PWWP domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05430 AT3G05430 AT5G27650 |
| fragaria_vesca | FvH4_6g06310 FvH4_6g06310 |
| malus_domestica | MD12G1216400.v1.1 |
| prunus_persica | Prupe.6G322700_v2.0.a1 |
| pyrus_communis | pycom04g17860 pycom12g20190 |
| rosa_chinensis | RchiOBHm_Chr3g0455351 |
| rosa_laevigata | RLG00000025367 |
| rosa_multiflora | Rmu_sc0002169.1_g000047 Rmu_sc0024960.1_g000002 Rmu_sc0034256.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00424340 |
| rosa_rugosa | Rorug03G0006700 |
| rosa_samantha | Rh3AG066300 Rh3BG068600 Rh3CG067000 Rh3DG068400 |
| rosa_wichuraiana | Rw3G005230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3279 |
| AarI | CACCTGC | 2 cut(s) | 705, 2713 |
| Acc36I | ACCTGC | 2 cut(s) | 705, 2713 |
| Acc65I | GGTACC | 1 cut(s) | 1420 |
| AccB1I | GGYRCC | 1 cut(s) | 1420 |
| AccII | CGCG | 2 cut(s) | 2596, 2959 |
| AccIII | TCCGGA | 1 cut(s) | 193 |
| AclWI | GGATC | 7 cut(s) | 843, 1285, 1955, 2116, 2180, 2409, 2754 |
| AcoI | YGGCCR | 2 cut(s) | 494, 1865 |
| AcsI | RAATTY | 6 cut(s) | 246, 670, 2352, 2675, 2723, 3134 |
| AcuI | CTGAAG | 6 cut(s) | 1131, 1939, 2627, 2735, 2925, 3077 |
| AcvI | CACGTG | 1 cut(s) | 3128 |
| AcyI | GRCGYC | 1 cut(s) | 3425 |
| AdeI | CACNNNGTG | 2 cut(s) | 1874, 3032 |
| AfaI | GTAC | 8 cut(s) | 785, 827, 1231, 1268, 1422, 2382, 2804, 3567 |
| AflIII | ACRYGT | 2 cut(s) | 288, 3127 |
| AhlI | ACTAGT | 2 cut(s) | 770, 2155 |
| AjiI | CACGTC | 2 cut(s) | 289, 528 |
| AjnI | CCWGG | 4 cut(s) | 488, 564, 2611, 3184 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1752, 1784, 1919, 1951, 2517, 2549 |
| AleI | CACNNNNGTG | 1 cut(s) | 773 |
| Alw21I | GWGCWC | 6 cut(s) | 123, 433, 1084, 2452, 3244, 3499 |
| Alw44I | GTGCAC | 2 cut(s) | 3240, 3495 |
| AlwI | GGATC | 7 cut(s) | 843, 1285, 1955, 2116, 2180, 2409, 2754 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3013 |
| Ama87I | CYCGRG | 3 cut(s) | 89, 1077, 2361 |
| Aor13HI | TCCGGA | 1 cut(s) | 193 |
| AoxI | GGCC | 8 cut(s) | 494, 516, 765, 1237, 1254, 1865, 2250, 3353 |
| ApaI | GGGCCC | 1 cut(s) | 2254 |
| ApaLI | GTGCAC | 2 cut(s) | 3240, 3495 |
| ApeKI | GCWGC | 8 cut(s) | 1569, 2477, 2519, 2822, 3007, 3010, 3013, 3409 |
| ApoI | RAATTY | 6 cut(s) | 246, 670, 2352, 2675, 2723, 3134 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2055 |
| Asp718I | GGTACC | 1 cut(s) | 1420 |
| AspLEI | GCGC | 1 cut(s) | 540 |
| AsuC2I | CCSGG | 4 cut(s) | 498, 608, 780, 2249 |
| AsuII | TTCGAA | 1 cut(s) | 447 |
| AvaI | CYCGRG | 3 cut(s) | 89, 1077, 2361 |
| AvaII | GGWCC | 7 cut(s) | 1094, 1159, 1553, 1593, 1649, 2738, 2900 |
| AxyI | CCTNAGG | 1 cut(s) | 66 |
| BaeGI | GKGCMC | 5 cut(s) | 2254, 2589, 3244, 3499, 3591 |
| BanI | GGYRCC | 1 cut(s) | 1420 |
| BanII | GRGCYC | 9 cut(s) | 123, 158, 433, 633, 1027, 1324, 1510, 2254, 2658 |
| BauI | CACGAG | 1 cut(s) | 3081 |
| BbrPI | CACGTG | 1 cut(s) | 3128 |
| BbsI | GAAGAC | 1 cut(s) | 1026 |
| Bbv12I | GWGCWC | 6 cut(s) | 123, 433, 1084, 2452, 3244, 3499 |
| BbvI | GCAGC | 8 cut(s) | 1556, 2489, 2506, 2834, 3000, 3019, 3022, 3421 |
| BceAI | ACGGC | 3 cut(s) | 88, 610, 1880 |
| BciT130I | CCWGG | 4 cut(s) | 490, 566, 2613, 3186 |
| BclI | TGATCA | 2 cut(s) | 319, 922 |
| BcnI | CCSGG | 4 cut(s) | 498, 608, 780, 2249 |
| BcuI | ACTAGT | 2 cut(s) | 770, 2155 |
| BfaI | CTAG | 6 cut(s) | 102, 771, 2156, 3159, 3222, 3285 |
| BfmI | CTRYAG | 6 cut(s) | 684, 1343, 1548, 2520, 2706, 3014 |
| BfuAI | ACCTGC | 2 cut(s) | 705, 2713 |
| BglII | AGATCT | 1 cut(s) | 170 |
| BlpI | GCTNAGC | 2 cut(s) | 612, 3527 |
| Bme1390I | CCNGG | 8 cut(s) | 490, 498, 566, 608, 780, 2249, 2613, 3186 |
| Bme18I | GGWCC | 7 cut(s) | 1094, 1159, 1553, 1593, 1649, 2738, 2900 |
| BmeT110I | CYCGRG | 3 cut(s) | 89, 1077, 2361 |
| BmgBI | CACGTC | 2 cut(s) | 289, 528 |
| BmrFI | CCNGG | 8 cut(s) | 490, 498, 566, 608, 780, 2249, 2613, 3186 |
| BmrI | ACTGGG | 1 cut(s) | 1880 |
| BmsI | GCATC | 7 cut(s) | 13, 1375, 1397, 2803, 2924, 3171, 3513 |
| BmuI | ACTGGG | 1 cut(s) | 1880 |
| BpiI | GAAGAC | 1 cut(s) | 1026 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 320, 352 |
| BpmI | CTGGAG | 2 cut(s) | 409, 2028 |
| Bpu10I | CCTNAGC | 3 cut(s) | 935, 1011, 2964 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 612, 3527 |
| Bpu14I | TTCGAA | 1 cut(s) | 447 |
| BpuMI | CCSGG | 4 cut(s) | 498, 608, 780, 2249 |
| BsaAI | YACGTR | 2 cut(s) | 1040, 3128 |
| BsaHI | GRCGYC | 1 cut(s) | 3425 |
| BsaI | GGTCTC | 6 cut(s) | 125, 995, 2342, 2546, 2762, 2945 |
| BsaWI | WCCGGW | 1 cut(s) | 193 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 541, 571, 3415, 3445, 3464, 3494 |
| Bse1I | ACTGG | 5 cut(s) | 911, 1465, 1875, 2369, 3100 |
| Bse21I | CCTNAGG | 1 cut(s) | 66 |
| Bse3DI | GCAATG | 9 cut(s) | 1216, 1607, 1753, 2120, 2869, 2935, 3109, 3320, 3553 |
| BseAI | TCCGGA | 1 cut(s) | 193 |
| BseBI | CCWGG | 4 cut(s) | 490, 566, 2613, 3186 |
| BseGI | GGATG | 9 cut(s) | 28, 100, 331, 484, 862, 1388, 1390, 2639, 3595 |
| BseMI | GCAATG | 9 cut(s) | 1216, 1607, 1753, 2120, 2869, 2935, 3109, 3320, 3553 |
| BseNI | ACTGG | 5 cut(s) | 911, 1465, 1875, 2369, 3100 |
| BseRI | GAGGAG | 5 cut(s) | 704, 1685, 2349, 2377, 3297 |
| BseSI | GKGCMC | 5 cut(s) | 2254, 2589, 3244, 3499, 3591 |
| BseXI | GCAGC | 8 cut(s) | 1556, 2489, 2506, 2834, 3000, 3019, 3022, 3421 |
| BseYI | CCCAGC | 3 cut(s) | 2435, 2556, 3516 |
| BsgI | GTGCAG | 1 cut(s) | 3108 |
| Bsh1236I | CGCG | 2 cut(s) | 2596, 2959 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1031 |
| BshFI | GGCC | 8 cut(s) | 496, 518, 767, 1239, 1256, 1867, 2252, 3355 |
| BshNI | GGYRCC | 1 cut(s) | 1420 |
| BsiEI | CGRYCG | 1 cut(s) | 1031 |
| BsiHKAI | GWGCWC | 6 cut(s) | 123, 433, 1084, 2452, 3244, 3499 |
| BsiHKCI | CYCGRG | 3 cut(s) | 89, 1077, 2361 |
| BsiSI | CCGG | 9 cut(s) | 194, 497, 541, 608, 779, 803, 1392, 2248, 2990 |
| BslFI | GGGAC | 1 cut(s) | 1606 |
| BsmBI | CGTCTC | 1 cut(s) | 534 |
| BsmFI | GGGAC | 1 cut(s) | 1606 |
| BsmI | GAATGC | 1 cut(s) | 2975 |
| BsnI | GGCC | 8 cut(s) | 496, 518, 767, 1239, 1256, 1867, 2252, 3355 |
| Bso31I | GGTCTC | 6 cut(s) | 125, 995, 2342, 2546, 2762, 2945 |
| BsoBI | CYCGRG | 3 cut(s) | 89, 1077, 2361 |
| Bsp119I | TTCGAA | 1 cut(s) | 447 |
| Bsp120I | GGGCCC | 1 cut(s) | 2250 |
| Bsp13I | TCCGGA | 1 cut(s) | 193 |
| Bsp1407I | TGTACA | 1 cut(s) | 2802 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 612, 3527 |
| BspANI | GGCC | 8 cut(s) | 496, 518, 767, 1239, 1256, 1867, 2252, 3355 |
| BspEI | TCCGGA | 1 cut(s) | 193 |
| BspFNI | CGCG | 2 cut(s) | 2596, 2959 |
| BspMAI | CTGCAG | 4 cut(s) | 1347, 2524, 2710, 3018 |
| BspMI | ACCTGC | 2 cut(s) | 705, 2713 |
| BspPI | GGATC | 7 cut(s) | 843, 1285, 1955, 2116, 2180, 2409, 2754 |
| BspQI | GCTCTTC | 1 cut(s) | 923 |
| BspT104I | TTCGAA | 1 cut(s) | 447 |
| BspT107I | GGYRCC | 1 cut(s) | 1420 |
| BspTNI | GGTCTC | 6 cut(s) | 125, 995, 2342, 2546, 2762, 2945 |
| BsrDI | GCAATG | 9 cut(s) | 1216, 1607, 1753, 2120, 2869, 2935, 3109, 3320, 3553 |
| BsrGI | TGTACA | 1 cut(s) | 2802 |
| BsrI | ACTGG | 5 cut(s) | 911, 1465, 1875, 2369, 3100 |
| BssNI | GRCGYC | 1 cut(s) | 3425 |
| BssSI | CACGAG | 1 cut(s) | 3081 |
| BssT1I | CCWWGG | 4 cut(s) | 916, 1447, 1998, 2643 |
| Bst2BI | CACGAG | 1 cut(s) | 3081 |
| Bst2UI | CCWGG | 4 cut(s) | 490, 566, 2613, 3186 |
| Bst4CI | ACNGT | 7 cut(s) | 1405, 1778, 1935, 2900, 3032, 3218, 3505 |
| Bst6I | CTCTTC | 6 cut(s) | 923, 984, 1124, 2046, 3322, 3345 |
| BstACI | GRCGYC | 1 cut(s) | 3425 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1569, 2726, 3013 |
| BstAUI | TGTACA | 1 cut(s) | 2802 |
| BstBAI | YACGTR | 2 cut(s) | 1040, 3128 |
| BstBI | TTCGAA | 1 cut(s) | 447 |
| BstC8I | GCNNGC | 6 cut(s) | 904, 1207, 1561, 2172, 2961, 3575 |
| BstDSI | CCRYGG | 1 cut(s) | 2957 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1514 |
| BstF5I | GGATG | 9 cut(s) | 28, 100, 331, 484, 862, 1388, 1390, 2639, 3595 |
| BstFNI | CGCG | 2 cut(s) | 2596, 2959 |
| BstHHI | GCGC | 1 cut(s) | 540 |
| BstMCI | CGRYCG | 1 cut(s) | 1031 |
| BstNI | CCWGG | 4 cut(s) | 490, 566, 2613, 3186 |
| BstNSI | RCATGY | 1 cut(s) | 2787 |
| BstSCI | CCNGG | 8 cut(s) | 488, 496, 564, 606, 778, 2247, 2611, 3184 |
| BstSFI | CTRYAG | 6 cut(s) | 684, 1343, 1548, 2520, 2706, 3014 |
| BstSLI | GKGCMC | 5 cut(s) | 2254, 2589, 3244, 3499, 3591 |
| BstUI | CGCG | 2 cut(s) | 2596, 2959 |
| BstV1I | GCAGC | 8 cut(s) | 1556, 2489, 2506, 2834, 3000, 3019, 3022, 3421 |
| BstV2I | GAAGAC | 1 cut(s) | 1026 |
| BstX2I | RGATCY | 4 cut(s) | 170, 1960, 2108, 2414 |
| BstYI | RGATCY | 4 cut(s) | 170, 1960, 2108, 2414 |
| Bsu36I | CCTNAGG | 1 cut(s) | 66 |
| BsuRI | GGCC | 8 cut(s) | 496, 518, 767, 1239, 1256, 1867, 2252, 3355 |
| BtgI | CCRYGG | 1 cut(s) | 2957 |
| BtgZI | GCGATG | 1 cut(s) | 273 |
| BtrI | CACGTC | 2 cut(s) | 289, 528 |
| BtsCI | GGATG | 9 cut(s) | 28, 100, 331, 484, 862, 1388, 1390, 2639, 3595 |
| BtsI | GCAGTG | 2 cut(s) | 828, 1059 |
| BtsIMutI | CAGTG | 8 cut(s) | 828, 1059, 1458, 1783, 1868, 2603, 3037, 3223 |
| BveI | ACCTGC | 2 cut(s) | 705, 2713 |
| Cac8I | GCNNGC | 6 cut(s) | 904, 1207, 1561, 2172, 2961, 3575 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3013 |
| CfoI | GCGC | 1 cut(s) | 540 |
| Cfr42I | CCGCGG | 1 cut(s) | 2960 |
| CseI | GACGC | 1 cut(s) | 3433 |
| Csp6I | GTAC | 8 cut(s) | 784, 826, 1230, 1267, 1421, 2381, 2803, 3566 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1483, 1518, 1716, 1751, 2647, 2682 |
| CviQI | GTAC | 8 cut(s) | 784, 826, 1230, 1267, 1421, 2381, 2803, 3566 |
| DraI | TTTAAA | 3 cut(s) | 244, 1353, 2508 |
| DraIII | CACNNNGTG | 2 cut(s) | 1874, 3032 |
| EaeI | YGGCCR | 2 cut(s) | 494, 1865 |
| Eam1104I | CTCTTC | 6 cut(s) | 923, 984, 1124, 2046, 3322, 3345 |
| EarI | CTCTTC | 6 cut(s) | 923, 984, 1124, 2046, 3322, 3345 |
| EciI | GGCGGA | 2 cut(s) | 1141, 2455 |
| Ecl136II | GAGCTC | 2 cut(s) | 121, 431 |
| Eco130I | CCWWGG | 4 cut(s) | 916, 1447, 1998, 2643 |
| Eco147I | AGGCCT | 1 cut(s) | 518 |
| Eco24I | GRGCYC | 9 cut(s) | 123, 158, 433, 633, 1027, 1324, 1510, 2254, 2658 |
| Eco31I | GGTCTC | 6 cut(s) | 125, 995, 2342, 2546, 2762, 2945 |
| Eco47I | GGWCC | 7 cut(s) | 1094, 1159, 1553, 1593, 1649, 2738, 2900 |
| Eco53kI | GAGCTC | 2 cut(s) | 121, 431 |
| Eco57I | CTGAAG | 6 cut(s) | 1131, 1939, 2627, 2735, 2925, 3077 |
| Eco72I | CACGTG | 1 cut(s) | 3128 |
| Eco81I | CCTNAGG | 1 cut(s) | 66 |
| Eco88I | CYCGRG | 3 cut(s) | 89, 1077, 2361 |
| EcoICRI | GAGCTC | 2 cut(s) | 121, 431 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1514 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1553, 2251 |
| EcoRII | CCWGG | 4 cut(s) | 488, 564, 2611, 3184 |
| EcoT14I | CCWWGG | 4 cut(s) | 916, 1447, 1998, 2643 |
| EcoT22I | ATGCAT | 1 cut(s) | 1390 |
| EcoT38I | GRGCYC | 9 cut(s) | 123, 158, 433, 633, 1027, 1324, 1510, 2254, 2658 |
| ErhI | CCWWGG | 4 cut(s) | 916, 1447, 1998, 2643 |
| Esp3I | CGTCTC | 1 cut(s) | 534 |
| FaqI | GGGAC | 1 cut(s) | 1606 |
| FauI | CCCGC | 4 cut(s) | 158, 1506, 2952, 2964 |
| FauNDI | CATATG | 1 cut(s) | 1696 |
| FbaI | TGATCA | 2 cut(s) | 319, 922 |
| FokI | GGATG | 9 cut(s) | 35, 107, 338, 471, 869, 1375, 1397, 2626, 3582 |
| FriOI | GRGCYC | 9 cut(s) | 123, 158, 433, 633, 1027, 1324, 1510, 2254, 2658 |
| FspBI | CTAG | 6 cut(s) | 102, 771, 2156, 3159, 3222, 3285 |
| GlaI | GCGC | 1 cut(s) | 539 |
| GsaI | CCCAGC | 3 cut(s) | 2439, 2560, 3520 |
| GsuI | CTGGAG | 2 cut(s) | 409, 2028 |
| HaeIII | GGCC | 8 cut(s) | 496, 518, 767, 1239, 1256, 1867, 2252, 3355 |
| HapII | CCGG | 9 cut(s) | 194, 497, 541, 608, 779, 803, 1392, 2248, 2990 |
| HgaI | GACGC | 1 cut(s) | 3433 |
| HhaI | GCGC | 1 cut(s) | 540 |
| Hin1I | GRCGYC | 1 cut(s) | 3425 |
| Hin6I | GCGC | 1 cut(s) | 538 |
| HinP1I | GCGC | 1 cut(s) | 538 |
| HincII | GTYRAC | 1 cut(s) | 3537 |
| HindII | GTYRAC | 1 cut(s) | 3537 |
| HindIII | AAGCTT | 3 cut(s) | 1481, 1951, 2269 |
| HpaII | CCGG | 9 cut(s) | 194, 497, 541, 608, 779, 803, 1392, 2248, 2990 |
| Hpy166II | GTNNAC | 7 cut(s) | 826, 1232, 1408, 2896, 3242, 3497, 3537 |
| Hpy8I | GTNNAC | 7 cut(s) | 826, 1232, 1408, 2896, 3242, 3497, 3537 |
| Hpy99I | CGWCG | 1 cut(s) | 50 |
| HpyCH4III | ACNGT | 7 cut(s) | 1405, 1778, 1935, 2900, 3032, 3218, 3505 |
| HpyCH4IV | ACGT | 7 cut(s) | 48, 288, 527, 1039, 2446, 3127, 3564 |
| HpySE526I | ACGT | 7 cut(s) | 48, 288, 527, 1039, 2446, 3127, 3564 |
| Hsp92I | GRCGYC | 1 cut(s) | 3425 |
| HspAI | GCGC | 1 cut(s) | 538 |
| Kpn2I | TCCGGA | 1 cut(s) | 193 |
| KpnI | GGTACC | 1 cut(s) | 1424 |
| Ksp22I | TGATCA | 2 cut(s) | 319, 922 |
| KspI | CCGCGG | 1 cut(s) | 2960 |
| LguI | GCTCTTC | 1 cut(s) | 923 |
| LmnI | GCTCC | 7 cut(s) | 118, 161, 818, 1327, 1505, 2047, 2455 |
| Lsp1109I | GCAGC | 8 cut(s) | 1556, 2489, 2506, 2834, 3000, 3019, 3022, 3421 |
| LweI | GCATC | 7 cut(s) | 13, 1375, 1397, 2803, 2924, 3171, 3513 |
| MaeI | CTAG | 6 cut(s) | 102, 771, 2156, 3159, 3222, 3285 |
| MaeII | ACGT | 7 cut(s) | 48, 288, 527, 1039, 2446, 3127, 3564 |
| MfeI | CAATTG | 3 cut(s) | 1797, 2220, 3173 |
| MflI | RGATCY | 4 cut(s) | 170, 1960, 2108, 2414 |
| MlyI | GAGTC | 2 cut(s) | 718, 1634 |
| MmeI | TCCRAC | 3 cut(s) | 12, 1762, 2095 |
| Mph1103I | ATGCAT | 1 cut(s) | 1390 |
| MroI | TCCGGA | 1 cut(s) | 193 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2055 |
| MslI | CAYNNNNRTG | 3 cut(s) | 773, 2199, 2666 |
| MspA1I | CMGCKG | 6 cut(s) | 41, 1817, 2582, 2959, 3004, 3013 |
| MspI | CCGG | 9 cut(s) | 194, 497, 541, 608, 779, 803, 1392, 2248, 2990 |
| MspR9I | CCNGG | 8 cut(s) | 490, 498, 566, 608, 780, 2249, 2613, 3186 |
| MunI | CAATTG | 3 cut(s) | 1797, 2220, 3173 |
| Mva1269I | GAATGC | 1 cut(s) | 2975 |
| MvaI | CCWGG | 4 cut(s) | 490, 566, 2613, 3186 |
| MvnI | CGCG | 2 cut(s) | 2596, 2959 |
| NciI | CCSGG | 4 cut(s) | 498, 608, 780, 2249 |
| NdeI | CATATG | 1 cut(s) | 1696 |
| NmeAIII | GCCGAG | 2 cut(s) | 631, 1232 |
| NmuCI | GTSAC | 5 cut(s) | 1772, 1874, 2601, 3458, 3556 |
| NsiI | ATGCAT | 1 cut(s) | 1390 |
| NspI | RCATGY | 1 cut(s) | 2787 |
| NspV | TTCGAA | 1 cut(s) | 447 |
| OliI | CACNNNNGTG | 1 cut(s) | 773 |
| PaeR7I | CTCGAG | 1 cut(s) | 1077 |
| PaqCI | CACCTGC | 2 cut(s) | 705, 2713 |
| PceI | AGGCCT | 1 cut(s) | 518 |
| PciSI | GCTCTTC | 1 cut(s) | 923 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 600 |
| PctI | GAATGC | 1 cut(s) | 2975 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2055 |
| PfeI | GAWTC | 8 cut(s) | 17, 35, 230, 748, 1787, 2128, 2969, 3052 |
| PleI | GAGTC | 2 cut(s) | 717, 1633 |
| PmaCI | CACGTG | 1 cut(s) | 3128 |
| PmlI | CACGTG | 1 cut(s) | 3128 |
| PpsI | GAGTC | 2 cut(s) | 717, 1633 |
| Ppu21I | YACGTR | 2 cut(s) | 1040, 3128 |
| PpuMI | RGGWCCY | 1 cut(s) | 1553 |
| PsiI | TTATAA | 1 cut(s) | 3279 |
| Psp124BI | GAGCTC | 2 cut(s) | 123, 433 |
| Psp5II | RGGWCCY | 1 cut(s) | 1553 |
| Psp6I | CCWGG | 4 cut(s) | 488, 564, 2611, 3184 |
| PspCI | CACGTG | 1 cut(s) | 3128 |
| PspFI | CCCAGC | 3 cut(s) | 2435, 2556, 3516 |
| PspGI | CCWGG | 4 cut(s) | 488, 564, 2611, 3184 |
| PspOMI | GGGCCC | 1 cut(s) | 2250 |
| PspPPI | RGGWCCY | 1 cut(s) | 1553 |
| PspXI | VCTCGAGB | 1 cut(s) | 1077 |
| PstI | CTGCAG | 4 cut(s) | 1347, 2524, 2710, 3018 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3013 |
| PsuI | RGATCY | 4 cut(s) | 170, 1960, 2108, 2414 |
| PvuII | CAGCTG | 3 cut(s) | 1817, 2582, 3013 |
| RsaI | GTAC | 8 cut(s) | 785, 827, 1231, 1268, 1422, 2382, 2804, 3567 |
| RsaNI | GTAC | 8 cut(s) | 784, 826, 1230, 1267, 1421, 2381, 2803, 3566 |
| RseI | CAYNNNNRTG | 3 cut(s) | 773, 2199, 2666 |
| SacI | GAGCTC | 2 cut(s) | 123, 433 |
| SacII | CCGCGG | 1 cut(s) | 2960 |
| SapI | GCTCTTC | 1 cut(s) | 923 |
| SchI | GAGTC | 2 cut(s) | 718, 1634 |
| ScrFI | CCNGG | 8 cut(s) | 490, 498, 566, 608, 780, 2249, 2613, 3186 |
| SfaNI | GCATC | 7 cut(s) | 13, 1375, 1397, 2803, 2924, 3171, 3513 |
| SfcI | CTRYAG | 6 cut(s) | 684, 1343, 1548, 2520, 2706, 3014 |
| Sfr274I | CTCGAG | 1 cut(s) | 1077 |
| Sfr303I | CCGCGG | 1 cut(s) | 2960 |
| SfuI | TTCGAA | 1 cut(s) | 447 |
| SgrBI | CCGCGG | 1 cut(s) | 2960 |
| SinI | GGWCC | 7 cut(s) | 1094, 1159, 1553, 1593, 1649, 2738, 2900 |
| SlaI | CTCGAG | 1 cut(s) | 1077 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 773, 2199, 2666 |
| SmlI | CTYRAG | 1 cut(s) | 1077 |
| SmoI | CTYRAG | 1 cut(s) | 1077 |
| SpeI | ACTAGT | 2 cut(s) | 770, 2155 |
| SseBI | AGGCCT | 1 cut(s) | 518 |
| SspI | AATATT | 1 cut(s) | 3466 |
| SspMI | CTAG | 6 cut(s) | 102, 771, 2156, 3159, 3222, 3285 |
| SstI | GAGCTC | 2 cut(s) | 123, 433 |
| StuI | AGGCCT | 1 cut(s) | 518 |
| StyD4I | CCNGG | 8 cut(s) | 488, 496, 564, 606, 778, 2247, 2611, 3184 |
| StyI | CCWWGG | 4 cut(s) | 916, 1447, 1998, 2643 |
| TaaI | ACNGT | 7 cut(s) | 1405, 1778, 1935, 2900, 3032, 3218, 3505 |
| TaiI | ACGT | 7 cut(s) | 51, 291, 530, 1042, 2449, 3130, 3567 |
| TaqII | GACCGA | 2 cut(s) | 149, 1017 |
| TatI | WGTACW | 3 cut(s) | 825, 1229, 2802 |
| TauI | GCSGC | 4 cut(s) | 78, 144, 258, 3007 |
| TfiI | GAWTC | 8 cut(s) | 17, 35, 230, 748, 1787, 2128, 2969, 3052 |
| TscAI | CASTG | 8 cut(s) | 828, 1059, 1465, 1783, 1875, 2610, 3037, 3223 |
| TseFI | GTSAC | 5 cut(s) | 1772, 1874, 2601, 3458, 3556 |
| TseI | GCWGC | 8 cut(s) | 1569, 2477, 2519, 2822, 3007, 3010, 3013, 3409 |
| Tsp45I | GTSAC | 5 cut(s) | 1772, 1874, 2601, 3458, 3556 |
| TspGWI | ACGGA | 6 cut(s) | 420, 562, 741, 848, 2750, 3431 |
| TspRI | CASTG | 8 cut(s) | 828, 1059, 1465, 1783, 1875, 2610, 3037, 3223 |
| VneI | GTGCAC | 2 cut(s) | 3240, 3495 |
| VpaK11BI | GGWCC | 7 cut(s) | 1094, 1159, 1553, 1593, 1649, 2738, 2900 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1514 |
| XapI | RAATTY | 6 cut(s) | 246, 670, 2352, 2675, 2723, 3134 |
| XceI | RCATGY | 1 cut(s) | 2787 |
| XhoI | CTCGAG | 1 cut(s) | 1077 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2055 |
| XspI | CTAG | 6 cut(s) | 102, 771, 2156, 3159, 3222, 3285 |
| Zsp2I | ATGCAT | 1 cut(s) | 1390 |