Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0007921

Physical Location & Seq

Genomic Coordinates Reverse (-)

48656553 .. 48661919

Gene Structure 5367 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00428170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGCAGCAAAGGCTGAAGAAATGGAAGCAGAGGCTCGGGCCATGGCACAGGCTCATGCAATGGCAGCAGAGGCTCAAGCCATACTTGAGGCACAGGCTGAGGCAGAGGGACAGGTTGAGCCGGTTGGGCAGCTACAAGGACAATTACAAGAGGAGGAGTTACTGCCTGAACATGACCAAGAGCGTCATGAAGATGCTGGGGGTGTTGAAGGTGAGAAGAAGTGGCCTGGATGGCCTGGTGAGAGTGTTTTCCGGATGTTGGTTCCTGCTCAGAAGGTGGGTAGTATAATTGGACGCAAAGGGGAGTTCATTAAAAAAATAGTGGAGGAGACGCGAGCTCGCATTAAAATCCTTGATGGTCCTCCAGGAACAACTGAAAGAGCTGTAATGGTTTCCGGCAAGGAGGAGCCTGATTCTTCCCTCCCTCCTGCAATTGATGGCCTTTTGAGAGTTCATGCACGCATTGTTGATGGTTTGGATGTTGATTCTTCTCAAGCTCCCCCAGGCATGGGTGGTAAAGTTTCGACAAGGATGCTGGTTCCAGCCTCACAGGCTGGTAGCTTGATTGGAAAACAGGGAGGAACTGTTAAATCCATTCAAGAGGCATCTAACTGTATAGTTAGAGTTCTTGGATCAGAGGACCTACCGGTTTTTGCCCTTTCAGATGACAGAGTTGTTGAAGTAGTGGGCGAGCCAGTTGGTGTCCACAAAGGAATTGAACTAATTGCATCTCACCTCAGGAAGTTTTTAGTTGACCGCAGTATAATTCCAGTATTTGAAATGCATATGCAGGCAAATCCTCCCATGGAGCACATTCCCCCTCATCAATCATGGGGTCCACCTCAAGGTATTCCACACAATGCTGGTGGGGGTCCTGGATATGGGCCACCTAATCCTCAGTACATGCCATCTTCTCGGCAGCAATTTGACAACTACTATCCACCAGCTGACTTGCCCCCGCCTATGGAGAAACAGCCGCATCATGGCATATCAGCTTATGGACGAGAAGCTCCTATGGGTGTTCATACATCATCAAATGCTCAATCAGCACCATCAATGGTCTCACAGCTCACACATCAAATGCAAATTCCATTGTCATATGCTGATGCTGTTATTGGCACAGCTGGTGCAAGTATAAGCTATATTCGTCGGGCTAGTGGGGCTACTGTTACAATACAAGAGACGAGGGGTGTTCCTGGGGAGATGACTGTTGAAATAAGTGGAAGTGCTTCCCAAAATTTCATGGTCGAGGCTGGAGCACCACAACAGCCACAAGCTGCTGCCCCTGTGGATCAGGGTTATAATTCCTATCCAGCTCATGGTTCCGTGTATGCATCTCCCCTTCCAACCAAGGTCACCAAGGCCATACTGGCGGCTATGGCTCAGTCTATGGCCAACACTATGGTTACTAGCTCAATAGAGAATATCAATTTGGTTTGCAAAGTTGAGACTAGTTGTAATTGTTGTGAACTTGGTAATCACCAAGTAGTTTCTCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009909 GO:0009911 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0097159 GO:1901363 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

499

Amino Acids

53.02

Weight (kDa)

5.36

Isoelectric Point (pI)

50.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	84 - 136	1.3e-14	KH domain
KH_1	PF00013	176 - 243	1e-15	KH domain
KH_1	PF00013	358 - 412	8e-09	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007921)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04610 AT3G04610 AT3G04610 AT3G04610
fragaria_vesca	FvH4_6g02580 FvH4_6g02580 FvH4_6g02580 FvH4_6g02580
malus_domestica	MD04G1227000.v1.1 MD12G1244000.v1.1
prunus_persica	Prupe.6G345700_v2.0.a1 Prupe.6G345700_v2.0.a1
pyrus_communis	pycom04g20030 pycom12g22300
rosa_chinensis	RchiOBHm_Chr3g0450491
rosa_laevigata	RLG00000025727
rosa_multiflora	Rmu_sc0005951.1_g000006
rosa_roxburghii	Rroxscaffold_6G00428170
rosa_rugosa	Rorug02G0628000
rosa_samantha	Rh3AG028700 Rh3BG029200 Rh3CG028000 Rh3DG028900
rosa_wichuraiana	Rw3G002210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1302
AccB7I	CCANNNNNTGG	1 cut(s)	1319
AccII	CGCG	1 cut(s)	334
AccIII	TCCGGA	1 cut(s)	252
AciI	CCGC	4 cut(s)	757, 959, 977, 1373
AclWI	GGATC	2 cut(s)	640, 1299
AcoI	YGGCCR	1 cut(s)	1392
AcsI	RAATTY	2 cut(s)	1086, 1237
AcuI	CTGAAG	1 cut(s)	36
AfaI	GTAC	1 cut(s)	902
AfiI	CCNNNNNNNGG	8 cut(s)	259, 508, 509, 845, 881, 964, 983, 1319
AgeI	ACCGGT	1 cut(s)	646
AgsI	TTSAA	6 cut(s)	209, 599, 680, 719, 779, 1214
AhlI	ACTAGT	1 cut(s)	1451
AjnI	CCWGG	6 cut(s)	226, 235, 364, 502, 874, 1195
AjuI	GAANNNNNNNTTGG	2 cut(s)	1415, 1447
Alw21I	GWGCWC	3 cut(s)	340, 813, 1261
Alw26I	GTCTC	4 cut(s)	323, 1066, 1175, 1442
AlwI	GGATC	2 cut(s)	640, 1299
Ama87I	CYCGRG	1 cut(s)	36
Aor13HI	TCCGGA	1 cut(s)	252
AoxI	GGCC	7 cut(s)	39, 224, 233, 439, 884, 1362, 1392
ApeKI	GCWGC	6 cut(s)	5, 65, 130, 919, 1277, 1280
ApoI	RAATTY	2 cut(s)	1086, 1237
AsiGI	ACCGGT	1 cut(s)	646
Asp700I	GAANNNNTTC	1 cut(s)	1228
AspS9I	GGNCC	6 cut(s)	39, 359, 640, 836, 872, 884
AsuHPI	GGTGA	5 cut(s)	224, 251, 725, 1348, 1472
AvaI	CYCGRG	1 cut(s)	36
AvaII	GGWCC	4 cut(s)	359, 640, 836, 872
AxyI	CCTNAGG	1 cut(s)	737
BalI	TGGCCA	1 cut(s)	1394
BanII	GRGCYC	1 cut(s)	340
Bbv12I	GWGCWC	3 cut(s)	340, 813, 1261
BbvCI	CCTCAGC	1 cut(s)	99
BbvI	GCAGC	6 cut(s)	17, 77, 142, 931, 1264, 1267
BccI	CCATC	6 cut(s)	225, 350, 431, 464, 916, 1060
BcgI	CGANNNNNNTGC	2 cut(s)	514, 548
BciT130I	CCWGG	6 cut(s)	228, 237, 366, 504, 876, 1197
BcoDI	GTCTC	4 cut(s)	323, 1066, 1175, 1442
BcuI	ACTAGT	1 cut(s)	1451
BfaI	CTAG	3 cut(s)	1155, 1410, 1452
BglI	GCCNNNNNGGC	4 cut(s)	127, 232, 551, 1370
BisI	GCNGC	8 cut(s)	6, 66, 131, 920, 977, 1278, 1281, 1374
BlsI	GCNGC	8 cut(s)	7, 67, 132, 921, 978, 1279, 1282, 1375
Bme1390I	CCNGG	6 cut(s)	228, 237, 366, 504, 876, 1197
Bme18I	GGWCC	4 cut(s)	359, 640, 836, 872
BmeT110I	CYCGRG	1 cut(s)	36
BmgT120I	GGNCC	6 cut(s)	39, 359, 640, 836, 872, 884
BmiI	GGNNCC	6 cut(s)	264, 408, 540, 837, 873, 1324
BmrFI	CCNGG	6 cut(s)	228, 237, 366, 504, 876, 1197
BmsI	GCATC	7 cut(s)	184, 522, 614, 737, 988, 1096, 1343
BpmI	CTGGAG	2 cut(s)	348, 1275
Bpu10I	CCTNAGC	1 cut(s)	99
BpuEI	CTTGAG	4 cut(s)	60, 107, 477, 828
BsaI	GGTCTC	1 cut(s)	1066
BsaJI	CCNNGG	6 cut(s)	42, 502, 804, 1196, 1350, 1359
BsaWI	WCCGGW	2 cut(s)	252, 646
BsaXI	ACNNNNNCTCC	2 cut(s)	570, 600
Bsc4I	CCNNNNNNNGG	8 cut(s)	259, 508, 509, 845, 881, 964, 983, 1319
Bse118I	RCCGGY	2 cut(s)	121, 646
Bse1I	ACTGG	3 cut(s)	695, 770, 1374
Bse21I	CCTNAGG	1 cut(s)	737
Bse3DI	GCAATG	1 cut(s)	66
BseAI	TCCGGA	1 cut(s)	252
BseBI	CCWGG	6 cut(s)	228, 237, 366, 504, 876, 1197
BseDI	CCNNGG	6 cut(s)	42, 502, 804, 1196, 1350, 1359
BseGI	GGATG	4 cut(s)	236, 261, 484, 537
BseLI	CCNNNNNNNGG	8 cut(s)	259, 508, 509, 845, 881, 964, 983, 1319
BseMI	GCAATG	1 cut(s)	66
BseMII	CTCAG	5 cut(s)	90, 284, 751, 911, 1397
BseNI	ACTGG	3 cut(s)	695, 770, 1374
BseRI	GAGGAG	4 cut(s)	167, 170, 341, 419
BseXI	GCAGC	6 cut(s)	17, 77, 142, 931, 1264, 1267
BseYI	CCCAGC	1 cut(s)	197
Bsh1236I	CGCG	1 cut(s)	334
BshFI	GGCC	7 cut(s)	41, 226, 235, 441, 886, 1364, 1394
BshTI	ACCGGT	1 cut(s)	646
BsiHKAI	GWGCWC	3 cut(s)	340, 813, 1261
BsiHKCI	CYCGRG	1 cut(s)	36
BsiSI	CCGG	4 cut(s)	122, 253, 396, 647
BslFI	GGGAC	1 cut(s)	123
BslI	CCNNNNNNNGG	8 cut(s)	259, 508, 509, 845, 881, 964, 983, 1319
BsmAI	GTCTC	4 cut(s)	323, 1066, 1175, 1442
BsmBI	CGTCTC	2 cut(s)	323, 1175
BsmFI	GGGAC	1 cut(s)	123
BsnI	GGCC	7 cut(s)	41, 226, 235, 441, 886, 1364, 1394
Bso31I	GGTCTC	1 cut(s)	1066
BsoBI	CYCGRG	1 cut(s)	36
Bsp1286I	GDGCHC	3 cut(s)	340, 813, 1261
Bsp13I	TCCGGA	1 cut(s)	252
Bsp143I	GATC	2 cut(s)	632, 1291
Bsp19I	CCATGG	2 cut(s)	42, 804
BspACI	CCGC	4 cut(s)	757, 959, 977, 1373
BspANI	GGCC	7 cut(s)	41, 226, 235, 441, 886, 1364, 1394
BspCNI	CTCAG	5 cut(s)	91, 283, 750, 910, 1396
BspEI	TCCGGA	1 cut(s)	252
BspFNI	CGCG	1 cut(s)	334
BspHI	TCATGA	1 cut(s)	187
BspLI	GGNNCC	6 cut(s)	264, 408, 540, 837, 873, 1324
BspPI	GGATC	2 cut(s)	640, 1299
BspTNI	GGTCTC	1 cut(s)	1066
BsrDI	GCAATG	1 cut(s)	66
BsrFI	RCCGGY	2 cut(s)	121, 646
BsrI	ACTGG	3 cut(s)	695, 770, 1374
BssAI	RCCGGY	2 cut(s)	121, 646
BssECI	CCNNGG	6 cut(s)	42, 502, 804, 1196, 1350, 1359
BssMI	GATC	2 cut(s)	632, 1291
BssT1I	CCWWGG	4 cut(s)	42, 804, 1350, 1359
Bst2UI	CCWGG	6 cut(s)	228, 237, 366, 504, 876, 1197
Bst4CI	ACNGT	4 cut(s)	586, 614, 1168, 1210
BstC8I	GCNNGC	5 cut(s)	336, 340, 460, 692, 792
BstDEI	CTNAG	5 cut(s)	99, 270, 737, 897, 1383
BstDSI	CCRYGG	2 cut(s)	42, 804
BstEII	GGTNACC	1 cut(s)	1354
BstF5I	GGATG	4 cut(s)	236, 261, 484, 537
BstFNI	CGCG	1 cut(s)	334
BstKTI	GATC	2 cut(s)	635, 1294
BstMAI	GTCTC	4 cut(s)	323, 1066, 1175, 1442
BstMBI	GATC	2 cut(s)	632, 1291
BstNI	CCWGG	6 cut(s)	228, 237, 366, 504, 876, 1197
BstNSI	RCATGY	1 cut(s)	907
BstPI	GGTNACC	1 cut(s)	1354
BstSCI	CCNGG	6 cut(s)	226, 235, 364, 502, 874, 1195
BstUI	CGCG	1 cut(s)	334
BstV1I	GCAGC	6 cut(s)	17, 77, 142, 931, 1264, 1267
BstXI	CCANNNNNNTGG	1 cut(s)	1402
Bsu36I	CCTNAGG	1 cut(s)	737
BsuRI	GGCC	7 cut(s)	41, 226, 235, 441, 886, 1364, 1394
BtgI	CCRYGG	2 cut(s)	42, 804
BtsCI	GGATG	4 cut(s)	236, 261, 484, 537
Cac8I	GCNNGC	5 cut(s)	336, 340, 460, 692, 792
CciI	TCATGA	1 cut(s)	187
Cfr10I	RCCGGY	2 cut(s)	121, 646
Cfr13I	GGNCC	6 cut(s)	39, 359, 640, 836, 872, 884
CseI	GACGC	3 cut(s)	173, 303, 340
Csp6I	GTAC	1 cut(s)	901
CspAI	ACCGGT	1 cut(s)	646
CspCI	CAANNNNNGTGG	2 cut(s)	847, 882
CviQI	GTAC	1 cut(s)	901
DdeI	CTNAG	5 cut(s)	99, 270, 737, 897, 1383
DpnI	GATC	2 cut(s)	634, 1293
DpnII	GATC	2 cut(s)	632, 1291
EaeI	YGGCCR	1 cut(s)	1392
Ecl136II	GAGCTC	1 cut(s)	338
Eco130I	CCWWGG	4 cut(s)	42, 804, 1350, 1359
Eco24I	GRGCYC	1 cut(s)	340
Eco31I	GGTCTC	1 cut(s)	1066
Eco47I	GGWCC	4 cut(s)	359, 640, 836, 872
Eco53kI	GAGCTC	1 cut(s)	338
Eco57I	CTGAAG	1 cut(s)	36
Eco81I	CCTNAGG	1 cut(s)	737
Eco88I	CYCGRG	1 cut(s)	36
Eco91I	GGTNACC	1 cut(s)	1354
EcoICRI	GAGCTC	1 cut(s)	338
EcoO109I	RGGNCCY	2 cut(s)	640, 872
EcoO65I	GGTNACC	1 cut(s)	1354
EcoRII	CCWGG	6 cut(s)	226, 235, 364, 502, 874, 1195
EcoT14I	CCWWGG	4 cut(s)	42, 804, 1350, 1359
EcoT22I	ATGCAT	2 cut(s)	786, 1336
EcoT38I	GRGCYC	1 cut(s)	340
ErhI	CCWWGG	4 cut(s)	42, 804, 1350, 1359
Esp3I	CGTCTC	2 cut(s)	323, 1175
FalI	AAGNNNNNCTT	2 cut(s)	69, 101
FaqI	GGGAC	1 cut(s)	123
FauI	CCCGC	1 cut(s)	966
FauNDI	CATATG	2 cut(s)	786, 1099
Fnu4HI	GCNGC	8 cut(s)	6, 66, 131, 920, 977, 1278, 1281, 1374
FokI	GGATG	4 cut(s)	243, 268, 491, 544
FriOI	GRGCYC	1 cut(s)	340
Fsp4HI	GCNGC	8 cut(s)	6, 66, 131, 920, 977, 1278, 1281, 1374
FspBI	CTAG	3 cut(s)	1155, 1410, 1452
GluI	GCNGC	8 cut(s)	6, 66, 131, 920, 977, 1278, 1281, 1374
GsaI	CCCAGC	1 cut(s)	201
GsuI	CTGGAG	2 cut(s)	348, 1275
HaeIII	GGCC	7 cut(s)	41, 226, 235, 441, 886, 1364, 1394
HapII	CCGG	4 cut(s)	122, 253, 396, 647
HgaI	GACGC	3 cut(s)	173, 303, 340
HincII	GTYRAC	1 cut(s)	754
HindII	GTYRAC	1 cut(s)	754
HinfI	GANTC	2 cut(s)	413, 485
HpaII	CCGG	4 cut(s)	122, 253, 396, 647
HphI	GGTGA	5 cut(s)	224, 251, 725, 1348, 1472
Hpy166II	GTNNAC	4 cut(s)	706, 754, 839, 1469
Hpy188I	TCNGA	3 cut(s)	273, 637, 664
Hpy188III	TCNNGA	5 cut(s)	188, 253, 599, 739, 1494
Hpy8I	GTNNAC	4 cut(s)	706, 754, 839, 1469
Hpy99I	CGWCG	1 cut(s)	1152
HpyAV	CCTTC	3 cut(s)	203, 268, 1352
HpyCH4III	ACNGT	4 cut(s)	586, 614, 1168, 1210
HpyF3I	CTNAG	5 cut(s)	99, 270, 737, 897, 1383
Kpn2I	TCCGGA	1 cut(s)	252
Kzo9I	GATC	2 cut(s)	632, 1291
LmnI	GCTCC	5 cut(s)	406, 502, 808, 1015, 1256
Lsp1109I	GCAGC	6 cut(s)	17, 77, 142, 931, 1264, 1267
LweI	GCATC	7 cut(s)	184, 522, 614, 737, 988, 1096, 1343
MaeI	CTAG	3 cut(s)	1155, 1410, 1452
MaeIII	GTNAC	4 cut(s)	159, 1168, 1354, 1405
MalI	GATC	2 cut(s)	634, 1293
MboI	GATC	2 cut(s)	632, 1291
MboII	GAAGA	6 cut(s)	29, 203, 229, 408, 480, 903
MfeI	CAATTG	1 cut(s)	432
MhlI	GDGCHC	3 cut(s)	340, 813, 1261
MlsI	TGGCCA	1 cut(s)	1394
MluNI	TGGCCA	1 cut(s)	1394
MmeI	TCCRAC	1 cut(s)	1370
Mox20I	TGGCCA	1 cut(s)	1394
Mph1103I	ATGCAT	2 cut(s)	786, 1336
MroI	TCCGGA	1 cut(s)	252
MroXI	GAANNNNTTC	1 cut(s)	1228
MscI	TGGCCA	1 cut(s)	1394
MseI	TTAA	3 cut(s)	312, 345, 588
MslI	CAYNNNNRTG	1 cut(s)	192
Msp20I	TGGCCA	1 cut(s)	1394
MspA1I	CMGCKG	2 cut(s)	947, 1124
MspI	CCGG	4 cut(s)	122, 253, 396, 647
MspR9I	CCNGG	6 cut(s)	228, 237, 366, 504, 876, 1197
MunI	CAATTG	1 cut(s)	432
MvaI	CCWGG	6 cut(s)	228, 237, 366, 504, 876, 1197
MvnI	CGCG	1 cut(s)	334
NcoI	CCATGG	2 cut(s)	42, 804
NdeI	CATATG	2 cut(s)	786, 1099
NdeII	GATC	2 cut(s)	632, 1291
NlaIV	GGNNCC	6 cut(s)	264, 408, 540, 837, 873, 1324
NmeAIII	GCCGAG	1 cut(s)	895
NmuCI	GTSAC	1 cut(s)	1354
NsiI	ATGCAT	2 cut(s)	786, 1336
NspI	RCATGY	1 cut(s)	907
PagI	TCATGA	1 cut(s)	187
PdmI	GAANNNNTTC	1 cut(s)	1228
PfeI	GAWTC	2 cut(s)	413, 485
PflMI	CCANNNNNTGG	1 cut(s)	1319
PfoI	TCCNGGA	2 cut(s)	364, 874
PinAI	ACCGGT	1 cut(s)	646
PkrI	GCNGC	8 cut(s)	7, 67, 132, 921, 978, 1279, 1282, 1375
PpuMI	RGGWCCY	2 cut(s)	640, 872
PsiI	TTATAA	1 cut(s)	1302
Psp124BI	GAGCTC	1 cut(s)	340
Psp5II	RGGWCCY	2 cut(s)	640, 872
Psp6I	CCWGG	6 cut(s)	226, 235, 364, 502, 874, 1195
PspEI	GGTNACC	1 cut(s)	1354
PspFI	CCCAGC	1 cut(s)	197
PspGI	CCWGG	6 cut(s)	226, 235, 364, 502, 874, 1195
PspN4I	GGNNCC	6 cut(s)	264, 408, 540, 837, 873, 1324
PspPI	GGNCC	6 cut(s)	39, 359, 640, 836, 872, 884
PspPPI	RGGWCCY	2 cut(s)	640, 872
PvuII	CAGCTG	2 cut(s)	947, 1124
RsaI	GTAC	1 cut(s)	902
RsaNI	GTAC	1 cut(s)	901
RseI	CAYNNNNRTG	1 cut(s)	192
SacI	GAGCTC	1 cut(s)	340
SaqAI	TTAA	3 cut(s)	312, 345, 588
SatI	GCNGC	8 cut(s)	6, 66, 131, 920, 977, 1278, 1281, 1374
Sau3AI	GATC	2 cut(s)	632, 1291
Sau96I	GGNCC	6 cut(s)	39, 359, 640, 836, 872, 884
ScrFI	CCNGG	6 cut(s)	228, 237, 366, 504, 876, 1197
SduI	GDGCHC	3 cut(s)	340, 813, 1261
SfaNI	GCATC	7 cut(s)	184, 522, 614, 737, 988, 1096, 1343
SfiI	GGCCNNNNNGGCC	1 cut(s)	232
SinI	GGWCC	4 cut(s)	359, 640, 836, 872
SmiMI	CAYNNNNRTG	1 cut(s)	192
SmlI	CTYRAG	4 cut(s)	75, 86, 492, 843
SmoI	CTYRAG	4 cut(s)	75, 86, 492, 843
SpeI	ACTAGT	1 cut(s)	1451
SsiI	CCGC	4 cut(s)	757, 959, 977, 1373
SspMI	CTAG	3 cut(s)	1155, 1410, 1452
SstI	GAGCTC	1 cut(s)	340
StyD4I	CCNGG	6 cut(s)	226, 235, 364, 502, 874, 1195
StyI	CCWWGG	4 cut(s)	42, 804, 1350, 1359
TaaI	ACNGT	4 cut(s)	586, 614, 1168, 1210
TaqI	TCGA	3 cut(s)	524, 1248, 1495
TatI	WGTACW	1 cut(s)	900
TauI	GCSGC	2 cut(s)	979, 1376
TfiI	GAWTC	2 cut(s)	413, 485
Tru1I	TTAA	3 cut(s)	312, 345, 588
Tru9I	TTAA	3 cut(s)	312, 345, 588
TseFI	GTSAC	1 cut(s)	1354
TseI	GCWGC	6 cut(s)	5, 65, 130, 919, 1277, 1280
Tsp45I	GTSAC	1 cut(s)	1354
TspDTI	ATGAA	5 cut(s)	204, 298, 443, 1013, 1231
TspGWI	ACGGA	1 cut(s)	1315
Van91I	CCANNNNNTGG	1 cut(s)	1319
VpaK11BI	GGWCC	4 cut(s)	359, 640, 836, 872
XapI	RAATTY	2 cut(s)	1086, 1237
XceI	RCATGY	1 cut(s)	907
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1366
XmnI	GAANNNNTTC	1 cut(s)	1228
XspI	CTAG	3 cut(s)	1155, 1410, 1452
Zsp2I	ATGCAT	2 cut(s)	786, 1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.