isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 882 |
| AatII | GACGTC | 1 cut(s) | 395 |
| AciI | CCGC | 6 cut(s) | 450, 462, 773, 818, 1100, 1308 |
| AclWI | GGATC | 7 cut(s) | 98, 581, 615, 628, 636, 763, 1462 |
| AcsI | RAATTY | 5 cut(s) | 334, 595, 765, 790, 859 |
| AcuI | CTGAAG | 2 cut(s) | 129, 1382 |
| AcyI | GRCGYC | 1 cut(s) | 392 |
| AfaI | GTAC | 2 cut(s) | 1410, 1437 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1001 |
| AgsI | TTSAA | 9 cut(s) | 193, 298, 329, 340, 600, 836, 1043, 1324, 1526 |
| AjnI | CCWGG | 3 cut(s) | 165, 925, 964 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 963, 995 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 960, 992 |
| AluBI | AGCT | 9 cut(s) | 73, 205, 413, 506, 611, 854, 1263, 1276, 1364 |
| AluI | AGCT | 9 cut(s) | 73, 205, 413, 506, 611, 854, 1263, 1276, 1364 |
| Alw26I | GTCTC | 1 cut(s) | 167 |
| AlwI | GGATC | 7 cut(s) | 98, 581, 615, 628, 636, 763, 1462 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 208, 1279, 1364 |
| AoxI | GGCC | 1 cut(s) | 428 |
| ApeKI | GCWGC | 6 cut(s) | 179, 182, 202, 205, 775, 1273 |
| ApoI | RAATTY | 5 cut(s) | 334, 595, 765, 790, 859 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 831, 975 |
| AspLEI | GCGC | 1 cut(s) | 1548 |
| AspS9I | GGNCC | 1 cut(s) | 923 |
| AsuC2I | CCSGG | 1 cut(s) | 555 |
| AsuHPI | GGTGA | 1 cut(s) | 332 |
| AvaII | GGWCC | 1 cut(s) | 923 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1488, 1521 |
| BamHI | GGATCC | 1 cut(s) | 620 |
| BauI | CACGAG | 1 cut(s) | 432 |
| BbsI | GAAGAC | 2 cut(s) | 375, 503 |
| BbvI | GCAGC | 6 cut(s) | 166, 169, 192, 214, 787, 1285 |
| BccI | CCATC | 5 cut(s) | 929, 1040, 1086, 1276, 1445 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1501, 1535 |
| BciT130I | CCWGG | 3 cut(s) | 167, 927, 966 |
| BclI | TGATCA | 3 cut(s) | 481, 1147, 1189 |
| BcnI | CCSGG | 1 cut(s) | 555 |
| BcoDI | GTCTC | 1 cut(s) | 167 |
| BfaI | CTAG | 4 cut(s) | 74, 227, 1332, 1502 |
| BfmI | CTRYAG | 1 cut(s) | 1365 |
| BglII | AGATCT | 1 cut(s) | 1328 |
| BisI | GCNGC | 7 cut(s) | 180, 183, 203, 206, 463, 776, 1274 |
| BlsI | GCNGC | 7 cut(s) | 181, 184, 204, 207, 464, 777, 1275 |
| Bme1390I | CCNGG | 4 cut(s) | 167, 555, 927, 966 |
| Bme18I | GGWCC | 1 cut(s) | 923 |
| BmgT120I | GGNCC | 1 cut(s) | 923 |
| BmiI | GGNNCC | 5 cut(s) | 622, 924, 1006, 1072, 1305 |
| BmrFI | CCNGG | 4 cut(s) | 167, 555, 927, 966 |
| BmsI | GCATC | 4 cut(s) | 865, 946, 1045, 1209 |
| BpiI | GAAGAC | 2 cut(s) | 375, 503 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1370, 1402 |
| BpmI | CTGGAG | 3 cut(s) | 149, 987, 1437 |
| BpuEI | CTTGAG | 2 cut(s) | 591, 744 |
| BpuMI | CCSGG | 1 cut(s) | 555 |
| Bsa29I | ATCGAT | 1 cut(s) | 933 |
| BsaBI | GATNNNNATC | 1 cut(s) | 9 |
| BsaHI | GRCGYC | 1 cut(s) | 392 |
| BsaJI | CCNNGG | 1 cut(s) | 624 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 960, 990, 1155, 1185 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1001 |
| Bse1I | ACTGG | 2 cut(s) | 995, 1542 |
| Bse3DI | GCAATG | 2 cut(s) | 497, 517 |
| Bse8I | GATNNNNATC | 1 cut(s) | 9 |
| BseBI | CCWGG | 3 cut(s) | 167, 927, 966 |
| BseCI | ATCGAT | 1 cut(s) | 933 |
| BseDI | CCNNGG | 1 cut(s) | 624 |
| BseGI | GGATG | 5 cut(s) | 10, 1078, 1108, 1150, 1462 |
| BseJI | GATNNNNATC | 1 cut(s) | 9 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1001 |
| BseMI | GCAATG | 2 cut(s) | 497, 517 |
| BseMII | CTCAG | 3 cut(s) | 405, 846, 1389 |
| BseNI | ACTGG | 2 cut(s) | 995, 1542 |
| BseRI | GAGGAG | 1 cut(s) | 164 |
| BseXI | GCAGC | 6 cut(s) | 166, 169, 192, 214, 787, 1285 |
| BsgI | GTGCAG | 1 cut(s) | 1292 |
| BshFI | GGCC | 1 cut(s) | 430 |
| BshVI | ATCGAT | 1 cut(s) | 933 |
| BsiSI | CCGG | 1 cut(s) | 554 |
| BslFI | GGGAC | 1 cut(s) | 936 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1001 |
| BsmAI | GTCTC | 1 cut(s) | 167 |
| BsmFI | GGGAC | 1 cut(s) | 936 |
| BsmI | GAATGC | 1 cut(s) | 1524 |
| BsnI | GGCC | 1 cut(s) | 430 |
| BspACI | CCGC | 6 cut(s) | 450, 462, 773, 818, 1100, 1308 |
| BspANI | GGCC | 1 cut(s) | 430 |
| BspCNI | CTCAG | 3 cut(s) | 406, 847, 1388 |
| BspDI | ATCGAT | 1 cut(s) | 933 |
| BspHI | TCATGA | 1 cut(s) | 387 |
| BspLI | GGNNCC | 5 cut(s) | 622, 924, 1006, 1072, 1305 |
| BspPI | GGATC | 7 cut(s) | 98, 581, 615, 628, 636, 763, 1462 |
| BsrDI | GCAATG | 2 cut(s) | 497, 517 |
| BsrI | ACTGG | 2 cut(s) | 995, 1542 |
| BssECI | CCNNGG | 1 cut(s) | 624 |
| BssNI | GRCGYC | 1 cut(s) | 392 |
| BssSI | CACGAG | 1 cut(s) | 432 |
| Bst2BI | CACGAG | 1 cut(s) | 432 |
| Bst2UI | CCWGG | 3 cut(s) | 167, 927, 966 |
| Bst4CI | ACNGT | 3 cut(s) | 1315, 1413, 1431 |
| Bst6I | CTCTTC | 4 cut(s) | 141, 888, 912, 1319 |
| BstACI | GRCGYC | 1 cut(s) | 392 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 125 |
| BstC8I | GCNNGC | 2 cut(s) | 508, 1261 |
| BstDEI | CTNAG | 5 cut(s) | 90, 414, 806, 855, 1375 |
| BstDSI | CCRYGG | 1 cut(s) | 624 |
| BstF5I | GGATG | 5 cut(s) | 10, 1078, 1108, 1150, 1462 |
| BstHHI | GCGC | 1 cut(s) | 1548 |
| BstMAI | GTCTC | 1 cut(s) | 167 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 125, 1498 |
| BstNI | CCWGG | 3 cut(s) | 167, 927, 966 |
| BstSCI | CCNGG | 4 cut(s) | 165, 553, 925, 964 |
| BstSFI | CTRYAG | 1 cut(s) | 1365 |
| BstV1I | GCAGC | 6 cut(s) | 166, 169, 192, 214, 787, 1285 |
| BstV2I | GAAGAC | 2 cut(s) | 375, 503 |
| BstX2I | RGATCY | 5 cut(s) | 103, 620, 755, 1328, 1454 |
| BstYI | RGATCY | 5 cut(s) | 103, 620, 755, 1328, 1454 |
| Bsu15I | ATCGAT | 1 cut(s) | 933 |
| BsuRI | GGCC | 1 cut(s) | 430 |
| BsuTUI | ATCGAT | 1 cut(s) | 933 |
| BtgI | CCRYGG | 1 cut(s) | 624 |
| BtsCI | GGATG | 5 cut(s) | 10, 1078, 1108, 1150, 1462 |
| BtsIMutI | CAGTG | 4 cut(s) | 717, 1002, 1031, 1535 |
| Cac8I | GCNNGC | 2 cut(s) | 508, 1261 |
| CaiI | CAGNNNCTG | 3 cut(s) | 208, 1279, 1364 |
| CciI | TCATGA | 1 cut(s) | 387 |
| CfoI | GCGC | 1 cut(s) | 1548 |
| Cfr13I | GGNCC | 1 cut(s) | 923 |
| ClaI | ATCGAT | 1 cut(s) | 933 |
| CseI | GACGC | 1 cut(s) | 51 |
| Csp6I | GTAC | 2 cut(s) | 1409, 1436 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1414, 1449 |
| CviAII | CATG | 7 cut(s) | 38, 350, 388, 479, 584, 868, 908 |
| CviQI | GTAC | 2 cut(s) | 1409, 1436 |
| DdeI | CTNAG | 5 cut(s) | 90, 414, 806, 855, 1375 |
| DraI | TTTAAA | 1 cut(s) | 357 |
| Eam1104I | CTCTTC | 4 cut(s) | 141, 888, 912, 1319 |
| EarI | CTCTTC | 4 cut(s) | 141, 888, 912, 1319 |
| Eco32I | GATATC | 1 cut(s) | 800 |
| Eco47I | GGWCC | 1 cut(s) | 923 |
| Eco57I | CTGAAG | 2 cut(s) | 129, 1382 |
| EcoO109I | RGGNCCY | 1 cut(s) | 923 |
| EcoRI | GAATTC | 1 cut(s) | 859 |
| EcoRII | CCWGG | 3 cut(s) | 165, 925, 964 |
| EcoRV | GATATC | 1 cut(s) | 800 |
| FaeI | CATG | 7 cut(s) | 41, 353, 391, 482, 587, 871, 911 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 309, 341 |
| FaqI | GGGAC | 1 cut(s) | 936 |
| FatI | CATG | 7 cut(s) | 37, 349, 387, 478, 583, 867, 907 |
| FauI | CCCGC | 3 cut(s) | 780, 811, 1315 |
| FbaI | TGATCA | 3 cut(s) | 481, 1147, 1189 |
| Fnu4HI | GCNGC | 7 cut(s) | 180, 183, 203, 206, 463, 776, 1274 |
| FokI | GGATG | 5 cut(s) | 17, 1065, 1115, 1157, 1449 |
| Fsp4HI | GCNGC | 7 cut(s) | 180, 183, 203, 206, 463, 776, 1274 |
| FspBI | CTAG | 4 cut(s) | 74, 227, 1332, 1502 |
| GlaI | GCGC | 1 cut(s) | 1547 |
| GluI | GCNGC | 7 cut(s) | 180, 183, 203, 206, 463, 776, 1274 |
| GsuI | CTGGAG | 3 cut(s) | 149, 987, 1437 |
| HaeIII | GGCC | 1 cut(s) | 430 |
| HapII | CCGG | 1 cut(s) | 554 |
| HgaI | GACGC | 1 cut(s) | 51 |
| HhaI | GCGC | 1 cut(s) | 1548 |
| Hin1I | GRCGYC | 1 cut(s) | 392 |
| Hin1II | CATG | 7 cut(s) | 41, 353, 391, 482, 587, 871, 911 |
| Hin6I | GCGC | 1 cut(s) | 1546 |
| HinP1I | GCGC | 1 cut(s) | 1546 |
| HindIII | AAGCTT | 3 cut(s) | 504, 609, 1261 |
| HinfI | GANTC | 7 cut(s) | 23, 154, 278, 832, 930, 1286, 1421 |
| HpaII | CCGG | 1 cut(s) | 554 |
| HphI | GGTGA | 1 cut(s) | 332 |
| Hpy188I | TCNGA | 9 cut(s) | 15, 22, 648, 744, 945, 1281, 1294, 1378, 1401 |
| Hpy188III | TCNNGA | 9 cut(s) | 107, 326, 388, 836, 1040, 1082, 1248, 1416, 1507 |
| Hpy99I | CGWCG | 1 cut(s) | 67 |
| HpyAV | CCTTC | 2 cut(s) | 187, 817 |
| HpyCH4III | ACNGT | 3 cut(s) | 1315, 1413, 1431 |
| HpyCH4IV | ACGT | 2 cut(s) | 287, 392 |
| HpyCH4V | TGCA | 7 cut(s) | 202, 478, 490, 510, 712, 1222, 1273 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 125, 1498 |
| HpyF3I | CTNAG | 5 cut(s) | 90, 414, 806, 855, 1375 |
| HpySE526I | ACGT | 2 cut(s) | 287, 392 |
| Hsp92I | GRCGYC | 1 cut(s) | 392 |
| Hsp92II | CATG | 7 cut(s) | 41, 353, 391, 482, 587, 871, 911 |
| HspAI | GCGC | 1 cut(s) | 1546 |
| Ksp22I | TGATCA | 3 cut(s) | 481, 1147, 1189 |
| LmnI | GCTCC | 1 cut(s) | 1070 |
| Lsp1109I | GCAGC | 6 cut(s) | 166, 169, 192, 214, 787, 1285 |
| LweI | GCATC | 4 cut(s) | 865, 946, 1045, 1209 |
| MaeI | CTAG | 4 cut(s) | 74, 227, 1332, 1502 |
| MaeII | ACGT | 2 cut(s) | 287, 392 |
| MaeIII | GTNAC | 5 cut(s) | 283, 361, 682, 1093, 1334 |
| MfeI | CAATTG | 1 cut(s) | 258 |
| MflI | RGATCY | 5 cut(s) | 103, 620, 755, 1328, 1454 |
| MluCI | AATT | 8 cut(s) | 174, 258, 334, 595, 765, 790, 859, 1166 |
| MnlI | CCTC | 9 cut(s) | 60, 142, 369, 441, 813, 913, 995, 1060, 1244 |
| MroXI | GAANNNNTTC | 2 cut(s) | 831, 975 |
| MseI | TTAA | 6 cut(s) | 95, 356, 735, 1266, 1344, 1564 |
| MslI | CAYNNNNRTG | 2 cut(s) | 477, 912 |
| MspA1I | CMGCKG | 2 cut(s) | 205, 462 |
| MspI | CCGG | 1 cut(s) | 554 |
| MspR9I | CCNGG | 4 cut(s) | 167, 555, 927, 966 |
| MunI | CAATTG | 1 cut(s) | 258 |
| Mva1269I | GAATGC | 1 cut(s) | 1524 |
| MvaI | CCWGG | 3 cut(s) | 167, 927, 966 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 125, 1498 |
| NciI | CCSGG | 1 cut(s) | 555 |
| NlaIII | CATG | 7 cut(s) | 41, 353, 391, 482, 587, 871, 911 |
| NlaIV | GGNNCC | 5 cut(s) | 622, 924, 1006, 1072, 1305 |
| PagI | TCATGA | 1 cut(s) | 387 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 692 |
| PctI | GAATGC | 1 cut(s) | 1524 |
| PdmI | GAANNNNTTC | 2 cut(s) | 831, 975 |
| PfeI | GAWTC | 7 cut(s) | 23, 154, 278, 832, 930, 1286, 1421 |
| PfoI | TCCNGGA | 1 cut(s) | 165 |
| PkrI | GCNGC | 7 cut(s) | 181, 184, 204, 207, 464, 777, 1275 |
| PpuMI | RGGWCCY | 1 cut(s) | 923 |
| PsiI | TTATAA | 1 cut(s) | 882 |
| Psp5II | RGGWCCY | 1 cut(s) | 923 |
| Psp6I | CCWGG | 3 cut(s) | 165, 925, 964 |
| PspGI | CCWGG | 3 cut(s) | 165, 925, 964 |
| PspN4I | GGNNCC | 5 cut(s) | 622, 924, 1006, 1072, 1305 |
| PspPI | GGNCC | 1 cut(s) | 923 |
| PspPPI | RGGWCCY | 1 cut(s) | 923 |
| PstNI | CAGNNNCTG | 3 cut(s) | 208, 1279, 1364 |
| PsuI | RGATCY | 5 cut(s) | 103, 620, 755, 1328, 1454 |
| PvuII | CAGCTG | 1 cut(s) | 205 |
| RsaI | GTAC | 2 cut(s) | 1410, 1437 |
| RsaNI | GTAC | 2 cut(s) | 1409, 1436 |
| RseI | CAYNNNNRTG | 2 cut(s) | 477, 912 |
| SaqAI | TTAA | 6 cut(s) | 95, 356, 735, 1266, 1344, 1564 |
| SatI | GCNGC | 7 cut(s) | 180, 183, 203, 206, 463, 776, 1274 |
| Sau96I | GGNCC | 1 cut(s) | 923 |
| ScrFI | CCNGG | 4 cut(s) | 167, 555, 927, 966 |
| SfaNI | GCATC | 4 cut(s) | 865, 946, 1045, 1209 |
| SfcI | CTRYAG | 1 cut(s) | 1365 |
| SinI | GGWCC | 1 cut(s) | 923 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 477, 912 |
| SmlI | CTYRAG | 2 cut(s) | 606, 759 |
| SmoI | CTYRAG | 2 cut(s) | 606, 759 |
| Sse9I | AATT | 8 cut(s) | 174, 258, 334, 595, 765, 790, 859, 1166 |
| SsiI | CCGC | 6 cut(s) | 450, 462, 773, 818, 1100, 1308 |
| SspMI | CTAG | 4 cut(s) | 74, 227, 1332, 1502 |
| StyD4I | CCNGG | 4 cut(s) | 165, 553, 925, 964 |
| TaaI | ACNGT | 3 cut(s) | 1315, 1413, 1431 |
| TaiI | ACGT | 2 cut(s) | 290, 395 |
| TaqI | TCGA | 5 cut(s) | 65, 250, 933, 1065, 1233 |
| TasI | AATT | 8 cut(s) | 174, 258, 334, 595, 765, 790, 859, 1166 |
| TatI | WGTACW | 1 cut(s) | 1435 |
| TauI | GCSGC | 1 cut(s) | 465 |
| TfiI | GAWTC | 7 cut(s) | 23, 154, 278, 832, 930, 1286, 1421 |
| Tru1I | TTAA | 6 cut(s) | 95, 356, 735, 1266, 1344, 1564 |
| Tru9I | TTAA | 6 cut(s) | 95, 356, 735, 1266, 1344, 1564 |
| TscAI | CASTG | 4 cut(s) | 724, 1002, 1031, 1542 |
| TseI | GCWGC | 6 cut(s) | 179, 182, 202, 205, 775, 1273 |
| TspDTI | ATGAA | 7 cut(s) | 146, 291, 376, 669, 906, 930, 1278 |
| TspGWI | ACGGA | 2 cut(s) | 641, 1475 |
| TspRI | CASTG | 4 cut(s) | 724, 1002, 1031, 1542 |
| VpaK11BI | GGWCC | 1 cut(s) | 923 |
| XapI | RAATTY | 5 cut(s) | 334, 595, 765, 790, 859 |
| XmnI | GAANNNNTTC | 2 cut(s) | 831, 975 |
| XspI | CTAG | 4 cut(s) | 74, 227, 1332, 1502 |
| ZraI | GACGTC | 1 cut(s) | 393 |