Rw2G048710

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
76263008 .. 76267249
4242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G048710.1

Sequence Viewer

Length: 1386 bp
ATGGTCAAAACACACAGCACCCTCCTACTGATTTCCATGGTCTCTGTTTTGCTTCTGGGGCTGTTCATAAGCCCAAGTCATGGATCAGTGAATGAAGATGAAGAAGCTGATAGGATTGTATCACTTCCAGGGCAACCCAAGGTCTCTTTCCAGCAGTTTTCGGGTTACGTCACTGTAAATCACAAGGTTGGAAGAGCCCTCTTTTACTGGCTTACTGAGGCTGCTGATAAAGATCCCCTGTCTAAGCCTCTGGTCATTTGGCTCAATGGAGGCCCTGGTTGCTCGTCGGTGGCATATGGTGCATCGGAAGAGATAGGTCCATTCAGAATAAACAAGACAGCTTCGGGTCTGTACTTGAACAAGTTCTCATGGAACACCGAGGCCAACCTCTTGTTCTTGGAAACTCCAGCCGGTGTTGGCTTCTCCTACTCCAATCGCTCCGCAGATCTCTTTGATACCGGGGATGGCCGCACGGCAAAGGACTCACTGAACTTCATAATCGGATGGTTGGATCGATTTCCCCGATACAAGAACCGAGAACTTGCCAAAGCGATTATCATTTACAATGAAAACTCCAAGCACCCATTAATCTCAAGGAATAATGGTATGTTGCATATATATGTGGGTAATGCCGTGACAGACAACTACTATGATAACCTGGGGACAGTAACATACTGGTGGAGTCACGCCATGATCTCCGATAAGACCTACAAGCAGCTTATCCACACTTGTGATTTTCGAAATCAGAAGAACTCTGACGAATGTGAATCACTGTATAGCTACGCGATGGATAAAGAATTTGGGAACATAGACCAGTACAACATCTATGCACCACCCTGCAACAACTCTGATGGTAGCACTACTTCAATGTCTACGAGACAGACTATGCGTTTGCCTCATCGACCGATGTTTCGACAAATATCTGGCTATGATCCTTGTACGGAAAAATATGCTGAGTTATATTACAATAGACCAGAAGTACAGAAAGCATTCCATGCCAACATTACTAAAATTCCTTATAAGTGGACTGCTTGCAGTGAGGTTTTAAATCGAAATTGGAACGATACAGATGTATCTGTTCTTCCTATTTACAAGGACATGATTGCTGCTGGTTTGAGAATTTGGGTTTTCAGTGGAGACGTTGACTCAGTGGTGCCGGTCACAGCGACCAGGTATTCCCTTGCACAACTCAAATTGGCAATCAAAATTCCATGGTATCCCTGGTACACAAAGAAACAGGTGGGAGGTTGGACAGAGGTTTACGAAGGGTTGACATTTGCAACAGTGAGAGGAGCAGGTCATGAAGTCCCGCTATTCAAGCCAAGAGCAGCTCTTCAGCTTTTTAAATCCTTTATTAAGGGGAAGCCCCTTCCAAAGTCGTCATGA

Protein Analysis

461

Amino Acids

52.15

Weight (kDa)

8.74

Isoelectric Point (pI)

32.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 43 - 454 6.2e-116 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0010693)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1020
Acc36I ACCTGC 1 cut(s) 1286
AccB1I GGYRCC 1 cut(s) 1153
AccB7I CCANNNNNTGG 1 cut(s) 80
AccI GTMKAC 1 cut(s) 872
AccII CGCG 1 cut(s) 785
AciI CCGC 3 cut(s) 441, 469, 1310
AclWI GGATC 4 cut(s) 91, 227, 519, 926
AcoI YGGCCR 1 cut(s) 466
AcsI RAATTY 4 cut(s) 797, 1011, 1119, 1206
AcuI CTGAAG 1 cut(s) 1319
AfaI GTAC 5 cut(s) 353, 818, 940, 981, 1226
AfiI CCNNNNNNNGG 1 cut(s) 80
AgsI TTSAA 3 cut(s) 358, 867, 1318
AjnI CCWGG 5 cut(s) 127, 274, 657, 1169, 1220
AjuI GAANNNNNNNTTGG 4 cut(s) 131, 163, 377, 409
AleI CACNNNNGTG 1 cut(s) 729
AluBI AGCT 6 cut(s) 107, 341, 718, 780, 1331, 1339
AluI AGCT 6 cut(s) 107, 341, 718, 780, 1331, 1339
Alw26I GTCTC 4 cut(s) 46, 148, 871, 1131
AlwI GGATC 4 cut(s) 91, 227, 519, 926
AoxI GGCC 3 cut(s) 271, 381, 466
ApeKI GCWGC 4 cut(s) 221, 715, 1106, 1328
ApoI RAATTY 4 cut(s) 797, 1011, 1119, 1206
ArsI GACNNNNNNTTYG 4 cut(s) 874, 894, 906, 926
AseI ATTAAT 1 cut(s) 587
Asp700I GAANNNNTTC 2 cut(s) 362, 989
AspS9I GGNCC 2 cut(s) 272, 317
AsuC2I CCSGG 1 cut(s) 460
AsuII TTCGAA 1 cut(s) 739
AvaII GGWCC 1 cut(s) 317
BaeI ACNNNNGTAYC 4 cut(s) 1056, 1056, 1089, 1089
BanI GGYRCC 1 cut(s) 1153
BanII GRGCYC 1 cut(s) 199
BarI GAAGNNNNNNTAC 4 cut(s) 847, 879, 1065, 1097
BbvI GCAGC 4 cut(s) 208, 727, 1093, 1340
BccI CCATC 4 cut(s) 458, 498, 781, 845
BceAI ACGGC 2 cut(s) 489, 617
BciT130I CCWGG 5 cut(s) 129, 276, 659, 1171, 1222
BciVI GTATCC 1 cut(s) 1227
BcnI CCSGG 1 cut(s) 460
BcoDI GTCTC 4 cut(s) 46, 148, 871, 1131
BfuAI ACCTGC 1 cut(s) 1286
BfuI GTATCC 1 cut(s) 1227
BglII AGATCT 1 cut(s) 445
BisI GCNGC 5 cut(s) 222, 469, 716, 1107, 1329
BlsI GCNGC 5 cut(s) 223, 470, 717, 1108, 1330
Bme1390I CCNGG 6 cut(s) 129, 276, 460, 659, 1171, 1222
Bme18I GGWCC 1 cut(s) 317
BmgT120I GGNCC 2 cut(s) 272, 317
BmiI GGNNCC 1 cut(s) 1155
BmrFI CCNGG 6 cut(s) 129, 276, 460, 659, 1171, 1222
BmsI GCATC 1 cut(s) 311
BpmI CTGGAG 1 cut(s) 390
Bpu14I TTCGAA 1 cut(s) 739
BpuEI CTTGAG 1 cut(s) 577
BpuMI CCSGG 1 cut(s) 460
Bsa29I ATCGAT 1 cut(s) 514
BsaBI GATNNNNATC 1 cut(s) 231
BsaI GGTCTC 2 cut(s) 46, 148
BsaJI CCNNGG 9 cut(s) 36, 128, 138, 274, 378, 459, 658, 1211, 1220
Bsc4I CCNNNNNNNGG 1 cut(s) 80
Bse118I RCCGGY 2 cut(s) 410, 1156
Bse1I ACTGG 3 cut(s) 212, 680, 814
Bse8I GATNNNNATC 1 cut(s) 231
BseBI CCWGG 5 cut(s) 129, 276, 659, 1171, 1222
BseCI ATCGAT 1 cut(s) 514
BseDI CCNNGG 9 cut(s) 36, 128, 138, 274, 378, 459, 658, 1211, 1220
BseGI GGATG 2 cut(s) 469, 509
BseJI GATNNNNATC 1 cut(s) 231
BseLI CCNNNNNNNGG 1 cut(s) 80
BseMII CTCAG 3 cut(s) 207, 945, 1161
BseNI ACTGG 3 cut(s) 212, 680, 814
BseRI GAGGAG 1 cut(s) 1305
BseXI GCAGC 4 cut(s) 208, 727, 1093, 1340
Bsh1236I CGCG 1 cut(s) 785
Bsh1285I CGRYCG 1 cut(s) 905
BshFI GGCC 3 cut(s) 273, 383, 468
BshNI GGYRCC 1 cut(s) 1153
BshVI ATCGAT 1 cut(s) 514
BsiEI CGRYCG 1 cut(s) 905
BsiSI CCGG 3 cut(s) 411, 459, 1157
BslFI GGGAC 2 cut(s) 676, 1292
BslI CCNNNNNNNGG 1 cut(s) 80
BsmAI GTCTC 4 cut(s) 46, 148, 871, 1131
BsmBI CGTCTC 1 cut(s) 1131
BsmFI GGGAC 2 cut(s) 676, 1292
BsmI GAATGC 1 cut(s) 989
BsnI GGCC 3 cut(s) 273, 383, 468
Bso31I GGTCTC 2 cut(s) 46, 148
Bsp119I TTCGAA 1 cut(s) 739
Bsp1286I GDGCHC 1 cut(s) 199
Bsp143I GATC 6 cut(s) 83, 232, 445, 511, 693, 931
Bsp19I CCATGG 2 cut(s) 36, 1211
BspACI CCGC 3 cut(s) 441, 469, 1310
BspANI GGCC 3 cut(s) 273, 383, 468
BspCNI CTCAG 3 cut(s) 208, 946, 1160
BspDI ATCGAT 1 cut(s) 514
BspFNI CGCG 1 cut(s) 785
BspHI TCATGA 2 cut(s) 1300, 1382
BspLI GGNNCC 1 cut(s) 1155
BspMI ACCTGC 1 cut(s) 1286
BspPI GGATC 4 cut(s) 91, 227, 519, 926
BspQI GCTCTTC 2 cut(s) 187, 1338
BspT104I TTCGAA 1 cut(s) 739
BspT107I GGYRCC 1 cut(s) 1153
BspTNI GGTCTC 2 cut(s) 46, 148
BsrFI RCCGGY 2 cut(s) 410, 1156
BsrI ACTGG 3 cut(s) 212, 680, 814
BssAI RCCGGY 2 cut(s) 410, 1156
BssECI CCNNGG 9 cut(s) 36, 128, 138, 274, 378, 459, 658, 1211, 1220
BssMI GATC 6 cut(s) 83, 232, 445, 511, 693, 931
BssT1I CCWWGG 3 cut(s) 36, 138, 1211
Bst2UI CCWGG 5 cut(s) 129, 276, 659, 1171, 1222
Bst4CI ACNGT 4 cut(s) 175, 667, 774, 1285
Bst6I CTCTTC 3 cut(s) 187, 303, 1338
BstAPI GCANNNNNTGC 2 cut(s) 299, 995
BstBI TTCGAA 1 cut(s) 739
BstC8I GCNNGC 1 cut(s) 1033
BstDEI CTNAG 4 cut(s) 216, 243, 954, 1147
BstDSI CCRYGG 2 cut(s) 36, 1211
BstF5I GGATG 2 cut(s) 469, 509
BstFNI CGCG 1 cut(s) 785
BstKTI GATC 6 cut(s) 86, 235, 448, 514, 696, 934
BstMAI GTCTC 4 cut(s) 46, 148, 871, 1131
BstMBI GATC 6 cut(s) 83, 232, 445, 511, 693, 931
BstMCI CGRYCG 1 cut(s) 905
BstMWI GCNNNNNNNGC 5 cut(s) 58, 279, 299, 995, 1318
BstNI CCWGG 5 cut(s) 129, 276, 659, 1171, 1222
BstSCI CCNGG 6 cut(s) 127, 274, 458, 657, 1169, 1220
BstUI CGCG 1 cut(s) 785
BstV1I GCAGC 4 cut(s) 208, 727, 1093, 1340
BstX2I RGATCY 2 cut(s) 232, 445
BstYI RGATCY 2 cut(s) 232, 445
Bsu15I ATCGAT 1 cut(s) 514
BsuI GTATCC 1 cut(s) 1227
BsuRI GGCC 3 cut(s) 273, 383, 468
BsuTUI ATCGAT 1 cut(s) 514
BtgI CCRYGG 2 cut(s) 36, 1211
BtgZI GCGATG 1 cut(s) 800
BtsCI GGATG 2 cut(s) 469, 509
BtsI GCAGTG 1 cut(s) 1042
BtsIMutI CAGTG 8 cut(s) 93, 171, 485, 770, 1042, 1138, 1155, 1290
BveI ACCTGC 1 cut(s) 1286
Cac8I GCNNGC 1 cut(s) 1033
CciI TCATGA 2 cut(s) 1300, 1382
Cfr10I RCCGGY 2 cut(s) 410, 1156
Cfr13I GGNCC 2 cut(s) 272, 317
ClaI ATCGAT 1 cut(s) 514
CsiI ACCWGGT 1 cut(s) 1169
Csp6I GTAC 5 cut(s) 352, 817, 939, 980, 1225
CviAII CATG 9 cut(s) 37, 80, 369, 691, 995, 1099, 1212, 1301, 1383
CviQI GTAC 5 cut(s) 352, 817, 939, 980, 1225
DdeI CTNAG 4 cut(s) 216, 243, 954, 1147
DpnI GATC 6 cut(s) 85, 234, 447, 513, 695, 933
DpnII GATC 6 cut(s) 83, 232, 445, 511, 693, 931
DraI TTTAAA 2 cut(s) 1047, 1345
EaeI YGGCCR 1 cut(s) 466
Eam1104I CTCTTC 3 cut(s) 187, 303, 1338
EarI CTCTTC 3 cut(s) 187, 303, 1338
Eco130I CCWWGG 3 cut(s) 36, 138, 1211
Eco24I GRGCYC 1 cut(s) 199
Eco31I GGTCTC 2 cut(s) 46, 148
Eco47I GGWCC 1 cut(s) 317
Eco57I CTGAAG 1 cut(s) 1319
EcoO109I RGGNCCY 1 cut(s) 272
EcoRII CCWGG 5 cut(s) 127, 274, 657, 1169, 1220
EcoT14I CCWWGG 3 cut(s) 36, 138, 1211
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 3 cut(s) 36, 138, 1211
Esp3I CGTCTC 1 cut(s) 1131
FaeI CATG 9 cut(s) 40, 83, 372, 694, 998, 1102, 1215, 1304, 1386
FaqI GGGAC 2 cut(s) 676, 1292
FatI CATG 9 cut(s) 36, 79, 368, 690, 994, 1098, 1211, 1300, 1382
FauI CCCGC 1 cut(s) 1317
FauNDI CATATG 1 cut(s) 295
FblI GTMKAC 1 cut(s) 872
Fnu4HI GCNGC 5 cut(s) 222, 469, 716, 1107, 1329
FokI GGATG 2 cut(s) 476, 516
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 5 cut(s) 222, 469, 716, 1107, 1329
GluI GCNGC 5 cut(s) 222, 469, 716, 1107, 1329
GsuI CTGGAG 1 cut(s) 390
HaeIII GGCC 3 cut(s) 273, 383, 468
HapII CCGG 3 cut(s) 411, 459, 1157
Hin1II CATG 9 cut(s) 40, 83, 372, 694, 998, 1102, 1215, 1304, 1386
HincII GTYRAC 2 cut(s) 1144, 1272
HindII GTYRAC 2 cut(s) 1144, 1272
HinfI GANTC 4 cut(s) 482, 682, 767, 1145
HpaII CCGG 3 cut(s) 411, 459, 1157
Hpy166II GTNNAC 6 cut(s) 873, 1026, 1144, 1227, 1261, 1272
Hpy188I TCNGA 7 cut(s) 307, 326, 503, 700, 747, 757, 850
Hpy188III TCNNGA 2 cut(s) 1301, 1383
Hpy8I GTNNAC 6 cut(s) 873, 1026, 1144, 1227, 1261, 1272
Hpy99I CGWCG 1 cut(s) 289
HpyAV CCTTC 2 cut(s) 1259, 1379
HpyCH4III ACNGT 4 cut(s) 175, 667, 774, 1285
HpyCH4IV ACGT 2 cut(s) 168, 1140
HpyCH4V TGCA 7 cut(s) 302, 613, 830, 840, 1035, 1184, 1280
HpyF10VI GCNNNNNNNGC 5 cut(s) 58, 279, 299, 995, 1318
HpyF3I CTNAG 4 cut(s) 216, 243, 954, 1147
HpySE526I ACGT 2 cut(s) 168, 1140
Hsp92II CATG 9 cut(s) 40, 83, 372, 694, 998, 1102, 1215, 1304, 1386
Kzo9I GATC 6 cut(s) 83, 232, 445, 511, 693, 931
LguI GCTCTTC 2 cut(s) 187, 1338
LmnI GCTCC 2 cut(s) 443, 1292
Lsp1109I GCAGC 4 cut(s) 208, 727, 1093, 1340
LweI GCATC 1 cut(s) 311
MabI ACCWGGT 1 cut(s) 1169
MaeII ACGT 2 cut(s) 168, 1140
MaeIII GTNAC 6 cut(s) 164, 169, 634, 667, 683, 1159
MalI GATC 6 cut(s) 85, 234, 447, 513, 695, 933
MboI GATC 6 cut(s) 83, 232, 445, 511, 693, 931
MboII GAAGA 7 cut(s) 107, 113, 204, 320, 760, 1073, 1325
MflI RGATCY 2 cut(s) 232, 445
MhlI GDGCHC 1 cut(s) 199
MluCI AATT 6 cut(s) 797, 1011, 1054, 1119, 1193, 1206
MlyI GAGTC 3 cut(s) 476, 691, 1139
MmeI TCCRAC 3 cut(s) 169, 489, 1229
MroXI GAANNNNTTC 2 cut(s) 362, 989
MseI TTAA 4 cut(s) 587, 1046, 1344, 1356
MslI CAYNNNNRTG 3 cut(s) 618, 676, 729
MspI CCGG 3 cut(s) 411, 459, 1157
MspR9I CCNGG 6 cut(s) 129, 276, 460, 659, 1171, 1222
Mva1269I GAATGC 1 cut(s) 989
MvaI CCWGG 5 cut(s) 129, 276, 659, 1171, 1222
MvnI CGCG 1 cut(s) 785
MwoI GCNNNNNNNGC 5 cut(s) 58, 279, 299, 995, 1318
NciI CCSGG 1 cut(s) 460
NcoI CCATGG 2 cut(s) 36, 1211
NdeI CATATG 1 cut(s) 295
NdeII GATC 6 cut(s) 83, 232, 445, 511, 693, 931
NlaIII CATG 9 cut(s) 40, 83, 372, 694, 998, 1102, 1215, 1304, 1386
NlaIV GGNNCC 1 cut(s) 1155
NmuCI GTSAC 4 cut(s) 169, 634, 683, 1159
NspV TTCGAA 1 cut(s) 739
OliI CACNNNNGTG 1 cut(s) 729
PagI TCATGA 2 cut(s) 1300, 1382
PciSI GCTCTTC 2 cut(s) 187, 1338
PcsI WCGNNNNNNNCGW 1 cut(s) 520
PctI GAATGC 1 cut(s) 989
PdmI GAANNNNTTC 2 cut(s) 362, 989
PfeI GAWTC 1 cut(s) 767
PflMI CCANNNNNTGG 1 cut(s) 80
PkrI GCNGC 5 cut(s) 223, 470, 717, 1108, 1330
PleI GAGTC 3 cut(s) 476, 690, 1139
PpsI GAGTC 3 cut(s) 476, 690, 1139
PshBI ATTAAT 1 cut(s) 587
PsiI TTATAA 1 cut(s) 1020
Psp6I CCWGG 5 cut(s) 127, 274, 657, 1169, 1220
PspGI CCWGG 5 cut(s) 127, 274, 657, 1169, 1220
PspN4I GGNNCC 1 cut(s) 1155
PspPI GGNCC 2 cut(s) 272, 317
PsuI RGATCY 2 cut(s) 232, 445
RsaI GTAC 5 cut(s) 353, 818, 940, 981, 1226
RsaNI GTAC 5 cut(s) 352, 817, 939, 980, 1225
RseI CAYNNNNRTG 3 cut(s) 618, 676, 729
SapI GCTCTTC 2 cut(s) 187, 1338
SaqAI TTAA 4 cut(s) 587, 1046, 1344, 1356
SatI GCNGC 5 cut(s) 222, 469, 716, 1107, 1329
Sau3AI GATC 6 cut(s) 83, 232, 445, 511, 693, 931
Sau96I GGNCC 2 cut(s) 272, 317
SchI GAGTC 3 cut(s) 476, 691, 1139
ScrFI CCNGG 6 cut(s) 129, 276, 460, 659, 1171, 1222
SduI GDGCHC 1 cut(s) 199
SexAI ACCWGGT 1 cut(s) 1169
SfaNI GCATC 1 cut(s) 311
SfuI TTCGAA 1 cut(s) 739
SinI GGWCC 1 cut(s) 317
SmiMI CAYNNNNRTG 3 cut(s) 618, 676, 729
SmlI CTYRAG 1 cut(s) 592
SmoI CTYRAG 1 cut(s) 592
Sse9I AATT 6 cut(s) 797, 1011, 1054, 1119, 1193, 1206
SsiI CCGC 3 cut(s) 441, 469, 1310
StyD4I CCNGG 6 cut(s) 127, 274, 458, 657, 1169, 1220
StyI CCWWGG 3 cut(s) 36, 138, 1211
TaaI ACNGT 4 cut(s) 175, 667, 774, 1285
TaiI ACGT 2 cut(s) 171, 1143
TaqI TCGA 5 cut(s) 514, 739, 901, 913, 1051
TaqII GACCGA 1 cut(s) 919
TasI AATT 6 cut(s) 797, 1011, 1054, 1119, 1193, 1206
TatI WGTACW 3 cut(s) 351, 816, 979
TauI GCSGC 1 cut(s) 471
TfiI GAWTC 1 cut(s) 767
Tru1I TTAA 4 cut(s) 587, 1046, 1344, 1356
Tru9I TTAA 4 cut(s) 587, 1046, 1344, 1356
TscAI CASTG 8 cut(s) 93, 178, 492, 777, 1042, 1138, 1155, 1290
TseFI GTSAC 4 cut(s) 169, 634, 683, 1159
TseI GCWGC 4 cut(s) 221, 715, 1106, 1328
Tsp45I GTSAC 4 cut(s) 169, 634, 683, 1159
TspDTI ATGAA 6 cut(s) 55, 108, 114, 484, 582, 1317
TspGWI ACGGA 1 cut(s) 956
TspRI CASTG 8 cut(s) 93, 178, 492, 777, 1042, 1138, 1155, 1290
Van91I CCANNNNNTGG 1 cut(s) 80
VpaK11BI GGWCC 1 cut(s) 317
VspI ATTAAT 1 cut(s) 587
XapI RAATTY 4 cut(s) 797, 1011, 1119, 1206
XcmI CCANNNNNNNNNTGG 1 cut(s) 1218
XmiI GTMKAC 1 cut(s) 872
XmnI GAANNNNTTC 2 cut(s) 362, 989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.