MD07G1077700.v1.1

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000817
Physical Location & Seq
Reverse (-)
7434762 .. 7445623
10862 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1077700.v1.1.491

Sequence Viewer

Length: 1590 bp
ATGTCTTTGAGTAAAAGTGCATCTCAGCAGTTGACGGATCGTGGGACACAGAATAGGAGCACTGATGTCTTCAACAGGCATGGCTCTGAAACACAGCTTGCTCCAAAGAATTTAAAAGATGACAATGGTGTCCATATCAAAGATCCAGAAGCTATGGTACTGGAACTTTATTCCCGAGCCAGAGCTCAGGAAGAGGAGATCCAATTTCTTCGTGGGCAAGTTACTGTTGCTTGTGTGAAGGAATTGCGCTTGCTGAATGAGAAGTATGCATTGGAGAGGAAATTTGCTGACTTACGGATGGCAATTGATGAGAAGCAGAACGAAGCCACTACTTCTGCATTAAATGAGTTGGCCCGCAGAAAAGGAGATCTTCAAGAAAATCTTAAACTAACTCATGAATTGAAGGCTGCAGACGATGAGAAGTATATCTTCATGTCATCCATGCTAGGGTTATTGGGTGAATATGGGATTTGGCCCCATGTCATAAATGCGTCTGCCATATCGAACAGTTTAAAGCATCTACATGATCAATTGCAGTGGAAGATTAGAACTTCCCATGATAAAATTAGACAATTAACCTCCGCAGTGGACAATCATGGTGAAAGTGAATCTCATGGTAAAGATAGCCATGGTTCTGCCATTTTGAATGGCCAATTTCCTGATAGATCCACAGTACTGATGGGACGGCAAGGCTTTGATCGTTATACTGATGACCAACATTTGGAGCCAACTGACACATTGCCGAAATATGTGACTGACATCGATGGGATGAAAATGCTAGTAAATAATGAAATTCCGCCTGAGTTCACAACCAATGCAGAGAGGGATATGGCTGGATTTATTAATAGAGATGATGCAAATGTGAGAGGCAGGAGTATGAACAATGGCACCTCATTTTCTCCTTACACCACTCAAGATGAGATTGCTCCCTCTGTTTCTGAAGTGGGCCCTGGAATAGAGAATTTTCAGATTATTGGTGAGGCTATTCCGGGAGGCAAACTTCTTGGCTGTGGATATCCAGTACGTGGGACCTCACTTTGTGTGTTTCAGTGGGTTCGTCATCTTCAGGATGGAACTAGGGAGGTCATTGAAGGTGCCACAAATCCAGAATATATTGTCACTGCTGATGATGTTGATAAGATAATTGCTGTTGACTGCATACCGATGGATGAACAAGGCCGTCAGGGGGAGCTAGTGAGGCATTTTGCTAATGATCAGAACAAAATTAGATGTGACCCAGACATGCAAATGGAGATTGACACACATATTTCTAAAGGACAAGCCAATTTTAGTGTTCTACTACTGATGGACTCTTCTGATGATTGGGAGCCAGCAACTCTGGTTCTGAGACGGTCAGGCTATCAAATCAGGATCAATAGTGCAGACGCTGTTTTATTTGAAGAAAAGTTCTCGAAGGAGTTATCGATCAAAGTTCCTTGTGGCTTCTCGACACAATTTGTGTTGACACGTTCTGATGGATCTTCTCATCCTTGTGCAACATACAGTATTCAGTTGCGTGATACTCTCGTGTTGACCATGAGAATACTCCAAAGCAAGGCACTGGATGACAGAAGGAAAGGAAGAGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SCAB-IgPH

Protein Analysis

530

Amino Acids

59.36

Weight (kDa)

5.42

Isoelectric Point (pI)

34.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IG_AIR9 PF23197 320 - 399 5.8e-11 AIR9 A9 domain
DUF7046 PF23080 437 - 526 4.2e-12 Domain of unknown function (DUF7046)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000817)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G03560
fragaria_vesca FvH4_7g08080 FvH4_7g08080 FvH4_7g08080 FvH4_7g08080 FvH4_7g08080 FvH4_7g08080
malus_domestica MD07G1077700.v1.1
prunus_persica Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1 Prupe.2G098900_v2.0.a1
pyrus_communis pycom07g06140
rosa_chinensis RchiOBHm_Chr1g0341241
rosa_laevigata RLG00000029074
rosa_multiflora Rmu_sc0004092.1_g000040 Rmu_sc0042871.1_g000001
rosa_roxburghii Rroxscaffold_4G00311890
rosa_rugosa Rorug01G0158600.1 Rorug01G0158700.1 Rorug01G0158800.1 Rorug01G0158900.1 Rorug01G0159000.1
rosa_samantha Rh1AG172900 Rh1BG141000 Rh1CG161000 Rh1DG173300
rosa_wichuraiana Rw1G014430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 128
AccB1I GGYRCC 2 cut(s) 887, 1094
AccB7I CCANNNNNTGG 2 cut(s) 721, 1025
AciI CCGC 3 cut(s) 355, 582, 797
AclWI GGATC 6 cut(s) 45, 137, 193, 660, 1379, 1486
AcoI YGGCCR 1 cut(s) 649
AcsI RAATTY 4 cut(s) 109, 281, 792, 961
AcuI CTGAAG 2 cut(s) 960, 1049
AdeI CACNNNGTG 1 cut(s) 1040
AfaI GTAC 3 cut(s) 159, 675, 1023
AfiI CCNNNNNNNGG 5 cut(s) 447, 721, 1025, 1186, 1555
AflIII ACRYGT 1 cut(s) 1466
AgsI TTSAA 6 cut(s) 73, 374, 403, 646, 1091, 1400
AjnI CCWGG 1 cut(s) 949
AjuI GAANNNNNNNTTGG 2 cut(s) 254, 286
AluBI AGCT 4 cut(s) 97, 152, 185, 1192
AluI AGCT 4 cut(s) 97, 152, 185, 1192
Alw21I GWGCWC 2 cut(s) 62, 187
Alw26I GTCTC 1 cut(s) 1342
AlwI GGATC 6 cut(s) 45, 137, 193, 660, 1379, 1486
AlwNI CAGNNNCTG 1 cut(s) 1388
Ama87I CYCGRG 1 cut(s) 174
AoxI GGCC 5 cut(s) 351, 473, 649, 946, 1177
ApaI GGGCCC 1 cut(s) 950
ApeKI GCWGC 1 cut(s) 407
ApoI RAATTY 4 cut(s) 109, 281, 792, 961
AseI ATTAAT 1 cut(s) 843
AspLEI GCGC 1 cut(s) 249
AspS9I GGNCC 5 cut(s) 352, 474, 946, 947, 1029
AsuC2I CCSGG 1 cut(s) 990
AsuHPI GGTGA 3 cut(s) 470, 611, 989
AvaI CYCGRG 1 cut(s) 174
AvaII GGWCC 1 cut(s) 1029
BaeGI GKGCMC 1 cut(s) 950
BaeI ACNNNNGTAYC 2 cut(s) 1512, 1545
BalI TGGCCA 1 cut(s) 651
BanI GGYRCC 2 cut(s) 887, 1094
BanII GRGCYC 2 cut(s) 187, 950
BarI GAAGNNNNNNTAC 2 cut(s) 141, 173
BauI CACGAG 1 cut(s) 1526
BbsI GAAGAC 1 cut(s) 61
Bbv12I GWGCWC 2 cut(s) 62, 187
BbvI GCAGC 1 cut(s) 394
BccI CCATC 7 cut(s) 292, 673, 758, 1064, 1159, 1300, 1469
BceAI ACGGC 2 cut(s) 701, 1164
BciT130I CCWGG 1 cut(s) 951
BclI TGATCA 2 cut(s) 526, 1213
BcnI CCSGG 1 cut(s) 990
BcoDI GTCTC 1 cut(s) 1342
BfaI CTAG 4 cut(s) 446, 779, 1077, 1193
BfmI CTRYAG 1 cut(s) 408
BglII AGATCT 1 cut(s) 367
BisI GCNGC 1 cut(s) 408
BlsI GCNGC 1 cut(s) 409
BmcAI AGTACT 1 cut(s) 675
Bme1390I CCNGG 2 cut(s) 951, 990
Bme18I GGWCC 1 cut(s) 1029
BmeT110I CYCGRG 1 cut(s) 174
BmgT120I GGNCC 5 cut(s) 352, 474, 946, 947, 1029
BmiI GGNNCC 7 cut(s) 476, 726, 889, 948, 1030, 1096, 1329
BmrFI CCNGG 2 cut(s) 951, 990
BmsI GCATC 3 cut(s) 29, 526, 844
BpiI GAAGAC 1 cut(s) 61
Bpu10I CCTNAGC 1 cut(s) 186
BpuEI CTTGAG 1 cut(s) 897
BpuMI CCSGG 1 cut(s) 990
Bsa29I ATCGAT 2 cut(s) 762, 1424
BsaAI YACGTR 1 cut(s) 1025
BsaJI CCNNGG 2 cut(s) 628, 949
Bsc4I CCNNNNNNNGG 5 cut(s) 447, 721, 1025, 1186, 1555
Bse1I ACTGG 3 cut(s) 165, 1019, 1566
Bse3DI GCAATG 1 cut(s) 737
BseBI CCWGG 1 cut(s) 951
BseCI ATCGAT 2 cut(s) 762, 1424
BseDI CCNNGG 2 cut(s) 628, 949
BseGI GGATG 7 cut(s) 303, 437, 774, 1075, 1174, 1486, 1570
BseLI CCNNNNNNNGG 5 cut(s) 447, 721, 1025, 1186, 1555
BseMI GCAATG 1 cut(s) 737
BseMII CTCAG 4 cut(s) 38, 200, 792, 1337
BseNI ACTGG 3 cut(s) 165, 1019, 1566
BseRI GAGGAG 1 cut(s) 209
BseSI GKGCMC 1 cut(s) 950
BseXI GCAGC 1 cut(s) 394
BsgI GTGCAG 1 cut(s) 1401
BshFI GGCC 5 cut(s) 353, 475, 651, 948, 1179
BshNI GGYRCC 2 cut(s) 887, 1094
BshVI ATCGAT 2 cut(s) 762, 1424
BsiHKAI GWGCWC 2 cut(s) 62, 187
BsiHKCI CYCGRG 1 cut(s) 174
BsiSI CCGG 1 cut(s) 989
BslFI GGGAC 3 cut(s) 58, 696, 1042
BslI CCNNNNNNNGG 5 cut(s) 447, 721, 1025, 1186, 1555
BsmAI GTCTC 1 cut(s) 1342
BsmBI CGTCTC 1 cut(s) 1342
BsmFI GGGAC 3 cut(s) 58, 696, 1042
BsnI GGCC 5 cut(s) 353, 475, 651, 948, 1179
BsoBI CYCGRG 1 cut(s) 174
Bsp120I GGGCCC 1 cut(s) 946
Bsp1286I GDGCHC 3 cut(s) 62, 187, 950
Bsp19I CCATGG 1 cut(s) 628
BspACI CCGC 3 cut(s) 355, 582, 797
BspANI GGCC 5 cut(s) 353, 475, 651, 948, 1179
BspCNI CTCAG 4 cut(s) 37, 199, 793, 1338
BspDI ATCGAT 2 cut(s) 762, 1424
BspHI TCATGA 1 cut(s) 394
BspLI GGNNCC 7 cut(s) 476, 726, 889, 948, 1030, 1096, 1329
BspMAI CTGCAG 1 cut(s) 412
BspPI GGATC 6 cut(s) 45, 137, 193, 660, 1379, 1486
BspQI GCTCTTC 1 cut(s) 1576
BspT107I GGYRCC 2 cut(s) 887, 1094
BsrDI GCAATG 1 cut(s) 737
BsrI ACTGG 3 cut(s) 165, 1019, 1566
BssECI CCNNGG 2 cut(s) 628, 949
BssSI CACGAG 1 cut(s) 1526
BssT1I CCWWGG 1 cut(s) 628
Bst2BI CACGAG 1 cut(s) 1526
Bst2UI CCWGG 1 cut(s) 951
Bst4CI ACNGT 5 cut(s) 226, 509, 673, 1353, 1505
Bst6I CTCTTC 3 cut(s) 186, 1318, 1576
BstBAI YACGTR 1 cut(s) 1025
BstC8I GCNNGC 4 cut(s) 99, 251, 355, 1332
BstDEI CTNAG 4 cut(s) 24, 186, 801, 1346
BstDSI CCRYGG 1 cut(s) 628
BstF5I GGATG 7 cut(s) 303, 437, 774, 1075, 1174, 1486, 1570
BstHHI GCGC 1 cut(s) 249
BstMAI GTCTC 1 cut(s) 1342
BstMWI GCNNNNNNNGC 1 cut(s) 1198
BstNI CCWGG 1 cut(s) 951
BstNSI RCATGY 1 cut(s) 1246
BstSCI CCNGG 2 cut(s) 949, 988
BstSFI CTRYAG 1 cut(s) 408
BstSLI GKGCMC 1 cut(s) 950
BstV1I GCAGC 1 cut(s) 394
BstV2I GAAGAC 1 cut(s) 61
BstX2I RGATCY 5 cut(s) 142, 198, 367, 665, 1478
BstYI RGATCY 5 cut(s) 142, 198, 367, 665, 1478
Bsu15I ATCGAT 2 cut(s) 762, 1424
BsuRI GGCC 5 cut(s) 353, 475, 651, 948, 1179
BsuTUI ATCGAT 2 cut(s) 762, 1424
BtgI CCRYGG 1 cut(s) 628
BtsCI GGATG 7 cut(s) 303, 437, 774, 1075, 1174, 1486, 1570
BtsI GCAGTG 3 cut(s) 542, 591, 1119
BtsIMutI CAGTG 6 cut(s) 60, 542, 591, 1055, 1119, 1559
Cac8I GCNNGC 4 cut(s) 99, 251, 355, 1332
CaiI CAGNNNCTG 1 cut(s) 1388
CciI TCATGA 1 cut(s) 394
CfoI GCGC 1 cut(s) 249
Cfr13I GGNCC 5 cut(s) 352, 474, 946, 947, 1029
ClaI ATCGAT 2 cut(s) 762, 1424
CseI GACGC 2 cut(s) 480, 1394
Csp6I GTAC 3 cut(s) 158, 674, 1022
CspCI CAANNNNNGTGG 2 cut(s) 518, 553
CviQI GTAC 3 cut(s) 158, 674, 1022
DdeI CTNAG 4 cut(s) 24, 186, 801, 1346
DraI TTTAAA 2 cut(s) 114, 513
DraIII CACNNNGTG 1 cut(s) 1040
DrdI GACNNNNNNGTC 1 cut(s) 128
DseDI GACNNNNNNGTC 1 cut(s) 128
EaeI YGGCCR 1 cut(s) 649
Eam1104I CTCTTC 3 cut(s) 186, 1318, 1576
EarI CTCTTC 3 cut(s) 186, 1318, 1576
EciI GGCGGA 1 cut(s) 786
Ecl136II GAGCTC 1 cut(s) 185
Eco130I CCWWGG 1 cut(s) 628
Eco24I GRGCYC 2 cut(s) 187, 950
Eco32I GATATC 1 cut(s) 1016
Eco47I GGWCC 1 cut(s) 1029
Eco53kI GAGCTC 1 cut(s) 185
Eco57I CTGAAG 2 cut(s) 960, 1049
Eco88I CYCGRG 1 cut(s) 174
EcoICRI GAGCTC 1 cut(s) 185
EcoO109I RGGNCCY 2 cut(s) 947, 1029
EcoRII CCWGG 1 cut(s) 949
EcoRV GATATC 1 cut(s) 1016
EcoT14I CCWWGG 1 cut(s) 628
EcoT22I ATGCAT 1 cut(s) 271
EcoT38I GRGCYC 2 cut(s) 187, 950
ErhI CCWWGG 1 cut(s) 628
Esp3I CGTCTC 1 cut(s) 1342
FalI AAGNNNNNCTT 6 cut(s) 354, 386, 366, 398, 413, 445
FaqI GGGAC 3 cut(s) 58, 696, 1042
FauI CCCGC 1 cut(s) 362
FbaI TGATCA 2 cut(s) 526, 1213
Fnu4HI GCNGC 1 cut(s) 408
FokI GGATG 7 cut(s) 310, 424, 781, 1082, 1181, 1473, 1577
FriOI GRGCYC 2 cut(s) 187, 950
Fsp4HI GCNGC 1 cut(s) 408
FspBI CTAG 4 cut(s) 446, 779, 1077, 1193
GlaI GCGC 1 cut(s) 248
GluI GCNGC 1 cut(s) 408
HaeIII GGCC 5 cut(s) 353, 475, 651, 948, 1179
HapII CCGG 1 cut(s) 989
HgaI GACGC 2 cut(s) 480, 1394
HhaI GCGC 1 cut(s) 249
Hin6I GCGC 1 cut(s) 247
HinP1I GCGC 1 cut(s) 247
HincII GTYRAC 4 cut(s) 33, 1153, 1464, 1533
HindII GTYRAC 4 cut(s) 33, 1153, 1464, 1533
HinfI GANTC 2 cut(s) 608, 1310
HpaII CCGG 1 cut(s) 989
HphI GGTGA 3 cut(s) 470, 611, 989
Hpy166II GTNNAC 6 cut(s) 33, 589, 807, 1153, 1464, 1533
Hpy188I TCNGA 7 cut(s) 88, 940, 969, 1218, 1318, 1347, 1474
Hpy8I GTNNAC 6 cut(s) 33, 589, 807, 1153, 1464, 1533
HpyAV CCTTC 5 cut(s) 232, 397, 1085, 1408, 1566
HpyCH4III ACNGT 5 cut(s) 226, 509, 673, 1353, 1505
HpyCH4IV ACGT 2 cut(s) 1024, 1468
HpyF10VI GCNNNNNNNGC 1 cut(s) 1198
HpyF3I CTNAG 4 cut(s) 24, 186, 801, 1346
HpySE526I ACGT 2 cut(s) 1024, 1468
HspAI GCGC 1 cut(s) 247
Ksp22I TGATCA 2 cut(s) 526, 1213
LguI GCTCTTC 1 cut(s) 1576
LmnI GCTCC 6 cut(s) 57, 106, 724, 931, 1189, 1327
Lsp1109I GCAGC 1 cut(s) 394
LweI GCATC 3 cut(s) 29, 526, 844
MaeI CTAG 4 cut(s) 446, 779, 1077, 1193
MaeII ACGT 2 cut(s) 1024, 1468
MaeIII GTNAC 4 cut(s) 220, 751, 1117, 1232
MfeI CAATTG 2 cut(s) 303, 530
MflI RGATCY 5 cut(s) 142, 198, 367, 665, 1478
MhlI GDGCHC 3 cut(s) 62, 187, 950
MlsI TGGCCA 1 cut(s) 651
MluNI TGGCCA 1 cut(s) 651
MlyI GAGTC 1 cut(s) 1304
Mox20I TGGCCA 1 cut(s) 651
Mph1103I ATGCAT 1 cut(s) 271
MscI TGGCCA 1 cut(s) 651
MseI TTAA 6 cut(s) 113, 341, 384, 512, 575, 843
MslI CAYNNNNRTG 4 cut(s) 522, 1163, 1247, 1491
Msp20I TGGCCA 1 cut(s) 651
MspI CCGG 1 cut(s) 989
MspR9I CCNGG 2 cut(s) 951, 990
MunI CAATTG 2 cut(s) 303, 530
MvaI CCWGG 1 cut(s) 951
MwoI GCNNNNNNNGC 1 cut(s) 1198
NciI CCSGG 1 cut(s) 990
NcoI CCATGG 1 cut(s) 628
NlaIV GGNNCC 7 cut(s) 476, 726, 889, 948, 1030, 1096, 1329
NmuCI GTSAC 3 cut(s) 751, 1117, 1232
NsiI ATGCAT 1 cut(s) 271
NspI RCATGY 1 cut(s) 1246
PagI TCATGA 1 cut(s) 394
PciSI GCTCTTC 1 cut(s) 1576
PfeI GAWTC 1 cut(s) 608
PflMI CCANNNNNTGG 2 cut(s) 721, 1025
PfoI TCCNGGA 1 cut(s) 988
PkrI GCNGC 1 cut(s) 409
PleI GAGTC 1 cut(s) 1304
PpsI GAGTC 1 cut(s) 1304
Ppu21I YACGTR 1 cut(s) 1025
PpuMI RGGWCCY 1 cut(s) 1029
PshBI ATTAAT 1 cut(s) 843
Psp124BI GAGCTC 1 cut(s) 187
Psp5II RGGWCCY 1 cut(s) 1029
Psp6I CCWGG 1 cut(s) 949
PspGI CCWGG 1 cut(s) 949
PspN4I GGNNCC 7 cut(s) 476, 726, 889, 948, 1030, 1096, 1329
PspOMI GGGCCC 1 cut(s) 946
PspPI GGNCC 5 cut(s) 352, 474, 946, 947, 1029
PspPPI RGGWCCY 1 cut(s) 1029
PstI CTGCAG 1 cut(s) 412
PstNI CAGNNNCTG 1 cut(s) 1388
PsuI RGATCY 5 cut(s) 142, 198, 367, 665, 1478
RsaI GTAC 3 cut(s) 159, 675, 1023
RsaNI GTAC 3 cut(s) 158, 674, 1022
RseI CAYNNNNRTG 4 cut(s) 522, 1163, 1247, 1491
SacI GAGCTC 1 cut(s) 187
SapI GCTCTTC 1 cut(s) 1576
SaqAI TTAA 6 cut(s) 113, 341, 384, 512, 575, 843
SatI GCNGC 1 cut(s) 408
Sau96I GGNCC 5 cut(s) 352, 474, 946, 947, 1029
ScaI AGTACT 1 cut(s) 675
SchI GAGTC 1 cut(s) 1304
ScrFI CCNGG 2 cut(s) 951, 990
SduI GDGCHC 3 cut(s) 62, 187, 950
SfaNI GCATC 3 cut(s) 29, 526, 844
SfcI CTRYAG 1 cut(s) 408
SinI GGWCC 1 cut(s) 1029
SmiMI CAYNNNNRTG 4 cut(s) 522, 1163, 1247, 1491
SmlI CTYRAG 1 cut(s) 912
SmoI CTYRAG 1 cut(s) 912
SsiI CCGC 3 cut(s) 355, 582, 797
SspMI CTAG 4 cut(s) 446, 779, 1077, 1193
SstI GAGCTC 1 cut(s) 187
StyD4I CCNGG 2 cut(s) 949, 988
StyI CCWWGG 1 cut(s) 628
TaaI ACNGT 5 cut(s) 226, 509, 673, 1353, 1505
TaiI ACGT 2 cut(s) 1027, 1471
TaqI TCGA 5 cut(s) 503, 762, 1412, 1424, 1448
TatI WGTACW 1 cut(s) 673
TfiI GAWTC 1 cut(s) 608
Tru1I TTAA 6 cut(s) 113, 341, 384, 512, 575, 843
Tru9I TTAA 6 cut(s) 113, 341, 384, 512, 575, 843
TscAI CASTG 6 cut(s) 67, 542, 591, 1055, 1126, 1566
TseFI GTSAC 3 cut(s) 751, 1117, 1232
TseI GCWGC 1 cut(s) 407
Tsp45I GTSAC 3 cut(s) 751, 1117, 1232
TspDTI ATGAA 6 cut(s) 411, 421, 785, 804, 893, 1185
TspGWI ACGGA 2 cut(s) 50, 310
TspRI CASTG 6 cut(s) 67, 542, 591, 1055, 1126, 1566
Van91I CCANNNNNTGG 2 cut(s) 721, 1025
VpaK11BI GGWCC 1 cut(s) 1029
VspI ATTAAT 1 cut(s) 843
XapI RAATTY 4 cut(s) 109, 281, 792, 961
XceI RCATGY 1 cut(s) 1246
XcmI CCANNNNNNNNNTGG 2 cut(s) 209, 676
XspI CTAG 4 cut(s) 446, 779, 1077, 1193
ZrmI AGTACT 1 cut(s) 675
Zsp2I ATGCAT 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.