AT3G02110

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
370668 .. 373805
3138 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G02110.1

Sequence Viewer

Length: 1422 bp
ATGGCAATGGCAAAACTCGCAATTTTCACCACTCTTATGGCCATACTCGTAATGACATCTCAAGGAAGGATTCCAACAGAAGGAGGAGAGAAAGAAGCAGAGGCTGACAGAATTACGTCACTTCCAGGTCAGCCTAACGTCACGTTCGAGCAGTTTTCCGGCTACGTCACCGTCGATAAACTCTCCGGAAGATCACTCTTTTATTGGCTCACTGAAGCTTCTGACCTCCCTCTCTCCAAACCTCTCGTAATTTGGCTCAACGGAGGACCGGGATGTTCGTCGGTAGCGTACGGTGCGTCGGAGGAGATTGGACCATTCAGGATAAGCAAAGGTGGTTCCGGTTTGTATCTCAACAAGTTCGCATGGAACTCAATCTCCAATCTCTTGTTCCTCGAAGCTCCCGCCGGCGTCGGCTTCTCTTACACTAACCGCTCCTCCGATCTCTTCAACACCGGTGATCGCCGTACCGCCAAAGATTCACTTCAGTTTCTTATTCAATGGCTTCACCGGTTTCCGAGATACAACCACCGGGAAATCTACATCACCGGCGAGAGTTACGCCGGACATTACGTTCCTCAGCTGGCCAAAGAGATCATGAATTACAACAAACGATCAAAGAATCCGTTAAATCTCAAAGGAATCATGGTTGGAAACGCGGTGACGGACAATCACTATGATAACCTAGGAACGGTTTCGTATTGGTGGAGCCACGCGATGATCTCTGATCGGACGTATCATCAGTTGATAAGCACTTGCGATTTTAGTCGTCAGAAGGAATCTGATGAATGCGAAACCCTTTATTCTTACGCTATGGAGCAGGAGTTTGGTAACATTGATCAGTACAACATCTATGCGCCGCCGTGTAACAAGTCAAGCGACGGTGGTGGTAGCTACAATGGTTCTTCCGGCCGCCGGAGTATGCGGCTTCCTCACCTTCCCCACTCCGTATTGAGGAAAATTTCCGGTTATGATCCATGTACCGAGAGATATGCAGAGATCTATTATAACCGGCCTGATGTTCAGAAAGCTCTTCACGCCAACACCACCAAGATTCCGTATAAATGGACAGCTTGCAGTGAGGTGCTAAACCGGAATTGGAACGACACAGATTCAACGGTTCTCCCTATATACCGGGAAATGATTGCCGGCGGAATTAGAGTTTGGGTTTTCAGTGGTGACGTCGATTCAGTTGTACCAGTGACAGCTACTAGATACTCACTAGCAAGACTTAGTTTGAGTACCAAACTTCCTTGGTATCCTTGGTATGTCAAGAAACAGGTTGGAGGATGGACGGAAGTGTATGAAGGACTAACGTTCGTGACGGTTAGAGGAGCAGGTCACGAGGTGCCATTGTTCAAGCCACGTGCTGCTTTTGAGCTTTTTAAGTATTTCTTGAGAGGCAAGCCACTTCCAAAGGCTTAA

Protein Analysis

473

Amino Acids

53.4

Weight (kDa)

8.85

Isoelectric Point (pI)

40.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 42 - 467 5.2e-146 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010693)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1005
AatII GACGTC 1 cut(s) 1182
Acc36I ACCTGC 1 cut(s) 1325
AccB1I GGYRCC 1 cut(s) 1345
AccBSI CCGCTC 1 cut(s) 432
AccII CGCG 2 cut(s) 656, 713
AccIII TCCGGA 1 cut(s) 185
AciI CCGC 8 cut(s) 402, 430, 468, 656, 857, 910, 922, 1149
AclI AACGTT 1 cut(s) 1313
AclWI GGATC 1 cut(s) 965
AcoI YGGCCR 3 cut(s) 39, 582, 907
AcsI RAATTY 1 cut(s) 957
AcuI CTGAAG 2 cut(s) 234, 467
AcvI CACGTG 1 cut(s) 1364
AcyI GRCGYC 2 cut(s) 408, 1179
AdeI CACNNNGTG 1 cut(s) 1345
AfaI GTAC 6 cut(s) 290, 466, 842, 979, 1194, 1240
AfiI CCNNNNNNNGG 4 cut(s) 80, 688, 912, 951
AgeI ACCGGT 2 cut(s) 452, 507
AgsI TTSAA 4 cut(s) 448, 497, 1113, 1357
AjnI CCWGG 1 cut(s) 124
AjuI GAANNNNNNNTTGG 4 cut(s) 371, 403, 1144, 1176
AloI GAACNNNNNNTCC 4 cut(s) 359, 391, 555, 587
AluBI AGCT 8 cut(s) 218, 398, 580, 891, 1028, 1070, 1205, 1378
AluI AGCT 8 cut(s) 218, 398, 580, 891, 1028, 1070, 1205, 1378
AlwI GGATC 1 cut(s) 965
AlwNI CAGNNNCTG 1 cut(s) 104
Aor13HI TCCGGA 1 cut(s) 185
AoxI GGCC 4 cut(s) 39, 582, 907, 1010
ApeKI GCWGC 1 cut(s) 1367
ApoI RAATTY 1 cut(s) 957
AsiGI ACCGGT 2 cut(s) 452, 507
Asp700I GAANNNNTTC 1 cut(s) 691
AspA2I CCTAGG 1 cut(s) 682
AspLEI GCGC 1 cut(s) 856
AspS9I GGNCC 2 cut(s) 266, 311
AsuC2I CCSGG 3 cut(s) 270, 530, 1133
AsuHPI GGTGA 8 cut(s) 19, 160, 467, 497, 535, 670, 923, 1187
AvaII GGWCC 2 cut(s) 266, 311
AvrII CCTAGG 1 cut(s) 682
BalI TGGCCA 2 cut(s) 41, 584
BanI GGYRCC 1 cut(s) 1345
BauI CACGAG 1 cut(s) 1340
BbrPI CACGTG 1 cut(s) 1364
BbvCI CCTCAGC 1 cut(s) 576
BbvI GCAGC 1 cut(s) 1354
BccI CCATC 1 cut(s) 1281
BceAI ACGGC 2 cut(s) 447, 844
BcgI CGANNNNNNTGC 2 cut(s) 971, 1005
BciT130I CCWGG 1 cut(s) 126
BciVI GTATCC 1 cut(s) 1266
BclI TGATCA 1 cut(s) 835
BcnI CCSGG 3 cut(s) 270, 530, 1133
BfaI CTAG 3 cut(s) 683, 1209, 1220
BfuAI ACCTGC 1 cut(s) 1325
BfuI GTATCC 1 cut(s) 1266
BglII AGATCT 1 cut(s) 996
BisI GCNGC 4 cut(s) 857, 910, 923, 1368
BlnI CCTAGG 1 cut(s) 682
BlsI GCNGC 4 cut(s) 858, 911, 924, 1369
Bme1390I CCNGG 4 cut(s) 126, 270, 530, 1133
Bme18I GGWCC 2 cut(s) 266, 311
BmgT120I GGNCC 2 cut(s) 266, 311
BmiI GGNNCC 3 cut(s) 337, 707, 1347
BmrFI CCNGG 4 cut(s) 126, 270, 530, 1133
Bpu10I CCTNAGC 1 cut(s) 576
BpuEI CTTGAG 2 cut(s) 45, 1414
BpuMI CCSGG 3 cut(s) 270, 530, 1133
BsaAI YACGTR 1 cut(s) 1364
BsaHI GRCGYC 2 cut(s) 408, 1179
BsaJI CCNNGG 3 cut(s) 682, 1250, 1259
BsaWI WCCGGW 6 cut(s) 185, 338, 452, 507, 962, 1089
BsaXI ACNNNNNCTCC 6 cut(s) 359, 389, 419, 449, 806, 836
Bsc4I CCNNNNNNNGG 4 cut(s) 80, 688, 912, 951
Bse118I RCCGGY 6 cut(s) 404, 452, 507, 545, 1008, 1145
Bse1I ACTGG 1 cut(s) 1196
Bse3DI GCAATG 1 cut(s) 12
BseAI TCCGGA 1 cut(s) 185
BseBI CCWGG 1 cut(s) 126
BseDI CCNNGG 3 cut(s) 682, 1250, 1259
BseGI GGATG 2 cut(s) 278, 1292
BseLI CCNNNNNNNGG 4 cut(s) 80, 688, 912, 951
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 1 cut(s) 590
BseNI ACTGG 1 cut(s) 1196
BseRI GAGGAG 4 cut(s) 99, 317, 424, 1344
BseX3I CGGCCG 1 cut(s) 907
BseXI GCAGC 1 cut(s) 1354
Bsh1236I CGCG 2 cut(s) 656, 713
Bsh1285I CGRYCG 1 cut(s) 910
BshFI GGCC 4 cut(s) 41, 584, 909, 1012
BshNI GGYRCC 1 cut(s) 1345
BshTI ACCGGT 2 cut(s) 452, 507
BsiEI CGRYCG 1 cut(s) 910
BsiWI CGTACG 1 cut(s) 288
BslI CCNNNNNNNGG 4 cut(s) 80, 688, 912, 951
BsmI GAATGC 1 cut(s) 791
BsnI GGCC 4 cut(s) 41, 584, 909, 1012
Bsp13I TCCGGA 1 cut(s) 185
BspACI CCGC 8 cut(s) 402, 430, 468, 656, 857, 910, 922, 1149
BspANI GGCC 4 cut(s) 41, 584, 909, 1012
BspCNI CTCAG 1 cut(s) 589
BspEI TCCGGA 1 cut(s) 185
BspFNI CGCG 2 cut(s) 656, 713
BspHI TCATGA 1 cut(s) 594
BspLI GGNNCC 3 cut(s) 337, 707, 1347
BspMI ACCTGC 1 cut(s) 1325
BspPI GGATC 1 cut(s) 965
BspQI GCTCTTC 1 cut(s) 1035
BspT107I GGYRCC 1 cut(s) 1345
BsrBI CCGCTC 1 cut(s) 432
BsrDI GCAATG 1 cut(s) 12
BsrFI RCCGGY 6 cut(s) 404, 452, 507, 545, 1008, 1145
BsrI ACTGG 1 cut(s) 1196
BssAI RCCGGY 6 cut(s) 404, 452, 507, 545, 1008, 1145
BssECI CCNNGG 3 cut(s) 682, 1250, 1259
BssNI GRCGYC 2 cut(s) 408, 1179
BssSI CACGAG 1 cut(s) 1340
BssT1I CCWWGG 3 cut(s) 682, 1250, 1259
Bst2BI CACGAG 1 cut(s) 1340
Bst2UI CCWGG 1 cut(s) 126
Bst4CI ACNGT 6 cut(s) 172, 293, 691, 881, 1117, 1324
Bst6I CTCTTC 2 cut(s) 449, 1035
BstACI GRCGYC 2 cut(s) 408, 1179
BstBAI YACGTR 1 cut(s) 1364
BstC8I GCNNGC 5 cut(s) 406, 582, 1072, 1147, 1403
BstDEI CTNAG 2 cut(s) 576, 1229
BstF5I GGATG 2 cut(s) 278, 1292
BstFNI CGCG 2 cut(s) 656, 713
BstHHI GCGC 1 cut(s) 856
BstMCI CGRYCG 1 cut(s) 910
BstMWI GCNNNNNNNGC 3 cut(s) 17, 293, 1034
BstNI CCWGG 1 cut(s) 126
BstSCI CCNGG 4 cut(s) 124, 268, 528, 1131
BstUI CGCG 2 cut(s) 656, 713
BstV1I GCAGC 1 cut(s) 1354
BstX2I RGATCY 1 cut(s) 996
BstXI CCANNNNNNTGG 1 cut(s) 37
BstYI RGATCY 1 cut(s) 996
BstZI CGGCCG 1 cut(s) 907
BsuI GTATCC 1 cut(s) 1266
BsuRI GGCC 4 cut(s) 41, 584, 909, 1012
BtgZI GCGATG 1 cut(s) 728
BtsCI GGATG 2 cut(s) 278, 1292
BtsI GCAGTG 1 cut(s) 1081
BtsIMutI CAGTG 4 cut(s) 210, 1081, 1177, 1203
BveI ACCTGC 1 cut(s) 1325
Cac8I GCNNGC 5 cut(s) 406, 582, 1072, 1147, 1403
CaiI CAGNNNCTG 1 cut(s) 104
CciI TCATGA 1 cut(s) 594
CfoI GCGC 1 cut(s) 856
Cfr10I RCCGGY 6 cut(s) 404, 452, 507, 545, 1008, 1145
Cfr13I GGNCC 2 cut(s) 266, 311
CseI GACGC 2 cut(s) 285, 397
Csp6I GTAC 6 cut(s) 289, 465, 841, 978, 1193, 1239
CspAI ACCGGT 2 cut(s) 452, 507
CviAII CATG 4 cut(s) 363, 595, 643, 975
CviQI GTAC 6 cut(s) 289, 465, 841, 978, 1193, 1239
DdeI CTNAG 2 cut(s) 576, 1229
DraIII CACNNNGTG 1 cut(s) 1345
EaeI YGGCCR 3 cut(s) 39, 582, 907
EagI CGGCCG 1 cut(s) 907
Eam1104I CTCTTC 2 cut(s) 449, 1035
EarI CTCTTC 2 cut(s) 449, 1035
EciI GGCGGA 1 cut(s) 1164
EclXI CGGCCG 1 cut(s) 907
Eco130I CCWWGG 3 cut(s) 682, 1250, 1259
Eco47I GGWCC 2 cut(s) 266, 311
Eco52I CGGCCG 1 cut(s) 907
Eco57I CTGAAG 2 cut(s) 234, 467
Eco72I CACGTG 1 cut(s) 1364
EcoRII CCWGG 1 cut(s) 124
EcoT14I CCWWGG 3 cut(s) 682, 1250, 1259
ErhI CCWWGG 3 cut(s) 682, 1250, 1259
FaeI CATG 4 cut(s) 366, 598, 646, 978
FalI AAGNNNNNCTT 4 cut(s) 465, 497, 1376, 1408
FatI CATG 4 cut(s) 362, 594, 642, 974
FauI CCCGC 1 cut(s) 409
FbaI TGATCA 1 cut(s) 835
Fnu4HI GCNGC 4 cut(s) 857, 910, 923, 1368
FokI GGATG 2 cut(s) 285, 1299
Fsp4HI GCNGC 4 cut(s) 857, 910, 923, 1368
FspBI CTAG 3 cut(s) 683, 1209, 1220
GlaI GCGC 1 cut(s) 855
GluI GCNGC 4 cut(s) 857, 910, 923, 1368
HaeIII GGCC 4 cut(s) 41, 584, 909, 1012
HgaI GACGC 2 cut(s) 285, 397
HhaI GCGC 1 cut(s) 856
Hin1I GRCGYC 2 cut(s) 408, 1179
Hin1II CATG 4 cut(s) 366, 598, 646, 978
Hin6I GCGC 1 cut(s) 854
HinP1I GCGC 1 cut(s) 854
HindIII AAGCTT 1 cut(s) 216
HinfI GANTC 8 cut(s) 70, 476, 619, 639, 776, 1051, 1109, 1184
HphI GGTGA 8 cut(s) 19, 160, 467, 497, 535, 670, 923, 1187
Hpy188I TCNGA 9 cut(s) 223, 301, 439, 516, 724, 729, 771, 781, 1023
Hpy188III TCNNGA 7 cut(s) 186, 319, 595, 1270, 1318, 1340, 1393
Hpy99I CGWCG 6 cut(s) 176, 283, 301, 413, 881, 1184
HpyAV CCTTC 5 cut(s) 60, 74, 766, 944, 1298
HpyCH4III ACNGT 6 cut(s) 172, 293, 691, 881, 1117, 1324
HpyCH4IV ACGT 9 cut(s) 116, 138, 143, 165, 570, 731, 1179, 1313, 1363
HpyCH4V TGCA 2 cut(s) 992, 1074
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 293, 1034
HpyF3I CTNAG 2 cut(s) 576, 1229
HpySE526I ACGT 9 cut(s) 116, 138, 143, 165, 570, 731, 1179, 1313, 1363
Hsp92I GRCGYC 2 cut(s) 408, 1179
Hsp92II CATG 4 cut(s) 366, 598, 646, 978
HspAI GCGC 1 cut(s) 854
Kpn2I TCCGGA 1 cut(s) 185
KroI GCCGGC 2 cut(s) 404, 1145
KroNI GCCGGC 2 cut(s) 406, 1147
Ksp22I TGATCA 1 cut(s) 835
LguI GCTCTTC 1 cut(s) 1035
LmnI GCTCC 5 cut(s) 403, 437, 705, 814, 1331
Lsp1109I GCAGC 1 cut(s) 1354
MaeI CTAG 3 cut(s) 683, 1209, 1220
MaeII ACGT 9 cut(s) 116, 138, 143, 165, 570, 731, 1179, 1313, 1363
MbiI CCGCTC 1 cut(s) 432
MboII GAAGA 4 cut(s) 201, 436, 894, 1022
MflI RGATCY 1 cut(s) 996
MlsI TGGCCA 2 cut(s) 41, 584
MluCI AATT 7 cut(s) 21, 111, 249, 598, 957, 1093, 1152
MluNI TGGCCA 2 cut(s) 41, 584
MmeI TCCRAC 4 cut(s) 98, 279, 628, 1261
Mox20I TGGCCA 2 cut(s) 41, 584
MreI CGCCGGCG 1 cut(s) 404
MroI TCCGGA 1 cut(s) 185
MroNI GCCGGC 2 cut(s) 404, 1145
MroXI GAANNNNTTC 1 cut(s) 691
MscI TGGCCA 2 cut(s) 41, 584
MseI TTAA 3 cut(s) 626, 1383, 1420
MslI CAYNNNNRTG 1 cut(s) 35
Msp20I TGGCCA 2 cut(s) 41, 584
MspA1I CMGCKG 1 cut(s) 580
MspR9I CCNGG 4 cut(s) 126, 270, 530, 1133
Mva1269I GAATGC 1 cut(s) 791
MvaI CCWGG 1 cut(s) 126
MvnI CGCG 2 cut(s) 656, 713
MwoI GCNNNNNNNGC 3 cut(s) 17, 293, 1034
NaeI GCCGGC 2 cut(s) 406, 1147
NciI CCSGG 3 cut(s) 270, 530, 1133
NgoMIV GCCGGC 2 cut(s) 404, 1145
NlaIII CATG 4 cut(s) 366, 598, 646, 978
NlaIV GGNNCC 3 cut(s) 337, 707, 1347
NmuCI GTSAC 8 cut(s) 117, 139, 166, 658, 1175, 1198, 1318, 1337
PagI TCATGA 1 cut(s) 594
PciSI GCTCTTC 1 cut(s) 1035
PcsI WCGNNNNNNNCGW 3 cut(s) 144, 171, 284
PctI GAATGC 1 cut(s) 791
PdiI GCCGGC 2 cut(s) 406, 1147
PdmI GAANNNNTTC 1 cut(s) 691
PfeI GAWTC 8 cut(s) 70, 476, 619, 639, 776, 1051, 1109, 1184
Pfl23II CGTACG 1 cut(s) 288
PinAI ACCGGT 2 cut(s) 452, 507
PkrI GCNGC 4 cut(s) 858, 911, 924, 1369
PmaCI CACGTG 1 cut(s) 1364
PmlI CACGTG 1 cut(s) 1364
Ppu21I YACGTR 1 cut(s) 1364
PsiI TTATAA 1 cut(s) 1005
Psp1406I AACGTT 1 cut(s) 1313
Psp6I CCWGG 1 cut(s) 124
PspCI CACGTG 1 cut(s) 1364
PspGI CCWGG 1 cut(s) 124
PspLI CGTACG 1 cut(s) 288
PspN4I GGNNCC 3 cut(s) 337, 707, 1347
PspPI GGNCC 2 cut(s) 266, 311
PstNI CAGNNNCTG 1 cut(s) 104
PsuI RGATCY 1 cut(s) 996
PvuII CAGCTG 1 cut(s) 580
RsaI GTAC 6 cut(s) 290, 466, 842, 979, 1194, 1240
RsaNI GTAC 6 cut(s) 289, 465, 841, 978, 1193, 1239
RseI CAYNNNNRTG 1 cut(s) 35
SapI GCTCTTC 1 cut(s) 1035
SaqAI TTAA 3 cut(s) 626, 1383, 1420
SatI GCNGC 4 cut(s) 857, 910, 923, 1368
Sau96I GGNCC 2 cut(s) 266, 311
ScrFI CCNGG 4 cut(s) 126, 270, 530, 1133
SgrAI CRCCGGYG 3 cut(s) 404, 452, 545
SinI GGWCC 2 cut(s) 266, 311
SmiMI CAYNNNNRTG 1 cut(s) 35
SmlI CTYRAG 2 cut(s) 60, 1393
SmoI CTYRAG 2 cut(s) 60, 1393
Sse9I AATT 7 cut(s) 21, 111, 249, 598, 957, 1093, 1152
SsiI CCGC 8 cut(s) 402, 430, 468, 656, 857, 910, 922, 1149
SspMI CTAG 3 cut(s) 683, 1209, 1220
StyD4I CCNGG 4 cut(s) 124, 268, 528, 1131
StyI CCWWGG 3 cut(s) 682, 1250, 1259
TaaI ACNGT 6 cut(s) 172, 293, 691, 881, 1117, 1324
TaiI ACGT 9 cut(s) 119, 141, 146, 168, 573, 734, 1182, 1316, 1366
TaqI TCGA 4 cut(s) 147, 174, 393, 1182
TasI AATT 7 cut(s) 21, 111, 249, 598, 957, 1093, 1152
TatI WGTACW 1 cut(s) 840
TauI GCSGC 3 cut(s) 859, 912, 925
TfiI GAWTC 8 cut(s) 70, 476, 619, 639, 776, 1051, 1109, 1184
Tru1I TTAA 3 cut(s) 626, 1383, 1420
Tru9I TTAA 3 cut(s) 626, 1383, 1420
TscAI CASTG 4 cut(s) 217, 1081, 1177, 1203
TseFI GTSAC 8 cut(s) 117, 139, 166, 658, 1175, 1198, 1318, 1337
TseI GCWGC 1 cut(s) 1367
Tsp45I GTSAC 8 cut(s) 117, 139, 166, 658, 1175, 1198, 1318, 1337
TspDTI ATGAA 3 cut(s) 611, 798, 1317
TspGWI ACGGA 6 cut(s) 276, 612, 677, 934, 1044, 1307
TspRI CASTG 4 cut(s) 217, 1081, 1177, 1203
VpaK11BI GGWCC 2 cut(s) 266, 311
XapI RAATTY 1 cut(s) 957
XmaJI CCTAGG 1 cut(s) 682
XmnI GAANNNNTTC 1 cut(s) 691
XspI CTAG 3 cut(s) 683, 1209, 1220
ZraI GACGTC 1 cut(s) 1180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.