MD09G1066700.v1.1

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
4533268 .. 4538276
5009 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1066700.v1.1.491

Sequence Viewer

Length: 1428 bp
ATGGTTACCATGGACAAAACGCAGATCCTAATCTCCGTTTTGATTCTTGGGCTGTTTAGTTCTGCAAAGTGCAGCAGCCATGGAAGTGGAGTAGGAAGAGTTGTAAACAAAGAAGAAGAAGCCGACAGGATTGTGGGACTACCTGGACAACCCAAGGTTTCGTTTCAGCAGTTTTCAGGATACGTGACAGTAAATCAACATGTTGGGAGATCCCTCTTTTACTGGCTCACTGAGGCTGCCGACGATCCCTTGTCAAAGCCGCTTGTTGTTTGGCTCAATGGAGGTCCCGGCTGCTCTTCTGTGGCATATGGTGCATCGGAAGAGATAGGACCATTTAGAATAAACAAGAGTGCTTCAGGACTAAACTTGAACAAGTTCTCATGGAACACAGTTGCCAATCTCTTGTTCTTGGAAACTCCAGCCGGGGTCGGCTTCTCCTACAGCAACCGCTCCTCCGATCTCTTTGACACCGGTGATGCCCGCACTGCAAAGGACTCATTGCAATTCATAATCCGATGGCTGGATCGATTCCCACGATACAAGGGCAGAGAAGTATATCTCACAGGCGAGAGCTATGCAGGACATTATGTTCCTCAGCTAGCCAAAGCAATTTTGACCTACAATTCACAGTCCAAACACCCAATCAATCTTAAAGGAATAATGGTGGGTAATGCAGTGACAGACAACTACTACGATAACCTAGGGACAGTGACATACTGGTGGAGCCATGCAATGATCTCCGATAAAACCTACAAACAACTGATCAACACATGCGATTTTAGGAGGCAGAAGAATTCAGATCAATGTGAGTCGTTGTATAGCTACGCCATGGATAAAGAGTTTGGAAACATAGACCAGTATAACATTTACGCACCACCCTGCAACAACTCCGATGGAAGCACAAGAACTTCTACAAGGCAGACTGCTATGCATTTGCCTCATCGACCGATGTTCCGGCAAATATCCGGCTATGATCCTTGTACGGAGAAATATGCTGAACTTTATTACAACAGGCCAGATGTACAGAAAGCACTCCATGCCAACATAACCAAAATTCCTTATAAGTGGACTGCTTGCAGTGAGGTTTTAAATCGAAACTGGAACGACACAGATGTATCGGTTCTTCCTATTTACAGGGATATGATAGCTGCTGGTTTAAGGATTTGGGTTTTCAGTGGAGATGTGGACTCAGTGGTGCCAGTCACAGCCACTAGATATTCCCTTGCACATCTCAAATTAGCTACCAAAATTCCATGGTACCCCTGGTATACTAAGAAGCAGGTGGGAGGGTGGACAGAGGTATACGAAGGGCTGACATTTGCAACAGTGAGAGGAGCAGGTCATGAAGTTCCACTTTTCAAGCCAAGAGCAGCTCTTGAGCTTTTCAGATCATTTATTCAAGGGAGGCCTCTTCCCAAATCCTCATGA

Protein Analysis

476

Amino Acids

53.48

Weight (kDa)

8.98

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 48 - 468 1.1e-144 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010693)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1062
AarI CACCTGC 1 cut(s) 1270
Acc36I ACCTGC 2 cut(s) 1270, 1328
Acc65I GGTACC 1 cut(s) 1257
AccB1I GGYRCC 2 cut(s) 1195, 1257
AccBSI CCGCTC 1 cut(s) 450
AccI GTMKAC 2 cut(s) 1268, 1302
AciI CCGC 3 cut(s) 260, 448, 481
AclWI GGATC 5 cut(s) 19, 204, 239, 531, 968
AcsI RAATTY 3 cut(s) 793, 1053, 1248
AcuI CTGAAG 1 cut(s) 339
AfaI GTAC 3 cut(s) 982, 1023, 1259
AfiI CCNNNNNNNGG 1 cut(s) 520
AflIII ACRYGT 1 cut(s) 199
AgeI ACCGGT 1 cut(s) 470
AgsI TTSAA 3 cut(s) 370, 1360, 1400
AjnI CCWGG 2 cut(s) 142, 1262
AjuI GAANNNNNNNTTGG 2 cut(s) 389, 421
AloI GAACNNNNNNTCC 2 cut(s) 573, 605
AluBI AGCT 7 cut(s) 573, 598, 822, 1148, 1241, 1373, 1381
AluI AGCT 7 cut(s) 573, 598, 822, 1148, 1241, 1373, 1381
AlwI GGATC 5 cut(s) 19, 204, 239, 531, 968
AoxI GGCC 2 cut(s) 1013, 1406
ApeKI GCWGC 6 cut(s) 72, 75, 236, 291, 1148, 1370
ApoI RAATTY 3 cut(s) 793, 1053, 1248
AsiGI ACCGGT 1 cut(s) 470
Asp700I GAANNNNTTC 1 cut(s) 374
Asp718I GGTACC 1 cut(s) 1257
AspA2I CCTAGG 1 cut(s) 700
AspS9I GGNCC 2 cut(s) 284, 329
AsuC2I CCSGG 2 cut(s) 288, 424
AsuHPI GGTGA 1 cut(s) 485
AsuNHI GCTAGC 1 cut(s) 598
AvaII GGWCC 2 cut(s) 284, 329
AvrII CCTAGG 1 cut(s) 700
BaeI ACNNNNGTAYC 2 cut(s) 1098, 1131
BanI GGYRCC 2 cut(s) 1195, 1257
BarI GAAGNNNNNNTAC 2 cut(s) 1107, 1139
BbvCI CCTCAGC 1 cut(s) 594
BbvI GCAGC 6 cut(s) 84, 87, 223, 278, 1135, 1382
BccI CCATC 2 cut(s) 510, 887
BcgI CGANNNNNNTGC 2 cut(s) 557, 591
BciT130I CCWGG 2 cut(s) 144, 1264
BciVI GTATCC 1 cut(s) 173
BclI TGATCA 1 cut(s) 762
BcnI CCSGG 2 cut(s) 288, 424
BfaI CTAG 3 cut(s) 599, 701, 1212
BfmI CTRYAG 1 cut(s) 439
BfuAI ACCTGC 2 cut(s) 1270, 1328
BfuI GTATCC 1 cut(s) 173
BisI GCNGC 7 cut(s) 73, 76, 237, 260, 292, 1149, 1371
BlnI CCTAGG 1 cut(s) 700
BlsI GCNGC 7 cut(s) 74, 77, 238, 261, 293, 1150, 1372
Bme1390I CCNGG 4 cut(s) 144, 288, 424, 1264
Bme18I GGWCC 2 cut(s) 284, 329
BmgT120I GGNCC 2 cut(s) 284, 329
BmiI GGNNCC 4 cut(s) 286, 725, 1197, 1259
BmrFI CCNGG 4 cut(s) 144, 288, 424, 1264
BmsI GCATC 2 cut(s) 323, 466
BmtI GCTAGC 1 cut(s) 602
BpmI CTGGAG 1 cut(s) 402
Bpu10I CCTNAGC 1 cut(s) 594
BpuEI CTTGAG 1 cut(s) 1397
BpuMI CCSGG 2 cut(s) 288, 424
Bsa29I ATCGAT 1 cut(s) 526
BsaAI YACGTR 1 cut(s) 184
BsaBI GATNNNNATC 1 cut(s) 29
BsaJI CCNNGG 8 cut(s) 9, 79, 153, 423, 700, 828, 1253, 1262
BsaWI WCCGGW 1 cut(s) 470
BsaXI ACNNNNNCTCC 2 cut(s) 437, 467
Bsc4I CCNNNNNNNGG 1 cut(s) 520
Bse118I RCCGGY 1 cut(s) 470
Bse1I ACTGG 5 cut(s) 227, 722, 856, 1103, 1199
Bse3DI GCAATG 2 cut(s) 497, 738
Bse8I GATNNNNATC 1 cut(s) 29
BseBI CCWGG 2 cut(s) 144, 1264
BseCI ATCGAT 1 cut(s) 526
BseDI CCNNGG 8 cut(s) 9, 79, 153, 423, 700, 828, 1253, 1262
BseJI GATNNNNATC 1 cut(s) 29
BseLI CCNNNNNNNGG 1 cut(s) 520
BseMI GCAATG 2 cut(s) 497, 738
BseMII CTCAG 3 cut(s) 222, 608, 1203
BseNI ACTGG 5 cut(s) 227, 722, 856, 1103, 1199
BseRI GAGGAG 2 cut(s) 442, 1347
BseXI GCAGC 6 cut(s) 84, 87, 223, 278, 1135, 1382
BsgI GTGCAG 1 cut(s) 91
Bsh1285I CGRYCG 1 cut(s) 947
BshFI GGCC 2 cut(s) 1015, 1408
BshNI GGYRCC 2 cut(s) 1195, 1257
BshTI ACCGGT 1 cut(s) 470
BshVI ATCGAT 1 cut(s) 526
BsiEI CGRYCG 1 cut(s) 947
BsiSI CCGG 5 cut(s) 288, 423, 471, 955, 966
BslFI GGGAC 3 cut(s) 150, 270, 718
BslI CCNNNNNNNGG 1 cut(s) 520
BsmFI GGGAC 3 cut(s) 150, 270, 718
BsnI GGCC 2 cut(s) 1015, 1408
Bsp1407I TGTACA 1 cut(s) 1021
Bsp19I CCATGG 4 cut(s) 9, 79, 828, 1253
BspACI CCGC 3 cut(s) 260, 448, 481
BspANI GGCC 2 cut(s) 1015, 1408
BspCNI CTCAG 3 cut(s) 223, 607, 1202
BspDI ATCGAT 1 cut(s) 526
BspHI TCATGA 2 cut(s) 1342, 1424
BspLI GGNNCC 4 cut(s) 286, 725, 1197, 1259
BspMI ACCTGC 2 cut(s) 1270, 1328
BspOI GCTAGC 1 cut(s) 602
BspPI GGATC 5 cut(s) 19, 204, 239, 531, 968
BspQI GCTCTTC 1 cut(s) 301
BspT107I GGYRCC 2 cut(s) 1195, 1257
BsrBI CCGCTC 1 cut(s) 450
BsrDI GCAATG 2 cut(s) 497, 738
BsrFI RCCGGY 1 cut(s) 470
BsrGI TGTACA 1 cut(s) 1021
BsrI ACTGG 5 cut(s) 227, 722, 856, 1103, 1199
BssAI RCCGGY 1 cut(s) 470
BssECI CCNNGG 8 cut(s) 9, 79, 153, 423, 700, 828, 1253, 1262
BssNAI GTATAC 2 cut(s) 1269, 1303
BssT1I CCWWGG 6 cut(s) 9, 79, 153, 700, 828, 1253
Bst1107I GTATAC 2 cut(s) 1269, 1303
Bst2UI CCWGG 2 cut(s) 144, 1264
Bst4CI ACNGT 5 cut(s) 190, 391, 630, 709, 1327
Bst6I CTCTTC 4 cut(s) 91, 301, 315, 1416
BstAPI GCANNNNNTGC 2 cut(s) 311, 1037
BstAUI TGTACA 1 cut(s) 1021
BstBAI YACGTR 1 cut(s) 184
BstC8I GCNNGC 3 cut(s) 481, 600, 1075
BstDEI CTNAG 4 cut(s) 231, 594, 1189, 1272
BstDSI CCRYGG 4 cut(s) 9, 79, 828, 1253
BstEII GGTNACC 1 cut(s) 4
BstMCI CGRYCG 1 cut(s) 947
BstMWI GCNNNNNNNGC 3 cut(s) 311, 485, 1037
BstNI CCWGG 2 cut(s) 144, 1264
BstNSI RCATGY 2 cut(s) 203, 774
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 4 cut(s) 142, 286, 422, 1262
BstSFI CTRYAG 1 cut(s) 439
BstV1I GCAGC 6 cut(s) 84, 87, 223, 278, 1135, 1382
BstX2I RGATCY 2 cut(s) 24, 209
BstXI CCANNNNNNTGG 1 cut(s) 86
BstYI RGATCY 2 cut(s) 24, 209
BstZ17I GTATAC 2 cut(s) 1269, 1303
Bsu15I ATCGAT 1 cut(s) 526
BsuI GTATCC 1 cut(s) 173
BsuRI GGCC 2 cut(s) 1015, 1408
BsuTUI ATCGAT 1 cut(s) 526
BtgI CCRYGG 4 cut(s) 9, 79, 828, 1253
BtsI GCAGTG 3 cut(s) 483, 681, 1084
BtsIMutI CAGTG 8 cut(s) 228, 483, 681, 714, 1084, 1180, 1197, 1332
BveI ACCTGC 2 cut(s) 1270, 1328
Cac8I GCNNGC 3 cut(s) 481, 600, 1075
CciI TCATGA 2 cut(s) 1342, 1424
Cfr10I RCCGGY 1 cut(s) 470
Cfr13I GGNCC 2 cut(s) 284, 329
ClaI ATCGAT 1 cut(s) 526
Csp6I GTAC 3 cut(s) 981, 1022, 1258
CspAI ACCGGT 1 cut(s) 470
CviQI GTAC 3 cut(s) 981, 1022, 1258
DdeI CTNAG 4 cut(s) 231, 594, 1189, 1272
DraI TTTAAA 1 cut(s) 1089
Eam1104I CTCTTC 4 cut(s) 91, 301, 315, 1416
EarI CTCTTC 4 cut(s) 91, 301, 315, 1416
Eco130I CCWWGG 6 cut(s) 9, 79, 153, 700, 828, 1253
Eco147I AGGCCT 1 cut(s) 1408
Eco47I GGWCC 2 cut(s) 284, 329
Eco57I CTGAAG 1 cut(s) 339
Eco91I GGTNACC 1 cut(s) 4
EcoO109I RGGNCCY 1 cut(s) 284
EcoO65I GGTNACC 1 cut(s) 4
EcoRI GAATTC 1 cut(s) 793
EcoRII CCWGG 2 cut(s) 142, 1262
EcoT14I CCWWGG 6 cut(s) 9, 79, 153, 700, 828, 1253
EcoT22I ATGCAT 1 cut(s) 933
ErhI CCWWGG 6 cut(s) 9, 79, 153, 700, 828, 1253
FalI AAGNNNNNCTT 2 cut(s) 1338, 1370
FaqI GGGAC 3 cut(s) 150, 270, 718
FauI CCCGC 1 cut(s) 488
FauNDI CATATG 1 cut(s) 307
FbaI TGATCA 1 cut(s) 762
FblI GTMKAC 2 cut(s) 1268, 1302
Fnu4HI GCNGC 7 cut(s) 73, 76, 237, 260, 292, 1149, 1371
Fsp4HI GCNGC 7 cut(s) 73, 76, 237, 260, 292, 1149, 1371
FspBI CTAG 3 cut(s) 599, 701, 1212
GluI GCNGC 7 cut(s) 73, 76, 237, 260, 292, 1149, 1371
GsuI CTGGAG 1 cut(s) 402
HaeIII GGCC 2 cut(s) 1015, 1408
HapII CCGG 5 cut(s) 288, 423, 471, 955, 966
HinfI GANTC 5 cut(s) 43, 494, 528, 809, 1187
HpaII CCGG 5 cut(s) 288, 423, 471, 955, 966
HphI GGTGA 1 cut(s) 485
Hpy166II GTNNAC 6 cut(s) 106, 1068, 1186, 1269, 1293, 1303
Hpy188I TCNGA 7 cut(s) 319, 457, 515, 742, 799, 892, 1388
Hpy188III TCNNGA 5 cut(s) 177, 357, 1343, 1376, 1425
Hpy8I GTNNAC 6 cut(s) 106, 1068, 1186, 1269, 1293, 1303
Hpy99I CGWCG 1 cut(s) 245
HpyAV CCTTC 1 cut(s) 1301
HpyCH4III ACNGT 5 cut(s) 190, 391, 630, 709, 1327
HpyCH4IV ACGT 1 cut(s) 183
HpyF10VI GCNNNNNNNGC 3 cut(s) 311, 485, 1037
HpyF3I CTNAG 4 cut(s) 231, 594, 1189, 1272
HpySE526I ACGT 1 cut(s) 183
KpnI GGTACC 1 cut(s) 1261
Ksp22I TGATCA 1 cut(s) 762
LguI GCTCTTC 1 cut(s) 301
LmnI GCTCC 3 cut(s) 455, 723, 1334
Lsp1109I GCAGC 6 cut(s) 84, 87, 223, 278, 1135, 1382
LweI GCATC 2 cut(s) 323, 466
MaeI CTAG 3 cut(s) 599, 701, 1212
MaeII ACGT 1 cut(s) 183
MaeIII GTNAC 5 cut(s) 4, 184, 676, 709, 1201
MbiI CCGCTC 1 cut(s) 450
MboII GAAGA 8 cut(s) 108, 125, 128, 288, 332, 802, 1115, 1403
MflI RGATCY 2 cut(s) 24, 209
MluCI AATT 7 cut(s) 503, 609, 622, 793, 1053, 1235, 1248
MlyI GAGTC 3 cut(s) 488, 818, 1181
Mph1103I ATGCAT 1 cut(s) 933
MroXI GAANNNNTTC 1 cut(s) 374
MseI TTAA 3 cut(s) 651, 1088, 1157
MslI CAYNNNNRTG 2 cut(s) 84, 718
MspI CCGG 5 cut(s) 288, 423, 471, 955, 966
MspR9I CCNGG 4 cut(s) 144, 288, 424, 1264
MvaI CCWGG 2 cut(s) 144, 1264
MwoI GCNNNNNNNGC 3 cut(s) 311, 485, 1037
NciI CCSGG 2 cut(s) 288, 424
NcoI CCATGG 4 cut(s) 9, 79, 828, 1253
NdeI CATATG 1 cut(s) 307
NheI GCTAGC 1 cut(s) 598
NlaIV GGNNCC 4 cut(s) 286, 725, 1197, 1259
NmuCI GTSAC 4 cut(s) 184, 676, 709, 1201
NsiI ATGCAT 1 cut(s) 933
NspI RCATGY 2 cut(s) 203, 774
PagI TCATGA 2 cut(s) 1342, 1424
PaqCI CACCTGC 1 cut(s) 1270
PceI AGGCCT 1 cut(s) 1408
PciI ACATGT 1 cut(s) 199
PciSI GCTCTTC 1 cut(s) 301
PcsI WCGNNNNNNNCGW 1 cut(s) 532
PdmI GAANNNNTTC 1 cut(s) 374
PfeI GAWTC 2 cut(s) 43, 528
PinAI ACCGGT 1 cut(s) 470
PkrI GCNGC 7 cut(s) 74, 77, 238, 261, 293, 1150, 1372
PleI GAGTC 3 cut(s) 488, 817, 1181
PpsI GAGTC 3 cut(s) 488, 817, 1181
Ppu21I YACGTR 1 cut(s) 184
PpuMI RGGWCCY 1 cut(s) 284
PscI ACATGT 1 cut(s) 199
PsiI TTATAA 1 cut(s) 1062
Psp5II RGGWCCY 1 cut(s) 284
Psp6I CCWGG 2 cut(s) 142, 1262
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 142, 1262
PspN4I GGNNCC 4 cut(s) 286, 725, 1197, 1259
PspPI GGNCC 2 cut(s) 284, 329
PspPPI RGGWCCY 1 cut(s) 284
PsuI RGATCY 2 cut(s) 24, 209
RsaI GTAC 3 cut(s) 982, 1023, 1259
RsaNI GTAC 3 cut(s) 981, 1022, 1258
RseI CAYNNNNRTG 2 cut(s) 84, 718
SapI GCTCTTC 1 cut(s) 301
SaqAI TTAA 3 cut(s) 651, 1088, 1157
SatI GCNGC 7 cut(s) 73, 76, 237, 260, 292, 1149, 1371
Sau96I GGNCC 2 cut(s) 284, 329
SchI GAGTC 3 cut(s) 488, 818, 1181
ScrFI CCNGG 4 cut(s) 144, 288, 424, 1264
SfaNI GCATC 2 cut(s) 323, 466
SfcI CTRYAG 1 cut(s) 439
SgrAI CRCCGGYG 1 cut(s) 470
SinI GGWCC 2 cut(s) 284, 329
SmiMI CAYNNNNRTG 2 cut(s) 84, 718
SmlI CTYRAG 1 cut(s) 1376
SmoI CTYRAG 1 cut(s) 1376
Sse9I AATT 7 cut(s) 503, 609, 622, 793, 1053, 1235, 1248
SseBI AGGCCT 1 cut(s) 1408
SsiI CCGC 3 cut(s) 260, 448, 481
SspMI CTAG 3 cut(s) 599, 701, 1212
StuI AGGCCT 1 cut(s) 1408
StyD4I CCNGG 4 cut(s) 142, 286, 422, 1262
StyI CCWWGG 6 cut(s) 9, 79, 153, 700, 828, 1253
TaaI ACNGT 5 cut(s) 190, 391, 630, 709, 1327
TaiI ACGT 1 cut(s) 186
TaqI TCGA 3 cut(s) 526, 943, 1093
TaqII GACCGA 1 cut(s) 961
TasI AATT 7 cut(s) 503, 609, 622, 793, 1053, 1235, 1248
TatI WGTACW 1 cut(s) 1021
TauI GCSGC 1 cut(s) 262
TfiI GAWTC 2 cut(s) 43, 528
Tru1I TTAA 3 cut(s) 651, 1088, 1157
Tru9I TTAA 3 cut(s) 651, 1088, 1157
TscAI CASTG 8 cut(s) 235, 490, 681, 714, 1084, 1180, 1197, 1332
TseFI GTSAC 4 cut(s) 184, 676, 709, 1201
TseI GCWGC 6 cut(s) 72, 75, 236, 291, 1148, 1370
Tsp45I GTSAC 4 cut(s) 184, 676, 709, 1201
TspDTI ATGAA 2 cut(s) 496, 1359
TspGWI ACGGA 2 cut(s) 25, 998
TspRI CASTG 8 cut(s) 235, 490, 681, 714, 1084, 1180, 1197, 1332
VpaK11BI GGWCC 2 cut(s) 284, 329
XapI RAATTY 3 cut(s) 793, 1053, 1248
XceI RCATGY 2 cut(s) 203, 774
XcmI CCANNNNNNNNNTGG 1 cut(s) 1260
XmaJI CCTAGG 1 cut(s) 700
XmiI GTMKAC 2 cut(s) 1268, 1302
XmnI GAANNNNTTC 1 cut(s) 374
XspI CTAG 3 cut(s) 599, 701, 1212
Zsp2I ATGCAT 1 cut(s) 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.