Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0007134

Physical Location & Seq

Genomic Coordinates Reverse (-)

28838014 .. 28843952

Gene Structure 5939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1202500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGGCTATGGCTCGGGCGAGCTCGGGGCTCCAATACCCCCAGAGGTTTTACGCGGCGGCCTCCTACGCCGGCTTCGACGGATCTCCTCGCTCCGCCTCCAAAGCCGTTCGCGCCAAGTTCAGCTCCGAGTCCGCTCTCATACTCTACGCCTTGTATCAGCAGGCTACCGTAGGGCCTTGTAATGCCCCGGAACCTAGCGCTTGGAATGCTGTTGAGAAAAGCAAATGGAGCAGCTGGAAGAAGCTTGCAGACATGGCTTCCACTGAAGCAATGCGTCTTTTTGTGAAAATATTAGAGGAGGAAGACCCAGGTTGGTATTCAAGAGCATCAAACTTTGTTTCAGAGCCTGTGGTAGATGTACAAATGAATCAAAATTCAAGTATTCAGCCAGTTGTCGAGAATGGTAACTCTTTTCCCGAGACCAAGACAATCTCCACTGAAAACGGGAGCATAGTGGAAGCTCAGGATAAAGATGTTGTCTCTGAAGGCTTTGGATCAGTTGTTGTCTATGATCAATGGACTGCACCTCCAGTATCTGGCCTTCGCCCAAAATCCCGATATGAGCATGGAGCAGCGGTTATTCAAGACAAGATGTACATACATGGTGGAAATCACAATGGTCGTTACCTAAATGATCTCCATGTCTTGGACTTGAGGAGTTGGAGTTGGTCAAAGATCGAGGCCAAATCTGTGGCTGAGTCAGTTGAGGCAGCCTCACCGGTAACAGTAACCCCATGCGCCGGTCATTCGTTGATACCTTGGGAGAATAAACTTATTTCAATTGCTGGACATACAAAGGATCCTACTGATTCTATTCAGGTGAAGGCATTTGATCTACAAACTTGCTCGTGGTCATTGTTAAAGACTTATGGGAAACCGCCGGCATCGCGTGGAGGTCAATCCGTGTCTCTTGTTGGAGGTAACTTGGTTATTTTCGGGGGACAAGATGCAAAGAGATCTCTCTTGAATGACCTGCATATTCTTGACCTAGAAACAATGACGTGGGATGAGATTGATGCTGTAGGGGTGCCTCCTTCTCCGAGGTCTGATCATGCTGCTGCGGTCCATGCTGACCGCTATCTTCTTATATTTGGTGGTGGTTCTCATGCCACTTGTTACAATGATCTCCATGTCCTTGATTTGCAAAGTATGGAGTGGTCAAGACCCACACAACAAGGTGAAATACCAACTCCACGGGCTGGACATGCAGGTGTAACTGTTGGAGAGAATTGGTTCATAGTTGGCGGTGGTGACAACAAGAGTGGCGTTTCAGAAACTGTTGTCCTAAATATGTCCACGCTTGTTTGGTCTGTTGTAACTACTGTTGAAGGGCGCATTCCTGTTGCTAGTGAGGGACTAAGTCTGGTCGTAGGTTCTTACAATGGTGAAGATGTCCTCGTATCATTTGGAGGATACAATGGGCGTTACAACAATGAGGTTAACGTTCTTAAACCAAGCCACAAGTCAACCTTGCAATCAAAGATGACGGAAACTCCTGTTCCAGACAGTGTTTCTGCTGTGCATAATCAAAGTGCTACCAGAGATTTGGAGTCTGAAACAGGGCAAGAAGGAAAAGTTAGGGAAATTGAAATGGACAATGTTGACTCAGATGCCATGAAATCAAGAGGCAAGGGTACCAATGAACATATAGCGACCCTCAAATCAGAGAAAGAAGAATTAGAATCATCACTCAGCAAGGAGAAAGCGCAAACTCTCCAATTAAAGCAAGATTTAGCAGAAGCAGAGACTCGCAACACTGACCTGTACAAGGAGCTTCAATCAGTACGTGGTCAACTAGGATCTGAGCAGTCAAGATGTTTCAAACTTGAGGTTGAACTTGCAGAACTACGACAGAAGCTCCAAACAATGGACGCATTGCAGAAAGAACTTGAACTCCTCCAGCGACAAAAGGCTGCATCTGAACAAGCAGCACTAAATGCTAAAAAGCAGAGCTCAGGTGGCGTCTGGGGCTGGCTCGCGGGAACCCCTTCTAATGAAAAAGCTGATGACGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000062 GO:0000166 GO:0001101 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0006869 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009753 GO:0010033 GO:0010876 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033218 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0051179 GO:0051234 GO:0071702 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901567 GO:1901681 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ACBP Kelch_3 Kelch_4 Kelch_5 Kelch_6

Protein Analysis

672

Amino Acids

72.99

Weight (kDa)

5.32

Isoelectric Point (pI)

48.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ACBP	PF00887	33 - 97	1.1e-18	Acyl CoA binding protein
Beta-prop_FBX42	PF13415	166 - 230	4.6e-11	FBX42, beta-propeller domain
Kelch_HCF	PF13854	170 - 366	2.4e-20	Host cell factor, Kelch-repeats domain
Beta-prop_ATRN-LZTR1	PF24981	171 - 302	1.2e-16	Attractin/LZTR1 beta-propeller
Kelch_KLHDC2_KLHL20_DRC7	PF24681	172 - 234	1.2e-15	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_1	PF01344	186 - 226	1.8e-08	Kelch motif
Beta-prop_FBX42	PF13415	245 - 368	1.4e-23	FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	248 - 471	3.9e-57	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_ATRN-LZTR1	PF24981	261 - 369	5.1e-13	Attractin/LZTR1 beta-propeller
Beta-prop_ATRN-LZTR1	PF24981	310 - 483	2.3e-21	Attractin/LZTR1 beta-propeller
Beta-prop_FBX42	PF13415	351 - 498	7.6e-22	FBX42, beta-propeller domain
Kelch_HCF	PF13854	360 - 416	2.5e-07	Host cell factor, Kelch-repeats domain
Kelch_HCF	PF13854	392 - 487	2.7e-06	Host cell factor, Kelch-repeats domain
ACBP4_C	PF24922	548 - 650	2.6e-40	Acyl-CoA-binding domain-containing protein 4-6, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05420 AT3G05420 AT5G27630 AT5G27630 AT5G27630 AT5G27630
fragaria_vesca	FvH4_6g06301 FvH4_6g06301 FvH4_6g06301
malus_domestica	MD04G1202500.v1.1 MD12G1216500.v1.1
prunus_persica	Prupe.6G322800_v2.0.a1 Prupe.6G322800_v2.0.a1
pyrus_communis	pycom04g17870 pycom12g20200
rosa_chinensis	RchiOBHm_Chr3g0455341
rosa_laevigata	RLG00000025368
rosa_multiflora	Rmu_sc0002169.1_g000045 Rmu_sc0024960.1_g000003
rosa_roxburghii	Rroxscaffold_6G00424350
rosa_rugosa	Rorug03G0006600 Rorug03G0006700
rosa_samantha	Rh3CG066800 Rh3DG068300
rosa_wichuraiana	Rw3G005220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1199
Acc36I	ACCTGC	2 cut(s)	981, 1199
Acc65I	GGTACC	1 cut(s)	1634
AccB1I	GGYRCC	2 cut(s)	1027, 1634
AccB7I	CCANNNNNTGG	4 cut(s)	536, 646, 1199, 1867
AccBSI	CCGCTC	1 cut(s)	134
AccII	CGCG	4 cut(s)	53, 111, 889, 1979
AclI	AACGTT	1 cut(s)	1443
AclWI	GGATC	5 cut(s)	88, 502, 794, 807, 1807
AcsI	RAATTY	1 cut(s)	373
AcuI	CTGAAG	2 cut(s)	285, 504
AcyI	GRCGYC	2 cut(s)	1962, 2010
AfaI	GTAC	5 cut(s)	360, 596, 1636, 1766, 1785
AfeI	AGCGCT	1 cut(s)	199
AfiI	CCNNNNNNNGG	6 cut(s)	536, 646, 740, 1199, 1768, 1867
AgeI	ACCGGT	1 cut(s)	718
AjiI	CACGTC	1 cut(s)	1002
AjnI	CCWGG	1 cut(s)	307
AloI	GAACNNNNNNTCC	2 cut(s)	1878, 1910
AluBI	AGCT	9 cut(s)	21, 123, 234, 244, 461, 1774, 1858, 1953, 2003
AluI	AGCT	9 cut(s)	21, 123, 234, 244, 461, 1774, 1858, 1953, 2003
Alw21I	GWGCWC	2 cut(s)	23, 1955
Alw26I	GTCTC	4 cut(s)	413, 484, 912, 1739
AlwI	GGATC	5 cut(s)	88, 502, 794, 807, 1807
AlwNI	CAGNNNCTG	3 cut(s)	347, 536, 1277
Ama87I	CYCGRG	3 cut(s)	12, 22, 416
Aor51HI	AGCGCT	1 cut(s)	199
AoxI	GGCC	4 cut(s)	57, 173, 538, 681
ApeKI	GCWGC	7 cut(s)	231, 572, 710, 1055, 1058, 1913, 1928
ApoI	RAATTY	1 cut(s)	373
AsiGI	ACCGGT	1 cut(s)	718
Asp700I	GAANNNNTTC	2 cut(s)	1232, 1987
Asp718I	GGTACC	1 cut(s)	1634
AspLEI	GCGC	5 cut(s)	113, 200, 740, 1335, 1708
AspS9I	GGNCC	2 cut(s)	173, 1063
AsuC2I	CCSGG	1 cut(s)	188
AsuHPI	GGTGA	5 cut(s)	708, 832, 1190, 1262, 1397
AvaI	CYCGRG	3 cut(s)	12, 22, 416
AvaII	GGWCC	1 cut(s)	1063
BamHI	GGATCC	1 cut(s)	799
BanI	GGYRCC	2 cut(s)	1027, 1634
BanII	GRGCYC	3 cut(s)	23, 30, 1955
BarI	GAAGNNNNNNTAC	2 cut(s)	525, 557
BauI	CACGAG	1 cut(s)	847
BbsI	GAAGAC	1 cut(s)	309
Bbv12I	GWGCWC	2 cut(s)	23, 1955
BbvI	GCAGC	7 cut(s)	243, 584, 722, 1042, 1045, 1900, 1940
BceAI	ACGGC	1 cut(s)	89
BciT130I	CCWGG	1 cut(s)	309
BciVI	GTATCC	1 cut(s)	1406
BclI	TGATCA	2 cut(s)	511, 1048
BcnI	CCSGG	1 cut(s)	188
BcoDI	GTCTC	4 cut(s)	413, 484, 912, 1739
BfaI	CTAG	4 cut(s)	195, 989, 1347, 1796
BfmI	CTRYAG	1 cut(s)	1020
BfoI	RGCGCY	1 cut(s)	201
BfuAI	ACCTGC	2 cut(s)	981, 1199
BfuI	GTATCC	1 cut(s)	1406
BglII	AGATCT	1 cut(s)	956
BisI	GCNGC	9 cut(s)	54, 57, 232, 573, 711, 1056, 1059, 1914, 1929
BlsI	GCNGC	9 cut(s)	55, 58, 233, 574, 712, 1057, 1060, 1915, 1930
Bme1390I	CCNGG	2 cut(s)	188, 309
Bme18I	GGWCC	1 cut(s)	1063
BmeT110I	CYCGRG	3 cut(s)	12, 22, 416
BmgBI	CACGTC	1 cut(s)	1002
BmgT120I	GGNCC	2 cut(s)	173, 1063
BmiI	GGNNCC	6 cut(s)	29, 192, 801, 1029, 1636, 1984
BmrFI	CCNGG	2 cut(s)	188, 309
BmsI	GCATC	6 cut(s)	335, 893, 937, 1006, 1600, 1925
BpiI	GAAGAC	1 cut(s)	309
BplI	GAGNNNNNCTC	2 cut(s)	698, 730
BpmI	CTGGAG	2 cut(s)	513, 1883
Bpu10I	CCTNAGC	2 cut(s)	462, 1954
BpuEI	CTTGAG	2 cut(s)	673, 1847
BpuMI	CCSGG	1 cut(s)	188
BsaAI	YACGTR	1 cut(s)	1787
BsaHI	GRCGYC	2 cut(s)	1962, 2010
BsaI	GGTCTC	1 cut(s)	413
BsaJI	CCNNGG	5 cut(s)	186, 307, 758, 1040, 1193
BsaWI	WCCGGW	1 cut(s)	718
Bsc4I	CCNNNNNNNGG	6 cut(s)	536, 646, 740, 1199, 1768, 1867
Bse118I	RCCGGY	4 cut(s)	68, 718, 740, 880
Bse1I	ACTGG	2 cut(s)	389, 530
Bse3DI	GCAATG	2 cut(s)	276, 1874
BseBI	CCWGG	1 cut(s)	309
BseDI	CCNNGG	5 cut(s)	186, 307, 758, 1040, 1193
BseGI	GGATG	1 cut(s)	1012
BseLI	CCNNNNNNNGG	6 cut(s)	536, 646, 740, 1199, 1768, 1867
BseMI	GCAATG	2 cut(s)	276, 1874
BseMII	CTCAG	6 cut(s)	476, 687, 1620, 1705, 1794, 1968
BseNI	ACTGG	2 cut(s)	389, 530
BseRI	GAGGAG	4 cut(s)	75, 311, 670, 1886
BseXI	GCAGC	7 cut(s)	243, 584, 722, 1042, 1045, 1900, 1940
BsgI	GTGCAG	1 cut(s)	507
Bsh1236I	CGCG	4 cut(s)	53, 111, 889, 1979
BshFI	GGCC	4 cut(s)	59, 175, 540, 683
BshNI	GGYRCC	2 cut(s)	1027, 1634
BshTI	ACCGGT	1 cut(s)	718
BsiHKAI	GWGCWC	2 cut(s)	23, 1955
BsiHKCI	CYCGRG	3 cut(s)	12, 22, 416
BsiSI	CCGG	5 cut(s)	69, 188, 719, 741, 881
BslFI	GGGAC	2 cut(s)	954, 1368
BslI	CCNNNNNNNGG	6 cut(s)	536, 646, 740, 1199, 1768, 1867
BsmAI	GTCTC	4 cut(s)	413, 484, 912, 1739
BsmFI	GGGAC	2 cut(s)	954, 1368
BsmI	GAATGC	2 cut(s)	211, 1335
BsnI	GGCC	4 cut(s)	59, 175, 540, 683
Bso31I	GGTCTC	1 cut(s)	413
BsoBI	CYCGRG	3 cut(s)	12, 22, 416
Bsp1286I	GDGCHC	3 cut(s)	23, 30, 1955
Bsp1407I	TGTACA	3 cut(s)	358, 594, 1764
BspANI	GGCC	4 cut(s)	59, 175, 540, 683
BspCNI	CTCAG	6 cut(s)	475, 688, 1619, 1704, 1795, 1967
BspFNI	CGCG	4 cut(s)	53, 111, 889, 1979
BspLI	GGNNCC	6 cut(s)	29, 192, 801, 1029, 1636, 1984
BspMI	ACCTGC	2 cut(s)	981, 1199
BspPI	GGATC	5 cut(s)	88, 502, 794, 807, 1807
BspT107I	GGYRCC	2 cut(s)	1027, 1634
BspTNI	GGTCTC	1 cut(s)	413
BsrBI	CCGCTC	1 cut(s)	134
BsrDI	GCAATG	2 cut(s)	276, 1874
BsrFI	RCCGGY	4 cut(s)	68, 718, 740, 880
BsrGI	TGTACA	3 cut(s)	358, 594, 1764
BsrI	ACTGG	2 cut(s)	389, 530
BssAI	RCCGGY	4 cut(s)	68, 718, 740, 880
BssECI	CCNNGG	5 cut(s)	186, 307, 758, 1040, 1193
BssNI	GRCGYC	2 cut(s)	1962, 2010
BssSI	CACGAG	1 cut(s)	847
BssT1I	CCWWGG	1 cut(s)	758
Bst2BI	CACGAG	1 cut(s)	847
Bst2UI	CCWGG	1 cut(s)	309
Bst4CI	ACNGT	6 cut(s)	169, 727, 1219, 1279, 1324, 1508
BstACI	GRCGYC	2 cut(s)	1962, 2010
BstAPI	GCANNNNNTGC	1 cut(s)	1937
BstAUI	TGTACA	3 cut(s)	358, 594, 1764
BstBAI	YACGTR	1 cut(s)	1787
BstC8I	GCNNGC	7 cut(s)	19, 70, 162, 246, 882, 1973, 1977
BstDEI	CTNAG	7 cut(s)	462, 696, 1358, 1606, 1691, 1803, 1954
BstDSI	CCRYGG	1 cut(s)	1193
BstENI	CCTNNNNNAGG	1 cut(s)	1766
BstF5I	GGATG	1 cut(s)	1012
BstFNI	CGCG	4 cut(s)	53, 111, 889, 1979
BstH2I	RGCGCY	1 cut(s)	201
BstHHI	GCGC	5 cut(s)	113, 200, 740, 1335, 1708
BstMAI	GTCTC	4 cut(s)	413, 484, 912, 1739
BstNI	CCWGG	1 cut(s)	309
BstNSI	RCATGY	1 cut(s)	1208
BstSCI	CCNGG	2 cut(s)	186, 307
BstSFI	CTRYAG	1 cut(s)	1020
BstUI	CGCG	4 cut(s)	53, 111, 889, 1979
BstV1I	GCAGC	7 cut(s)	243, 584, 722, 1042, 1045, 1900, 1940
BstV2I	GAAGAC	1 cut(s)	309
BstX2I	RGATCY	4 cut(s)	80, 799, 956, 1799
BstXI	CCANNNNNNTGG	2 cut(s)	691, 1546
BstYI	RGATCY	4 cut(s)	80, 799, 956, 1799
BsuI	GTATCC	1 cut(s)	1406
BsuRI	GGCC	4 cut(s)	59, 175, 540, 683
BtgI	CCRYGG	1 cut(s)	1193
BtgZI	GCGATG	1 cut(s)	870
BtrI	CACGTC	1 cut(s)	1002
BtsCI	GGATG	1 cut(s)	1012
BtsIMutI	CAGTG	4 cut(s)	261, 435, 1513, 1755
BveI	ACCTGC	2 cut(s)	981, 1199
Cac8I	GCNNGC	7 cut(s)	19, 70, 162, 246, 882, 1973, 1977
CaiI	CAGNNNCTG	3 cut(s)	347, 536, 1277
CfoI	GCGC	5 cut(s)	113, 200, 740, 1335, 1708
Cfr10I	RCCGGY	4 cut(s)	68, 718, 740, 880
Cfr13I	GGNCC	2 cut(s)	173, 1063
CseI	GACGC	3 cut(s)	263, 1880, 1951
Csp6I	GTAC	5 cut(s)	359, 595, 1635, 1765, 1784
CspAI	ACCGGT	1 cut(s)	718
CspCI	CAANNNNNGTGG	2 cut(s)	1243, 1278
CviQI	GTAC	5 cut(s)	359, 595, 1635, 1765, 1784
DdeI	CTNAG	7 cut(s)	462, 696, 1358, 1606, 1691, 1803, 1954
EciI	GGCGGA	1 cut(s)	82
Ecl136II	GAGCTC	2 cut(s)	21, 1953
Eco130I	CCWWGG	1 cut(s)	758
Eco24I	GRGCYC	3 cut(s)	23, 30, 1955
Eco31I	GGTCTC	1 cut(s)	413
Eco47I	GGWCC	1 cut(s)	1063
Eco47III	AGCGCT	1 cut(s)	199
Eco53kI	GAGCTC	2 cut(s)	21, 1953
Eco57I	CTGAAG	2 cut(s)	285, 504
Eco88I	CYCGRG	3 cut(s)	12, 22, 416
EcoICRI	GAGCTC	2 cut(s)	21, 1953
EcoNI	CCTNNNNNAGG	1 cut(s)	1766
EcoO109I	RGGNCCY	1 cut(s)	173
EcoRII	CCWGG	1 cut(s)	307
EcoT14I	CCWWGG	1 cut(s)	758
EcoT38I	GRGCYC	3 cut(s)	23, 30, 1955
ErhI	CCWWGG	1 cut(s)	758
FalI	AAGNNNNNCTT	2 cut(s)	1454, 1486
FaqI	GGGAC	2 cut(s)	954, 1368
FauI	CCCGC	1 cut(s)	1972
FbaI	TGATCA	2 cut(s)	511, 1048
Fnu4HI	GCNGC	9 cut(s)	54, 57, 232, 573, 711, 1056, 1059, 1914, 1929
FokI	GGATG	1 cut(s)	1019
FriOI	GRGCYC	3 cut(s)	23, 30, 1955
Fsp4HI	GCNGC	9 cut(s)	54, 57, 232, 573, 711, 1056, 1059, 1914, 1929
FspBI	CTAG	4 cut(s)	195, 989, 1347, 1796
GlaI	GCGC	5 cut(s)	112, 199, 739, 1334, 1707
GluI	GCNGC	9 cut(s)	54, 57, 232, 573, 711, 1056, 1059, 1914, 1929
GsuI	CTGGAG	2 cut(s)	513, 1883
HaeII	RGCGCY	1 cut(s)	201
HaeIII	GGCC	4 cut(s)	59, 175, 540, 683
HapII	CCGG	5 cut(s)	69, 188, 719, 741, 881
HgaI	GACGC	3 cut(s)	263, 1880, 1951
HhaI	GCGC	5 cut(s)	113, 200, 740, 1335, 1708
Hin1I	GRCGYC	2 cut(s)	1962, 2010
Hin6I	GCGC	5 cut(s)	111, 198, 738, 1333, 1706
HinP1I	GCGC	5 cut(s)	111, 198, 738, 1333, 1706
HincII	GTYRAC	4 cut(s)	1441, 1467, 1603, 1793
HindII	GTYRAC	4 cut(s)	1441, 1467, 1603, 1793
HindIII	AAGCTT	1 cut(s)	242
HinfI	GANTC	8 cut(s)	128, 367, 698, 809, 1550, 1604, 1682, 1747
HpaI	GTTAAC	1 cut(s)	1441
HpaII	CCGG	5 cut(s)	69, 188, 719, 741, 881
HphI	GGTGA	5 cut(s)	708, 832, 1190, 1262, 1397
Hpy166II	GTNNAC	5 cut(s)	1296, 1441, 1467, 1603, 1793
Hpy8I	GTNNAC	5 cut(s)	1296, 1441, 1467, 1603, 1793
Hpy99I	CGWCG	1 cut(s)	80
HpyAV	CCTTC	7 cut(s)	479, 551, 817, 1044, 1322, 1562, 1998
HpyCH4III	ACNGT	6 cut(s)	169, 727, 1219, 1279, 1324, 1508
HpyCH4IV	ACGT	3 cut(s)	1001, 1443, 1786
HpyF3I	CTNAG	7 cut(s)	462, 696, 1358, 1606, 1691, 1803, 1954
HpySE526I	ACGT	3 cut(s)	1001, 1443, 1786
Hsp92I	GRCGYC	2 cut(s)	1962, 2010
HspAI	GCGC	5 cut(s)	111, 198, 738, 1333, 1706
KpnI	GGTACC	1 cut(s)	1638
KroI	GCCGGC	2 cut(s)	68, 880
KroNI	GCCGGC	2 cut(s)	70, 882
Ksp22I	TGATCA	2 cut(s)	511, 1048
KspAI	GTTAAC	1 cut(s)	1441
LmnI	GCTCC	8 cut(s)	33, 95, 128, 228, 447, 569, 1771, 1863
Lsp1109I	GCAGC	7 cut(s)	243, 584, 722, 1042, 1045, 1900, 1940
LweI	GCATC	6 cut(s)	335, 893, 937, 1006, 1600, 1925
MaeI	CTAG	4 cut(s)	195, 989, 1347, 1796
MaeII	ACGT	3 cut(s)	1001, 1443, 1786
MbiI	CCGCTC	1 cut(s)	134
MboII	GAAGA	5 cut(s)	250, 314, 1073, 1400, 1685
MfeI	CAATTG	1 cut(s)	780
MflI	RGATCY	4 cut(s)	80, 799, 956, 1799
MhlI	GDGCHC	3 cut(s)	23, 30, 1955
MluCI	AATT	6 cut(s)	373, 780, 1228, 1584, 1676, 1718
MlyI	GAGTC	5 cut(s)	137, 707, 1559, 1598, 1741
MmeI	TCCRAC	3 cut(s)	641, 895, 1201
MroNI	GCCGGC	2 cut(s)	68, 880
MroXI	GAANNNNTTC	2 cut(s)	1232, 1987
MseI	TTAA	4 cut(s)	860, 1440, 1449, 1721
MslI	CAYNNNNRTG	1 cut(s)	1209
MspA1I	CMGCKG	2 cut(s)	234, 575
MspI	CCGG	5 cut(s)	69, 188, 719, 741, 881
MspR9I	CCNGG	2 cut(s)	188, 309
MunI	CAATTG	1 cut(s)	780
Mva1269I	GAATGC	2 cut(s)	211, 1335
MvaI	CCWGG	1 cut(s)	309
MvnI	CGCG	4 cut(s)	53, 111, 889, 1979
NaeI	GCCGGC	2 cut(s)	70, 882
NciI	CCSGG	1 cut(s)	188
NgoMIV	GCCGGC	2 cut(s)	68, 880
NlaIV	GGNNCC	6 cut(s)	29, 192, 801, 1029, 1636, 1984
NmuCI	GTSAC	1 cut(s)	1250
NspI	RCATGY	1 cut(s)	1208
PaqCI	CACCTGC	1 cut(s)	1199
PcsI	WCGNNNNNNNCGW	1 cut(s)	72
PctI	GAATGC	2 cut(s)	211, 1335
PdiI	GCCGGC	2 cut(s)	70, 882
PdmI	GAANNNNTTC	2 cut(s)	1232, 1987
PfeI	GAWTC	3 cut(s)	367, 809, 1682
PflFI	GACNNNGTC	1 cut(s)	1359
PflMI	CCANNNNNTGG	4 cut(s)	536, 646, 1199, 1867
PinAI	ACCGGT	1 cut(s)	718
PkrI	GCNGC	9 cut(s)	55, 58, 233, 574, 712, 1057, 1060, 1915, 1930
PleI	GAGTC	5 cut(s)	136, 706, 1558, 1598, 1741
PpsI	GAGTC	5 cut(s)	136, 706, 1558, 1598, 1741
Ppu21I	YACGTR	1 cut(s)	1787
Psp124BI	GAGCTC	2 cut(s)	23, 1955
Psp1406I	AACGTT	1 cut(s)	1443
Psp6I	CCWGG	1 cut(s)	307
PspGI	CCWGG	1 cut(s)	307
PspN4I	GGNNCC	6 cut(s)	29, 192, 801, 1029, 1636, 1984
PspPI	GGNCC	2 cut(s)	173, 1063
PstNI	CAGNNNCTG	3 cut(s)	347, 536, 1277
PsuI	RGATCY	4 cut(s)	80, 799, 956, 1799
PsyI	GACNNNGTC	1 cut(s)	1359
PvuII	CAGCTG	1 cut(s)	234
RsaI	GTAC	5 cut(s)	360, 596, 1636, 1766, 1785
RsaNI	GTAC	5 cut(s)	359, 595, 1635, 1765, 1784
RseI	CAYNNNNRTG	1 cut(s)	1209
SacI	GAGCTC	2 cut(s)	23, 1955
SaqAI	TTAA	4 cut(s)	860, 1440, 1449, 1721
SatI	GCNGC	9 cut(s)	54, 57, 232, 573, 711, 1056, 1059, 1914, 1929
Sau96I	GGNCC	2 cut(s)	173, 1063
SchI	GAGTC	5 cut(s)	137, 707, 1559, 1598, 1741
ScrFI	CCNGG	2 cut(s)	188, 309
SduI	GDGCHC	3 cut(s)	23, 30, 1955
SfaNI	GCATC	6 cut(s)	335, 893, 937, 1006, 1600, 1925
SfcI	CTRYAG	1 cut(s)	1020
SinI	GGWCC	1 cut(s)	1063
SmiMI	CAYNNNNRTG	1 cut(s)	1209
SmlI	CTYRAG	2 cut(s)	652, 1826
SmoI	CTYRAG	2 cut(s)	652, 1826
Sse9I	AATT	6 cut(s)	373, 780, 1228, 1584, 1676, 1718
SspI	AATATT	1 cut(s)	291
SspMI	CTAG	4 cut(s)	195, 989, 1347, 1796
SstI	GAGCTC	2 cut(s)	23, 1955
StyD4I	CCNGG	2 cut(s)	186, 307
StyI	CCWWGG	1 cut(s)	758
TaaI	ACNGT	6 cut(s)	169, 727, 1219, 1279, 1324, 1508
TaiI	ACGT	3 cut(s)	1004, 1446, 1789
TaqI	TCGA	3 cut(s)	75, 396, 678
TasI	AATT	6 cut(s)	373, 780, 1228, 1584, 1676, 1718
TatI	WGTACW	3 cut(s)	358, 594, 1764
TauI	GCSGC	2 cut(s)	56, 59
TfiI	GAWTC	3 cut(s)	367, 809, 1682
Tru1I	TTAA	4 cut(s)	860, 1440, 1449, 1721
Tru9I	TTAA	4 cut(s)	860, 1440, 1449, 1721
TscAI	CASTG	4 cut(s)	268, 442, 1513, 1762
TseFI	GTSAC	1 cut(s)	1250
TseI	GCWGC	7 cut(s)	231, 572, 710, 1055, 1058, 1913, 1928
Tsp45I	GTSAC	1 cut(s)	1250
TspDTI	ATGAA	5 cut(s)	380, 1225, 1631, 1656, 2010
TspGWI	ACGGA	3 cut(s)	93, 892, 1502
TspRI	CASTG	4 cut(s)	268, 442, 1513, 1762
Tth111I	GACNNNGTC	1 cut(s)	1359
Van91I	CCANNNNNTGG	4 cut(s)	536, 646, 1199, 1867
VpaK11BI	GGWCC	1 cut(s)	1063
XagI	CCTNNNNNAGG	1 cut(s)	1766
XapI	RAATTY	1 cut(s)	373
XceI	RCATGY	1 cut(s)	1208
XmnI	GAANNNNTTC	2 cut(s)	1232, 1987
XspI	CTAG	4 cut(s)	195, 989, 1347, 1796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.