(s) 56, 113, 376, 733
BsiHKCI CYCGRG 1 cut(s) 954
BsiSI CCGG 8 cut(s) 44, 57, 72, 125, 168, 407, 1016, 1154
BslFI GGGAC 2 cut(s) 266, 319
BslI CCNNNNNNNGG 4 cut(s) 72, 350, 743, 1238
BsmAI GTCTC 4 cut(s) 62, 546, 909, 989
BsmFI GGGAC 2 cut(s) 266, 319
BsmI GAATGC 3 cut(s) 425, 896, 1233
BsnI GGCC 7 cut(s) 102, 133, 576, 599, 604, 834, 877
Bso31I GGTCTC 1 cut(s) 62
BsoBI CYCGRG 1 cut(s) 954
Bsp1286I GDGCHC 7 cut(s) 23, 56, 78, 113, 144, 376, 733
Bsp1407I TGTACA 1 cut(s) 1031
Bsp143I GATC 6 cut(s) 214, 359, 958, 1084, 1160, 1286
BspACI CCGC 6 cut(s) 24, 63, 130, 224, 233, 398
BspANI GGCC 7 cut(s) 102, 133, 576, 599, 604, 834, 877
BspCNI CTCAG 4 cut(s) 862, 897, 1002, 1291
BspFNI CGCG 1 cut(s) 26
BspLI GGNNCC 9 cut(s) 20, 37, 61, 307, 361, 575, 702, 944, 1244
BspMI ACCTGC 1 cut(s) 496
BspPI GGATC 4 cut(s) 354, 367, 1168, 1294
BspQI GCTCTTC 1 cut(s) 75
BspT107I GGYRCC 3 cut(s) 59, 700, 942
BspTNI GGTCTC 1 cut(s) 62
BsrBI CCGCTC 1 cut(s) 130
BsrDI GCAATG 3 cut(s) 452, 1054, 1348
BsrGI TGTACA 1 cut(s) 1031
BsrI ACTGG 5 cut(s) 307, 589, 895, 916, 995
BssECI CCNNGG 1 cut(s) 971
BssMI GATC 6 cut(s) 214, 359, 958, 1084, 1160, 1286
BssNI GRCGYC 2 cut(s) 60, 701
BssSI CACGAG 1 cut(s) 210
BssT1I CCWWGG 1 cut(s) 971
Bst2BI CACGAG 1 cut(s) 210
Bst2UI CCWGG 6 cut(s) 135, 601, 618, 663, 726, 879
Bst4CI ACNGT 8 cut(s) 14, 149, 502, 644, 742, 774, 920, 933
Bst6I CTCTTC 2 cut(s) 75, 1198
BstACI GRCGYC 2 cut(s) 60, 701
BstAUI TGTACA 1 cut(s) 1031
BstBAI YACGTR 1 cut(s) 371
BstC8I GCNNGC 1 cut(s) 798
BstDEI CTNAG 4 cut(s) 870, 905, 989, 1278
BstF5I GGATG 4 cut(s) 205, 340, 949, 1087
BstFNI CGCG 1 cut(s) 26
BstH2I RGCGCY 2 cut(s) 63, 704
BstHHI GCGC 3 cut(s) 62, 703, 796
BstKTI GATC 6 cut(s) 217, 362, 961, 1087, 1163, 1289
BstMAI GTCTC 4 cut(s) 62, 546, 909, 989
BstMBI GATC 6 cut(s) 214, 359, 958, 1084, 1160, 1286
BstMCI CGRYCG 2 cut(s) 16, 407
BstMWI GCNNNNNNNGC 8 cut(s) 82, 91, 108, 139, 230, 242, 840, 1051
BstNI CCWGG 6 cut(s) 135, 601, 618, 663, 726, 879
BstNSI RCATGY 1 cut(s) 163
BstSFI CTRYAG 2 cut(s) 246, 498
BstSLI GKGCMC 1 cut(s) 144
BstUI CGCG 1 cut(s) 26
BstV1I GCAGC 3 cut(s) 208, 855, 858
BstV2I GAAGAC 1 cut(s) 1062
BstX2I RGATCY 3 cut(s) 359, 1160, 1286
BstXI CCANNNNNNTGG 1 cut(s) 584
BstYI RGATCY 3 cut(s) 359, 1160, 1286
BsuRI GGCC 7 cut(s) 102, 133, 576, 599, 604, 834, 877
BtsCI GGATG 4 cut(s) 205, 340, 949, 1087
BtsIMutI CAGTG 1 cut(s) 582
BveI ACCTGC 1 cut(s) 496
Cac8I GCNNGC 1 cut(s) 798
CaiI CAGNNNCTG 1 cut(s) 512
CfoI GCGC 3 cut(s) 62, 703, 796
Cfr13I GGNCC 7 cut(s) 36, 100, 306, 574, 644, 833, 929
CseI GACGC 1 cut(s) 312
CsiI ACCWGGT 1 cut(s) 616
Csp6I GTAC 8 cut(s) 10, 121, 199, 503, 818, 943, 1032, 1173
CviAII CATG 3 cut(s) 160, 350, 791
CviQI GTAC 8 cut(s) 10, 121, 199, 503, 818, 943, 1032, 1173
DdeI CTNAG 4 cut(s) 870, 905, 989, 1278
DinI GGCGCC 2 cut(s) 61, 702
DpnI GATC 6 cut(s) 216, 361, 960, 1086, 1162, 1288
DpnII GATC 6 cut(s) 214, 359, 958, 1084, 1160, 1286
DraI TTTAAA 1 cut(s) 297
DrdI GACNNNNNNGTC 1 cut(s) 936
DriI GACNNNNNGTC 1 cut(s) 981
DseDI GACNNNNNNGTC 1 cut(s) 936
EaeI YGGCCR 1 cut(s) 597
Eam1104I CTCTTC 2 cut(s) 75, 1198
Eam1105I GACNNNNNGTC 1 cut(s) 981
EarI CTCTTC 2 cut(s) 75, 1198
Ecl136II GAGCTC 2 cut(s) 54, 731
Eco130I CCWWGG 1 cut(s) 971
Eco147I AGGCCT 2 cut(s) 604, 877
Eco24I GRGCYC 4 cut(s) 23, 56, 78, 733
Eco31I GGTCTC 1 cut(s) 62
Eco47I GGWCC 4 cut(s) 36, 306, 644, 929
Eco53kI GAGCTC 2 cut(s) 54, 731
Eco57I CTGAAG 1 cut(s) 1179
Eco72I CACGTG 1 cut(s) 371
Eco88I CYCGRG 1 cut(s) 954
EcoICRI GAGCTC 2 cut(s) 54, 731
EcoO109I RGGNCCY 1 cut(s) 306
EcoRII CCWGG 6 cut(s) 133, 599, 616, 661, 724, 877
EcoT14I CCWWGG 1 cut(s) 971
EcoT38I GRGCYC 4 cut(s) 23, 56, 78, 733
EgeI GGCGCC 2 cut(s) 61, 702
EheI GGCGCC 2 cut(s) 61, 702
ErhI CCWWGG 1 cut(s) 971
FaeI CATG 3 cut(s) 163, 353, 794
FalI AAGNNNNNCTT 2 cut(s) 1309, 1341
FaqI GGGAC 2 cut(s) 266, 319
FatI CATG 3 cut(s) 159, 349, 790
FauI CCCGC 2 cut(s) 31, 405
FauNDI CATATG 1 cut(s) 625
FblI GTMKAC 1 cut(s) 1003
Fnu4HI GCNGC 6 cut(s) 63, 131, 222, 234, 844, 847
FokI GGATG 4 cut(s) 192, 327, 936, 1074
FriOI GRGCYC 4 cut(s) 23, 56, 78, 733
Fsp4HI GCNGC 6 cut(s) 63, 131, 222, 234, 844, 847
FspBI CTAG 3 cut(s) 840, 1224, 1298
GlaI GCGC 3 cut(s) 61, 702, 795
GluI GCNGC 6 cut(s) 63, 131, 222, 234, 844, 847
GsaI CCCAGC 1 cut(s) 1172
GsuI CTGGAG 4 cut(s) 645, 747, 900, 933
HaeII RGCGCY 2 cut(s) 63, 704
HaeIII GGCC 7 cut(s) 102, 133, 576, 599, 604, 834, 877
HapII CCGG 8 cut(s) 44, 57, 72, 125, 168, 407, 1016, 1154
HgaI GACGC 1 cut(s) 312
HhaI GCGC 3 cut(s) 62, 703, 796
Hin1I GRCGYC 2 cut(s) 60, 701
Hin1II CATG 3 cut(s) 163, 353, 794
Hin6I GCGC 3 cut(s) 60, 701, 794
HinP1I GCGC 3 cut(s) 60, 701, 794
HinfI GANTC 3 cut(s) 116, 655, 688
HpaII CCGG 8 cut(s) 44, 57, 72, 125, 168, 407, 1016, 1154
HphI GGTGA 3 cut(s) 284, 422, 470
Hpy166II GTNNAC 3 cut(s) 154, 275, 1004
Hpy188I TCNGA 6 cut(s) 18, 345, 681, 1198, 1265, 1281
Hpy188III TCNNGA 4 cut(s) 212, 652, 956, 1130
Hpy8I GTNNAC 3 cut(s) 154, 275, 1004
Hpy99I CGWCG 1 cut(s) 1380
HpyAV CCTTC 4 cut(s) 555, 846, 874, 1242
HpyCH4III ACNGT 8 cut(s) 14, 149, 502, 644, 742, 774, 920, 933
HpyCH4IV ACGT 1 cut(s) 370
HpyF10VI GCNNNNNNNGC 8 cut(s) 82, 91, 108, 139, 230, 242, 840, 1051
HpyF3I CTNAG 4 cut(s) 870, 905, 989, 1278
HpySE526I ACGT 1 cut(s) 370
Hsp92I GRCGYC 2 cut(s) 60, 701
Hsp92II CATG 3 cut(s) 163, 353, 794
HspAI GCGC 3 cut(s) 60, 701, 794
KasI GGCGCC 2 cut(s) 59, 700
KpnI GGTACC 1 cut(s) 946
Kzo9I GATC 6 cut(s) 214, 359, 958, 1084, 1160, 1286
LguI GCTCTTC 1 cut(s) 75
Lsp1109I GCAGC 3 cut(s) 208, 855, 858
MabI ACCWGGT 1 cut(s) 616
MaeI CTAG 3 cut(s) 840, 1224, 1298
MaeII ACGT 1 cut(s) 370
MalI GATC 6 cut(s) 216, 361, 960, 1086, 1162, 1288
MbiI CCGCTC 1 cut(s) 130
MboI GATC 6 cut(s) 214, 359, 958, 1084, 1160, 1286
MboII GAAGA 8 cut(s) 92, 771, 816, 1062, 1176, 1179, 1185, 1227
MfeI CAATTG 1 cut(s) 95
MflI RGATCY 3 cut(s) 359, 1160, 1286
MhlI GDGCHC 7 cut(s) 23, 56, 78, 113, 144, 376, 733
MlsI TGGCCA 1 cut(s) 599
MluNI TGGCCA 1 cut(s) 599
Mly113I GGCGCC 2 cut(s) 60, 701
MmeI TCCRAC 3 cut(s) 63, 1138, 1243
Mox20I TGGCCA 1 cut(s) 599
MroXI GAANNNNTTC 1 cut(s) 1231
MscI TGGCCA 1 cut(s) 599
MseI TTAA 3 cut(s) 296, 461, 707
MslI CAYNNNNRTG 2 cut(s) 210, 354
Msp20I TGGCCA 1 cut(s) 599
MspI CCGG 8 cut(s) 44, 57, 72, 125, 168, 407, 1016, 1154
MunI CAATTG 1 cut(s) 95
Mva1269I GAATGC 3 cut(s) 425, 896, 1233
MvaI CCWGG 6 cut(s) 135, 601, 618, 663, 726, 879
MvnI CGCG 1 cut(s) 26
MwoI GCNNNNNNNGC 8 cut(s) 82, 91, 108, 139, 230, 242, 840, 1051
NarI GGCGCC 2 cut(s) 60, 701
NciI CCSGG 7 cut(s) 44, 73, 125, 169, 408, 1017, 1154
NdeI CATATG 1 cut(s) 625
NdeII GATC 6 cut(s) 214, 359, 958, 1084, 1160, 1286
NlaIII CATG 3 cut(s) 163, 353, 794
NlaIV GGNNCC 9 cut(s) 20, 37, 61, 307, 361, 575, 702, 944, 1244
NmeAIII GCCGAG 1 cut(s) 91
NspI RCATGY 1 cut(s) 163
PaeR7I CTCGAG 1 cut(s) 954
PceI AGGCCT 2 cut(s) 604, 877
PciSI GCTCTTC 1 cut(s) 75
PctI GAATGC 3 cut(s) 425, 896, 1233
PdmI GAANNNNTTC 1 cut(s) 1231
PfeI GAWTC 3 cut(s) 116, 655, 688
PfoI TCCNGGA 2 cut(s) 661, 724
PkrI GCNGC 6 cut(s) 64, 132, 223, 235, 845, 848
PluTI GGCGCC 2 cut(s) 63, 704
PmaCI CACGTG 1 cut(s) 371
PmlI CACGTG 1 cut(s) 371
Ppu21I YACGTR 1 cut(s) 371
PpuMI RGGWCCY 1 cut(s) 306
Psp124BI GAGCTC 2 cut(s) 56, 733
Psp5II RGGWCCY 1 cut(s) 306
Psp6I CCWGG 6 cut(s) 133, 599, 616, 661, 724, 877
PspCI CACGTG 1 cut(s) 371
PspFI CCCAGC 1 cut(s) 1168
PspGI CCWGG 6 cut(s) 133, 599, 616, 661, 724, 877
PspN4I GGNNCC 9 cut(s) 20, 37, 61, 307, 361, 575, 702, 944, 1244
PspPI GGNCC 7 cut(s) 36, 100, 306, 574, 644, 833, 929
PspPPI RGGWCCY 1 cut(s) 306
PstNI CAGNNNCTG 1 cut(s) 512
PsuI RGATCY 3 cut(s) 359, 1160, 1286
RsaI GTAC 8 cut(s) 11, 122, 200, 504, 819, 944, 1033, 1174
RsaNI GTAC 8 cut(s) 10, 121, 199, 503, 818, 943, 1032, 1173
RseI CAYNNNNRTG 2 cut(s) 210, 354
SacI GAGCTC 2 cut(s) 56, 733
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 3 cut(s) 296, 461, 707
SatI GCNGC 6 cut(s) 63, 131, 222, 234, 844, 847
Sau3AI GATC 6 cut(s) 214, 359, 958, 1084, 1160, 1286
Sau96I GGNCC 7 cut(s) 36, 100, 306, 574, 644, 833, 929
SduI GDGCHC 7 cut(s) 23, 56, 78, 113, 144, 376, 733
SexAI ACCWGGT 1 cut(s) 616
SfcI CTRYAG 2 cut(s) 246, 498
SfoI GGCGCC 2 cut(s) 61, 702
Sfr274I CTCGAG 1 cut(s) 954
SinI GGWCC 4 cut(s) 36, 306, 644, 929
SlaI CTCGAG 1 cut(s) 954
SmiMI CAYNNNNRTG 2 cut(s) 210, 354
SmlI CTYRAG 2 cut(s) 954, 1249
SmoI CTYRAG 2 cut(s) 954, 1249
SseBI AGGCCT 2 cut(s) 604, 877
SsiI CCGC 6 cut(s) 24, 63, 130, 224, 233, 398
SspDI GGCGCC 2 cut(s) 59, 700
SspI AATATT 1 cut(s) 385
SspMI CTAG 3 cut(s) 840, 1224, 1298
SstI GAGCTC 2 cut(s) 56, 733
StuI AGGCCT 2 cut(s) 604, 877
StyI CCWWGG 1 cut(s) 971
TaaI ACNGT 8 cut(s) 14, 149, 502, 644, 742, 774, 920, 933
TaiI ACGT 1 cut(s) 373
TaqI TCGA 6 cut(s) 78, 955, 961, 1083, 1131, 1204
TatI WGTACW 1 cut(s) 1031
TauI GCSGC 3 cut(s) 65, 133, 236
TfiI GAWTC 3 cut(s) 116, 655, 688
Tru1I TTAA 3 cut(s) 296, 461, 707
Tru9I TTAA 3 cut(s) 296, 461, 707
TscAI CASTG 1 cut(s) 589
TseI GCWGC 3 cut(s) 221, 843, 846
TspDTI ATGAA 3 cut(s) 612, 870, 1113
TspGWI ACGGA 2 cut(s) 1001, 1318
TspRI CASTG 1 cut(s) 589
VpaK11BI GGWCC 4 cut(s) 36, 306, 644, 929
XapI RAATTY 4 cut(s) 314, 452, 470, 923
XceI RCATGY 1 cut(s) 163
XhoI CTCGAG 1 cut(s) 954
XmiI GTMKAC 1 cut(s) 1003
XmnI GAANNNNTTC 1 cut(s) 1231
XspI CTAG 3 cut(s) 840, 1224, 1298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.