Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006103

Physical Location & Seq

Genomic Coordinates Forward (+)

1479339 .. 1482042

Gene Structure 2704 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G05210.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1233 bp

ATGGCGAACGAAGACGACGACGGTGAGAAATCCAGAAGTCTGCACCAACAGATTGCTAGAAAACCCAAAACCCAGATCGTGATTGGTGTGCCATCGTACCAGGAAGTTTTGGAAAGCTCACAGACGAAGTCCACGCCTCCATCTCTCTTCAAGCCTTCCCAGAGTTTCTCTCAGGCTTTCGCTTTCGTCAAGTCGTCCGACGTCTACTCTCCTCCTCCTCCTTCCTCCGCAGCCGCCTCTTCTTCTCAGCCGTCGGGCGCTTCTCAGGTGCCCCACAGTTCAAGCCAAACGCATCAAACTGATGGAGCCTCATCTTCTTCTACTCCTGTAGCCACTGGCTCTGTACCATCAAACACAACTCAAAATCGTAACGCTATTCTCGTTAGCCATCGACAGAAAGGAAACCCGCTTCTTAAACATATCAGGAATGTGAAATGGGTTTTCTCAGATATCATTCCAGATTACGTGCTTGGTCAAAACTCTTGCGCTTTGTATTTAAGCTTGCGGTATCATCTCCTACATCCGGATTACCTCTATTTCCGCATTAGGGAACTACAAAAGAATTTCAAGCTAAGTGTTGTTCTTTGCCATGTCGACGTGGAAGATACGGTGAAACCGTTGCTTGAAGTCACAAAAACCGCTCTACTTCATGATTGCACTCTATTGTGTGCCTGGAGCATGACAGAATGTGCCCGTTATTTGGAAACGATAAAAGTCTATGAAAACAAACCTGCAGATCTCATCCAAGGCCAAATGGATACAGATTACCTTTCACGGCTAAACCATTCTCTTACAAGCATTCGACATGTAAACAAGAGCGATGTAGTTACACTTGGTTCTACATTCGGGTCTCTTGCTCATATAATCGATGCATCCATGGAAGATTTAGCACGTTGTCCCGGGATTGGCGAACGTAAGGTGAAGCGGTTGTATGATACATTCCACGAGCCTTTCAAGCGTGCAACTTCGAGCTACCCGTCTGTTGTAGAACCACCAATCCCGGAAGCTCCAGTTGAGAAGGATGTGAACTCAGAGGAACCTGTTGAAGAAGACGAGGATTTTGTGGAGGACTCGAGAAAACGCAAGAAGAAGGAGCCCGAGCCCGAGAAAACTGTGAAGACCGCACTCTCTGCTGTTTTTGCTCGTTACTCTGATAGACTTAGCAAGAAAAAGGAGAAACAGAAGGAGAAAGATACAACAACGGCGTCAGATGCTGAAACCCACCAAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000014 GO:0000109 GO:0000110 GO:0000710 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003697 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006294 GO:0006296 GO:0006298 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007049 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010212 GO:0010213 GO:0010224 GO:0010332 GO:0016043 GO:0016787 GO:0016788 GO:0016888 GO:0016893 GO:0017108 GO:0022402 GO:0022414 GO:0022607 GO:0032991 GO:0033554 GO:0033683 GO:0034622 GO:0034641 GO:0034644 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048256 GO:0050896 GO:0051321 GO:0051716 GO:0061982 GO:0065003 GO:0065004 GO:0070522 GO:0070914 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0104004 GO:0140097 GO:1901360 GO:1901363 GO:1903046 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko01524 ko03420 ko03460 map01524 map03420 map03460

Pfam Domains

Protein Families

HHH_2 HHH_5 Rad10

Protein Analysis

410

Amino Acids

45.75

Weight (kDa)

6.71

Isoelectric Point (pI)

48.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad10	PF03834	126 - 238	3.9e-45	Binding domain of DNA repair protein Ercc1 (rad10/Swi10)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05210 AT3G05210
fragaria_vesca	FvH4_6g05460 FvH4_6g05460 FvH4_6g05460 FvH4_6g05460 FvH4_6g05460 FvH4_6g05460 FvH4_6g05460
malus_domestica	MD04G1208500.v1.1
prunus_persica	Prupe.6G329400_v2.0.a1 Prupe.6G329400_v2.0.a1 Prupe.6G329400_v2.0.a1 Prupe.6G329400_v2.0.a1
pyrus_communis	pycom04g18460
rosa_chinensis	RchiOBHm_Chr3g0454231
rosa_laevigata	RLG00000025474
rosa_multiflora	Rmu_sc0026184.1_g000002 Rmu_sc0038077.1_g000001
rosa_roxburghii	Rroxscaffold_165G00437010 Rroxscaffold_6G00425350
rosa_rugosa	Rorug02G0653600
rosa_samantha	Rh3AG056900 Rh3BG058300 Rh3CG057500 Rh3DG058800
rosa_wichuraiana	Rw3G004380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	204
Acc36I	ACCTGC	1 cut(s)	739
AccB1I	GGYRCC	1 cut(s)	268
AccBSI	CCGCTC	1 cut(s)	641
AccI	GTMKAC	2 cut(s)	204, 594
AccIII	TCCGGA	1 cut(s)	523
AciI	CCGC	8 cut(s)	228, 234, 407, 505, 541, 639, 925, 1122
AcsI	RAATTY	1 cut(s)	562
AcyI	GRCGYC	2 cut(s)	201, 1205
AfaI	GTAC	2 cut(s)	98, 345
AfiI	CCNNNNNNNGG	4 cut(s)	523, 547, 700, 905
AflIII	ACRYGT	1 cut(s)	805
AgsI	TTSAA	6 cut(s)	151, 282, 568, 626, 955, 1046
AjiI	CACGTC	1 cut(s)	598
AjnI	CCWGG	2 cut(s)	99, 671
AloI	GAACNNNNNNTCC	2 cut(s)	981, 1013
AluBI	AGCT	5 cut(s)	117, 501, 571, 972, 1007
AluI	AGCT	5 cut(s)	117, 501, 571, 972, 1007
Alw26I	GTCTC	1 cut(s)	855
AlwNI	CAGNNNCTG	1 cut(s)	1214
Ama87I	CYCGRG	4 cut(s)	899, 1072, 1097, 1103
Aor13HI	TCCGGA	1 cut(s)	523
AoxI	GGCC	1 cut(s)	748
ApeKI	GCWGC	1 cut(s)	230
ApoI	RAATTY	1 cut(s)	562
ArsI	GACNNNNNNTTYG	2 cut(s)	1043, 1075
AspLEI	GCGC	2 cut(s)	260, 488
AsuC2I	CCSGG	3 cut(s)	900, 901, 1001
AsuHPI	GGTGA	3 cut(s)	35, 622, 931
AvaI	CYCGRG	4 cut(s)	899, 1072, 1097, 1103
BaeGI	GKGCMC	2 cut(s)	273, 694
BanI	GGYRCC	1 cut(s)	268
BanII	GRGCYC	2 cut(s)	1098, 1104
BauI	CACGAG	1 cut(s)	944
BbsI	GAAGAC	3 cut(s)	18, 1056, 1124
BbvI	GCAGC	1 cut(s)	242
BccI	CCATC	5 cut(s)	100, 148, 296, 355, 396
BceAI	ACGGC	3 cut(s)	235, 791, 1218
BciT130I	CCWGG	2 cut(s)	101, 673
BciVI	GTATCC	1 cut(s)	751
BcnI	CCSGG	3 cut(s)	900, 901, 1001
BcoDI	GTCTC	1 cut(s)	855
BfaI	CTAG	1 cut(s)	57
BfmI	CTRYAG	2 cut(s)	327, 732
BfoI	RGCGCY	1 cut(s)	261
BfuAI	ACCTGC	1 cut(s)	739
BfuI	GTATCC	1 cut(s)	751
BglII	AGATCT	1 cut(s)	736
BisI	GCNGC	2 cut(s)	231, 234
BlsI	GCNGC	2 cut(s)	232, 235
Bme1390I	CCNGG	5 cut(s)	101, 673, 900, 901, 1001
BmeT110I	CYCGRG	4 cut(s)	899, 1072, 1097, 1103
BmgBI	CACGTC	1 cut(s)	598
BmiI	GGNNCC	4 cut(s)	270, 307, 1038, 1095
BmrFI	CCNGG	5 cut(s)	101, 673, 900, 901, 1001
BmsI	GCATC	4 cut(s)	301, 859, 881, 1201
BpiI	GAAGAC	3 cut(s)	18, 1056, 1124
BplI	GAGNNNNNCTC	2 cut(s)	154, 186
BpmI	CTGGAG	2 cut(s)	694, 993
BpuMI	CCSGG	3 cut(s)	900, 901, 1001
Bsa29I	ATCGAT	1 cut(s)	867
BsaAI	YACGTR	1 cut(s)	466
BsaHI	GRCGYC	2 cut(s)	201, 1205
BsaI	GGTCTC	1 cut(s)	855
BsaJI	CCNNGG	3 cut(s)	745, 876, 899
BsaWI	WCCGGW	1 cut(s)	523
Bsc4I	CCNNNNNNNGG	4 cut(s)	523, 547, 700, 905
Bse1I	ACTGG	2 cut(s)	340, 1010
BseAI	TCCGGA	1 cut(s)	523
BseBI	CCWGG	2 cut(s)	101, 673
BseCI	ATCGAT	1 cut(s)	867
BseDI	CCNNGG	3 cut(s)	745, 876, 899
BseGI	GGATG	4 cut(s)	520, 741, 872, 1027
BseLI	CCNNNNNNNGG	4 cut(s)	523, 547, 700, 905
BseMII	CTCAG	5 cut(s)	185, 260, 278, 459, 1044
BseNI	ACTGG	2 cut(s)	340, 1010
BseRI	GAGGAG	3 cut(s)	201, 204, 207
BseSI	GKGCMC	2 cut(s)	273, 694
BseXI	GCAGC	1 cut(s)	242
BsgI	GTGCAG	1 cut(s)	26
BshFI	GGCC	1 cut(s)	750
BshNI	GGYRCC	1 cut(s)	268
BshVI	ATCGAT	1 cut(s)	867
BsiHKCI	CYCGRG	4 cut(s)	899, 1072, 1097, 1103
BsiSI	CCGG	3 cut(s)	524, 900, 1001
BslFI	GGGAC	1 cut(s)	882
BslI	CCNNNNNNNGG	4 cut(s)	523, 547, 700, 905
BsmAI	GTCTC	1 cut(s)	855
BsmFI	GGGAC	1 cut(s)	882
BsmI	GAATGC	1 cut(s)	798
BsnI	GGCC	1 cut(s)	750
Bso31I	GGTCTC	1 cut(s)	855
BsoBI	CYCGRG	4 cut(s)	899, 1072, 1097, 1103
Bsp1286I	GDGCHC	4 cut(s)	273, 694, 1098, 1104
Bsp13I	TCCGGA	1 cut(s)	523
Bsp143I	GATC	2 cut(s)	75, 736
Bsp19I	CCATGG	1 cut(s)	876
BspACI	CCGC	8 cut(s)	228, 234, 407, 505, 541, 639, 925, 1122
BspANI	GGCC	1 cut(s)	750
BspCNI	CTCAG	5 cut(s)	184, 259, 277, 458, 1043
BspDI	ATCGAT	1 cut(s)	867
BspEI	TCCGGA	1 cut(s)	523
BspHI	TCATGA	1 cut(s)	649
BspLI	GGNNCC	4 cut(s)	270, 307, 1038, 1095
BspMAI	CTGCAG	1 cut(s)	736
BspMI	ACCTGC	1 cut(s)	739
BspT107I	GGYRCC	1 cut(s)	268
BspTNI	GGTCTC	1 cut(s)	855
BsrBI	CCGCTC	1 cut(s)	641
BsrI	ACTGG	2 cut(s)	340, 1010
BssECI	CCNNGG	3 cut(s)	745, 876, 899
BssMI	GATC	2 cut(s)	75, 736
BssNI	GRCGYC	2 cut(s)	201, 1205
BssSI	CACGAG	1 cut(s)	944
BssT1I	CCWWGG	2 cut(s)	745, 876
Bst2BI	CACGAG	1 cut(s)	944
Bst2UI	CCWGG	2 cut(s)	101, 673
Bst4CI	ACNGT	5 cut(s)	23, 278, 610, 618, 1114
Bst6I	CTCTTC	2 cut(s)	152, 244
BstACI	GRCGYC	2 cut(s)	201, 1205
BstAPI	GCANNNNNTGC	1 cut(s)	1130
BstBAI	YACGTR	1 cut(s)	466
BstC8I	GCNNGC	2 cut(s)	503, 960
BstDEI	CTNAG	7 cut(s)	171, 246, 264, 445, 572, 1030, 1160
BstDSI	CCRYGG	1 cut(s)	876
BstF5I	GGATG	4 cut(s)	520, 741, 872, 1027
BstH2I	RGCGCY	1 cut(s)	261
BstHHI	GCGC	2 cut(s)	260, 488
BstKTI	GATC	2 cut(s)	78, 739
BstMAI	GTCTC	1 cut(s)	855
BstMBI	GATC	2 cut(s)	75, 736
BstMWI	GCNNNNNNNGC	4 cut(s)	955, 1130, 1139, 1211
BstNI	CCWGG	2 cut(s)	101, 673
BstNSI	RCATGY	1 cut(s)	809
BstSCI	CCNGG	5 cut(s)	99, 671, 898, 899, 999
BstSFI	CTRYAG	2 cut(s)	327, 732
BstSLI	GKGCMC	2 cut(s)	273, 694
BstV1I	GCAGC	1 cut(s)	242
BstV2I	GAAGAC	3 cut(s)	18, 1056, 1124
BstX2I	RGATCY	1 cut(s)	736
BstYI	RGATCY	1 cut(s)	736
Bsu15I	ATCGAT	1 cut(s)	867
BsuI	GTATCC	1 cut(s)	751
BsuRI	GGCC	1 cut(s)	750
BsuTUI	ATCGAT	1 cut(s)	867
BtgI	CCRYGG	1 cut(s)	876
BtgZI	GCGATG	1 cut(s)	834
BtrI	CACGTC	1 cut(s)	598
BtsCI	GGATG	4 cut(s)	520, 741, 872, 1027
BtsIMutI	CAGTG	1 cut(s)	333
BveI	ACCTGC	1 cut(s)	739
Cac8I	GCNNGC	2 cut(s)	503, 960
CaiI	CAGNNNCTG	1 cut(s)	1214
CciI	TCATGA	1 cut(s)	649
CfoI	GCGC	2 cut(s)	260, 488
Cfr9I	CCCGGG	1 cut(s)	899
ClaI	ATCGAT	1 cut(s)	867
CseI	GACGC	1 cut(s)	1194
Csp6I	GTAC	2 cut(s)	97, 344
CviAII	CATG	5 cut(s)	590, 650, 679, 806, 877
CviQI	GTAC	2 cut(s)	97, 344
DdeI	CTNAG	7 cut(s)	171, 246, 264, 445, 572, 1030, 1160
DpnI	GATC	2 cut(s)	77, 738
DpnII	GATC	2 cut(s)	75, 736
Eam1104I	CTCTTC	2 cut(s)	152, 244
EarI	CTCTTC	2 cut(s)	152, 244
Eco130I	CCWWGG	2 cut(s)	745, 876
Eco24I	GRGCYC	2 cut(s)	1098, 1104
Eco31I	GGTCTC	1 cut(s)	855
Eco32I	GATATC	1 cut(s)	451
Eco88I	CYCGRG	4 cut(s)	899, 1072, 1097, 1103
EcoRII	CCWGG	2 cut(s)	99, 671
EcoRV	GATATC	1 cut(s)	451
EcoT14I	CCWWGG	2 cut(s)	745, 876
EcoT22I	ATGCAT	1 cut(s)	874
EcoT38I	GRGCYC	2 cut(s)	1098, 1104
ErhI	CCWWGG	2 cut(s)	745, 876
FaeI	CATG	5 cut(s)	593, 653, 682, 809, 880
FaqI	GGGAC	1 cut(s)	882
FatI	CATG	5 cut(s)	589, 649, 678, 805, 876
FauI	CCCGC	1 cut(s)	414
FblI	GTMKAC	2 cut(s)	204, 594
Fnu4HI	GCNGC	2 cut(s)	231, 234
FokI	GGATG	4 cut(s)	507, 728, 859, 1034
FriOI	GRGCYC	2 cut(s)	1098, 1104
Fsp4HI	GCNGC	2 cut(s)	231, 234
FspBI	CTAG	1 cut(s)	57
GlaI	GCGC	2 cut(s)	259, 487
GluI	GCNGC	2 cut(s)	231, 234
GsuI	CTGGAG	2 cut(s)	694, 993
HaeII	RGCGCY	1 cut(s)	261
HaeIII	GGCC	1 cut(s)	750
HapII	CCGG	3 cut(s)	524, 900, 1001
HgaI	GACGC	1 cut(s)	1194
HhaI	GCGC	2 cut(s)	260, 488
Hin1I	GRCGYC	2 cut(s)	201, 1205
Hin1II	CATG	5 cut(s)	593, 653, 682, 809, 880
Hin6I	GCGC	2 cut(s)	258, 486
HinP1I	GCGC	2 cut(s)	258, 486
HincII	GTYRAC	1 cut(s)	595
HindII	GTYRAC	1 cut(s)	595
HindIII	AAGCTT	1 cut(s)	499
HinfI	GANTC	1 cut(s)	1070
HpaII	CCGG	3 cut(s)	524, 900, 1001
HphI	GGTGA	3 cut(s)	35, 622, 931
Hpy166II	GTNNAC	5 cut(s)	132, 205, 595, 811, 1027
Hpy188I	TCNGA	5 cut(s)	199, 448, 1033, 1153, 1210
Hpy188III	TCNNGA	7 cut(s)	33, 79, 424, 458, 524, 650, 1074
Hpy8I	GTNNAC	5 cut(s)	132, 205, 595, 811, 1027
Hpy99I	CGWCG	5 cut(s)	20, 23, 203, 256, 599
HpyAV	CCTTC	5 cut(s)	165, 231, 1012, 1084, 1177
HpyCH4III	ACNGT	5 cut(s)	23, 278, 610, 618, 1114
HpyCH4IV	ACGT	5 cut(s)	201, 465, 597, 892, 913
HpyCH4V	TGCA	5 cut(s)	43, 657, 734, 872, 962
HpyF10VI	GCNNNNNNNGC	4 cut(s)	955, 1130, 1139, 1211
HpyF3I	CTNAG	7 cut(s)	171, 246, 264, 445, 572, 1030, 1160
HpySE526I	ACGT	5 cut(s)	201, 465, 597, 892, 913
Hsp92I	GRCGYC	2 cut(s)	201, 1205
Hsp92II	CATG	5 cut(s)	593, 653, 682, 809, 880
HspAI	GCGC	2 cut(s)	258, 486
Kpn2I	TCCGGA	1 cut(s)	523
Kzo9I	GATC	2 cut(s)	75, 736
LmnI	GCTCC	4 cut(s)	305, 675, 1012, 1093
Lsp1109I	GCAGC	1 cut(s)	242
LweI	GCATC	4 cut(s)	301, 859, 881, 1201
MaeI	CTAG	1 cut(s)	57
MaeII	ACGT	5 cut(s)	201, 465, 597, 892, 913
MaeIII	GTNAC	4 cut(s)	368, 628, 826, 1145
MalI	GATC	2 cut(s)	77, 738
MbiI	CCGCTC	1 cut(s)	641
MboI	GATC	2 cut(s)	75, 736
MflI	RGATCY	1 cut(s)	736
MhlI	GDGCHC	4 cut(s)	273, 694, 1098, 1104
MluCI	AATT	2 cut(s)	562, 1228
MlyI	GAGTC	1 cut(s)	1064
MmeI	TCCRAC	1 cut(s)	222
Mph1103I	ATGCAT	1 cut(s)	874
MroI	TCCGGA	1 cut(s)	523
MseI	TTAA	3 cut(s)	414, 497, 1231
MspI	CCGG	3 cut(s)	524, 900, 1001
MspR9I	CCNGG	5 cut(s)	101, 673, 900, 901, 1001
Mva1269I	GAATGC	1 cut(s)	798
MvaI	CCWGG	2 cut(s)	101, 673
MwoI	GCNNNNNNNGC	4 cut(s)	955, 1130, 1139, 1211
NciI	CCSGG	3 cut(s)	900, 901, 1001
NcoI	CCATGG	1 cut(s)	876
NdeII	GATC	2 cut(s)	75, 736
NlaIII	CATG	5 cut(s)	593, 653, 682, 809, 880
NlaIV	GGNNCC	4 cut(s)	270, 307, 1038, 1095
NmuCI	GTSAC	1 cut(s)	628
NsiI	ATGCAT	1 cut(s)	874
NspI	RCATGY	1 cut(s)	809
PaeR7I	CTCGAG	1 cut(s)	1072
PagI	TCATGA	1 cut(s)	649
PciI	ACATGT	1 cut(s)	805
PcsI	WCGNNNNNNNCGW	4 cut(s)	15, 378, 614, 974
PctI	GAATGC	1 cut(s)	798
PflFI	GACNNNGTC	1 cut(s)	127
PfoI	TCCNGGA	1 cut(s)	999
PkrI	GCNGC	2 cut(s)	232, 235
PleI	GAGTC	1 cut(s)	1064
PpsI	GAGTC	1 cut(s)	1064
Ppu21I	YACGTR	1 cut(s)	466
PscI	ACATGT	1 cut(s)	805
Psp6I	CCWGG	2 cut(s)	99, 671
PspGI	CCWGG	2 cut(s)	99, 671
PspN4I	GGNNCC	4 cut(s)	270, 307, 1038, 1095
PstI	CTGCAG	1 cut(s)	736
PstNI	CAGNNNCTG	1 cut(s)	1214
PsuI	RGATCY	1 cut(s)	736
PsyI	GACNNNGTC	1 cut(s)	127
RsaI	GTAC	2 cut(s)	98, 345
RsaNI	GTAC	2 cut(s)	97, 344
SalI	GTCGAC	1 cut(s)	593
SaqAI	TTAA	3 cut(s)	414, 497, 1231
SatI	GCNGC	2 cut(s)	231, 234
Sau3AI	GATC	2 cut(s)	75, 736
SchI	GAGTC	1 cut(s)	1064
ScrFI	CCNGG	5 cut(s)	101, 673, 900, 901, 1001
SduI	GDGCHC	4 cut(s)	273, 694, 1098, 1104
SfaNI	GCATC	4 cut(s)	301, 859, 881, 1201
SfcI	CTRYAG	2 cut(s)	327, 732
Sfr274I	CTCGAG	1 cut(s)	1072
SlaI	CTCGAG	1 cut(s)	1072
SmaI	CCCGGG	1 cut(s)	901
SmlI	CTYRAG	1 cut(s)	1072
SmoI	CTYRAG	1 cut(s)	1072
Sse9I	AATT	2 cut(s)	562, 1228
SsiI	CCGC	8 cut(s)	228, 234, 407, 505, 541, 639, 925, 1122
SspMI	CTAG	1 cut(s)	57
StyD4I	CCNGG	5 cut(s)	99, 671, 898, 899, 999
StyI	CCWWGG	2 cut(s)	745, 876
TaaI	ACNGT	5 cut(s)	23, 278, 610, 618, 1114
TaiI	ACGT	5 cut(s)	204, 468, 600, 895, 916
TaqI	TCGA	6 cut(s)	391, 594, 802, 867, 968, 1073
TasI	AATT	2 cut(s)	562, 1228
TauI	GCSGC	1 cut(s)	236
Tru1I	TTAA	3 cut(s)	414, 497, 1231
Tru9I	TTAA	3 cut(s)	414, 497, 1231
TscAI	CASTG	1 cut(s)	340
TseFI	GTSAC	1 cut(s)	628
TseI	GCWGC	1 cut(s)	230
Tsp45I	GTSAC	1 cut(s)	628
TspDTI	ATGAA	2 cut(s)	638, 735
TspMI	CCCGGG	1 cut(s)	899
TspRI	CASTG	1 cut(s)	340
Tth111I	GACNNNGTC	1 cut(s)	127
XapI	RAATTY	1 cut(s)	562
XceI	RCATGY	1 cut(s)	809
XcmI	CCANNNNNNNNNTGG	1 cut(s)	80
XhoI	CTCGAG	1 cut(s)	1072
XmaI	CCCGGG	1 cut(s)	899
XmiI	GTMKAC	2 cut(s)	204, 594
XspI	CTAG	1 cut(s)	57
ZraI	GACGTC	1 cut(s)	202
Zsp2I	ATGCAT	1 cut(s)	874

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.