AT3G04610

K homology RNA-binding domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
1250553 .. 1254984
4432 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G04610.2

Sequence Viewer

Length: 1734 bp
ATGGCTGAAGCTGAAGATCAGCAAAATTTCGTTGCACACAATGGAGATCAGGTACCAGATCAAGGGTCAGATGAGTTGCATAATGGGTTACCGTACCAGGTTCATGATGAGACCCTTGTTCACCAACCATACGAGGTTGAAGATCCGATTCTTGAACCTCAGCAGTACGAGGTACCAGATCCGACTCTTGAACCACAGCAGTACGAGGTACCAGATCAGACTCTTGAACCTCAGCAGTACGAGGTTGATGATCAGTTAGAGTATCATCAATACCAGTTGCAGGACCAGGCTAATGAAGATGTCCAAGATCATTCGCAAGATGACCTACAATATCAGCCACAAAATCAGGAGCAGTTTCAGTTACAAGACGAGGCTCATGATCAGGCTCAGTATCAGGCGCAAGGTGATGTACAAGATCACAATGGTGATGAAGTGCAAGATAAAGTAGAAGATGAGGAAGGAATTCCTGAGCATCTTGAGTCTCTACAGAAATCAGAGCCTGAAGAAGATGCGACAGTTGGAGGTGAGGAGAAGAGGTGGCCGGGATGGCCCGGAGAGACGGTATTCCGTATGCTGGTTCCTGCACAGAAAGTGGGTAGCATCATTGGTCGCAAAGGTGATGTCATTAAGAAAATAGTTGAGGAGACAAGGGCTCGAATAAAGATTCTCGATGGTCCTCCAGGCACAACAGAAAGAGCTGTTATGGTTTCTGGTAAAGAAGAGCCCGAATCATCTCTACCACCTTCTATGGATGGCCTTCTTAGAGTCCACATGCGGATAGTTGATGGTTTGGATGGTGAAGCTTCTCAAGCCCCTCCGCCTTCAAAGGTGTCAACAAGATTACTAGTCCCAGCATCTCAGGCTGGAAGTTTGATTGGAAAACAGGGAGGAACAGTTAAAGCTATTCAAGAAGCATCCGCTTGTATAGTCAGAGTTCTTGGATCAGAGGATTTACCTGTTTTTGCTCTTCAAGACGATAGGGTTGTTGAAGTTGTGGGGGAACCAACAAGTGTTCATAGAGCCTTGGAGCTGATTGCGTCACATCTCAGAAAGTTCTTGGTTGATCGTAGCATCATCCCATTCTTTGAAAATCAGATGCAAAAGCCAACTCGCCAAATGGACCATATGCCACCACCACACCAGTCATGGGGTCCTCCTCAAGGTCATGCCCCAAGTGTTGGTGGAGGAGGCTATGGTCACAACCCACCTCCATATATGCAACCACCTCCTAGACATGATAGTTACTATCCTCCTCCTGAGATGCGTCAACCTCCAATGGAGAAACAGCCTCATCAAGGTATATCTGCATATGGTAGAGAGCCTCCTATGAATGTGCACGTATCATCAGCCCCACCAATGGTCGCTCAGCAAGTTACGCAGCAAATGCAGATTCCACTGTCTTATGCTGATGCTGTAATTGGGACGTCGGGTTCAAACATAAGCTACACTAGACGTCTTAGTGGAGCAACAGTAACTATTCAGGAGACCAGGGGAGTACCTGGTGAAATGACTGTTGAGGTTAGCGGAACTGGCTCACAAGTCCAAACTGCCGTGCAGCTTATTCAGAACTTCATGGCTGAAGCTGGAGCGCCGGCACCAGCACAGCCTCAAACTGTAGCACCAGAGCAGCAAGGCTATAACCCATACGCAACACACGGCTCAGTTTACGCAGCGGCTCCAACAAACCCGCCTGGAGGATACGCTACGGATTACAGCTCAGGCTACGGTTACTGA

Protein Analysis

577

Amino Acids

63.4

Weight (kDa)

4.57

Isoelectric Point (pI)

51.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_1 PF00013 189 - 241 2.8e-14 KH domain
KH_1 PF00013 279 - 346 2.6e-15 KH domain
KH_1 PF00013 459 - 522 3.3e-11 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1427, 1456
Acc65I GGTACC 3 cut(s) 52, 172, 208
AccB1I GGYRCC 4 cut(s) 52, 172, 208, 1594
AccB7I CCANNNNNTGG 1 cut(s) 1178
AciI CCGC 6 cut(s) 775, 818, 918, 1524, 1673, 1688
AclWI GGATC 3 cut(s) 137, 173, 949
AcoI YGGCCR 1 cut(s) 539
AcsI RAATTY 2 cut(s) 25, 462
AcuI CTGAAG 4 cut(s) 27, 33, 522, 1599
AcyI GRCGYC 2 cut(s) 1424, 1453
AfaI GTAC 9 cut(s) 54, 95, 167, 174, 203, 210, 239, 411, 1497
AfiI CCNNNNNNNGG 9 cut(s) 62, 280, 574, 1147, 1160, 1178, 1295, 1357, 1694
AhlI ACTAGT 1 cut(s) 844
AjnI CCWGG 6 cut(s) 96, 285, 679, 1487, 1498, 1690
AleI CACNNNNGTG 1 cut(s) 423
AloI GAACNNNNNNTCC 2 cut(s) 1414, 1446
AluBI AGCT 9 cut(s) 11, 698, 803, 902, 1030, 1443, 1558, 1583, 1716
AluI AGCT 9 cut(s) 11, 698, 803, 902, 1030, 1443, 1558, 1583, 1716
Alw21I GWGCWC 1 cut(s) 1338
Alw26I GTCTC 5 cut(s) 104, 486, 551, 638, 1478
Alw44I GTGCAC 1 cut(s) 1334
AlwI GGATC 3 cut(s) 137, 173, 949
AlwNI CAGNNNCTG 1 cut(s) 500
AoxI GGCC 3 cut(s) 539, 548, 754
ApaLI GTGCAC 1 cut(s) 1334
ApeKI GCWGC 4 cut(s) 1378, 1555, 1627, 1670
ApoI RAATTY 2 cut(s) 25, 462
ArsI GACNNNNNNTTYG 2 cut(s) 606, 638
Asp700I GAANNNNTTC 1 cut(s) 462
Asp718I GGTACC 3 cut(s) 52, 172, 208
AspLEI GCGC 2 cut(s) 400, 1591
AspS9I GGNCC 5 cut(s) 283, 549, 674, 1120, 1151
AsuC2I CCSGG 2 cut(s) 543, 552
AsuHPI GGTGA 7 cut(s) 113, 416, 437, 536, 629, 809, 1514
AvaII GGWCC 4 cut(s) 283, 674, 1120, 1151
BaeGI GKGCMC 1 cut(s) 1338
BanI GGYRCC 4 cut(s) 52, 172, 208, 1594
BanII GRGCYC 2 cut(s) 655, 726
Bbv12I GWGCWC 1 cut(s) 1338
BbvCI CCTCAGC 2 cut(s) 159, 231
BbvI GCAGC 4 cut(s) 1390, 1567, 1639, 1682
BccI CCATC 5 cut(s) 540, 665, 746, 779, 788
BceAI ACGGC 2 cut(s) 1535, 1672
BciT130I CCWGG 6 cut(s) 98, 287, 681, 1489, 1500, 1692
BciVI GTATCC 1 cut(s) 1691
BclI TGATCA 2 cut(s) 250, 379
BcnI CCSGG 2 cut(s) 543, 552
BcoDI GTCTC 5 cut(s) 104, 486, 551, 638, 1478
BcuI ACTAGT 1 cut(s) 844
BfaI CTAG 3 cut(s) 845, 1230, 1449
BfmI CTRYAG 2 cut(s) 485, 1614
BfoI RGCGCY 1 cut(s) 1592
BfuI GTATCC 1 cut(s) 1691
BglI GCCNNNNNGGC 1 cut(s) 547
BisI GCNGC 5 cut(s) 1379, 1556, 1628, 1671, 1674
BlpI GCTNAGC 1 cut(s) 1365
BlsI GCNGC 5 cut(s) 1380, 1557, 1629, 1672, 1675
Bme1390I CCNGG 8 cut(s) 98, 287, 543, 552, 681, 1489, 1500, 1692
Bme18I GGWCC 4 cut(s) 283, 674, 1120, 1151
BmgT120I GGNCC 5 cut(s) 283, 549, 674, 1120, 1151
BmiI GGNNCC 8 cut(s) 54, 174, 210, 579, 1002, 1152, 1596, 1677
BmrFI CCNGG 8 cut(s) 98, 287, 543, 552, 681, 1489, 1500, 1692
BmsI GCATC 9 cut(s) 481, 499, 609, 863, 923, 1080, 1086, 1251, 1399
BpmI CTGGAG 3 cut(s) 663, 1605, 1713
Bpu10I CCTNAGC 4 cut(s) 159, 231, 468, 1717
Bpu1102I GCTNAGC 1 cut(s) 1365
BpuEI CTTGAG 3 cut(s) 497, 792, 1143
BpuMI CCSGG 2 cut(s) 543, 552
BsaAI YACGTR 1 cut(s) 1339
BsaHI GRCGYC 2 cut(s) 1424, 1453
BsaI GGTCTC 2 cut(s) 104, 1478
BsaJI CCNNGG 2 cut(s) 1023, 1488
Bsc4I CCNNNNNNNGG 9 cut(s) 62, 280, 574, 1147, 1160, 1178, 1295, 1357, 1694
Bse118I RCCGGY 1 cut(s) 1591
Bse1I ACTGG 3 cut(s) 274, 1141, 1534
BseBI CCWGG 6 cut(s) 98, 287, 681, 1489, 1500, 1692
BseDI CCNNGG 2 cut(s) 1023, 1488
BseGI GGATG 5 cut(s) 551, 757, 799, 914, 1074
BseLI CCNNNNNNNGG 9 cut(s) 62, 280, 574, 1147, 1160, 1178, 1295, 1357, 1694
BseNI ACTGG 3 cut(s) 274, 1141, 1534
BseRI GAGGAG 5 cut(s) 542, 656, 1146, 1200, 1242
BseSI GKGCMC 1 cut(s) 1338
BseXI GCAGC 4 cut(s) 1390, 1567, 1639, 1682
BseYI CCCAGC 1 cut(s) 850
BsgI GTGCAG 2 cut(s) 567, 1574
BshFI GGCC 3 cut(s) 541, 550, 756
BshNI GGYRCC 4 cut(s) 52, 172, 208, 1594
BsiHKAI GWGCWC 1 cut(s) 1338
BsiSI CCGG 3 cut(s) 542, 552, 1592
BslFI GGGAC 2 cut(s) 833, 1435
BslI CCNNNNNNNGG 9 cut(s) 62, 280, 574, 1147, 1160, 1178, 1295, 1357, 1694
BsmAI GTCTC 5 cut(s) 104, 486, 551, 638, 1478
BsmBI CGTCTC 1 cut(s) 551
BsmFI GGGAC 2 cut(s) 833, 1435
BsnI GGCC 3 cut(s) 541, 550, 756
Bso31I GGTCTC 2 cut(s) 104, 1478
Bsp1286I GDGCHC 3 cut(s) 655, 726, 1338
Bsp1407I TGTACA 1 cut(s) 409
Bsp1720I GCTNAGC 1 cut(s) 1365
BspACI CCGC 6 cut(s) 775, 818, 918, 1524, 1673, 1688
BspANI GGCC 3 cut(s) 541, 550, 756
BspHI TCATGA 2 cut(s) 103, 376
BspLI GGNNCC 8 cut(s) 54, 174, 210, 579, 1002, 1152, 1596, 1677
BspPI GGATC 3 cut(s) 137, 173, 949
BspQI GCTCTTC 2 cut(s) 714, 972
BspT107I GGYRCC 4 cut(s) 52, 172, 208, 1594
BspTNI GGTCTC 2 cut(s) 104, 1478
BsrFI RCCGGY 1 cut(s) 1591
BsrGI TGTACA 1 cut(s) 409
BsrI ACTGG 3 cut(s) 274, 1141, 1534
BssAI RCCGGY 1 cut(s) 1591
BssECI CCNNGG 2 cut(s) 1023, 1488
BssNI GRCGYC 2 cut(s) 1424, 1453
BssT1I CCWWGG 1 cut(s) 1023
Bst2UI CCWGG 6 cut(s) 98, 287, 681, 1489, 1500, 1692
Bst4CI ACNGT 9 cut(s) 93, 517, 562, 895, 1398, 1471, 1513, 1615, 1727
Bst6I CTCTTC 3 cut(s) 527, 714, 972
BstACI GRCGYC 2 cut(s) 1424, 1453
BstAPI GCANNNNNTGC 1 cut(s) 1384
BstAUI TGTACA 1 cut(s) 409
BstBAI YACGTR 1 cut(s) 1339
BstC8I GCNNGC 1 cut(s) 1593
BstEII GGTNACC 1 cut(s) 87
BstENI CCTNNNNNAGG 2 cut(s) 1158, 1293
BstF5I GGATG 5 cut(s) 551, 757, 799, 914, 1074
BstH2I RGCGCY 1 cut(s) 1592
BstHHI GCGC 2 cut(s) 400, 1591
BstMAI GTCTC 5 cut(s) 104, 486, 551, 638, 1478
BstMWI GCNNNNNNNGC 6 cut(s) 547, 809, 860, 1375, 1384, 1530
BstNI CCWGG 6 cut(s) 98, 287, 681, 1489, 1500, 1692
BstNSI RCATGY 1 cut(s) 775
BstPI GGTNACC 1 cut(s) 87
BstSCI CCNGG 8 cut(s) 96, 285, 541, 550, 679, 1487, 1498, 1690
BstSFI CTRYAG 2 cut(s) 485, 1614
BstSLI GKGCMC 1 cut(s) 1338
BstV1I GCAGC 4 cut(s) 1390, 1567, 1639, 1682
BstX2I RGATCY 2 cut(s) 142, 178
BstYI RGATCY 2 cut(s) 142, 178
BsuI GTATCC 1 cut(s) 1691
BsuRI GGCC 3 cut(s) 541, 550, 756
BtsCI GGATG 5 cut(s) 551, 757, 799, 914, 1074
BtsIMutI CAGTG 1 cut(s) 1394
Cac8I GCNNGC 1 cut(s) 1593
CaiI CAGNNNCTG 1 cut(s) 500
CciI TCATGA 2 cut(s) 103, 376
CfoI GCGC 2 cut(s) 400, 1591
Cfr10I RCCGGY 1 cut(s) 1591
Cfr13I GGNCC 5 cut(s) 283, 549, 674, 1120, 1151
CseI GACGC 2 cut(s) 1026, 1253
CsiI ACCWGGT 2 cut(s) 96, 1498
Csp6I GTAC 9 cut(s) 53, 94, 166, 173, 202, 209, 238, 410, 1496
CviAII CATG 7 cut(s) 104, 377, 772, 1146, 1166, 1235, 1573
CviQI GTAC 9 cut(s) 53, 94, 166, 173, 202, 209, 238, 410, 1496
EaeI YGGCCR 1 cut(s) 539
Eam1104I CTCTTC 3 cut(s) 527, 714, 972
EarI CTCTTC 3 cut(s) 527, 714, 972
EciI GGCGGA 1 cut(s) 807
Eco130I CCWWGG 1 cut(s) 1023
Eco24I GRGCYC 2 cut(s) 655, 726
Eco31I GGTCTC 2 cut(s) 104, 1478
Eco47I GGWCC 4 cut(s) 283, 674, 1120, 1151
Eco57I CTGAAG 4 cut(s) 27, 33, 522, 1599
Eco91I GGTNACC 1 cut(s) 87
EcoNI CCTNNNNNAGG 2 cut(s) 1158, 1293
EcoO109I RGGNCCY 1 cut(s) 1151
EcoO65I GGTNACC 1 cut(s) 87
EcoRI GAATTC 1 cut(s) 462
EcoRII CCWGG 6 cut(s) 96, 285, 679, 1487, 1498, 1690
EcoT14I CCWWGG 1 cut(s) 1023
EcoT38I GRGCYC 2 cut(s) 655, 726
ErhI CCWWGG 1 cut(s) 1023
Esp3I CGTCTC 1 cut(s) 551
FaeI CATG 7 cut(s) 107, 380, 775, 1149, 1169, 1238, 1576
FaqI GGGAC 2 cut(s) 833, 1435
FatI CATG 7 cut(s) 103, 376, 771, 1145, 1165, 1234, 1572
FauI CCCGC 1 cut(s) 1695
FauNDI CATATG 2 cut(s) 1125, 1309
FbaI TGATCA 2 cut(s) 250, 379
Fnu4HI GCNGC 5 cut(s) 1379, 1556, 1628, 1671, 1674
FokI GGATG 5 cut(s) 558, 764, 806, 901, 1061
FriOI GRGCYC 2 cut(s) 655, 726
Fsp4HI GCNGC 5 cut(s) 1379, 1556, 1628, 1671, 1674
FspBI CTAG 3 cut(s) 845, 1230, 1449
GlaI GCGC 2 cut(s) 399, 1590
GluI GCNGC 5 cut(s) 1379, 1556, 1628, 1671, 1674
GsaI CCCAGC 1 cut(s) 854
GsuI CTGGAG 3 cut(s) 663, 1605, 1713
HaeII RGCGCY 1 cut(s) 1592
HaeIII GGCC 3 cut(s) 541, 550, 756
HapII CCGG 3 cut(s) 542, 552, 1592
HgaI GACGC 2 cut(s) 1026, 1253
HhaI GCGC 2 cut(s) 400, 1591
Hin1I GRCGYC 2 cut(s) 1424, 1453
Hin1II CATG 7 cut(s) 107, 380, 775, 1149, 1169, 1238, 1576
Hin6I GCGC 2 cut(s) 398, 1589
HinP1I GCGC 2 cut(s) 398, 1589
HincII GTYRAC 2 cut(s) 834, 1268
HindII GTYRAC 2 cut(s) 834, 1268
HindIII AAGCTT 1 cut(s) 801
HinfI GANTC 8 cut(s) 148, 184, 220, 479, 664, 728, 765, 1390
HpaII CCGG 3 cut(s) 542, 552, 1592
HphI GGTGA 7 cut(s) 113, 416, 437, 536, 629, 809, 1514
Hpy166II GTNNAC 6 cut(s) 121, 769, 834, 1268, 1336, 1666
Hpy8I GTNNAC 6 cut(s) 121, 769, 834, 1268, 1336, 1666
Hpy99I CGWCG 1 cut(s) 1429
HpyAV CCTTC 4 cut(s) 452, 753, 767, 831
HpyCH4III ACNGT 9 cut(s) 93, 517, 562, 895, 1398, 1471, 1513, 1615, 1727
HpyCH4IV ACGT 3 cut(s) 1338, 1424, 1453
HpyF10VI GCNNNNNNNGC 6 cut(s) 547, 809, 860, 1375, 1384, 1530
HpySE526I ACGT 3 cut(s) 1338, 1424, 1453
Hsp92I GRCGYC 2 cut(s) 1424, 1453
Hsp92II CATG 7 cut(s) 107, 380, 775, 1149, 1169, 1238, 1576
HspAI GCGC 2 cut(s) 398, 1589
KpnI GGTACC 3 cut(s) 56, 176, 212
KroI GCCGGC 1 cut(s) 1591
KroNI GCCGGC 1 cut(s) 1593
Ksp22I TGATCA 2 cut(s) 250, 379
LguI GCTCTTC 2 cut(s) 714, 972
LmnI GCTCC 5 cut(s) 349, 1027, 1463, 1586, 1681
Lsp1109I GCAGC 4 cut(s) 1390, 1567, 1639, 1682
LweI GCATC 9 cut(s) 481, 499, 609, 863, 923, 1080, 1086, 1251, 1399
MabI ACCWGGT 2 cut(s) 96, 1498
MaeI CTAG 3 cut(s) 845, 1230, 1449
MaeII ACGT 3 cut(s) 1338, 1424, 1453
MaeIII GTNAC 8 cut(s) 87, 360, 1038, 1196, 1241, 1372, 1471, 1727
MboII GAAGA 9 cut(s) 26, 152, 308, 461, 515, 518, 544, 731, 959
MflI RGATCY 2 cut(s) 142, 178
MhlI GDGCHC 3 cut(s) 655, 726, 1338
MluCI AATT 3 cut(s) 25, 462, 1416
MlyI GAGTC 4 cut(s) 178, 214, 488, 774
MmeI TCCRAC 3 cut(s) 206, 499, 1703
MroNI GCCGGC 1 cut(s) 1591
MroXI GAANNNNTTC 1 cut(s) 462
MseI TTAA 2 cut(s) 627, 897
MslI CAYNNNNRTG 1 cut(s) 423
MspA1I CMGCKG 1 cut(s) 1673
MspI CCGG 3 cut(s) 542, 552, 1592
MspR9I CCNGG 8 cut(s) 98, 287, 543, 552, 681, 1489, 1500, 1692
MvaI CCWGG 6 cut(s) 98, 287, 681, 1489, 1500, 1692
MwoI GCNNNNNNNGC 6 cut(s) 547, 809, 860, 1375, 1384, 1530
NaeI GCCGGC 1 cut(s) 1593
NciI CCSGG 2 cut(s) 543, 552
NdeI CATATG 2 cut(s) 1125, 1309
NgoMIV GCCGGC 1 cut(s) 1591
NlaIII CATG 7 cut(s) 107, 380, 775, 1149, 1169, 1238, 1576
NlaIV GGNNCC 8 cut(s) 54, 174, 210, 579, 1002, 1152, 1596, 1677
NmuCI GTSAC 2 cut(s) 1038, 1196
NspI RCATGY 1 cut(s) 775
OliI CACNNNNGTG 1 cut(s) 423
PagI TCATGA 2 cut(s) 103, 376
PciSI GCTCTTC 2 cut(s) 714, 972
PdiI GCCGGC 1 cut(s) 1593
PdmI GAANNNNTTC 1 cut(s) 462
PfeI GAWTC 4 cut(s) 148, 664, 728, 1390
PflMI CCANNNNNTGG 1 cut(s) 1178
PkrI GCNGC 5 cut(s) 1380, 1557, 1629, 1672, 1675
PleI GAGTC 4 cut(s) 178, 214, 487, 773
PpsI GAGTC 4 cut(s) 178, 214, 487, 773
Ppu21I YACGTR 1 cut(s) 1339
PpuMI RGGWCCY 1 cut(s) 1151
Psp5II RGGWCCY 1 cut(s) 1151
Psp6I CCWGG 6 cut(s) 96, 285, 679, 1487, 1498, 1690
PspEI GGTNACC 1 cut(s) 87
PspFI CCCAGC 1 cut(s) 850
PspGI CCWGG 6 cut(s) 96, 285, 679, 1487, 1498, 1690
PspN4I GGNNCC 8 cut(s) 54, 174, 210, 579, 1002, 1152, 1596, 1677
PspPI GGNCC 5 cut(s) 283, 549, 674, 1120, 1151
PspPPI RGGWCCY 1 cut(s) 1151
PstNI CAGNNNCTG 1 cut(s) 500
PsuI RGATCY 2 cut(s) 142, 178
RsaI GTAC 9 cut(s) 54, 95, 167, 174, 203, 210, 239, 411, 1497
RsaNI GTAC 9 cut(s) 53, 94, 166, 173, 202, 209, 238, 410, 1496
RseI CAYNNNNRTG 1 cut(s) 423
SapI GCTCTTC 2 cut(s) 714, 972
SaqAI TTAA 2 cut(s) 627, 897
SatI GCNGC 5 cut(s) 1379, 1556, 1628, 1671, 1674
Sau96I GGNCC 5 cut(s) 283, 549, 674, 1120, 1151
SchI GAGTC 4 cut(s) 178, 214, 488, 774
ScrFI CCNGG 8 cut(s) 98, 287, 543, 552, 681, 1489, 1500, 1692
SduI GDGCHC 3 cut(s) 655, 726, 1338
SexAI ACCWGGT 2 cut(s) 96, 1498
SfaNI GCATC 9 cut(s) 481, 499, 609, 863, 923, 1080, 1086, 1251, 1399
SfcI CTRYAG 2 cut(s) 485, 1614
SfiI GGCCNNNNNGGCC 1 cut(s) 547
SinI GGWCC 4 cut(s) 283, 674, 1120, 1151
SmiMI CAYNNNNRTG 1 cut(s) 423
SmlI CTYRAG 3 cut(s) 476, 807, 1158
SmoI CTYRAG 3 cut(s) 476, 807, 1158
SpeI ACTAGT 1 cut(s) 844
Sse9I AATT 3 cut(s) 25, 462, 1416
SsiI CCGC 6 cut(s) 775, 818, 918, 1524, 1673, 1688
SspMI CTAG 3 cut(s) 845, 1230, 1449
StyD4I CCNGG 8 cut(s) 96, 285, 541, 550, 679, 1487, 1498, 1690
StyI CCWWGG 1 cut(s) 1023
TaaI ACNGT 9 cut(s) 93, 517, 562, 895, 1398, 1471, 1513, 1615, 1727
TaiI ACGT 3 cut(s) 1341, 1427, 1456
TaqI TCGA 2 cut(s) 655, 669
TasI AATT 3 cut(s) 25, 462, 1416
TatI WGTACW 1 cut(s) 409
TauI GCSGC 1 cut(s) 1676
TfiI GAWTC 4 cut(s) 148, 664, 728, 1390
Tru1I TTAA 2 cut(s) 627, 897
Tru9I TTAA 2 cut(s) 627, 897
TscAI CASTG 1 cut(s) 1401
TseFI GTSAC 2 cut(s) 1038, 1196
TseI GCWGC 4 cut(s) 1378, 1555, 1627, 1670
Tsp45I GTSAC 2 cut(s) 1038, 1196
TspDTI ATGAA 6 cut(s) 92, 309, 444, 1004, 1343, 1561
TspGWI ACGGA 2 cut(s) 557, 1721
TspRI CASTG 1 cut(s) 1401
Van91I CCANNNNNTGG 1 cut(s) 1178
VneI GTGCAC 1 cut(s) 1334
VpaK11BI GGWCC 4 cut(s) 283, 674, 1120, 1151
XagI CCTNNNNNAGG 2 cut(s) 1158, 1293
XapI RAATTY 2 cut(s) 25, 462
XceI RCATGY 1 cut(s) 775
XcmI CCANNNNNNNNNTGG 1 cut(s) 1143
XmnI GAANNNNTTC 1 cut(s) 462
XspI CTAG 3 cut(s) 845, 1230, 1449
ZraI GACGTC 2 cut(s) 1425, 1454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.