Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007134

Physical Location & Seq

Genomic Coordinates Forward (+)

1561671 .. 1567336

Gene Structure 5666 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G05420.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGCTATGCCTAGGGCAACCTCTGGTCCCGCTTACCCGGAGAGGTTCTACGCTGCTGCATCTTATGTCGGTCTCGACGGATCTGATTCGTCGGCGAAAAACGTCATCTCGAAATTCCCCGATGATACTGCACTACTTCTCTATGCGCTATACCAGCAGGCTACTGTAGGACCATGCAACACTCCGAAACCTAGTGCCTGGAGACCAGTGGAGCAAAGCAAATGGAAAAGTTGGCAGGGGCTCGGAACCATGCCCTCCATTGAGGCAATGCGTCTCTTTGTGAAAATTCTGGAGGAAGATGATCCTGGTTGGTATTCGAGGGCATCTAATGATATTCCAGATCCTGTTGTAGATGTCCAAATTAATAGAGCAAAAGATGAGCCTGTTGTTGAGAATGGGAGCACATTTAGTGAGACAAAAACAATTTCTACGGAGAATGGACGTTTGGCTGAAACCCAAGATAAAGATGTAGTCTCAGAAGACTCAAATACTGTTTCTGTATATAACCAGTGGACTGCACCCCAAACATCAGGTCAGCGTCCAAAAGCTCGTTACGAGCATGGCGCAGCAGTTATTCAAGATAAGATGTATATATATGGTGGAAATCACAATGGCCGTTACCTTGGTGATCTTCATGTTCTAGATTTAAAAAGTTGGACTTGGTCAAGAGTTGAAACCAAGGTTGCAACAGAATCTCAGGAAACATCAACTCCGACATTGTTAGCTCCTTGTGCTGGTCATTCTTTGATAGCATGGGACAACAAGCTGCTGTCTATCGGTGGTCACACAAAGGATCCCTCAGAATCTATGCAAGTGAAGGTCTTTGATCCCCATACCATTACATGGTCAATGTTAAAGACATATGGAAAACCACCGGTTTCACGTGGAGGCCAGTCAGTTACAATGGTGGGTAAAACCTTGGTGATATTTGGCGGGCAAGATGCAAAGAGATCACTTCTGAACGATTTGCATATACTTGACCTAGACACGATGACCTGGGATGAGATAGATGCCGTGGGTGTATCTCCATCTCCGAGGTCTGATCATGCTGCTGCAGTGCATGCAGAACGGTTCCTTCTTATCTTTGGTGGCGGCTCACATGCAACCTGTTTCGATGACCTGCATGTCCTTGATTTGCAAACTATGGAGTGGTCAAGACCAGCACAGCAAGGTGATGCACCAACTCCAAGAGCTGGACATGCTGGCGTGACAATTGGGGAGAACTGGTTTATTGTTGGTGGCGGTGATAACAAGAGTGGGGCATCGGAGAGTGTTGTACTAAACATGTCAACTCTTGCATGGTCGGTCGTTGCTTCAGTTCAAGGACGTGTACCTCTTGCTAGCGAGGGATTAAGTTTAGTGGTGAGTTCATACAATGGTGAAGATGTACTAGTCGCTTTTGGTGGATACAATGGACGTTACAATAACGAAATTAATCTTCTTAAACCAAGCCACAAATCAACATTGCAAACAAAGACTCTGGAAGCGCCTTTGCCAGGTAGTCTTTCTGCTGTTAATAATGCCACAACCAGAGACATTGAGTCTGAGGTTGAGGTGAGCCAAGAAGGCAGGGTACGGGAAATTGTCATGGACAATGTTAACCCTGGATCAAAGGTTGAAGGAAACAGCGAACGCATTATTGCGACTATTAAATCTGAGAAGGAAGAGCTGGAGGCATCACTGAACAAAGAGAGGATGCAGACTCTCCAACTAAGGCAAGAGTTAGGAGAAGCAGAATTACGAAACACAGATTTGTACAAGGAACTTCAATCTGTTCGTGGCCAACTTGCAGCCGAACAATCAAGGTGTTTCAAACTGGAGGTTGATGTTGCAGAGCTAAGACAAAAGCTTCAAACATTGGAAACACTACAGAAGGAACTCGAACTCCTGCAACGTCAAAAGGCTGCCTCAGAACAAGCTGCAATGAACGCTAAACGACAGGGCTCGGGTGGCGTATGGGGCTGGCTCGCTGGAAGCCCTCAGGAAAAAGATGATGATTCGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000062 GO:0000166 GO:0001101 GO:0001666 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0006869 GO:0006950 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009753 GO:0010033 GO:0010876 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033218 GO:0036094 GO:0036293 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0051179 GO:0051234 GO:0070482 GO:0071702 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901567 GO:1901681 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ACBP Kelch_3 Kelch_4 Kelch_5 Kelch_6

Protein Analysis

668

Amino Acids

73.07

Weight (kDa)

5.16

Isoelectric Point (pI)

44.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ACBP	PF00887	14 - 96	6.4e-19	Acyl CoA binding protein
Kelch_KLHDC2_KLHL20_DRC7	PF24681	154 - 234	5.5e-18	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_HCF	PF13854	157 - 230	3.5e-08	Host cell factor, Kelch-repeats domain
Beta-prop_FBX42	PF13415	158 - 228	2.8e-13	FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1	PF24981	170 - 302	4.5e-19	Attractin/LZTR1 beta-propeller
Beta-prop_TYW4	PF13418	170 - 372	1.1e-06	tRNA wybutosine-synthesizing protein 4, beta-propeller
Kelch_1	PF01344	184 - 226	9.7e-09	Kelch motif
Kelch_HCF	PF13854	206 - 365	9.8e-16	Host cell factor, Kelch-repeats domain
Beta-prop_FBX42	PF13415	244 - 367	3.4e-24	FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	247 - 470	5.7e-57	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_ATRN-LZTR1	PF24981	259 - 368	9.9e-14	Attractin/LZTR1 beta-propeller
Beta-prop_ATRN-LZTR1	PF24981	309 - 481	8.1e-20	Attractin/LZTR1 beta-propeller
Beta-prop_FBX42	PF13415	347 - 491	1.4e-20	FBX42, beta-propeller domain
Kelch_HCF	PF13854	360 - 415	1.6e-08	Host cell factor, Kelch-repeats domain
ACBP4_C	PF24922	545 - 648	8.6e-41	Acyl-CoA-binding domain-containing protein 4-6, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05420 AT3G05420 AT5G27630 AT5G27630 AT5G27630 AT5G27630
fragaria_vesca	FvH4_6g06301 FvH4_6g06301 FvH4_6g06301
malus_domestica	MD04G1202500.v1.1 MD12G1216500.v1.1
prunus_persica	Prupe.6G322800_v2.0.a1 Prupe.6G322800_v2.0.a1
pyrus_communis	pycom04g17870 pycom12g20200
rosa_chinensis	RchiOBHm_Chr3g0455341
rosa_laevigata	RLG00000025368
rosa_multiflora	Rmu_sc0002169.1_g000045 Rmu_sc0024960.1_g000003
rosa_roxburghii	Rroxscaffold_6G00424350
rosa_rugosa	Rorug03G0006600 Rorug03G0006700
rosa_samantha	Rh3CG066800 Rh3DG068300
rosa_wichuraiana	Rw3G005220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1124
Acc36I	ACCTGC	1 cut(s)	1128
AccB7I	CCANNNNNTGG	2 cut(s)	843, 1193
AciI	CCGC	4 cut(s)	30, 933, 1092, 1242
AclWI	GGATC	7 cut(s)	88, 296, 335, 788, 801, 821, 1615
AcoI	YGGCCR	2 cut(s)	613, 1780
AcsI	RAATTY	2 cut(s)	113, 285
AcuI	CTGAAG	1 cut(s)	1299
AcvI	CACGTG	1 cut(s)	884
AfaI	GTAC	5 cut(s)	1278, 1332, 1389, 1575, 1757
AfiI	CCNNNNNNNGG	4 cut(s)	734, 843, 1193, 1496
AflIII	ACRYGT	2 cut(s)	1284, 1327
AgeI	ACCGGT	1 cut(s)	874
AgsI	TTSAA	7 cut(s)	578, 674, 1322, 1619, 1769, 1813, 1853
AhdI	GACNNNNNGTC	1 cut(s)	1540
AhlI	ACTAGT	1 cut(s)	1390
AjiI	CACGTC	1 cut(s)	1328
AjnI	CCWGG	5 cut(s)	197, 304, 995, 1495, 1603
AjuI	GAANNNNNNNTTGG	2 cut(s)	428, 460
AloI	GAACNNNNNNTCC	2 cut(s)	1869, 1901
AluBI	AGCT	8 cut(s)	548, 725, 766, 1193, 1669, 1837, 1849, 1919
AluI	AGCT	8 cut(s)	548, 725, 766, 1193, 1669, 1837, 1849, 1919
Alw21I	GWGCWC	1 cut(s)	404
Alw26I	GTCTC	6 cut(s)	77, 196, 278, 407, 478, 1527
AlwI	GGATC	7 cut(s)	88, 296, 335, 788, 801, 821, 1615
AlwNI	CAGNNNCTG	1 cut(s)	344
Ama87I	CYCGRG	1 cut(s)	1945
AoxI	GGCC	3 cut(s)	613, 889, 1780
ApeKI	GCWGC	9 cut(s)	53, 56, 566, 766, 1049, 1052, 1790, 1904, 1919
ApoI	RAATTY	2 cut(s)	113, 285
ArsI	GACNNNNNNTTYG	2 cut(s)	517, 549
AseI	ATTAAT	2 cut(s)	363, 1434
AsiGI	ACCGGT	1 cut(s)	874
AspA2I	CCTAGG	1 cut(s)	11
AspLEI	GCGC	3 cut(s)	148, 566, 1489
AspS9I	GGNCC	2 cut(s)	26, 170
AsuC2I	CCSGG	1 cut(s)	38
AsuHPI	GGTGA	7 cut(s)	638, 934, 1184, 1256, 1375, 1391, 1567
AsuNHI	GCTAGC	1 cut(s)	1340
AvaI	CYCGRG	1 cut(s)	1945
AvaII	GGWCC	2 cut(s)	26, 170
AvrII	CCTAGG	1 cut(s)	11
AxyI	CCTNAGG	1 cut(s)	1980
BalI	TGGCCA	1 cut(s)	1782
BamHI	GGATCC	1 cut(s)	793
BanII	GRGCYC	2 cut(s)	243, 1946
BarI	GAAGNNNNNNTAC	4 cut(s)	1557, 1589, 1722, 1754
BbrPI	CACGTG	1 cut(s)	884
BbsI	GAAGAC	1 cut(s)	486
Bbv12I	GWGCWC	1 cut(s)	404
BbvI	GCAGC	9 cut(s)	40, 43, 578, 753, 1036, 1039, 1802, 1891, 1906
BccI	CCATC	1 cut(s)	1036
BceAI	ACGGC	2 cut(s)	600, 998
BcgI	CGANNNNNNTGC	2 cut(s)	110, 144
BciT130I	CCWGG	5 cut(s)	199, 306, 997, 1497, 1605
BciVI	GTATCC	1 cut(s)	1400
BclI	TGATCA	1 cut(s)	1042
BcnI	CCSGG	1 cut(s)	38
BcoDI	GTCTC	6 cut(s)	77, 196, 278, 407, 478, 1527
BcuI	ACTAGT	1 cut(s)	1390
BfaI	CTAG	6 cut(s)	12, 192, 641, 983, 1341, 1391
BfmI	CTRYAG	3 cut(s)	165, 1053, 1868
BfoI	RGCGCY	1 cut(s)	1490
BfuAI	ACCTGC	1 cut(s)	1128
BfuI	GTATCC	1 cut(s)	1400
BglI	GCCNNNNNGGC	1 cut(s)	1566
BlnI	CCTAGG	1 cut(s)	11
Bme1390I	CCNGG	6 cut(s)	38, 199, 306, 997, 1497, 1605
Bme18I	GGWCC	2 cut(s)	26, 170
BmeRI	GACNNNNNGTC	1 cut(s)	1540
BmeT110I	CYCGRG	1 cut(s)	1945
BmgBI	CACGTC	1 cut(s)	1328
BmgT120I	GGNCC	2 cut(s)	26, 170
BmiI	GGNNCC	4 cut(s)	28, 247, 795, 1073
BmrFI	CCNGG	6 cut(s)	38, 199, 306, 997, 1497, 1605
BmsI	GCATC	8 cut(s)	68, 332, 931, 1000, 1165, 1271, 1685, 1686
BmtI	GCTAGC	1 cut(s)	1344
BpiI	GAAGAC	1 cut(s)	486
BpmI	CTGGAG	4 cut(s)	220, 311, 1691, 1838
BpuMI	CCSGG	1 cut(s)	38
BsaAI	YACGTR	1 cut(s)	884
BsaI	GGTCTC	2 cut(s)	77, 196
BsaJI	CCNNGG	8 cut(s)	11, 622, 678, 918, 996, 1014, 1034, 1603
BsaWI	WCCGGW	1 cut(s)	874
BsaXI	ACNNNNNCTCC	6 cut(s)	694, 724, 1211, 1241, 1869, 1899
Bsc4I	CCNNNNNNNGG	4 cut(s)	734, 843, 1193, 1496
Bse118I	RCCGGY	1 cut(s)	874
Bse1I	ACTGG	5 cut(s)	206, 508, 892, 1229, 1821
Bse21I	CCTNAGG	1 cut(s)	1980
Bse3DI	GCAATG	3 cut(s)	273, 1463, 1929
BseBI	CCWGG	5 cut(s)	199, 306, 997, 1497, 1605
BseDI	CCNNGG	8 cut(s)	11, 622, 678, 918, 996, 1014, 1034, 1603
BseGI	GGATG	2 cut(s)	1006, 1701
BseLI	CCNNNNNNNGG	4 cut(s)	734, 843, 1193, 1496
BseMI	GCAATG	3 cut(s)	273, 1463, 1929
BseMII	CTCAG	7 cut(s)	489, 710, 813, 1536, 1647, 1923, 1994
BseNI	ACTGG	5 cut(s)	206, 508, 892, 1229, 1821
BseXI	GCAGC	9 cut(s)	40, 43, 578, 753, 1036, 1039, 1802, 1891, 1906
BsgI	GTGCAG	2 cut(s)	114, 501
Bsh1285I	CGRYCG	1 cut(s)	1308
BshFI	GGCC	3 cut(s)	615, 891, 1782
BshTI	ACCGGT	1 cut(s)	874
BsiEI	CGRYCG	1 cut(s)	1308
BsiHKAI	GWGCWC	1 cut(s)	404
BsiHKCI	CYCGRG	1 cut(s)	1945
BsiSI	CCGG	2 cut(s)	38, 875
BslFI	GGGAC	2 cut(s)	12, 770
BslI	CCNNNNNNNGG	4 cut(s)	734, 843, 1193, 1496
BsmAI	GTCTC	6 cut(s)	77, 196, 278, 407, 478, 1527
BsmBI	CGTCTC	1 cut(s)	278
BsmFI	GGGAC	2 cut(s)	12, 770
BsnI	GGCC	3 cut(s)	615, 891, 1782
Bso31I	GGTCTC	2 cut(s)	77, 196
BsoBI	CYCGRG	1 cut(s)	1945
Bsp1286I	GDGCHC	3 cut(s)	243, 404, 1946
Bsp1407I	TGTACA	1 cut(s)	1755
Bsp143I	GATC	9 cut(s)	80, 301, 340, 628, 793, 826, 950, 1042, 1607
BspACI	CCGC	4 cut(s)	30, 933, 1092, 1242
BspANI	GGCC	3 cut(s)	615, 891, 1782
BspCNI	CTCAG	7 cut(s)	488, 709, 812, 1537, 1648, 1922, 1993
BspLI	GGNNCC	4 cut(s)	28, 247, 795, 1073
BspMAI	CTGCAG	1 cut(s)	1057
BspMI	ACCTGC	1 cut(s)	1128
BspOI	GCTAGC	1 cut(s)	1344
BspPI	GGATC	7 cut(s)	88, 296, 335, 788, 801, 821, 1615
BspQI	GCTCTTC	1 cut(s)	1659
BspTNI	GGTCTC	2 cut(s)	77, 196
BsrDI	GCAATG	3 cut(s)	273, 1463, 1929
BsrFI	RCCGGY	1 cut(s)	874
BsrGI	TGTACA	1 cut(s)	1755
BsrI	ACTGG	5 cut(s)	206, 508, 892, 1229, 1821
BssAI	RCCGGY	1 cut(s)	874
BssECI	CCNNGG	8 cut(s)	11, 622, 678, 918, 996, 1014, 1034, 1603
BssMI	GATC	9 cut(s)	80, 301, 340, 628, 793, 826, 950, 1042, 1607
BssT1I	CCWWGG	4 cut(s)	11, 622, 678, 918
Bst2UI	CCWGG	5 cut(s)	199, 306, 997, 1497, 1605
Bst4CI	ACNGT	3 cut(s)	166, 493, 1071
Bst6I	CTCTTC	1 cut(s)	1659
BstAPI	GCANNNNNTGC	1 cut(s)	1061
BstAUI	TGTACA	1 cut(s)	1755
BstBAI	YACGTR	1 cut(s)	884
BstC8I	GCNNGC	7 cut(s)	159, 935, 1062, 1204, 1342, 1964, 1968
BstDEI	CTNAG	9 cut(s)	475, 696, 799, 1545, 1656, 1712, 1838, 1909, 1980
BstDSI	CCRYGG	1 cut(s)	1014
BstENI	CCTNNNNNAGG	1 cut(s)	1494
BstF5I	GGATG	2 cut(s)	1006, 1701
BstH2I	RGCGCY	1 cut(s)	1490
BstHHI	GCGC	3 cut(s)	148, 566, 1489
BstKTI	GATC	9 cut(s)	83, 304, 343, 631, 796, 829, 953, 1045, 1610
BstMAI	GTCTC	6 cut(s)	77, 196, 278, 407, 478, 1527
BstMBI	GATC	9 cut(s)	80, 301, 340, 628, 793, 826, 950, 1042, 1607
BstMCI	CGRYCG	1 cut(s)	1308
BstMWI	GCNNNNNNNGC	8 cut(s)	154, 731, 1061, 1199, 1566, 1928, 1950, 1959
BstNI	CCWGG	5 cut(s)	199, 306, 997, 1497, 1605
BstNSI	RCATGY	5 cut(s)	1064, 1103, 1127, 1202, 1288
BstSCI	CCNGG	6 cut(s)	36, 197, 304, 995, 1495, 1603
BstSFI	CTRYAG	3 cut(s)	165, 1053, 1868
BstV1I	GCAGC	9 cut(s)	40, 43, 578, 753, 1036, 1039, 1802, 1891, 1906
BstV2I	GAAGAC	1 cut(s)	486
BstX2I	RGATCY	3 cut(s)	80, 340, 793
BstYI	RGATCY	3 cut(s)	80, 340, 793
Bsu36I	CCTNAGG	1 cut(s)	1980
BsuI	GTATCC	1 cut(s)	1400
BsuRI	GGCC	3 cut(s)	615, 891, 1782
BtgI	CCRYGG	1 cut(s)	1014
BtrI	CACGTC	1 cut(s)	1328
BtsCI	GGATG	2 cut(s)	1006, 1701
BtsI	GCAGTG	1 cut(s)	1062
BtsIMutI	CAGTG	4 cut(s)	213, 515, 1062, 1679
BveI	ACCTGC	1 cut(s)	1128
Cac8I	GCNNGC	7 cut(s)	159, 935, 1062, 1204, 1342, 1964, 1968
CaiI	CAGNNNCTG	1 cut(s)	344
CfoI	GCGC	3 cut(s)	148, 566, 1489
Cfr10I	RCCGGY	1 cut(s)	874
Cfr13I	GGNCC	2 cut(s)	26, 170
CseI	GACGC	2 cut(s)	260, 527
Csp6I	GTAC	5 cut(s)	1277, 1331, 1388, 1574, 1756
CspAI	ACCGGT	1 cut(s)	874
CviQI	GTAC	5 cut(s)	1277, 1331, 1388, 1574, 1756
DdeI	CTNAG	9 cut(s)	475, 696, 799, 1545, 1656, 1712, 1838, 1909, 1980
DpnI	GATC	9 cut(s)	82, 303, 342, 630, 795, 828, 952, 1044, 1609
DpnII	GATC	9 cut(s)	80, 301, 340, 628, 793, 826, 950, 1042, 1607
DraI	TTTAAA	1 cut(s)	648
DrdI	GACNNNNNNGTC	1 cut(s)	1124
DriI	GACNNNNNGTC	1 cut(s)	1540
DseDI	GACNNNNNNGTC	1 cut(s)	1124
EaeI	YGGCCR	2 cut(s)	613, 1780
Eam1104I	CTCTTC	1 cut(s)	1659
Eam1105I	GACNNNNNGTC	1 cut(s)	1540
EarI	CTCTTC	1 cut(s)	1659
Eco130I	CCWWGG	4 cut(s)	11, 622, 678, 918
Eco24I	GRGCYC	2 cut(s)	243, 1946
Eco31I	GGTCTC	2 cut(s)	77, 196
Eco47I	GGWCC	2 cut(s)	26, 170
Eco57I	CTGAAG	1 cut(s)	1299
Eco72I	CACGTG	1 cut(s)	884
Eco81I	CCTNAGG	1 cut(s)	1980
Eco88I	CYCGRG	1 cut(s)	1945
EcoNI	CCTNNNNNAGG	1 cut(s)	1494
EcoRII	CCWGG	5 cut(s)	197, 304, 995, 1495, 1603
EcoT14I	CCWWGG	4 cut(s)	11, 622, 678, 918
EcoT38I	GRGCYC	2 cut(s)	243, 1946
ErhI	CCWWGG	4 cut(s)	11, 622, 678, 918
Esp3I	CGTCTC	1 cut(s)	278
FalI	AAGNNNNNCTT	2 cut(s)	643, 675
FaqI	GGGAC	2 cut(s)	12, 770
FauI	CCCGC	2 cut(s)	37, 926
FauNDI	CATATG	1 cut(s)	862
FbaI	TGATCA	1 cut(s)	1042
FokI	GGATG	2 cut(s)	1013, 1708
FriOI	GRGCYC	2 cut(s)	243, 1946
FspBI	CTAG	6 cut(s)	12, 192, 641, 983, 1341, 1391
GlaI	GCGC	3 cut(s)	147, 565, 1488
GsuI	CTGGAG	4 cut(s)	220, 311, 1691, 1838
HaeII	RGCGCY	1 cut(s)	1490
HaeIII	GGCC	3 cut(s)	615, 891, 1782
HapII	CCGG	2 cut(s)	38, 875
HgaI	GACGC	2 cut(s)	260, 527
HhaI	GCGC	3 cut(s)	148, 566, 1489
Hin6I	GCGC	3 cut(s)	146, 564, 1487
HinP1I	GCGC	3 cut(s)	146, 564, 1487
HincII	GTYRAC	2 cut(s)	1290, 1600
HindII	GTYRAC	2 cut(s)	1290, 1600
HindIII	AAGCTT	1 cut(s)	1847
HinfI	GANTC	8 cut(s)	86, 482, 692, 803, 1477, 1541, 1702, 1997
HpaI	GTTAAC	1 cut(s)	1600
HpaII	CCGG	2 cut(s)	38, 875
HphI	GGTGA	7 cut(s)	638, 934, 1184, 1256, 1375, 1391, 1567
Hpy166II	GTNNAC	4 cut(s)	513, 1290, 1331, 1600
Hpy8I	GTNNAC	4 cut(s)	513, 1290, 1331, 1600
Hpy99I	CGWCG	2 cut(s)	80, 94
HpyAV	CCTTC	6 cut(s)	811, 1085, 1559, 1613, 1654, 1867
HpyCH4III	ACNGT	3 cut(s)	166, 493, 1071
HpyCH4IV	ACGT	6 cut(s)	102, 442, 883, 1327, 1417, 1894
HpyF10VI	GCNNNNNNNGC	8 cut(s)	154, 731, 1061, 1199, 1566, 1928, 1950, 1959
HpyF3I	CTNAG	9 cut(s)	475, 696, 799, 1545, 1656, 1712, 1838, 1909, 1980
HpySE526I	ACGT	6 cut(s)	102, 442, 883, 1327, 1417, 1894
HspAI	GCGC	3 cut(s)	146, 564, 1487
Ksp22I	TGATCA	1 cut(s)	1042
KspAI	GTTAAC	1 cut(s)	1600
Kzo9I	GATC	9 cut(s)	80, 301, 340, 628, 793, 826, 950, 1042, 1607
LguI	GCTCTTC	1 cut(s)	1659
LmnI	GCTCC	3 cut(s)	211, 399, 730
Lsp1109I	GCAGC	9 cut(s)	40, 43, 578, 753, 1036, 1039, 1802, 1891, 1906
LweI	GCATC	8 cut(s)	68, 332, 931, 1000, 1165, 1271, 1685, 1686
MaeI	CTAG	6 cut(s)	12, 192, 641, 983, 1341, 1391
MaeII	ACGT	6 cut(s)	102, 442, 883, 1327, 1417, 1894
MaeIII	GTNAC	6 cut(s)	551, 617, 782, 898, 1207, 1418
MalI	GATC	9 cut(s)	82, 303, 342, 630, 795, 828, 952, 1044, 1609
MboI	GATC	9 cut(s)	80, 301, 340, 628, 793, 826, 950, 1042, 1607
MboII	GAAGA	6 cut(s)	308, 491, 623, 1394, 1430, 1676
MfeI	CAATTG	1 cut(s)	1212
MflI	RGATCY	3 cut(s)	80, 340, 793
MhlI	GDGCHC	3 cut(s)	243, 404, 1946
MlsI	TGGCCA	1 cut(s)	1782
MluCI	AATT	8 cut(s)	113, 285, 360, 423, 1212, 1431, 1581, 1736
MluNI	TGGCCA	1 cut(s)	1782
MlyI	GAGTC	4 cut(s)	476, 1471, 1550, 1696
MmeI	TCCRAC	3 cut(s)	635, 737, 1732
Mox20I	TGGCCA	1 cut(s)	1782
MscI	TGGCCA	1 cut(s)	1782
MseI	TTAA	9 cut(s)	363, 647, 854, 1352, 1434, 1443, 1515, 1599, 1650
Msp20I	TGGCCA	1 cut(s)	1782
MspI	CCGG	2 cut(s)	38, 875
MspR9I	CCNGG	6 cut(s)	38, 199, 306, 997, 1497, 1605
MunI	CAATTG	1 cut(s)	1212
MvaI	CCWGG	5 cut(s)	199, 306, 997, 1497, 1605
MwoI	GCNNNNNNNGC	8 cut(s)	154, 731, 1061, 1199, 1566, 1928, 1950, 1959
NciI	CCSGG	1 cut(s)	38
NdeI	CATATG	1 cut(s)	862
NdeII	GATC	9 cut(s)	80, 301, 340, 628, 793, 826, 950, 1042, 1607
NheI	GCTAGC	1 cut(s)	1340
NlaIV	GGNNCC	4 cut(s)	28, 247, 795, 1073
NmuCI	GTSAC	2 cut(s)	782, 1207
NspI	RCATGY	5 cut(s)	1064, 1103, 1127, 1202, 1288
PaeI	GCATGC	1 cut(s)	1064
PciI	ACATGT	1 cut(s)	1284
PciSI	GCTCTTC	1 cut(s)	1659
PfeI	GAWTC	4 cut(s)	86, 692, 803, 1997
PflFI	GACNNNGTC	1 cut(s)	661
PflMI	CCANNNNNTGG	2 cut(s)	843, 1193
PinAI	ACCGGT	1 cut(s)	874
PleI	GAGTC	4 cut(s)	476, 1471, 1549, 1696
PmaCI	CACGTG	1 cut(s)	884
PmlI	CACGTG	1 cut(s)	884
PpsI	GAGTC	4 cut(s)	476, 1471, 1549, 1696
Ppu21I	YACGTR	1 cut(s)	884
PscI	ACATGT	1 cut(s)	1284
PshBI	ATTAAT	2 cut(s)	363, 1434
Psp6I	CCWGG	5 cut(s)	197, 304, 995, 1495, 1603
PspCI	CACGTG	1 cut(s)	884
PspGI	CCWGG	5 cut(s)	197, 304, 995, 1495, 1603
PspN4I	GGNNCC	4 cut(s)	28, 247, 795, 1073
PspPI	GGNCC	2 cut(s)	26, 170
PstI	CTGCAG	1 cut(s)	1057
PstNI	CAGNNNCTG	1 cut(s)	344
PsuI	RGATCY	3 cut(s)	80, 340, 793
PsyI	GACNNNGTC	1 cut(s)	661
RsaI	GTAC	5 cut(s)	1278, 1332, 1389, 1575, 1757
RsaNI	GTAC	5 cut(s)	1277, 1331, 1388, 1574, 1756
SapI	GCTCTTC	1 cut(s)	1659
SaqAI	TTAA	9 cut(s)	363, 647, 854, 1352, 1434, 1443, 1515, 1599, 1650
Sau3AI	GATC	9 cut(s)	80, 301, 340, 628, 793, 826, 950, 1042, 1607
Sau96I	GGNCC	2 cut(s)	26, 170
SchI	GAGTC	4 cut(s)	476, 1471, 1550, 1696
ScrFI	CCNGG	6 cut(s)	38, 199, 306, 997, 1497, 1605
SduI	GDGCHC	3 cut(s)	243, 404, 1946
SfaNI	GCATC	8 cut(s)	68, 332, 931, 1000, 1165, 1271, 1685, 1686
SfcI	CTRYAG	3 cut(s)	165, 1053, 1868
SinI	GGWCC	2 cut(s)	26, 170
SpeI	ACTAGT	1 cut(s)	1390
SphI	GCATGC	1 cut(s)	1064
Sse9I	AATT	8 cut(s)	113, 285, 360, 423, 1212, 1431, 1581, 1736
SsiI	CCGC	4 cut(s)	30, 933, 1092, 1242
SspMI	CTAG	6 cut(s)	12, 192, 641, 983, 1341, 1391
StyD4I	CCNGG	6 cut(s)	36, 197, 304, 995, 1495, 1603
StyI	CCWWGG	4 cut(s)	11, 622, 678, 918
TaaI	ACNGT	3 cut(s)	166, 493, 1071
TaiI	ACGT	6 cut(s)	105, 445, 886, 1330, 1420, 1897
TaqI	TCGA	5 cut(s)	75, 110, 317, 1113, 1881
TaqII	GACCGA	2 cut(s)	59, 1294
TasI	AATT	8 cut(s)	113, 285, 360, 423, 1212, 1431, 1581, 1736
TatI	WGTACW	3 cut(s)	1276, 1387, 1755
TauI	GCSGC	1 cut(s)	1095
TfiI	GAWTC	4 cut(s)	86, 692, 803, 1997
Tru1I	TTAA	9 cut(s)	363, 647, 854, 1352, 1434, 1443, 1515, 1599, 1650
Tru9I	TTAA	9 cut(s)	363, 647, 854, 1352, 1434, 1443, 1515, 1599, 1650
TscAI	CASTG	4 cut(s)	213, 515, 1062, 1686
TseFI	GTSAC	2 cut(s)	782, 1207
TseI	GCWGC	9 cut(s)	53, 56, 566, 766, 1049, 1052, 1790, 1904, 1919
Tsp45I	GTSAC	2 cut(s)	782, 1207
TspDTI	ATGAA	3 cut(s)	623, 1359, 1940
TspGWI	ACGGA	2 cut(s)	93, 446
TspRI	CASTG	4 cut(s)	213, 515, 1062, 1686
Tth111I	GACNNNGTC	1 cut(s)	661
Van91I	CCANNNNNTGG	2 cut(s)	843, 1193
VpaK11BI	GGWCC	2 cut(s)	26, 170
VspI	ATTAAT	2 cut(s)	363, 1434
XagI	CCTNNNNNAGG	1 cut(s)	1494
XapI	RAATTY	2 cut(s)	113, 285
XbaI	TCTAGA	1 cut(s)	640
XceI	RCATGY	5 cut(s)	1064, 1103, 1127, 1202, 1288
XmaJI	CCTAGG	1 cut(s)	11
XspI	CTAG	6 cut(s)	12, 192, 641, 983, 1341, 1391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.