Poly(RC)-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04610 AT3G04610 AT3G04610 AT3G04610 |
| fragaria_vesca | FvH4_6g02580 FvH4_6g02580 FvH4_6g02580 FvH4_6g02580 |
| malus_domestica | MD04G1227000.v1.1 MD12G1244000.v1.1 |
| prunus_persica | Prupe.6G345700_v2.0.a1 Prupe.6G345700_v2.0.a1 |
| pyrus_communis | pycom04g20030 pycom12g22300 |
| rosa_chinensis | RchiOBHm_Chr3g0450491 |
| rosa_laevigata | RLG00000025727 |
| rosa_multiflora | Rmu_sc0005951.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00428170 |
| rosa_rugosa | Rorug02G0628000 |
| rosa_samantha | Rh3AG028700 Rh3BG029200 Rh3CG028000 Rh3DG028900 |
| rosa_wichuraiana | Rw3G002210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1602 |
| Acc16I | TGCGCA | 1 cut(s) | 540 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1580 |
| AccII | CGCG | 1 cut(s) | 730 |
| AccIII | TCCGGA | 1 cut(s) | 522 |
| AciI | CCGC | 7 cut(s) | 140, 1027, 1163, 1320, 1364, 1562, 1674 |
| AclWI | GGATC | 1 cut(s) | 910 |
| AcsI | RAATTY | 3 cut(s) | 618, 1359, 1537 |
| AcuI | CTGAAG | 1 cut(s) | 72 |
| AfaI | GTAC | 3 cut(s) | 93, 201, 1709 |
| AflIII | ACRYGT | 1 cut(s) | 728 |
| AgsI | TTSAA | 7 cut(s) | 869, 932, 950, 989, 1049, 1487, 1514 |
| Alw21I | GWGCWC | 4 cut(s) | 610, 978, 1504, 1561 |
| Alw26I | GTCTC | 3 cut(s) | 593, 796, 1448 |
| Alw44I | GTGCAC | 1 cut(s) | 974 |
| AlwI | GGATC | 1 cut(s) | 910 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1553 |
| Aor13HI | TCCGGA | 1 cut(s) | 522 |
| AoxI | GGCC | 9 cut(s) | 192, 294, 330, 366, 494, 503, 709, 1088, 1160 |
| ApaLI | GTGCAC | 1 cut(s) | 974 |
| ApeKI | GCWGC | 6 cut(s) | 464, 467, 802, 812, 1517, 1564 |
| ApoI | RAATTY | 3 cut(s) | 618, 1359, 1537 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1093, 1125, 1301, 1333 |
| AspLEI | GCGC | 3 cut(s) | 382, 427, 541 |
| AsuC2I | CCSGG | 4 cut(s) | 173, 269, 507, 774 |
| AsuHPI | GGTGA | 6 cut(s) | 98, 494, 764, 971, 1244, 1336 |
| AvaII | GGWCC | 4 cut(s) | 629, 1109, 1148, 1591 |
| BaeGI | GKGCMC | 2 cut(s) | 274, 978 |
| BanII | GRGCYC | 1 cut(s) | 610 |
| BbsI | GAAGAC | 1 cut(s) | 915 |
| Bbv12I | GWGCWC | 4 cut(s) | 610, 978, 1504, 1561 |
| BbvI | GCAGC | 6 cut(s) | 451, 454, 789, 824, 1529, 1576 |
| BccI | CCATC | 8 cut(s) | 74, 495, 620, 701, 734, 743, 1072, 1651 |
| BceAI | ACGGC | 3 cut(s) | 177, 638, 1687 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 446, 480 |
| BcnI | CCSGG | 4 cut(s) | 173, 269, 507, 774 |
| BcoDI | GTCTC | 3 cut(s) | 593, 796, 1448 |
| BfaI | CTAG | 4 cut(s) | 167, 1428, 1458, 1711 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 502 |
| BisI | GCNGC | 9 cut(s) | 140, 465, 468, 803, 813, 1163, 1518, 1565, 1675 |
| BlsI | GCNGC | 9 cut(s) | 141, 466, 469, 804, 814, 1164, 1519, 1566, 1676 |
| Bme18I | GGWCC | 4 cut(s) | 629, 1109, 1148, 1591 |
| BmiI | GGNNCC | 5 cut(s) | 534, 631, 678, 1110, 1149 |
| BmrI | ACTGGG | 4 cut(s) | 256, 292, 328, 364 |
| BmsI | GCATC | 8 cut(s) | 241, 451, 516, 884, 1007, 1369, 1540, 1643 |
| BmuI | ACTGGG | 4 cut(s) | 256, 292, 328, 364 |
| BpiI | GAAGAC | 1 cut(s) | 915 |
| BpmI | CTGGAG | 1 cut(s) | 1575 |
| BpuEI | CTTGAG | 1 cut(s) | 1101 |
| BpuMI | CCSGG | 4 cut(s) | 173, 269, 507, 774 |
| BsaJI | CCNNGG | 6 cut(s) | 102, 634, 1190, 1255, 1469, 1594 |
| BsaWI | WCCGGW | 1 cut(s) | 522 |
| Bse1I | ACTGG | 8 cut(s) | 262, 297, 298, 333, 334, 369, 370, 1300 |
| Bse3DI | GCAATG | 1 cut(s) | 708 |
| BseAI | TCCGGA | 1 cut(s) | 522 |
| BseDI | CCNNGG | 6 cut(s) | 102, 634, 1190, 1255, 1469, 1594 |
| BseGI | GGATG | 5 cut(s) | 506, 531, 712, 754, 1123 |
| BseMI | GCAATG | 1 cut(s) | 708 |
| BseMII | CTCAG | 3 cut(s) | 1088, 1328, 1698 |
| BseNI | ACTGG | 8 cut(s) | 262, 297, 298, 333, 334, 369, 370, 1300 |
| BseRI | GAGGAG | 5 cut(s) | 431, 434, 611, 689, 1179 |
| BseSI | GKGCMC | 2 cut(s) | 274, 978 |
| BseXI | GCAGC | 6 cut(s) | 451, 454, 789, 824, 1529, 1576 |
| Bsh1236I | CGCG | 1 cut(s) | 730 |
| BshFI | GGCC | 9 cut(s) | 194, 296, 332, 368, 496, 505, 711, 1090, 1162 |
| BsiHKAI | GWGCWC | 4 cut(s) | 610, 978, 1504, 1561 |
| BsiSI | CCGG | 5 cut(s) | 173, 268, 507, 523, 773 |
| BsmAI | GTCTC | 3 cut(s) | 593, 796, 1448 |
| BsmBI | CGTCTC | 1 cut(s) | 593 |
| BsmI | GAATGC | 1 cut(s) | 136 |
| BsnI | GGCC | 9 cut(s) | 194, 296, 332, 368, 496, 505, 711, 1090, 1162 |
| Bsp1286I | GDGCHC | 5 cut(s) | 274, 610, 978, 1504, 1561 |
| Bsp13I | TCCGGA | 1 cut(s) | 522 |
| Bsp1407I | TGTACA | 1 cut(s) | 199 |
| Bsp143I | GATC | 2 cut(s) | 902, 1341 |
| Bsp19I | CCATGG | 1 cut(s) | 1255 |
| BspACI | CCGC | 7 cut(s) | 140, 1027, 1163, 1320, 1364, 1562, 1674 |
| BspANI | GGCC | 9 cut(s) | 194, 296, 332, 368, 496, 505, 711, 1090, 1162 |
| BspCNI | CTCAG | 3 cut(s) | 1087, 1327, 1697 |
| BspEI | TCCGGA | 1 cut(s) | 522 |
| BspFNI | CGCG | 1 cut(s) | 730 |
| BspLI | GGNNCC | 5 cut(s) | 534, 631, 678, 1110, 1149 |
| BspPI | GGATC | 1 cut(s) | 910 |
| BspQI | GCTCTTC | 1 cut(s) | 933 |
| BsrDI | GCAATG | 1 cut(s) | 708 |
| BsrGI | TGTACA | 1 cut(s) | 199 |
| BsrI | ACTGG | 8 cut(s) | 262, 297, 298, 333, 334, 369, 370, 1300 |
| BssECI | CCNNGG | 6 cut(s) | 102, 634, 1190, 1255, 1469, 1594 |
| BssMI | GATC | 2 cut(s) | 902, 1341 |
| BssT1I | CCWWGG | 2 cut(s) | 1255, 1594 |
| Bst4CI | ACNGT | 5 cut(s) | 103, 856, 1441, 1483, 1622 |
| Bst6I | CTCTTC | 6 cut(s) | 279, 315, 351, 696, 933, 1270 |
| BstAUI | TGTACA | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 2 cut(s) | 610, 1697 |
| BstDEI | CTNAG | 4 cut(s) | 1007, 1074, 1314, 1684 |
| BstDSI | CCRYGG | 2 cut(s) | 102, 1255 |
| BstF5I | GGATG | 5 cut(s) | 506, 531, 712, 754, 1123 |
| BstFNI | CGCG | 1 cut(s) | 730 |
| BstHHI | GCGC | 3 cut(s) | 382, 427, 541 |
| BstKTI | GATC | 2 cut(s) | 905, 1344 |
| BstMAI | GTCTC | 3 cut(s) | 593, 796, 1448 |
| BstMBI | GATC | 2 cut(s) | 902, 1341 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 502, 783, 821, 1363, 1433, 1680 |
| BstNSI | RCATGY | 2 cut(s) | 1183, 1228 |
| BstSLI | GKGCMC | 2 cut(s) | 274, 978 |
| BstUI | CGCG | 1 cut(s) | 730 |
| BstV1I | GCAGC | 6 cut(s) | 451, 454, 789, 824, 1529, 1576 |
| BstV2I | GAAGAC | 1 cut(s) | 915 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1136 |
| BsuRI | GGCC | 9 cut(s) | 194, 296, 332, 368, 496, 505, 711, 1090, 1162 |
| BtgI | CCRYGG | 2 cut(s) | 102, 1255 |
| BtsCI | GGATG | 5 cut(s) | 506, 531, 712, 754, 1123 |
| BtsIMutI | CAGTG | 4 cut(s) | 290, 326, 362, 1498 |
| Cac8I | GCNNGC | 2 cut(s) | 610, 1697 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1553 |
| CfoI | GCGC | 3 cut(s) | 382, 427, 541 |
| CseI | GACGC | 1 cut(s) | 440 |
| Csp6I | GTAC | 3 cut(s) | 92, 200, 1708 |
| CviQI | GTAC | 3 cut(s) | 92, 200, 1708 |
| DdeI | CTNAG | 4 cut(s) | 1007, 1074, 1314, 1684 |
| DpnI | GATC | 2 cut(s) | 904, 1343 |
| DpnII | GATC | 2 cut(s) | 902, 1341 |
| Eam1104I | CTCTTC | 6 cut(s) | 279, 315, 351, 696, 933, 1270 |
| EarI | CTCTTC | 6 cut(s) | 279, 315, 351, 696, 933, 1270 |
| Ecl136II | GAGCTC | 1 cut(s) | 608 |
| Eco130I | CCWWGG | 2 cut(s) | 1255, 1594 |
| Eco24I | GRGCYC | 1 cut(s) | 610 |
| Eco47I | GGWCC | 4 cut(s) | 629, 1109, 1148, 1591 |
| Eco53kI | GAGCTC | 1 cut(s) | 608 |
| Eco57I | CTGAAG | 1 cut(s) | 72 |
| EcoICRI | GAGCTC | 1 cut(s) | 608 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1148 |
| EcoT14I | CCWWGG | 2 cut(s) | 1255, 1594 |
| EcoT22I | ATGCAT | 2 cut(s) | 1056, 1636 |
| EcoT38I | GRGCYC | 1 cut(s) | 610 |
| ErhI | CCWWGG | 2 cut(s) | 1255, 1594 |
| Esp3I | CGTCTC | 1 cut(s) | 593 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 240, 272 |
| FauNDI | CATATG | 2 cut(s) | 1056, 1372 |
| Fnu4HI | GCNGC | 9 cut(s) | 140, 465, 468, 803, 813, 1163, 1518, 1565, 1675 |
| FokI | GGATG | 5 cut(s) | 513, 538, 719, 761, 1110 |
| FriOI | GRGCYC | 1 cut(s) | 610 |
| Fsp4HI | GCNGC | 9 cut(s) | 140, 465, 468, 803, 813, 1163, 1518, 1565, 1675 |
| FspBI | CTAG | 4 cut(s) | 167, 1428, 1458, 1711 |
| FspI | TGCGCA | 1 cut(s) | 540 |
| GlaI | GCGC | 3 cut(s) | 381, 426, 540 |
| GluI | GCNGC | 9 cut(s) | 140, 465, 468, 803, 813, 1163, 1518, 1565, 1675 |
| GsuI | CTGGAG | 1 cut(s) | 1575 |
| HaeIII | GGCC | 9 cut(s) | 194, 296, 332, 368, 496, 505, 711, 1090, 1162 |
| HapII | CCGG | 5 cut(s) | 173, 268, 507, 523, 773 |
| HgaI | GACGC | 1 cut(s) | 440 |
| HhaI | GCGC | 3 cut(s) | 382, 427, 541 |
| Hin6I | GCGC | 3 cut(s) | 380, 425, 539 |
| HinP1I | GCGC | 3 cut(s) | 380, 425, 539 |
| HincII | GTYRAC | 1 cut(s) | 1024 |
| HindII | GTYRAC | 1 cut(s) | 1024 |
| HindIII | AAGCTT | 1 cut(s) | 829 |
| HinfI | GANTC | 3 cut(s) | 11, 683, 755 |
| HpaII | CCGG | 5 cut(s) | 173, 268, 507, 523, 773 |
| HphI | GGTGA | 6 cut(s) | 98, 494, 764, 971, 1244, 1336 |
| Hpy166II | GTNNAC | 7 cut(s) | 38, 724, 976, 1024, 1112, 1297, 1591 |
| Hpy188I | TCNGA | 5 cut(s) | 16, 181, 436, 907, 1077 |
| Hpy188III | TCNNGA | 6 cut(s) | 455, 523, 623, 869, 932, 1505 |
| Hpy8I | GTNNAC | 7 cut(s) | 38, 724, 976, 1024, 1112, 1297, 1591 |
| Hpy99I | CGWCG | 1 cut(s) | 1425 |
| HpyAV | CCTTC | 1 cut(s) | 538 |
| HpyCH4III | ACNGT | 5 cut(s) | 103, 856, 1441, 1483, 1622 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 502, 783, 821, 1363, 1433, 1680 |
| HpyF3I | CTNAG | 4 cut(s) | 1007, 1074, 1314, 1684 |
| HspAI | GCGC | 3 cut(s) | 380, 425, 539 |
| Kpn2I | TCCGGA | 1 cut(s) | 522 |
| Kzo9I | GATC | 2 cut(s) | 902, 1341 |
| LguI | GCTCTTC | 1 cut(s) | 933 |
| LmnI | GCTCC | 9 cut(s) | 181, 277, 313, 349, 676, 772, 1288, 1507, 1556 |
| Lsp1109I | GCAGC | 6 cut(s) | 451, 454, 789, 824, 1529, 1576 |
| LweI | GCATC | 8 cut(s) | 241, 451, 516, 884, 1007, 1369, 1540, 1643 |
| MaeI | CTAG | 4 cut(s) | 167, 1428, 1458, 1711 |
| MaeIII | GTNAC | 5 cut(s) | 97, 226, 452, 1333, 1441 |
| MalI | GATC | 2 cut(s) | 904, 1343 |
| MboI | GATC | 2 cut(s) | 902, 1341 |
| MfeI | CAATTG | 2 cut(s) | 984, 1352 |
| MhlI | GDGCHC | 5 cut(s) | 274, 610, 978, 1504, 1561 |
| MluI | ACGCGT | 1 cut(s) | 728 |
| Mph1103I | ATGCAT | 2 cut(s) | 1056, 1636 |
| MroI | TCCGGA | 1 cut(s) | 522 |
| MseI | TTAA | 3 cut(s) | 582, 615, 858 |
| MslI | CAYNNNNRTG | 1 cut(s) | 459 |
| MspA1I | CMGCKG | 4 cut(s) | 142, 1220, 1366, 1397 |
| MspI | CCGG | 5 cut(s) | 173, 268, 507, 523, 773 |
| MunI | CAATTG | 2 cut(s) | 984, 1352 |
| Mva1269I | GAATGC | 1 cut(s) | 136 |
| MvnI | CGCG | 1 cut(s) | 730 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 502, 783, 821, 1363, 1433, 1680 |
| NciI | CCSGG | 4 cut(s) | 173, 269, 507, 774 |
| NcoI | CCATGG | 1 cut(s) | 1255 |
| NdeI | CATATG | 2 cut(s) | 1056, 1372 |
| NdeII | GATC | 2 cut(s) | 902, 1341 |
| NlaIV | GGNNCC | 5 cut(s) | 534, 631, 678, 1110, 1149 |
| NmeAIII | GCCGAG | 2 cut(s) | 145, 1171 |
| NmuCI | GTSAC | 3 cut(s) | 97, 226, 452 |
| NsbI | TGCGCA | 1 cut(s) | 540 |
| NsiI | ATGCAT | 2 cut(s) | 1056, 1636 |
| NspI | RCATGY | 2 cut(s) | 1183, 1228 |
| PciSI | GCTCTTC | 1 cut(s) | 933 |
| PctI | GAATGC | 1 cut(s) | 136 |
| PfeI | GAWTC | 3 cut(s) | 11, 683, 755 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1580 |
| PfoI | TCCNGGA | 1 cut(s) | 1150 |
| PkrI | GCNGC | 9 cut(s) | 141, 466, 469, 804, 814, 1164, 1519, 1566, 1676 |
| PpuMI | RGGWCCY | 1 cut(s) | 1148 |
| PsiI | TTATAA | 1 cut(s) | 1602 |
| Psp124BI | GAGCTC | 1 cut(s) | 610 |
| Psp5II | RGGWCCY | 1 cut(s) | 1148 |
| PspN4I | GGNNCC | 5 cut(s) | 534, 631, 678, 1110, 1149 |
| PspPPI | RGGWCCY | 1 cut(s) | 1148 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1553 |
| PvuII | CAGCTG | 2 cut(s) | 1220, 1397 |
| RsaI | GTAC | 3 cut(s) | 93, 201, 1709 |
| RsaNI | GTAC | 3 cut(s) | 92, 200, 1708 |
| RseI | CAYNNNNRTG | 1 cut(s) | 459 |
| SacI | GAGCTC | 1 cut(s) | 610 |
| SapI | GCTCTTC | 1 cut(s) | 933 |
| SaqAI | TTAA | 3 cut(s) | 582, 615, 858 |
| SatI | GCNGC | 9 cut(s) | 140, 465, 468, 803, 813, 1163, 1518, 1565, 1675 |
| Sau3AI | GATC | 2 cut(s) | 902, 1341 |
| SduI | GDGCHC | 5 cut(s) | 274, 610, 978, 1504, 1561 |
| SfaNI | GCATC | 8 cut(s) | 241, 451, 516, 884, 1007, 1369, 1540, 1643 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 502 |
| SinI | GGWCC | 4 cut(s) | 629, 1109, 1148, 1591 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 459 |
| SmlI | CTYRAG | 1 cut(s) | 1116 |
| SmoI | CTYRAG | 1 cut(s) | 1116 |
| SsiI | CCGC | 7 cut(s) | 140, 1027, 1163, 1320, 1364, 1562, 1674 |
| SspI | AATATT | 1 cut(s) | 1044 |
| SspMI | CTAG | 4 cut(s) | 167, 1428, 1458, 1711 |
| SstI | GAGCTC | 1 cut(s) | 610 |
| StyI | CCWWGG | 2 cut(s) | 1255, 1594 |
| TaaI | ACNGT | 5 cut(s) | 103, 856, 1441, 1483, 1622 |
| TaqI | TCGA | 2 cut(s) | 9, 1420 |
| TatI | WGTACW | 1 cut(s) | 199 |
| TauI | GCSGC | 3 cut(s) | 142, 1165, 1677 |
| TfiI | GAWTC | 3 cut(s) | 11, 683, 755 |
| Tru1I | TTAA | 3 cut(s) | 582, 615, 858 |
| Tru9I | TTAA | 3 cut(s) | 582, 615, 858 |
| TscAI | CASTG | 4 cut(s) | 297, 333, 369, 1498 |
| TseFI | GTSAC | 3 cut(s) | 97, 226, 452 |
| TseI | GCWGC | 6 cut(s) | 464, 467, 802, 812, 1517, 1564 |
| Tsp45I | GTSAC | 3 cut(s) | 97, 226, 452 |
| TspDTI | ATGAA | 5 cut(s) | 17, 225, 568, 747, 1531 |
| TspGWI | ACGGA | 1 cut(s) | 580 |
| TspRI | CASTG | 4 cut(s) | 297, 333, 369, 1498 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1580 |
| VneI | GTGCAC | 1 cut(s) | 974 |
| VpaK11BI | GGWCC | 4 cut(s) | 629, 1109, 1148, 1591 |
| XapI | RAATTY | 3 cut(s) | 618, 1359, 1537 |
| XceI | RCATGY | 2 cut(s) | 1183, 1228 |
| XspI | CTAG | 4 cut(s) | 167, 1428, 1458, 1711 |
| Zsp2I | ATGCAT | 2 cut(s) | 1056, 1636 |