Rroxscaffold_7G00174520

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0009284
Physical Location & Seq
Forward (+)
14163266 .. 14167226
3961 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00174520.1

Sequence Viewer

Length: 1395 bp
ATGGAGCAGCTGTACGGTCGGAGCCCCGCGAGAAACGGGTCCAACCCGGAATGGAGCTCCGCGGCGGGAGAGACCGGCCTCGAAGAGCAAATGTGGCAATTCGGCCTTACCAGCACCGAATCGTACCCGGAGCGGCCCGGTGTGCCCAACTGTGTCTACTACATGAGAACCGGCTTCTGTGGTTATGGCGTCAGGTGCCGCTACAACCATCCTCGTGATCGTGCTGCGGTTGTGGCAGCCGTGAGAGCTACAGGAGACTACCCAGAAAGAGTGGGCGAACCTGTATGTCAGTATTATTTAAAGACTGGGACCTGTAAATTTGGTGCGTCGTGCAAGTTCCATCATCCGAAACATGGAGGTGGATCCTTGACCCGTGCTCCACTAAATATTTATGGCTACCCGCTACGACCGGGTGAGAATGAATGCTCCTACTATTTGAAAACGGGGCAATGCAAGTTTGGTTTAACCTGTAAATTCCACCACCCGCAACCTGCTGGAACAACAGTACCAGCCTCTGCACCTCAATTTTATCCATCGGTGCAGTCTCCTTCTGTTCCCATGCCAGAACAATTTGGGGGGCAATCCACCGGTTTGAGGGTGGCCAGGCCTCAACTATTACCTGGTTCATATGTGCAAGGAGCTTATGGTCCTGTCTTGATTCCTCCAGGAGTTGTTCCTATTCCGAGCTGGAATCCTTATTCGGCACCTTTAAGTCCTGTACTATCTCCTGGAGCTCAACCCACAGTTGGAGCAACCTCTTTGTATGGACTGACACAGCTATCTTCTCCTACCCATGCCCTTGCAAGACCTTATACCTCTGTACTATCATCTGTTGGGCCTTCTAGCAGCAGCCCAAATGAACAAGCCTTCCCAGAGAGGCCTGGAGAACCTGAATGCCAGTATTACCTGAGAACTGGAGACTGTAAATTTGGACCCTCCTGTCGGTACCATCATCCTCGAGATCGGATTGCACCAAGGACAAATTGTCTCCTCAGTCCAGTTGGTCTCCCACTCCGTCCGGGCGTGCAACCTTGTACATTTTACTTGCAAAATGGGCATTGCAAGTTTGGATCTTCCTGCAAGTTCGATCATCCAATAGGGACCATGAGATATAGCCCATCAGCTTCATCTCTCGATATGCCTGTTGCTCCATTCCCAGTTGGATCTTTGCTGGGCACTCTGGCTCCTTCATCCTCATCTTCAGAGCTTCGACCTGAATTAATTTCAGCTAGAATGCCTTCTTCTGGGAACCCGTCAAGTAGTTCAGTCGGATTGATTTTTTCTCAAAGCGGATCTGTTTCACTAGCTGATGTGCAACTATCAAGTCAAACTTCTATTCCTATAAGCAATAGCAGAAGCACAAGGCAAGGTGGCGAGGTTCGTCGTTCGAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

464

Amino Acids

49.76

Weight (kDa)

9.06

Isoelectric Point (pI)

65.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 47 - 72 2.6e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 93 - 117 1.6e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 138 - 163 1.6e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 294 - 320 2e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 341 - 365 4e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 939
Acc36I ACCTGC 1 cut(s) 499
Acc65I GGTACC 1 cut(s) 945
AccB1I GGYRCC 3 cut(s) 195, 703, 945
AccBSI CCGCTC 1 cut(s) 133
AccI GTMKAC 1 cut(s) 156
AccII CGCG 2 cut(s) 29, 62
AclWI GGATC 5 cut(s) 357, 370, 1078, 1171, 1300
AcoI YGGCCR 1 cut(s) 600
AcsI RAATTY 3 cut(s) 317, 473, 926
AcuI CTGAAG 1 cut(s) 1185
AcyI GRCGYC 1 cut(s) 189
AfaI GTAC 7 cut(s) 14, 125, 507, 720, 822, 947, 1036
AfiI CCNNNNNNNGG 5 cut(s) 353, 594, 746, 942, 1244
AgeI ACCGGT 1 cut(s) 587
AgsI TTSAA 1 cut(s) 439
AhdI GACNNNNNGTC 1 cut(s) 984
AjnI CCWGG 5 cut(s) 602, 619, 664, 727, 880
AloI GAACNNNNNNTCC 2 cut(s) 852, 884
Alw21I GWGCWC 3 cut(s) 59, 379, 736
Alw26I GTCTC 6 cut(s) 65, 249, 549, 912, 992, 1010
AlwI GGATC 5 cut(s) 357, 370, 1078, 1171, 1300
AlwNI CAGNNNCTG 1 cut(s) 515
Ama87I CYCGRG 1 cut(s) 957
AoxI GGCC 7 cut(s) 76, 103, 134, 600, 605, 836, 878
ApeKI GCWGC 5 cut(s) 7, 224, 236, 846, 849
ApoI RAATTY 3 cut(s) 317, 473, 926
ArsI GACNNNNNNTTYG 2 cut(s) 911, 943
AseI ATTAAT 1 cut(s) 1220
AsiGI ACCGGT 1 cut(s) 587
Asp700I GAANNNNTTC 1 cut(s) 1237
Asp718I GGTACC 1 cut(s) 945
AspS9I GGNCC 7 cut(s) 39, 135, 309, 647, 836, 932, 1101
AsuC2I CCSGG 5 cut(s) 47, 128, 138, 411, 1020
AsuHPI GGTGA 1 cut(s) 425
AvaI CYCGRG 1 cut(s) 957
AvaII GGWCC 5 cut(s) 39, 309, 647, 932, 1101
BaeGI GKGCMC 2 cut(s) 147, 1178
BaeI ACNNNNGTAYC 2 cut(s) 489, 522
BalI TGGCCA 1 cut(s) 602
BamHI GGATCC 1 cut(s) 362
BanI GGYRCC 3 cut(s) 195, 703, 945
BanII GRGCYC 3 cut(s) 26, 59, 736
BauI CACGAG 1 cut(s) 213
Bbv12I GWGCWC 3 cut(s) 59, 379, 736
BbvI GCAGC 5 cut(s) 19, 211, 248, 858, 861
BccI CCATC 5 cut(s) 216, 348, 541, 957, 1126
BceAI ACGGC 1 cut(s) 224
BciT130I CCWGG 5 cut(s) 604, 621, 666, 729, 882
BcnI CCSGG 5 cut(s) 47, 128, 138, 411, 1020
BcoDI GTCTC 6 cut(s) 65, 249, 549, 912, 992, 1010
BfaI CTAG 3 cut(s) 843, 1230, 1304
BfmI CTRYAG 1 cut(s) 249
BfuAI ACCTGC 1 cut(s) 499
BisI GCNGC 8 cut(s) 8, 63, 134, 199, 225, 237, 847, 850
BlsI GCNGC 8 cut(s) 9, 64, 135, 200, 226, 238, 848, 851
Bme18I GGWCC 5 cut(s) 39, 309, 647, 932, 1101
BmeRI GACNNNNNGTC 1 cut(s) 984
BmeT110I CYCGRG 1 cut(s) 957
BmgT120I GGNCC 7 cut(s) 39, 135, 309, 647, 836, 932, 1101
BmrI ACTGGG 2 cut(s) 315, 1151
BmuI ACTGGG 2 cut(s) 315, 1151
BpmI CTGGAG 4 cut(s) 648, 750, 903, 936
BpuMI CCSGG 5 cut(s) 47, 128, 138, 411, 1020
BsaHI GRCGYC 1 cut(s) 189
BsaI GGTCTC 2 cut(s) 65, 1010
BsaJI CCNNGG 2 cut(s) 60, 974
BsaWI WCCGGW 1 cut(s) 587
BsaXI ACNNNNNCTCC 5 cut(s) 26, 361, 391, 1168, 1198
Bsc4I CCNNNNNNNGG 5 cut(s) 353, 594, 746, 942, 1244
Bse118I RCCGGY 3 cut(s) 74, 170, 587
Bse1I ACTGG 5 cut(s) 310, 898, 919, 998, 1157
Bse3DI GCAATG 2 cut(s) 455, 1057
BseBI CCWGG 5 cut(s) 604, 621, 666, 729, 882
BseDI CCNNGG 2 cut(s) 60, 974
BseGI GGATG 5 cut(s) 208, 343, 952, 1090, 1190
BseLI CCNNNNNNNGG 5 cut(s) 353, 594, 746, 942, 1244
BseMI GCAATG 2 cut(s) 455, 1057
BseMII CTCAG 2 cut(s) 899, 1006
BseNI ACTGG 5 cut(s) 310, 898, 919, 998, 1157
BseRI GAGGAG 1 cut(s) 980
BseSI GKGCMC 2 cut(s) 147, 1178
BseXI GCAGC 5 cut(s) 19, 211, 248, 858, 861
BseYI CCCAGC 1 cut(s) 1171
BsgI GTGCAG 2 cut(s) 501, 560
Bsh1236I CGCG 2 cut(s) 29, 62
Bsh1285I CGRYCG 2 cut(s) 19, 410
BshFI GGCC 7 cut(s) 78, 105, 136, 602, 607, 838, 880
BshNI GGYRCC 3 cut(s) 195, 703, 945
BshTI ACCGGT 1 cut(s) 587
BsiEI CGRYCG 2 cut(s) 19, 410
BsiHKAI GWGCWC 3 cut(s) 59, 379, 736
BsiHKCI CYCGRG 1 cut(s) 957
BsiSI CCGG 8 cut(s) 47, 75, 128, 138, 171, 410, 588, 1019
BslFI GGGAC 2 cut(s) 322, 1114
BslI CCNNNNNNNGG 5 cut(s) 353, 594, 746, 942, 1244
BsmAI GTCTC 6 cut(s) 65, 249, 549, 912, 992, 1010
BsmFI GGGAC 2 cut(s) 322, 1114
BsmI GAATGC 3 cut(s) 428, 899, 1239
BsnI GGCC 7 cut(s) 78, 105, 136, 602, 607, 838, 880
Bso31I GGTCTC 2 cut(s) 65, 1010
BsoBI CYCGRG 1 cut(s) 957
Bsp1286I GDGCHC 6 cut(s) 26, 59, 147, 379, 736, 1178
Bsp1407I TGTACA 1 cut(s) 1034
Bsp143I GATC 7 cut(s) 217, 362, 961, 1070, 1087, 1163, 1292
BspANI GGCC 7 cut(s) 78, 105, 136, 602, 607, 838, 880
BspCNI CTCAG 2 cut(s) 900, 1005
BspFNI CGCG 2 cut(s) 29, 62
BspMI ACCTGC 1 cut(s) 499
BspPI GGATC 5 cut(s) 357, 370, 1078, 1171, 1300
BspQI GCTCTTC 1 cut(s) 78
BspT107I GGYRCC 3 cut(s) 195, 703, 945
BspTNI GGTCTC 2 cut(s) 65, 1010
BsrBI CCGCTC 1 cut(s) 133
BsrDI GCAATG 2 cut(s) 455, 1057
BsrFI RCCGGY 3 cut(s) 74, 170, 587
BsrGI TGTACA 1 cut(s) 1034
BsrI ACTGG 5 cut(s) 310, 898, 919, 998, 1157
BssAI RCCGGY 3 cut(s) 74, 170, 587
BssECI CCNNGG 2 cut(s) 60, 974
BssMI GATC 7 cut(s) 217, 362, 961, 1070, 1087, 1163, 1292
BssNI GRCGYC 1 cut(s) 189
BssSI CACGAG 1 cut(s) 213
BssT1I CCWWGG 1 cut(s) 974
Bst2BI CACGAG 1 cut(s) 213
Bst2UI CCWGG 5 cut(s) 604, 621, 666, 729, 882
Bst4CI ACNGT 5 cut(s) 17, 152, 505, 745, 923
Bst6I CTCTTC 1 cut(s) 78
BstACI GRCGYC 1 cut(s) 189
BstAUI TGTACA 1 cut(s) 1034
BstC8I GCNNGC 1 cut(s) 1025
BstDEI CTNAG 2 cut(s) 908, 992
BstDSI CCRYGG 1 cut(s) 60
BstF5I GGATG 5 cut(s) 208, 343, 952, 1090, 1190
BstFNI CGCG 2 cut(s) 29, 62
BstKTI GATC 7 cut(s) 220, 365, 964, 1073, 1090, 1166, 1295
BstMAI GTCTC 6 cut(s) 65, 249, 549, 912, 992, 1010
BstMBI GATC 7 cut(s) 217, 362, 961, 1070, 1087, 1163, 1292
BstMCI CGRYCG 2 cut(s) 19, 410
BstMWI GCNNNNNNNGC 7 cut(s) 94, 111, 142, 195, 233, 245, 1054
BstNI CCWGG 5 cut(s) 604, 621, 666, 729, 882
BstSFI CTRYAG 1 cut(s) 249
BstSLI GKGCMC 2 cut(s) 147, 1178
BstUI CGCG 2 cut(s) 29, 62
BstV1I GCAGC 5 cut(s) 19, 211, 248, 858, 861
BstX2I RGATCY 4 cut(s) 362, 1070, 1163, 1292
BstYI RGATCY 4 cut(s) 362, 1070, 1163, 1292
BsuRI GGCC 7 cut(s) 78, 105, 136, 602, 607, 838, 880
BtgI CCRYGG 1 cut(s) 60
BtsCI GGATG 5 cut(s) 208, 343, 952, 1090, 1190
BveI ACCTGC 1 cut(s) 499
Cac8I GCNNGC 1 cut(s) 1025
CaiI CAGNNNCTG 1 cut(s) 515
Cfr10I RCCGGY 3 cut(s) 74, 170, 587
Cfr13I GGNCC 7 cut(s) 39, 135, 309, 647, 836, 932, 1101
Cfr42I CCGCGG 1 cut(s) 63
CseI GACGC 2 cut(s) 178, 315
CsiI ACCWGGT 1 cut(s) 619
Csp6I GTAC 7 cut(s) 13, 124, 506, 719, 821, 946, 1035
CspAI ACCGGT 1 cut(s) 587
CviAII CATG 5 cut(s) 163, 353, 559, 794, 1105
CviQI GTAC 7 cut(s) 13, 124, 506, 719, 821, 946, 1035
DdeI CTNAG 2 cut(s) 908, 992
DpnI GATC 7 cut(s) 219, 364, 963, 1072, 1089, 1165, 1294
DpnII GATC 7 cut(s) 217, 362, 961, 1070, 1087, 1163, 1292
DraI TTTAAA 1 cut(s) 300
DrdI GACNNNNNNGTC 1 cut(s) 939
DriI GACNNNNNGTC 1 cut(s) 984
DseDI GACNNNNNNGTC 1 cut(s) 939
EaeI YGGCCR 1 cut(s) 600
Eam1104I CTCTTC 1 cut(s) 78
Eam1105I GACNNNNNGTC 1 cut(s) 984
EarI CTCTTC 1 cut(s) 78
Ecl136II GAGCTC 2 cut(s) 57, 734
Eco130I CCWWGG 1 cut(s) 974
Eco147I AGGCCT 2 cut(s) 607, 880
Eco24I GRGCYC 3 cut(s) 26, 59, 736
Eco31I GGTCTC 2 cut(s) 65, 1010
Eco47I GGWCC 5 cut(s) 39, 309, 647, 932, 1101
Eco53kI GAGCTC 2 cut(s) 57, 734
Eco57I CTGAAG 1 cut(s) 1185
Eco88I CYCGRG 1 cut(s) 957
EcoICRI GAGCTC 2 cut(s) 57, 734
EcoO109I RGGNCCY 1 cut(s) 309
EcoRII CCWGG 5 cut(s) 602, 619, 664, 727, 880
EcoT14I CCWWGG 1 cut(s) 974
EcoT38I GRGCYC 3 cut(s) 26, 59, 736
ErhI CCWWGG 1 cut(s) 974
FaeI CATG 5 cut(s) 166, 356, 562, 797, 1108
FalI AAGNNNNNCTT 2 cut(s) 1315, 1347
FaqI GGGAC 2 cut(s) 322, 1114
FatI CATG 5 cut(s) 162, 352, 558, 793, 1104
FauI CCCGC 4 cut(s) 34, 58, 408, 492
FauNDI CATATG 1 cut(s) 628
FblI GTMKAC 1 cut(s) 156
Fnu4HI GCNGC 8 cut(s) 8, 63, 134, 199, 225, 237, 847, 850
FokI GGATG 5 cut(s) 195, 330, 939, 1077, 1177
FriOI GRGCYC 3 cut(s) 26, 59, 736
Fsp4HI GCNGC 8 cut(s) 8, 63, 134, 199, 225, 237, 847, 850
FspBI CTAG 3 cut(s) 843, 1230, 1304
GluI GCNGC 8 cut(s) 8, 63, 134, 199, 225, 237, 847, 850
GsaI CCCAGC 1 cut(s) 1175
GsuI CTGGAG 4 cut(s) 648, 750, 903, 936
HaeIII GGCC 7 cut(s) 78, 105, 136, 602, 607, 838, 880
HapII CCGG 8 cut(s) 47, 75, 128, 138, 171, 410, 588, 1019
HgaI GACGC 2 cut(s) 178, 315
Hin1I GRCGYC 1 cut(s) 189
Hin1II CATG 5 cut(s) 166, 356, 562, 797, 1108
HinfI GANTC 3 cut(s) 119, 658, 691
HpaII CCGG 8 cut(s) 47, 75, 128, 138, 171, 410, 588, 1019
HphI GGTGA 1 cut(s) 425
Hpy166II GTNNAC 1 cut(s) 157
Hpy188I TCNGA 6 cut(s) 21, 348, 684, 966, 1204, 1271
Hpy188III TCNNGA 4 cut(s) 215, 655, 959, 1133
Hpy8I GTNNAC 1 cut(s) 157
Hpy99I CGWCG 2 cut(s) 331, 1386
HpyAV CCTTC 5 cut(s) 558, 849, 877, 1197, 1248
HpyCH4III ACNGT 5 cut(s) 17, 152, 505, 745, 923
HpyF10VI GCNNNNNNNGC 7 cut(s) 94, 111, 142, 195, 233, 245, 1054
HpyF3I CTNAG 2 cut(s) 908, 992
Hsp92I GRCGYC 1 cut(s) 189
Hsp92II CATG 5 cut(s) 166, 356, 562, 797, 1108
KpnI GGTACC 1 cut(s) 949
KspI CCGCGG 1 cut(s) 63
Kzo9I GATC 7 cut(s) 217, 362, 961, 1070, 1087, 1163, 1292
LguI GCTCTTC 1 cut(s) 78
Lsp1109I GCAGC 5 cut(s) 19, 211, 248, 858, 861
MabI ACCWGGT 1 cut(s) 619
MaeI CTAG 3 cut(s) 843, 1230, 1304
MalI GATC 7 cut(s) 219, 364, 963, 1072, 1089, 1165, 1294
MbiI CCGCTC 1 cut(s) 133
MboI GATC 7 cut(s) 217, 362, 961, 1070, 1087, 1163, 1292
MboII GAAGA 5 cut(s) 95, 774, 1065, 1191, 1233
MflI RGATCY 4 cut(s) 362, 1070, 1163, 1292
MhlI GDGCHC 6 cut(s) 26, 59, 147, 379, 736, 1178
MlsI TGGCCA 1 cut(s) 602
MluCI AATT 9 cut(s) 98, 317, 473, 524, 569, 926, 982, 1217, 1221
MluNI TGGCCA 1 cut(s) 602
MmeI TCCRAC 4 cut(s) 66, 727, 1141, 1249
Mox20I TGGCCA 1 cut(s) 602
MroXI GAANNNNTTC 1 cut(s) 1237
MscI TGGCCA 1 cut(s) 602
MseI TTAA 4 cut(s) 299, 464, 710, 1220
MslI CAYNNNNRTG 2 cut(s) 213, 357
Msp20I TGGCCA 1 cut(s) 602
MspA1I CMGCKG 2 cut(s) 10, 62
MspI CCGG 8 cut(s) 47, 75, 128, 138, 171, 410, 588, 1019
Mva1269I GAATGC 3 cut(s) 428, 899, 1239
MvaI CCWGG 5 cut(s) 604, 621, 666, 729, 882
MvnI CGCG 2 cut(s) 29, 62
MwoI GCNNNNNNNGC 7 cut(s) 94, 111, 142, 195, 233, 245, 1054
NciI CCSGG 5 cut(s) 47, 128, 138, 411, 1020
NdeI CATATG 1 cut(s) 628
NdeII GATC 7 cut(s) 217, 362, 961, 1070, 1087, 1163, 1292
NlaIII CATG 5 cut(s) 166, 356, 562, 797, 1108
PaeR7I CTCGAG 1 cut(s) 957
PceI AGGCCT 2 cut(s) 607, 880
PciSI GCTCTTC 1 cut(s) 78
PctI GAATGC 3 cut(s) 428, 899, 1239
PdmI GAANNNNTTC 1 cut(s) 1237
PfeI GAWTC 3 cut(s) 119, 658, 691
PfoI TCCNGGA 2 cut(s) 664, 727
PinAI ACCGGT 1 cut(s) 587
PkrI GCNGC 8 cut(s) 9, 64, 135, 200, 226, 238, 848, 851
PpuMI RGGWCCY 1 cut(s) 309
PshBI ATTAAT 1 cut(s) 1220
Psp124BI GAGCTC 2 cut(s) 59, 736
Psp5II RGGWCCY 1 cut(s) 309
Psp6I CCWGG 5 cut(s) 602, 619, 664, 727, 880
PspFI CCCAGC 1 cut(s) 1171
PspGI CCWGG 5 cut(s) 602, 619, 664, 727, 880
PspPI GGNCC 7 cut(s) 39, 135, 309, 647, 836, 932, 1101
PspPPI RGGWCCY 1 cut(s) 309
PstNI CAGNNNCTG 1 cut(s) 515
PsuI RGATCY 4 cut(s) 362, 1070, 1163, 1292
PvuII CAGCTG 1 cut(s) 10
RsaI GTAC 7 cut(s) 14, 125, 507, 720, 822, 947, 1036
RsaNI GTAC 7 cut(s) 13, 124, 506, 719, 821, 946, 1035
RseI CAYNNNNRTG 2 cut(s) 213, 357
SacI GAGCTC 2 cut(s) 59, 736
SacII CCGCGG 1 cut(s) 63
SapI GCTCTTC 1 cut(s) 78
SaqAI TTAA 4 cut(s) 299, 464, 710, 1220
SatI GCNGC 8 cut(s) 8, 63, 134, 199, 225, 237, 847, 850
Sau3AI GATC 7 cut(s) 217, 362, 961, 1070, 1087, 1163, 1292
Sau96I GGNCC 7 cut(s) 39, 135, 309, 647, 836, 932, 1101
SduI GDGCHC 6 cut(s) 26, 59, 147, 379, 736, 1178
SexAI ACCWGGT 1 cut(s) 619
SfcI CTRYAG 1 cut(s) 249
Sfr274I CTCGAG 1 cut(s) 957
Sfr303I CCGCGG 1 cut(s) 63
SgrBI CCGCGG 1 cut(s) 63
SinI GGWCC 5 cut(s) 39, 309, 647, 932, 1101
SlaI CTCGAG 1 cut(s) 957
SmiMI CAYNNNNRTG 2 cut(s) 213, 357
SmlI CTYRAG 1 cut(s) 957
SmoI CTYRAG 1 cut(s) 957
Sse9I AATT 9 cut(s) 98, 317, 473, 524, 569, 926, 982, 1217, 1221
SseBI AGGCCT 2 cut(s) 607, 880
SspI AATATT 1 cut(s) 388
SspMI CTAG 3 cut(s) 843, 1230, 1304
SstI GAGCTC 2 cut(s) 59, 736
StuI AGGCCT 2 cut(s) 607, 880
StyI CCWWGG 1 cut(s) 974
TaaI ACNGT 5 cut(s) 17, 152, 505, 745, 923
TaqI TCGA 6 cut(s) 81, 958, 1086, 1134, 1210, 1388
TasI AATT 9 cut(s) 98, 317, 473, 524, 569, 926, 982, 1217, 1221
TatI WGTACW 3 cut(s) 718, 820, 1034
TauI GCSGC 3 cut(s) 65, 136, 201
TfiI GAWTC 3 cut(s) 119, 658, 691
Tru1I TTAA 4 cut(s) 299, 464, 710, 1220
Tru9I TTAA 4 cut(s) 299, 464, 710, 1220
TseI GCWGC 5 cut(s) 7, 224, 236, 846, 849
TspDTI ATGAA 5 cut(s) 435, 615, 873, 1116, 1179
TspGWI ACGGA 1 cut(s) 1004
VpaK11BI GGWCC 5 cut(s) 39, 309, 647, 932, 1101
VspI ATTAAT 1 cut(s) 1220
XapI RAATTY 3 cut(s) 317, 473, 926
XhoI CTCGAG 1 cut(s) 957
XmiI GTMKAC 1 cut(s) 156
XmnI GAANNNNTTC 1 cut(s) 1237
XspI CTAG 3 cut(s) 843, 1230, 1304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.