Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0007921

Physical Location & Seq

Genomic Coordinates Reverse (-)

1949619 .. 1954025

Gene Structure 4407 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G002210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGCTGATGAAAATCCAAGCTTTGGTGTACATGATGGGGATCACGTACCCGAGTCTGAGGTTGTGACTCAGCCTGAGACTGAGAATGCAGAGGCCGAGGCTGAGGCTGAGGCGCTAGCCATGGCGGAGGCTCAGGCAATGACAGGAGAGGCACAAGTTATCGCAGACGCTCAGGCAATGGCAGCAGTGGCTCAAGAAATGGAAGCAGACGCTCGGGCCATGGCACAGGCTCATGCAATGGCAGCAGAGGCTCAAGCCATACTTGAGGCACAGGCTGAGGCAGAGGGACAGGTTGAGCCAGTTGGGCAGCTACAAGGACAATTACAAGAGGAGGAGTTACTTCCTGAACATGACCAAGAGCGTCATGAAGATACTGTGGGTGTTGAAGGTGAGAAGAAGTGGCCTGGATGGCCTGGTGAGAGTGTTTTCCGGATGTTGGTTCCTGCTCAGAAGGTGGGTAGTATAATTGGACGCAAAGGGGAGTTCATTAAAAAAATAGTGGAGGAGACGCGAGCTCGCATTAAAATCCTTGATGGTCCTCCAGGAACAACTGAAAGAGCTGTAATGGTTTCCGGCAAGGAGGAGCCTGATTCTTCCCTCCCTCCTGCAATTGATGGCCTTTTGAGAGTTCATGCACGCATTGTTGATGGTTTGGATGCTGATTCTTCTCAAGCTCCCCCAGGCATGGGTGGTAAAGTTTCGACAAGGATGCTGGTTCCAGCCTCACAGGCTGGTAGCTTGATTGGAAAACAGGGAGGAACTGTTAAATCCATTCAAGAGGCATCTAACTGTATAGTTAGAGTTCTTGGATCAGAGGACCTACCGGTTTTTGCTCTTTCAGATGACAGAGTTGTTGAAGTAGTGGGCGAGCCAGTTGGTGTCCACAAAGGAATTGAACTAATTGCATCTCACCTCAGGAAGTTTTTAGTTGACCGCAGTATAATTCCAGTATTTGAAATGCATATGCAGGCAAATCCTCCCATGGAGCACATTCCCCCTCATCAATCATGGGGTCCACCTCAAAGTATTCCACACAATGCTGGTGGGGGTCCTGGATATGGGCCACCTAATCCCCAGTACATACCATCTTCTCGGCAGCAATTTGACAACTACTATCCACCAGCTGACTTGCCCCCGCCTATGGAGAAACAGCCGCATCATGGCATATCAGCTTATGGACGAGAAGCTCCTATGGGTGTTCATACATCATCAAATGCTCAATCAGCACCATCAATGGTCTCACAGCTCACACATCAAATGCAAATTCCATTGTCATATGCTGATGCTGTTATTGGCACAGCTGGTGCAAGTATAAGCTATATTCGTCGGGCTAGTGGGGCAACTGTTACAATACAAGAGACGAGGGGTGTTCCTGGGGAGATGACTGTTGAAATAAGTGGAAGTGCTTCCCAAGTCCAAGCAGCAGAGCAACTGATACAGAATTTCATGGTCGAGGCTGGAGCACCACAACAGCCACAAGCTACTGCCCCTGTGGATCAGGGTTATAATTCCTATCCAGCTCATGGTTCTGTGTATGCATCTCCCCCATCCAACCAAGGTCACCAAGGCCATACTGGCGGCTATGGCTCAGTCTATGGCCAACACTATGGTTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009909 GO:0009911 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0097159 GO:1901363 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

538

Amino Acids

57.04

Weight (kDa)

4.85

Isoelectric Point (pI)

44.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	143 - 195	1.5e-14	KH domain
KH_1	PF00013	235 - 302	1.1e-15	KH domain
KH_1	PF00013	417 - 480	5.1e-13	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007921)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04610 AT3G04610 AT3G04610 AT3G04610
fragaria_vesca	FvH4_6g02580 FvH4_6g02580 FvH4_6g02580 FvH4_6g02580
malus_domestica	MD04G1227000.v1.1 MD12G1244000.v1.1
prunus_persica	Prupe.6G345700_v2.0.a1 Prupe.6G345700_v2.0.a1
pyrus_communis	pycom04g20030 pycom12g22300
rosa_chinensis	RchiOBHm_Chr3g0450491
rosa_laevigata	RLG00000025727
rosa_multiflora	Rmu_sc0005951.1_g000006
rosa_roxburghii	Rroxscaffold_6G00428170
rosa_rugosa	Rorug02G0628000
rosa_samantha	Rh3AG028700 Rh3BG029200 Rh3CG028000 Rh3DG028900
rosa_wichuraiana	Rw3G002210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1506
AccB7I	CCANNNNNTGG	2 cut(s)	23, 1523
AccII	CGCG	1 cut(s)	511
AccIII	TCCGGA	1 cut(s)	429
AciI	CCGC	5 cut(s)	125, 934, 1136, 1154, 1578
AclWI	GGATC	3 cut(s)	48, 817, 1503
AcoI	YGGCCR	1 cut(s)	1597
AcsI	RAATTY	2 cut(s)	1263, 1441
AfaI	GTAC	3 cut(s)	30, 48, 1079
AfiI	CCNNNNNNNGG	8 cut(s)	23, 436, 685, 686, 1058, 1141, 1160, 1523
AgeI	ACCGGT	1 cut(s)	823
AgsI	TTSAA	6 cut(s)	386, 776, 857, 896, 956, 1391
AjnI	CCWGG	6 cut(s)	403, 412, 541, 679, 1051, 1372
Alw21I	GWGCWC	3 cut(s)	517, 990, 1465
Alw26I	GTCTC	4 cut(s)	71, 500, 1243, 1352
AlwI	GGATC	3 cut(s)	48, 817, 1503
Ama87I	CYCGRG	2 cut(s)	50, 213
Aor13HI	TCCGGA	1 cut(s)	429
AoxI	GGCC	8 cut(s)	93, 216, 401, 410, 616, 1061, 1567, 1597
ApeKI	GCWGC	5 cut(s)	182, 242, 307, 1096, 1421
ApoI	RAATTY	2 cut(s)	1263, 1441
AsiGI	ACCGGT	1 cut(s)	823
Asp700I	GAANNNNTTC	1 cut(s)	1405
AspLEI	GCGC	1 cut(s)	115
AspS9I	GGNCC	6 cut(s)	216, 536, 817, 1013, 1049, 1061
AsuHPI	GGTGA	4 cut(s)	401, 428, 902, 1553
AsuNHI	GCTAGC	1 cut(s)	115
AvaI	CYCGRG	2 cut(s)	50, 213
AvaII	GGWCC	4 cut(s)	536, 817, 1013, 1049
AxyI	CCTNAGG	1 cut(s)	914
BalI	TGGCCA	1 cut(s)	1599
BanII	GRGCYC	1 cut(s)	517
Bbv12I	GWGCWC	3 cut(s)	517, 990, 1465
BbvCI	CCTCAGC	3 cut(s)	102, 108, 276
BbvI	GCAGC	5 cut(s)	194, 254, 319, 1108, 1433
BccI	CCATC	8 cut(s)	29, 402, 527, 608, 641, 1093, 1237, 1555
BcgI	CGANNNNNNTGC	2 cut(s)	691, 725
BciT130I	CCWGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
BcoDI	GTCTC	4 cut(s)	71, 500, 1243, 1352
BfaI	CTAG	3 cut(s)	116, 1332, 1615
BfoI	RGCGCY	1 cut(s)	116
BglI	GCCNNNNNGGC	4 cut(s)	304, 409, 728, 1575
BisI	GCNGC	7 cut(s)	183, 243, 308, 1097, 1154, 1422, 1579
BlsI	GCNGC	7 cut(s)	184, 244, 309, 1098, 1155, 1423, 1580
Bme1390I	CCNGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
Bme18I	GGWCC	4 cut(s)	536, 817, 1013, 1049
BmeT110I	CYCGRG	2 cut(s)	50, 213
BmgT120I	GGNCC	6 cut(s)	216, 536, 817, 1013, 1049, 1061
BmiI	GGNNCC	5 cut(s)	441, 585, 717, 1014, 1050
BmrFI	CCNGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
BmrI	ACTGGG	1 cut(s)	1069
BmsI	GCATC	7 cut(s)	646, 699, 791, 914, 1165, 1273, 1547
BmtI	GCTAGC	1 cut(s)	119
BmuI	ACTGGG	1 cut(s)	1069
BpmI	CTGGAG	2 cut(s)	525, 1479
Bpu10I	CCTNAGC	5 cut(s)	102, 108, 132, 171, 276
BpuEI	CTTGAG	4 cut(s)	177, 237, 284, 654
BsaAI	YACGTR	1 cut(s)	46
BsaBI	GATNNNNATC	2 cut(s)	12, 39
BsaI	GGTCTC	1 cut(s)	1243
BsaJI	CCNNGG	8 cut(s)	96, 120, 219, 679, 981, 1373, 1555, 1564
BsaWI	WCCGGW	2 cut(s)	429, 823
BsaXI	ACNNNNNCTCC	2 cut(s)	747, 777
Bsc4I	CCNNNNNNNGG	8 cut(s)	23, 436, 685, 686, 1058, 1141, 1160, 1523
Bse118I	RCCGGY	1 cut(s)	823
Bse1I	ACTGG	5 cut(s)	299, 872, 947, 1075, 1579
Bse21I	CCTNAGG	1 cut(s)	914
Bse3DI	GCAATG	3 cut(s)	144, 183, 243
Bse8I	GATNNNNATC	2 cut(s)	12, 39
BseAI	TCCGGA	1 cut(s)	429
BseBI	CCWGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
BseDI	CCNNGG	8 cut(s)	96, 120, 219, 679, 981, 1373, 1555, 1564
BseGI	GGATG	5 cut(s)	413, 438, 661, 714, 1547
BseJI	GATNNNNATC	2 cut(s)	12, 39
BseLI	CCNNNNNNNGG	8 cut(s)	23, 436, 685, 686, 1058, 1141, 1160, 1523
BseMI	GCAATG	3 cut(s)	144, 183, 243
BseNI	ACTGG	5 cut(s)	299, 872, 947, 1075, 1579
BseRI	GAGGAG	4 cut(s)	344, 347, 518, 596
BseXI	GCAGC	5 cut(s)	194, 254, 319, 1108, 1433
Bsh1236I	CGCG	1 cut(s)	511
BshFI	GGCC	8 cut(s)	95, 218, 403, 412, 618, 1063, 1569, 1599
BshTI	ACCGGT	1 cut(s)	823
BsiHKAI	GWGCWC	3 cut(s)	517, 990, 1465
BsiHKCI	CYCGRG	2 cut(s)	50, 213
BsiSI	CCGG	3 cut(s)	430, 573, 824
BslFI	GGGAC	1 cut(s)	300
BslI	CCNNNNNNNGG	8 cut(s)	23, 436, 685, 686, 1058, 1141, 1160, 1523
BsmAI	GTCTC	4 cut(s)	71, 500, 1243, 1352
BsmBI	CGTCTC	2 cut(s)	500, 1352
BsmFI	GGGAC	1 cut(s)	300
BsmI	GAATGC	1 cut(s)	91
BsnI	GGCC	8 cut(s)	95, 218, 403, 412, 618, 1063, 1569, 1599
Bso31I	GGTCTC	1 cut(s)	1243
BsoBI	CYCGRG	2 cut(s)	50, 213
Bsp1286I	GDGCHC	3 cut(s)	517, 990, 1465
Bsp13I	TCCGGA	1 cut(s)	429
Bsp1407I	TGTACA	1 cut(s)	28
Bsp143I	GATC	3 cut(s)	40, 809, 1495
Bsp19I	CCATGG	3 cut(s)	120, 219, 981
BspACI	CCGC	5 cut(s)	125, 934, 1136, 1154, 1578
BspANI	GGCC	8 cut(s)	95, 218, 403, 412, 618, 1063, 1569, 1599
BspEI	TCCGGA	1 cut(s)	429
BspFNI	CGCG	1 cut(s)	511
BspHI	TCATGA	1 cut(s)	364
BspLI	GGNNCC	5 cut(s)	441, 585, 717, 1014, 1050
BspOI	GCTAGC	1 cut(s)	119
BspPI	GGATC	3 cut(s)	48, 817, 1503
BspTNI	GGTCTC	1 cut(s)	1243
BsrDI	GCAATG	3 cut(s)	144, 183, 243
BsrFI	RCCGGY	1 cut(s)	823
BsrGI	TGTACA	1 cut(s)	28
BsrI	ACTGG	5 cut(s)	299, 872, 947, 1075, 1579
BssAI	RCCGGY	1 cut(s)	823
BssECI	CCNNGG	8 cut(s)	96, 120, 219, 679, 981, 1373, 1555, 1564
BssMI	GATC	3 cut(s)	40, 809, 1495
BssT1I	CCWWGG	5 cut(s)	120, 219, 981, 1555, 1564
Bst2UI	CCWGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
Bst4CI	ACNGT	5 cut(s)	376, 763, 791, 1345, 1387
BstAUI	TGTACA	1 cut(s)	28
BstBAI	YACGTR	1 cut(s)	46
BstC8I	GCNNGC	6 cut(s)	117, 513, 517, 637, 869, 969
BstDSI	CCRYGG	3 cut(s)	120, 219, 981
BstEII	GGTNACC	1 cut(s)	1559
BstF5I	GGATG	5 cut(s)	413, 438, 661, 714, 1547
BstFNI	CGCG	1 cut(s)	511
BstH2I	RGCGCY	1 cut(s)	116
BstHHI	GCGC	1 cut(s)	115
BstKTI	GATC	3 cut(s)	43, 812, 1498
BstMAI	GTCTC	4 cut(s)	71, 500, 1243, 1352
BstMBI	GATC	3 cut(s)	40, 809, 1495
BstNI	CCWGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
BstPI	GGTNACC	1 cut(s)	1559
BstSCI	CCNGG	6 cut(s)	403, 412, 541, 679, 1051, 1372
BstUI	CGCG	1 cut(s)	511
BstV1I	GCAGC	5 cut(s)	194, 254, 319, 1108, 1433
BstXI	CCANNNNNNTGG	1 cut(s)	1607
Bsu36I	CCTNAGG	1 cut(s)	914
BsuRI	GGCC	8 cut(s)	95, 218, 403, 412, 618, 1063, 1569, 1599
BtgI	CCRYGG	3 cut(s)	120, 219, 981
BtsCI	GGATG	5 cut(s)	413, 438, 661, 714, 1547
BtsI	GCAGTG	1 cut(s)	192
BtsIMutI	CAGTG	1 cut(s)	192
Cac8I	GCNNGC	6 cut(s)	117, 513, 517, 637, 869, 969
CciI	TCATGA	1 cut(s)	364
CfoI	GCGC	1 cut(s)	115
Cfr10I	RCCGGY	1 cut(s)	823
Cfr13I	GGNCC	6 cut(s)	216, 536, 817, 1013, 1049, 1061
CseI	GACGC	5 cut(s)	176, 218, 350, 480, 517
Csp6I	GTAC	3 cut(s)	29, 47, 1078
CspAI	ACCGGT	1 cut(s)	823
CspCI	CAANNNNNGTGG	2 cut(s)	1024, 1059
CviQI	GTAC	3 cut(s)	29, 47, 1078
DpnI	GATC	3 cut(s)	42, 811, 1497
DpnII	GATC	3 cut(s)	40, 809, 1495
EaeI	YGGCCR	1 cut(s)	1597
EciI	GGCGGA	1 cut(s)	140
Ecl136II	GAGCTC	1 cut(s)	515
Eco130I	CCWWGG	5 cut(s)	120, 219, 981, 1555, 1564
Eco24I	GRGCYC	1 cut(s)	517
Eco31I	GGTCTC	1 cut(s)	1243
Eco47I	GGWCC	4 cut(s)	536, 817, 1013, 1049
Eco53kI	GAGCTC	1 cut(s)	515
Eco81I	CCTNAGG	1 cut(s)	914
Eco88I	CYCGRG	2 cut(s)	50, 213
Eco91I	GGTNACC	1 cut(s)	1559
EcoICRI	GAGCTC	1 cut(s)	515
EcoO109I	RGGNCCY	2 cut(s)	817, 1049
EcoO65I	GGTNACC	1 cut(s)	1559
EcoRII	CCWGG	6 cut(s)	403, 412, 541, 679, 1051, 1372
EcoT14I	CCWWGG	5 cut(s)	120, 219, 981, 1555, 1564
EcoT22I	ATGCAT	2 cut(s)	963, 1540
EcoT38I	GRGCYC	1 cut(s)	517
ErhI	CCWWGG	5 cut(s)	120, 219, 981, 1555, 1564
Esp3I	CGTCTC	2 cut(s)	500, 1352
FalI	AAGNNNNNCTT	2 cut(s)	246, 278
FaqI	GGGAC	1 cut(s)	300
FauI	CCCGC	1 cut(s)	1143
FauNDI	CATATG	2 cut(s)	963, 1276
Fnu4HI	GCNGC	7 cut(s)	183, 243, 308, 1097, 1154, 1422, 1579
FokI	GGATG	5 cut(s)	420, 445, 668, 721, 1534
FriOI	GRGCYC	1 cut(s)	517
Fsp4HI	GCNGC	7 cut(s)	183, 243, 308, 1097, 1154, 1422, 1579
FspBI	CTAG	3 cut(s)	116, 1332, 1615
GlaI	GCGC	1 cut(s)	114
GluI	GCNGC	7 cut(s)	183, 243, 308, 1097, 1154, 1422, 1579
GsuI	CTGGAG	2 cut(s)	525, 1479
HaeII	RGCGCY	1 cut(s)	116
HaeIII	GGCC	8 cut(s)	95, 218, 403, 412, 618, 1063, 1569, 1599
HapII	CCGG	3 cut(s)	430, 573, 824
HgaI	GACGC	5 cut(s)	176, 218, 350, 480, 517
HhaI	GCGC	1 cut(s)	115
Hin6I	GCGC	1 cut(s)	113
HinP1I	GCGC	1 cut(s)	113
HincII	GTYRAC	1 cut(s)	931
HindII	GTYRAC	1 cut(s)	931
HindIII	AAGCTT	1 cut(s)	19
HinfI	GANTC	4 cut(s)	53, 67, 590, 662
HpaII	CCGG	3 cut(s)	430, 573, 824
HphI	GGTGA	4 cut(s)	401, 428, 902, 1553
Hpy166II	GTNNAC	4 cut(s)	29, 883, 931, 1016
Hpy188I	TCNGA	4 cut(s)	58, 450, 814, 841
Hpy188III	TCNNGA	6 cut(s)	194, 344, 365, 430, 776, 916
Hpy8I	GTNNAC	4 cut(s)	29, 883, 931, 1016
Hpy99I	CGWCG	1 cut(s)	1329
HpyAV	CCTTC	2 cut(s)	380, 445
HpyCH4III	ACNGT	5 cut(s)	376, 763, 791, 1345, 1387
HpyCH4IV	ACGT	1 cut(s)	45
HpySE526I	ACGT	1 cut(s)	45
HspAI	GCGC	1 cut(s)	113
Kpn2I	TCCGGA	1 cut(s)	429
Kzo9I	GATC	3 cut(s)	40, 809, 1495
LmnI	GCTCC	5 cut(s)	583, 679, 985, 1192, 1460
Lsp1109I	GCAGC	5 cut(s)	194, 254, 319, 1108, 1433
LweI	GCATC	7 cut(s)	646, 699, 791, 914, 1165, 1273, 1547
MaeI	CTAG	3 cut(s)	116, 1332, 1615
MaeII	ACGT	1 cut(s)	45
MaeIII	GTNAC	5 cut(s)	64, 336, 1345, 1559, 1610
MalI	GATC	3 cut(s)	42, 811, 1497
MboI	GATC	3 cut(s)	40, 809, 1495
MboII	GAAGA	5 cut(s)	380, 406, 585, 657, 1080
MfeI	CAATTG	1 cut(s)	609
MhlI	GDGCHC	3 cut(s)	517, 990, 1465
MlsI	TGGCCA	1 cut(s)	1599
MluNI	TGGCCA	1 cut(s)	1599
MlyI	GAGTC	2 cut(s)	61, 62
MmeI	TCCRAC	1 cut(s)	1575
Mox20I	TGGCCA	1 cut(s)	1599
Mph1103I	ATGCAT	2 cut(s)	963, 1540
MroI	TCCGGA	1 cut(s)	429
MroXI	GAANNNNTTC	1 cut(s)	1405
MscI	TGGCCA	1 cut(s)	1599
MseI	TTAA	3 cut(s)	489, 522, 765
Msp20I	TGGCCA	1 cut(s)	1599
MspA1I	CMGCKG	2 cut(s)	1124, 1301
MspI	CCGG	3 cut(s)	430, 573, 824
MspR9I	CCNGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
MunI	CAATTG	1 cut(s)	609
Mva1269I	GAATGC	1 cut(s)	91
MvaI	CCWGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
MvnI	CGCG	1 cut(s)	511
NcoI	CCATGG	3 cut(s)	120, 219, 981
NdeI	CATATG	2 cut(s)	963, 1276
NdeII	GATC	3 cut(s)	40, 809, 1495
NheI	GCTAGC	1 cut(s)	115
NlaIV	GGNNCC	5 cut(s)	441, 585, 717, 1014, 1050
NmeAIII	GCCGAG	2 cut(s)	121, 1072
NmuCI	GTSAC	2 cut(s)	64, 1559
NsiI	ATGCAT	2 cut(s)	963, 1540
PagI	TCATGA	1 cut(s)	364
PctI	GAATGC	1 cut(s)	91
PdmI	GAANNNNTTC	1 cut(s)	1405
PfeI	GAWTC	2 cut(s)	590, 662
PflMI	CCANNNNNTGG	2 cut(s)	23, 1523
PfoI	TCCNGGA	2 cut(s)	541, 1051
PinAI	ACCGGT	1 cut(s)	823
PkrI	GCNGC	7 cut(s)	184, 244, 309, 1098, 1155, 1423, 1580
PleI	GAGTC	2 cut(s)	61, 61
PpsI	GAGTC	2 cut(s)	61, 61
Ppu21I	YACGTR	1 cut(s)	46
PpuMI	RGGWCCY	2 cut(s)	817, 1049
PsiI	TTATAA	1 cut(s)	1506
Psp124BI	GAGCTC	1 cut(s)	517
Psp5II	RGGWCCY	2 cut(s)	817, 1049
Psp6I	CCWGG	6 cut(s)	403, 412, 541, 679, 1051, 1372
PspEI	GGTNACC	1 cut(s)	1559
PspGI	CCWGG	6 cut(s)	403, 412, 541, 679, 1051, 1372
PspN4I	GGNNCC	5 cut(s)	441, 585, 717, 1014, 1050
PspPI	GGNCC	6 cut(s)	216, 536, 817, 1013, 1049, 1061
PspPPI	RGGWCCY	2 cut(s)	817, 1049
PvuII	CAGCTG	2 cut(s)	1124, 1301
RsaI	GTAC	3 cut(s)	30, 48, 1079
RsaNI	GTAC	3 cut(s)	29, 47, 1078
SacI	GAGCTC	1 cut(s)	517
SaqAI	TTAA	3 cut(s)	489, 522, 765
SatI	GCNGC	7 cut(s)	183, 243, 308, 1097, 1154, 1422, 1579
Sau3AI	GATC	3 cut(s)	40, 809, 1495
Sau96I	GGNCC	6 cut(s)	216, 536, 817, 1013, 1049, 1061
SchI	GAGTC	2 cut(s)	61, 62
ScrFI	CCNGG	6 cut(s)	405, 414, 543, 681, 1053, 1374
SduI	GDGCHC	3 cut(s)	517, 990, 1465
SfaNI	GCATC	7 cut(s)	646, 699, 791, 914, 1165, 1273, 1547
SfiI	GGCCNNNNNGGCC	1 cut(s)	409
SinI	GGWCC	4 cut(s)	536, 817, 1013, 1049
SmlI	CTYRAG	4 cut(s)	192, 252, 263, 669
SmoI	CTYRAG	4 cut(s)	192, 252, 263, 669
SsiI	CCGC	5 cut(s)	125, 934, 1136, 1154, 1578
SspMI	CTAG	3 cut(s)	116, 1332, 1615
SstI	GAGCTC	1 cut(s)	517
StyD4I	CCNGG	6 cut(s)	403, 412, 541, 679, 1051, 1372
StyI	CCWWGG	5 cut(s)	120, 219, 981, 1555, 1564
TaaI	ACNGT	5 cut(s)	376, 763, 791, 1345, 1387
TaiI	ACGT	1 cut(s)	48
TaqI	TCGA	2 cut(s)	701, 1452
TatI	WGTACW	2 cut(s)	28, 1077
TauI	GCSGC	2 cut(s)	1156, 1581
TfiI	GAWTC	2 cut(s)	590, 662
Tru1I	TTAA	3 cut(s)	489, 522, 765
Tru9I	TTAA	3 cut(s)	489, 522, 765
TscAI	CASTG	1 cut(s)	192
TseFI	GTSAC	2 cut(s)	64, 1559
TseI	GCWGC	5 cut(s)	182, 242, 307, 1096, 1421
Tsp45I	GTSAC	2 cut(s)	64, 1559
TspDTI	ATGAA	6 cut(s)	24, 381, 475, 620, 1190, 1435
TspRI	CASTG	1 cut(s)	192
Van91I	CCANNNNNTGG	2 cut(s)	23, 1523
VpaK11BI	GGWCC	4 cut(s)	536, 817, 1013, 1049
XapI	RAATTY	2 cut(s)	1263, 1441
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1571
XmnI	GAANNNNTTC	1 cut(s)	1405
XspI	CTAG	3 cut(s)	116, 1332, 1615
Zsp2I	ATGCAT	2 cut(s)	963, 1540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.