AT3G05430

PWWP domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0010008
Physical Location & Seq
Forward (+)
1567624 .. 1571218
3595 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G05430.2

Sequence Viewer

Length: 2898 bp
ATGAATTCGGCTGAGGTGAATGTGAATCCTAGGGTTTTTGGTGATAGTTTCGTTACTTTTTCTGGCAATGGCTCCGGGAAATTTGAAATGATTGATCAGGCCGAAGCTTTCCTTATGGAGCTTGATTCGGTTGCTGCAGACACTGGAAGTGATGGAAATGGAAATGTCGATTTAGGTTCTCGAGTGTCTAACAGTGAAACGGAACCTAGATTTTGTGAAATGAAAAGAGAGATTAGAGACTCTGATCACCGATTTTATGAGCTCTGCAACGAATCTGGTGAGAAGAAAATGGAGAAAAGGCGAGTTCCGGACTACAAATCTTTCTTATCCGAATTTGACGATTATGTTGCGAGGGAGAAAATGGGTTCTAGAAATTCGAAGGCATTGAGCTATGGTTTTGAAGTGGGAGATATGGTTTGGGGAAAGGTAAAGTCACATCCATGGTGGCCAGGTCAAATATTCAATGAAGCTTTTGCGTCTCCCTCTGTTCGTCGTGTGAAGAAGATGGGTTACGTTCTGGTTGCTTTCTTTGGGGATAATAGTTATGGATGGTTCGATCCTGCTGAGCTTATCCCTTTTGAACCTCATGTGAAGGAGAAATCACAGCAAACTAGTTCGGATCACTTTGCAAAAGCTGTGGAAGAAGCTATGAATGAAGTAGGTAGAAGGTCAGCTCTTGGCTTGACTTGTAAATGTCGGAATCAGTATAACTTTAGGCCTATTAATGCTCAAGGTTACTTTGCTGTAGACGTGCCTGATTACGAGGTCCAAGCTATTTACTCTTCTAAGCAGATTCAGAAAGCTAGGGATAGTTTTTCATCTGTGCAAACTCTAGCTTTTGTGAAGCGGTGTGCATTAGCACCTCAAGAGTGTGATACAGACAGCTTAAAGTCTTTCCAGAAGAAAGTAGCGGTTTGTGCATTCCGTAGAGCAGTGTTTGAGGAGTTTGATGAAACATATGAACAAGCTTTCAGGGCAAGATCTGTATACTGTTTAATGAAGACACATGAACCACTTAATAGAGCACCCCTTCGAGTCCCCTTGAGTGGCTCATTGGTCAGTGCAGAAACTCTGGGCAACCCAAAGAGCTACACAAAAGCTATGAATGTAAAGGATTCTACTAAACAAGACAAATATCTTCCAAAAAGAAGAGAAGAAGCTGGTGATATGACAGTTCAATTTGGCCAGGTCCAAGAATCTTCTCAGTTTCAGGGCATCAACGGATCTTCAGCTTGGGATCGTCTACTCCAGAGAAGGACTCCATGTCTCCAAACTCCCAGGAAACATGAGCAGACTGGGCTTGTCAGCATGAACTTCACCTCTTCAAGTGGTAATATTCCTGGAAAGAAATCCTCTGTTTCAAAGCTCTCTCGTGATGATGACAAGGGTTTAGCTCAAGAGTCAGATGTGAGAATGGGAGAAAAAGCAACTCTATTTCCAGATCAGGAGAAATTTGAACCAATGAAAAGCCTTAAACAAGATGAGACTGGAACAAATTCTAGATCTAACAAAAGCTCTCTCAAGCTTTTTAGTGGTGGGAAATTTTCTGCAGGAGTTGGGATCAAGAAAGGCAATGTCGTGAAACGGTCTTCTGGCGAAATGAAATCTGAGAATTGTCCTCCAGAACCAAAGAAAAAGAAGAAAGAGTATGTGTCAGAGCTGAACCGTGACACTCCAGATAAGAGGAAAGCGTTATCTTCTGGAGAAGCTTGGGCCAAGAAATCGTCACAAGTAGATTCAGCAAAGAGACGCTCCAATATGTTGATAGTGAAACTTGATGGTCTGCAGCTGTTGAGTAATTTGCTAGCTCTCTCGCTTGACCCTCTCTTTGGATCCTCAGATAGAAGTTCTTTTAGAGTTATAAGGCAGTTCTTTTTTCATTTCCGATCACATGTTTACCAGAAAAGCTTGGCCACATCTCCTTCCGCAACAAAACTGTCAAAATCTGCAAAGACTTTGTGCAGAGCTAATGAACAATCAAAGGCTGGGAGAAACCGCATATCGTCTGACAGTCAACAAGATGTCCCATCAACTAAGAAGCTAAAGAAAACCATTCAGTTCAAACCACTGGCTTCTGACAAGAAAACAAACCAAGATGCAACAAAGAGATCAAGTCTTGCACCTTTAAATCCAGTAAGAGACCAATGTCGAGTTCCCATCAATGCCAAACCAGCTATAGTTCAACAAGAAAAGAAGACGGGTCCATCTGCAATGGTAGTTGAGCCAACAATGCTGGTCATGATGTTTCCTCCTGGTGAATCTCTCCCTTCCATTGATCTGCTTAAGGCGAGGTTTGGACGCTTTGGACAGTTGGATCAATCAGCCATCAGAGTTTCCTGGAAATCCTCGATCTGCCGTGTTGGCTTCCTGTATAAACTCGATGCGCAGACTGCCTTAAGATATGTATCAGGAAGCAAATCTCTCTTTGGCAATGTGAATGTGACATACTTTCTCCGTGACATGAAAGCTTCTTCTGCATCCGGAGATCATGAACTGAAGAAAGCCAAGAGGCCCAAGACAGACAAACCCATCACTAAACCATTGAACCAGCTACTAGAGCAAGCACCGCCGGTTCACCAACCAAACATCCAGCTCAAGTCTTGTTTGAAAAAACCAGGCAATAACCGTAATGGTAACCACAGAACAGTACGAGTGAAATTCATGTTGGGTGAGAAAGAAACAGAGTCACCATTTTCGGTTTCGATTCTTCCTCTCTCTTCACAAGACTCAGAACCAAAGCCTGTAAATAACCAAGTGGACCACGTCGAGCCACCACTAGACCCGTCACAGCTTAAGGTGGACATCTCCCTGCAGATGATGGAGCTGTTAACAAGGTGTAACGATGCTGTGGCCAACGTCACGGGTTTGTTGGGTTACGTCCCTTATCATTCCTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00270 ko01100 ko05206 map00270 map01100 map05206
Pfam Domains
Protein Families
PWWP

Protein Analysis

965

Amino Acids

107.9

Weight (kDa)

9.5

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 136 - 219 5.1e-20 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1862
Acc16I TGCGCA 1 cut(s) 2385
AccI GTMKAC 3 cut(s) 747, 987, 1243
AccIII TCCGGA 2 cut(s) 307, 2480
AciI CCGC 5 cut(s) 847, 911, 1926, 1996, 2567
AclWI GGATC 8 cut(s) 551, 627, 1231, 1245, 1568, 1827, 1840, 2322
AcoI YGGCCR 4 cut(s) 446, 1183, 1911, 2850
AcsI RAATTY 8 cut(s) 4, 80, 332, 373, 1451, 1495, 1541, 2657
AcuI CTGAAG 2 cut(s) 1212, 2516
AfaI GTAC 1 cut(s) 2649
AfiI CCNNNNNNNGG 2 cut(s) 1046, 1829
AflII CTTAAG 3 cut(s) 2282, 2395, 2792
AflIII ACRYGT 1 cut(s) 1891
AhdI GACNNNNNGTC 1 cut(s) 1263
AhlI ACTAGT 1 cut(s) 611
AjiI CACGTC 2 cut(s) 751, 2764
AjnI CCWGG 7 cut(s) 448, 1185, 1277, 1339, 2251, 2336, 2614
AjuI GAANNNNNNNTTGG 4 cut(s) 2136, 2168, 2648, 2680
Alw21I GWGCWC 2 cut(s) 264, 1027
Alw26I GTCTC 6 cut(s) 231, 483, 1271, 1478, 1741, 2133
AlwI GGATC 8 cut(s) 551, 627, 1231, 1245, 1568, 1827, 1840, 2322
AlwNI CAGNNNCTG 1 cut(s) 143
Ama87I CYCGRG 1 cut(s) 180
Aor13HI TCCGGA 2 cut(s) 307, 2480
AoxI GGCC 8 cut(s) 99, 446, 716, 1183, 1713, 1911, 2510, 2850
ApeKI GCWGC 2 cut(s) 134, 1786
ApoI RAATTY 8 cut(s) 4, 80, 332, 373, 1451, 1495, 1541, 2657
ArsI GACNNNNNNTTYG 2 cut(s) 1811, 1843
AseI ATTAAT 1 cut(s) 723
Asp700I GAANNNNTTC 1 cut(s) 1495
AspA2I CCTAGG 1 cut(s) 29
AspLEI GCGC 1 cut(s) 2386
AspS9I GGNCC 6 cut(s) 766, 1189, 1713, 2201, 2511, 2758
AsuC2I CCSGG 1 cut(s) 76
AsuII TTCGAA 1 cut(s) 377
AsuNHI GCTAGC 1 cut(s) 1804
AvaI CYCGRG 1 cut(s) 180
AvaII GGWCC 4 cut(s) 766, 1189, 2201, 2758
AvrII CCTAGG 1 cut(s) 29
BalI TGGCCA 4 cut(s) 448, 1185, 1913, 2852
BamHI GGATCC 1 cut(s) 1832
BanII GRGCYC 1 cut(s) 264
BarI GAAGNNNNNNTAC 2 cut(s) 494, 526
BauI CACGAG 1 cut(s) 1371
BbsI GAAGAC 3 cut(s) 1007, 1581, 2201
Bbv12I GWGCWC 2 cut(s) 264, 1027
BbvCI CCTCAGC 1 cut(s) 12
BbvI GCAGC 2 cut(s) 121, 1798
BceAI ACGGC 1 cut(s) 2340
BcgI CGANNNNNNTGC 2 cut(s) 329, 363
BciT130I CCWGG 7 cut(s) 450, 1187, 1279, 1341, 2253, 2338, 2616
BclI TGATCA 2 cut(s) 94, 244
BcnI CCSGG 1 cut(s) 76
BcoDI GTCTC 6 cut(s) 231, 483, 1271, 1478, 1741, 2133
BcuI ACTAGT 1 cut(s) 611
BfmI CTRYAG 6 cut(s) 135, 744, 1548, 1784, 2175, 2810
BfrI CTTAAG 3 cut(s) 2282, 2395, 2792
BglI GCCNNNNNGGC 1 cut(s) 2361
BglII AGATCT 2 cut(s) 980, 1502
BisI GCNGC 2 cut(s) 135, 1787
BlnI CCTAGG 1 cut(s) 29
BlpI GCTNAGC 1 cut(s) 564
BlsI GCNGC 2 cut(s) 136, 1788
Bme1390I CCNGG 8 cut(s) 76, 450, 1187, 1279, 1341, 2253, 2338, 2616
Bme18I GGWCC 4 cut(s) 766, 1189, 2201, 2758
BmeRI GACNNNNNGTC 1 cut(s) 1263
BmeT110I CYCGRG 1 cut(s) 180
BmgBI CACGTC 2 cut(s) 751, 2764
BmgT120I GGNCC 6 cut(s) 766, 1189, 1713, 2201, 2511, 2758
BmiI GGNNCC 4 cut(s) 73, 204, 1834, 2202
BmrFI CCNGG 8 cut(s) 76, 450, 1187, 1279, 1341, 2253, 2338, 2616
BmrI ACTGGG 1 cut(s) 1305
BmsI GCATC 5 cut(s) 1224, 2086, 2371, 2486, 2833
BmtI GCTAGC 1 cut(s) 1808
BmuI ACTGGG 1 cut(s) 1305
BoxI GACNNNNGTC 1 cut(s) 2145
BpiI GAAGAC 3 cut(s) 1007, 1581, 2201
BplI GAGNNNNNCTC 2 cut(s) 1243, 1275
BpmI CTGGAG 4 cut(s) 1232, 1605, 1659, 1722
Bpu10I CCTNAGC 1 cut(s) 12
Bpu1102I GCTNAGC 1 cut(s) 564
Bpu14I TTCGAA 1 cut(s) 377
BpuEI CTTGAG 6 cut(s) 714, 849, 1063, 1380, 1505, 2579
BpuMI CCSGG 1 cut(s) 76
BsaBI GATNNNNATC 1 cut(s) 2404
BsaI GGTCTC 1 cut(s) 2133
BsaJI CCNNGG 3 cut(s) 29, 440, 1277
BsaWI WCCGGW 2 cut(s) 307, 2480
BsaXI ACNNNNNCTCC 2 cut(s) 399, 429
Bsc4I CCNNNNNNNGG 2 cut(s) 1046, 1829
Bse118I RCCGGY 1 cut(s) 2569
Bse1I ACTGG 5 cut(s) 148, 1300, 1492, 2073, 2132
Bse3DI GCAATG 4 cut(s) 73, 1579, 2217, 2437
Bse8I GATNNNNATC 1 cut(s) 2404
BseAI TCCGGA 2 cut(s) 307, 2480
BseBI CCWGG 7 cut(s) 450, 1187, 1279, 1341, 2253, 2338, 2616
BseDI CCNNGG 3 cut(s) 29, 440, 1277
BseGI GGATG 4 cut(s) 436, 554, 2477, 2586
BseJI GATNNNNATC 1 cut(s) 2404
BseLI CCNNNNNNNGG 2 cut(s) 1046, 1829
BseMI GCAATG 4 cut(s) 73, 1579, 2217, 2437
BseMII CTCAG 5 cut(s) 555, 1217, 1599, 1851, 2742
BseNI ACTGG 5 cut(s) 148, 1300, 1492, 2073, 2132
BseRI GAGGAG 1 cut(s) 956
BseXI GCAGC 2 cut(s) 121, 1798
BseYI CCCAGC 1 cut(s) 1985
BsgI GTGCAG 2 cut(s) 1083, 1981
BshFI GGCC 8 cut(s) 101, 448, 718, 1185, 1715, 1913, 2512, 2852
BsiHKAI GWGCWC 2 cut(s) 264, 1027
BsiHKCI CYCGRG 1 cut(s) 180
BsiSI CCGG 4 cut(s) 75, 308, 2481, 2570
BslFI GGGAC 3 cut(s) 1022, 2009, 2864
BslI CCNNNNNNNGG 2 cut(s) 1046, 1829
BsmAI GTCTC 6 cut(s) 231, 483, 1271, 1478, 1741, 2133
BsmBI CGTCTC 2 cut(s) 483, 1741
BsmFI GGGAC 3 cut(s) 1022, 2009, 2864
BsmI GAATGC 1 cut(s) 920
BsnI GGCC 8 cut(s) 101, 448, 718, 1185, 1715, 1913, 2512, 2852
Bso31I GGTCTC 1 cut(s) 2133
BsoBI CYCGRG 1 cut(s) 180
Bsp119I TTCGAA 1 cut(s) 377
Bsp1286I GDGCHC 2 cut(s) 264, 1027
Bsp13I TCCGGA 2 cut(s) 307, 2480
Bsp1720I GCTNAGC 1 cut(s) 564
Bsp19I CCATGG 1 cut(s) 440
BspACI CCGC 5 cut(s) 847, 911, 1926, 1996, 2567
BspANI GGCC 8 cut(s) 101, 448, 718, 1185, 1715, 1913, 2512, 2852
BspCNI CTCAG 6 cut(s) 4, 556, 1216, 1600, 1850, 2741
BspEI TCCGGA 2 cut(s) 307, 2480
BspHI TCATGA 2 cut(s) 2238, 2488
BspLI GGNNCC 4 cut(s) 73, 204, 1834, 2202
BspMAI CTGCAG 4 cut(s) 139, 1552, 1788, 2814
BspOI GCTAGC 1 cut(s) 1808
BspPI GGATC 8 cut(s) 551, 627, 1231, 1245, 1568, 1827, 1840, 2322
BspT104I TTCGAA 1 cut(s) 377
BspTI CTTAAG 3 cut(s) 2282, 2395, 2792
BspTNI GGTCTC 1 cut(s) 2133
BsrDI GCAATG 4 cut(s) 73, 1579, 2217, 2437
BsrFI RCCGGY 1 cut(s) 2569
BsrI ACTGG 5 cut(s) 148, 1300, 1492, 2073, 2132
BssAI RCCGGY 1 cut(s) 2569
BssECI CCNNGG 3 cut(s) 29, 440, 1277
BssNAI GTATAC 1 cut(s) 988
BssSI CACGAG 1 cut(s) 1371
BssT1I CCWWGG 2 cut(s) 29, 440
Bst1107I GTATAC 1 cut(s) 988
Bst2BI CACGAG 1 cut(s) 1371
Bst2UI CCWGG 7 cut(s) 450, 1187, 1279, 1341, 2253, 2338, 2616
Bst6I CTCTTC 4 cut(s) 787, 1144, 1327, 2722
BstAFI CTTAAG 3 cut(s) 2282, 2395, 2792
BstBI TTCGAA 1 cut(s) 377
BstC8I GCNNGC 2 cut(s) 1806, 2562
BstDEI CTNAG 8 cut(s) 12, 564, 786, 1203, 1608, 1837, 2034, 2728
BstDSI CCRYGG 1 cut(s) 440
BstEII GGTNACC 1 cut(s) 2633
BstF5I GGATG 4 cut(s) 436, 554, 2477, 2586
BstHHI GCGC 1 cut(s) 2386
BstMAI GTCTC 6 cut(s) 231, 483, 1271, 1478, 1741, 2133
BstNI CCWGG 7 cut(s) 450, 1187, 1279, 1341, 2253, 2338, 2616
BstNSI RCATGY 1 cut(s) 1895
BstPAI GACNNNNGTC 1 cut(s) 2145
BstPI GGTNACC 1 cut(s) 2633
BstSCI CCNGG 8 cut(s) 74, 448, 1185, 1277, 1339, 2251, 2336, 2614
BstSFI CTRYAG 6 cut(s) 135, 744, 1548, 1784, 2175, 2810
BstV1I GCAGC 2 cut(s) 121, 1798
BstV2I GAAGAC 3 cut(s) 1007, 1581, 2201
BstX2I RGATCY 4 cut(s) 980, 1223, 1502, 1832
BstYI RGATCY 4 cut(s) 980, 1223, 1502, 1832
BstZ17I GTATAC 1 cut(s) 988
BsuRI GGCC 8 cut(s) 101, 448, 718, 1185, 1715, 1913, 2512, 2852
BtgI CCRYGG 1 cut(s) 440
BtrI CACGTC 2 cut(s) 751, 2764
BtsCI GGATG 4 cut(s) 436, 554, 2477, 2586
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 5 cut(s) 141, 199, 939, 1066, 2066
Cac8I GCNNGC 2 cut(s) 1806, 2562
CaiI CAGNNNCTG 1 cut(s) 143
CciI TCATGA 2 cut(s) 2238, 2488
CfoI GCGC 1 cut(s) 2386
Cfr10I RCCGGY 1 cut(s) 2569
Cfr13I GGNCC 6 cut(s) 766, 1189, 1713, 2201, 2511, 2758
CseI GACGC 3 cut(s) 465, 1758, 2307
Csp6I GTAC 1 cut(s) 2648
CspCI CAANNNNNGTGG 2 cut(s) 618, 653
CviQI GTAC 1 cut(s) 2648
DdeI CTNAG 8 cut(s) 12, 564, 786, 1203, 1608, 1837, 2034, 2728
DraI TTTAAA 1 cut(s) 2127
DriI GACNNNNNGTC 1 cut(s) 1263
EaeI YGGCCR 4 cut(s) 446, 1183, 1911, 2850
Eam1104I CTCTTC 4 cut(s) 787, 1144, 1327, 2722
Eam1105I GACNNNNNGTC 1 cut(s) 1263
EarI CTCTTC 4 cut(s) 787, 1144, 1327, 2722
Ecl136II GAGCTC 1 cut(s) 262
Eco130I CCWWGG 2 cut(s) 29, 440
Eco147I AGGCCT 1 cut(s) 718
Eco24I GRGCYC 1 cut(s) 264
Eco31I GGTCTC 1 cut(s) 2133
Eco47I GGWCC 4 cut(s) 766, 1189, 2201, 2758
Eco53kI GAGCTC 1 cut(s) 262
Eco57I CTGAAG 2 cut(s) 1212, 2516
Eco88I CYCGRG 1 cut(s) 180
Eco91I GGTNACC 1 cut(s) 2633
EcoICRI GAGCTC 1 cut(s) 262
EcoO65I GGTNACC 1 cut(s) 2633
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 7 cut(s) 448, 1185, 1277, 1339, 2251, 2336, 2614
EcoT14I CCWWGG 2 cut(s) 29, 440
EcoT38I GRGCYC 1 cut(s) 264
ErhI CCWWGG 2 cut(s) 29, 440
Esp3I CGTCTC 2 cut(s) 483, 1741
FalI AAGNNNNNCTT 2 cut(s) 96, 128
FaqI GGGAC 3 cut(s) 1022, 2009, 2864
FauNDI CATATG 1 cut(s) 958
FbaI TGATCA 2 cut(s) 94, 244
FblI GTMKAC 3 cut(s) 747, 987, 1243
Fnu4HI GCNGC 2 cut(s) 135, 1787
FokI GGATG 4 cut(s) 423, 561, 2464, 2573
FriOI GRGCYC 1 cut(s) 264
Fsp4HI GCNGC 2 cut(s) 135, 1787
FspI TGCGCA 1 cut(s) 2385
GlaI GCGC 1 cut(s) 2385
GluI GCNGC 2 cut(s) 135, 1787
GsaI CCCAGC 1 cut(s) 1989
GsuI CTGGAG 4 cut(s) 1232, 1605, 1659, 1722
HaeIII GGCC 8 cut(s) 101, 448, 718, 1185, 1715, 1913, 2512, 2852
HapII CCGG 4 cut(s) 75, 308, 2481, 2570
HgaI GACGC 3 cut(s) 465, 1758, 2307
HhaI GCGC 1 cut(s) 2386
Hin6I GCGC 1 cut(s) 2384
HinP1I GCGC 1 cut(s) 2384
HincII GTYRAC 2 cut(s) 2015, 2829
HindII GTYRAC 2 cut(s) 2015, 2829
HindIII AAGCTT 7 cut(s) 105, 468, 966, 1523, 1707, 1906, 2466
HpaI GTTAAC 1 cut(s) 2829
HpaII CCGG 4 cut(s) 75, 308, 2481, 2570
Hpy166II GTNNAC 9 cut(s) 748, 988, 1244, 1897, 2015, 2575, 2758, 2800, 2829
Hpy8I GTNNAC 9 cut(s) 748, 988, 1244, 1897, 2015, 2575, 2758, 2800, 2829
Hpy99I CGWCG 2 cut(s) 495, 2768
HpyAV CCTTC 7 cut(s) 373, 586, 660, 1040, 1248, 1932, 2277
HpyCH4IV ACGT 5 cut(s) 513, 750, 2763, 2856, 2877
HpyF3I CTNAG 8 cut(s) 12, 564, 786, 1203, 1608, 1837, 2034, 2728
HpySE526I ACGT 5 cut(s) 513, 750, 2763, 2856, 2877
HspAI GCGC 1 cut(s) 2384
Kpn2I TCCGGA 2 cut(s) 307, 2480
Ksp22I TGATCA 2 cut(s) 94, 244
KspAI GTTAAC 1 cut(s) 2829
LmnI GCTCC 4 cut(s) 77, 118, 1757, 2821
Lsp1109I GCAGC 2 cut(s) 121, 1798
LweI GCATC 5 cut(s) 1224, 2086, 2371, 2486, 2833
MaeII ACGT 5 cut(s) 513, 750, 2763, 2856, 2877
MflI RGATCY 4 cut(s) 980, 1223, 1502, 1832
MhlI GDGCHC 2 cut(s) 264, 1027
MlsI TGGCCA 4 cut(s) 448, 1185, 1913, 2852
MluNI TGGCCA 4 cut(s) 448, 1185, 1913, 2852
MlyI GAGTC 6 cut(s) 233, 1044, 1252, 1409, 2693, 2720
MmeI TCCRAC 2 cut(s) 677, 2292
Mox20I TGGCCA 4 cut(s) 448, 1185, 1913, 2852
MroI TCCGGA 2 cut(s) 307, 2480
MroXI GAANNNNTTC 1 cut(s) 1495
MscI TGGCCA 4 cut(s) 448, 1185, 1913, 2852
MslI CAYNNNNRTG 1 cut(s) 439
Msp20I TGGCCA 4 cut(s) 448, 1185, 1913, 2852
MspA1I CMGCKG 1 cut(s) 1789
MspCI CTTAAG 3 cut(s) 2282, 2395, 2792
MspI CCGG 4 cut(s) 75, 308, 2481, 2570
MspR9I CCNGG 8 cut(s) 76, 450, 1187, 1279, 1341, 2253, 2338, 2616
Mva1269I GAATGC 1 cut(s) 920
MvaI CCWGG 7 cut(s) 450, 1187, 1279, 1341, 2253, 2338, 2616
NciI CCSGG 1 cut(s) 76
NcoI CCATGG 1 cut(s) 440
NdeI CATATG 1 cut(s) 958
NheI GCTAGC 1 cut(s) 1804
NlaIV GGNNCC 4 cut(s) 73, 204, 1834, 2202
NmuCI GTSAC 8 cut(s) 432, 1667, 1725, 2440, 2456, 2685, 2784, 2857
NsbI TGCGCA 1 cut(s) 2385
NspI RCATGY 1 cut(s) 1895
NspV TTCGAA 1 cut(s) 377
PaeR7I CTCGAG 1 cut(s) 180
PagI TCATGA 2 cut(s) 2238, 2488
PceI AGGCCT 1 cut(s) 718
PciI ACATGT 1 cut(s) 1891
PctI GAATGC 1 cut(s) 920
PdmI GAANNNNTTC 1 cut(s) 1495
PflFI GACNNNGTC 1 cut(s) 2762
PfoI TCCNGGA 3 cut(s) 74, 1339, 2336
PkrI GCNGC 2 cut(s) 136, 1788
PleI GAGTC 6 cut(s) 233, 1043, 1252, 1408, 2692, 2720
PpsI GAGTC 6 cut(s) 233, 1043, 1252, 1408, 2692, 2720
PscI ACATGT 1 cut(s) 1891
PshAI GACNNNNGTC 1 cut(s) 2145
PshBI ATTAAT 1 cut(s) 723
PsiI TTATAA 1 cut(s) 1862
Psp124BI GAGCTC 1 cut(s) 264
Psp6I CCWGG 7 cut(s) 448, 1185, 1277, 1339, 2251, 2336, 2614
PspEI GGTNACC 1 cut(s) 2633
PspFI CCCAGC 1 cut(s) 1985
PspGI CCWGG 7 cut(s) 448, 1185, 1277, 1339, 2251, 2336, 2614
PspN4I GGNNCC 4 cut(s) 73, 204, 1834, 2202
PspPI GGNCC 6 cut(s) 766, 1189, 1713, 2201, 2511, 2758
PstI CTGCAG 4 cut(s) 139, 1552, 1788, 2814
PstNI CAGNNNCTG 1 cut(s) 143
PsuI RGATCY 4 cut(s) 980, 1223, 1502, 1832
PsyI GACNNNGTC 1 cut(s) 2762
PvuII CAGCTG 1 cut(s) 1789
RsaI GTAC 1 cut(s) 2649
RsaNI GTAC 1 cut(s) 2648
RseI CAYNNNNRTG 1 cut(s) 439
SacI GAGCTC 1 cut(s) 264
SatI GCNGC 2 cut(s) 135, 1787
Sau96I GGNCC 6 cut(s) 766, 1189, 1713, 2201, 2511, 2758
SchI GAGTC 6 cut(s) 233, 1044, 1252, 1409, 2693, 2720
ScrFI CCNGG 8 cut(s) 76, 450, 1187, 1279, 1341, 2253, 2338, 2616
SduI GDGCHC 2 cut(s) 264, 1027
SfaNI GCATC 5 cut(s) 1224, 2086, 2371, 2486, 2833
SfcI CTRYAG 6 cut(s) 135, 744, 1548, 1784, 2175, 2810
Sfr274I CTCGAG 1 cut(s) 180
SfuI TTCGAA 1 cut(s) 377
SinI GGWCC 4 cut(s) 766, 1189, 2201, 2758
SlaI CTCGAG 1 cut(s) 180
SmiMI CAYNNNNRTG 1 cut(s) 439
SpeI ACTAGT 1 cut(s) 611
SseBI AGGCCT 1 cut(s) 718
SsiI CCGC 5 cut(s) 847, 911, 1926, 1996, 2567
SspI AATATT 2 cut(s) 459, 1336
SstI GAGCTC 1 cut(s) 264
StuI AGGCCT 1 cut(s) 718
StyD4I CCNGG 8 cut(s) 74, 448, 1185, 1277, 1339, 2251, 2336, 2614
StyI CCWWGG 2 cut(s) 29, 440
TaiI ACGT 5 cut(s) 516, 753, 2766, 2859, 2880
TscAI CASTG 5 cut(s) 148, 199, 939, 1066, 2073
TseFI GTSAC 8 cut(s) 432, 1667, 1725, 2440, 2456, 2685, 2784, 2857
TseI GCWGC 2 cut(s) 134, 1786
Tsp45I GTSAC 8 cut(s) 432, 1667, 1725, 2440, 2456, 2685, 2784, 2857
TspGWI ACGGA 4 cut(s) 215, 914, 1236, 2444
TspRI CASTG 5 cut(s) 148, 199, 939, 1066, 2073
Tth111I GACNNNGTC 1 cut(s) 2762
Vha464I CTTAAG 3 cut(s) 2282, 2395, 2792
VpaK11BI GGWCC 4 cut(s) 766, 1189, 2201, 2758
VspI ATTAAT 1 cut(s) 723
XapI RAATTY 8 cut(s) 4, 80, 332, 373, 1451, 1495, 1541, 2657
XbaI TCTAGA 2 cut(s) 368, 1499
XceI RCATGY 1 cut(s) 1895
XhoI CTCGAG 1 cut(s) 180
XmaJI CCTAGG 1 cut(s) 29
XmiI GTMKAC 3 cut(s) 747, 987, 1243
XmnI GAANNNNTTC 1 cut(s) 1495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.