AT3G05820

Alkaline neutral invertase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
1732988 .. 1735765
2778 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G05820.2

Sequence Viewer

Length: 1530 bp
ATGAATGCCATCACTTTTCTTGGAAATTCAACGATGATACCTTCACAATGTATTCTCCGAGCGTTTACAAGAATCTCTCCATCTAAATACATCCGAGACACCTCGTTTCGATCCTATCCTTCTCGGTTCTCAAGCTGCATCAACCAATACAGGAATGCAGATTCAGATAGAATCATCAGACCGACAAATGCTGTGCCATTTTGTACCGACAGGCAGAGCTCTGTTACAGCTCAGGTTGTTTCTGAGGCAAGAAGTCACTCTGCTTCCACCACATGCGCAAATGACACGACCTTGGATCAGATTTACACCAAGAACGGCTTAAATGTGAAACCTTTAGTTGTCGAGAGGTTAAAAAGAGATGAGAAAGATGAAGAGGCGGTCAATGAAGATGAAGAAGGCGTAAAGAGAGATGGTTTCGAGGGTGTTAAGTGTAATGACGTCGAGGAAGAGGCATGGAGATTGCTGAGGGATTCAATAGTGACATACTGCGATTCTCCTGTAGGAACGGTGGCTGCTAAAGATCCAACTGATACAACGCCATCAAACTACGATCAGGTCTTTATTAGGGATTTTGTACCTTCGGCTTTGGCTTTTCTCCTGAAGGGAGAAAGCGAAATTGTTCGAAACTTCCTTCTCCACACGTTGCAGTTGCAGAGTTGGGAGAAAACAGTTGATTGTTATAGTCCAGGACAAGGGTTAATGCCTGCGAGTTTCAAAGTCAGAACTTTACCGCTTGAAGAGGACAAGTTCGAAGAGGTTCTGGATCCAGATTTTGGCGAAGCAGCTATAGGTCGTGTTGCTCCCGTTGATTCTGGTTTATGGTGGATAATCTTGTTGAGGGCATACGGGAAAATCACAGGAGATTACTCGCTTCAAGAGAGGATAGATGTGCAGACAGGGATAAAGATGATTGCAAACCTGTGTTTAGCAGATGGGTTTGATATGTTTCCCACACTGTTGGTCACTGATGGCTCTTGTATGATAGATCGACGTATGGGTATCCACGGTCACCCTCTTGAGATCCAAGCTTTGTTCTATTCCGCTCTACGGTCTTCTCGTGAGATGATAACTGTAAATGATAGCTCCAAAAATATAATAAAGACAATTAGCAACAGGCTCAGCGCATTATCATTTCACATCAGAGAAAACTATTGGGTTGACAAAAACAAAATCAATGAAATTTACCGTTACAAGACAGAGGAGTACTCTATGGACGCCACCAACAAGTTCAATATCTACCCGGAACAGGTTTCTCCATGGCTAATGGATTGGGTTCCTGAAAGTCCTGACTCTGGATTCCTGATAGGAAACCTCCAGCCTGCTCACATGGATTTCAGGTTCTTCACCTTGGGAAACCTCTGGTCAATCATCTCCTCACTAGGAACACCAAAACAGAACCAAGCTATATTAAATTTGGTTGAAGAGAAATGGGACGATCTCGTTGGGCATATGCCGCTTAAGATATGTTACCCGGCTTTAGAATCTTCAGAGTGGCATATAATAACCGGGAGTGACCCAAAGAACACGTGA

Protein Analysis

509

Amino Acids

57.69

Weight (kDa)

5.06

Isoelectric Point (pI)

51.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_100 PF12899 151 - 592 3.2e-218 Alkaline and neutral invertase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011833)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 441
Acc16I TGCGCA 1 cut(s) 277
AccB7I CCANNNNNTGG 1 cut(s) 773
AccBSI CCGCTC 1 cut(s) 1043
AciI CCGC 4 cut(s) 377, 731, 1041, 1454
AclWI GGATC 6 cut(s) 105, 303, 515, 758, 771, 1015
AcsI RAATTY 3 cut(s) 25, 1179, 1411
AcuI CTGAAG 2 cut(s) 620, 1470
AcvI CACGTG 1 cut(s) 1527
AcyI GRCGYC 2 cut(s) 438, 1215
AfaI GTAC 3 cut(s) 205, 576, 1205
AfiI CCNNNNNNNGG 5 cut(s) 692, 773, 1047, 1246, 1292
AflII CTTAAG 1 cut(s) 1457
AflIII ACRYGT 2 cut(s) 639, 1524
AgsI TTSAA 7 cut(s) 30, 474, 715, 737, 875, 1231, 1421
AjnI CCWGG 1 cut(s) 685
AloI GAACNNNNNNTCC 2 cut(s) 1322, 1354
AluBI AGCT 7 cut(s) 135, 219, 230, 785, 1028, 1083, 1403
AluI AGCT 7 cut(s) 135, 219, 230, 785, 1028, 1083, 1403
Alw21I GWGCWC 1 cut(s) 221
Alw26I GTCTC 1 cut(s) 90
AlwI GGATC 6 cut(s) 105, 303, 515, 758, 771, 1015
ApeKI GCWGC 3 cut(s) 135, 512, 782
ApoI RAATTY 3 cut(s) 25, 1179, 1411
Asp700I GAANNNNTTC 2 cut(s) 618, 756
AspLEI GCGC 2 cut(s) 278, 1124
AsuC2I CCSGG 3 cut(s) 1241, 1472, 1507
AsuHPI GGTGA 2 cut(s) 1001, 1336
AsuII TTCGAA 2 cut(s) 622, 750
BamHI GGATCC 1 cut(s) 763
BanII GRGCYC 1 cut(s) 221
BauI CACGAG 1 cut(s) 1056
BbrPI CACGTG 1 cut(s) 1527
BbsI GAAGAC 1 cut(s) 1044
Bbv12I GWGCWC 1 cut(s) 221
BbvCI CCTCAGC 1 cut(s) 464
BbvI GCAGC 3 cut(s) 122, 499, 794
BccI CCATC 6 cut(s) 17, 88, 404, 547, 926, 962
BceAI ACGGC 1 cut(s) 331
BciT130I CCWGG 1 cut(s) 687
BciVI GTATCC 1 cut(s) 1010
BcnI CCSGG 3 cut(s) 1241, 1472, 1507
BcoDI GTCTC 1 cut(s) 90
BfaI CTAG 1 cut(s) 1379
BfmI CTRYAG 2 cut(s) 498, 786
BfrI CTTAAG 1 cut(s) 1457
BfuI GTATCC 1 cut(s) 1010
BisI GCNGC 4 cut(s) 136, 513, 783, 1454
BlpI GCTNAGC 1 cut(s) 1118
BlsI GCNGC 4 cut(s) 137, 514, 784, 1455
BmcAI AGTACT 1 cut(s) 1205
Bme1390I CCNGG 4 cut(s) 687, 1241, 1472, 1507
BmiI GGNNCC 2 cut(s) 765, 1275
BmrFI CCNGG 4 cut(s) 687, 1241, 1472, 1507
BmsI GCATC 1 cut(s) 147
BpiI GAAGAC 1 cut(s) 1044
BplI GAGNNNNNCTC 2 cut(s) 1190, 1222
BpmI CTGGAG 1 cut(s) 1298
Bpu10I CCTNAGC 2 cut(s) 231, 464
Bpu1102I GCTNAGC 1 cut(s) 1118
Bpu14I TTCGAA 2 cut(s) 622, 750
BpuEI CTTGAG 2 cut(s) 115, 1037
BpuMI CCSGG 3 cut(s) 1241, 1472, 1507
BsaAI YACGTR 1 cut(s) 1527
BsaHI GRCGYC 2 cut(s) 438, 1215
BsaJI CCNNGG 4 cut(s) 291, 1003, 1256, 1347
Bsc4I CCNNNNNNNGG 5 cut(s) 692, 773, 1047, 1246, 1292
BseBI CCWGG 1 cut(s) 687
BseDI CCNNGG 4 cut(s) 291, 1003, 1256, 1347
BseGI GGATG 1 cut(s) 90
BseLI CCNNNNNNNGG 5 cut(s) 692, 773, 1047, 1246, 1292
BseMII CTCAG 4 cut(s) 234, 245, 455, 1132
BseRI GAGGAG 2 cut(s) 1214, 1363
BseXI GCAGC 3 cut(s) 122, 499, 794
BsgI GTGCAG 1 cut(s) 911
BsiHKAI GWGCWC 1 cut(s) 221
BsiSI CCGG 3 cut(s) 1241, 1472, 1506
BslFI GGGAC 1 cut(s) 1445
BslI CCNNNNNNNGG 5 cut(s) 692, 773, 1047, 1246, 1292
BsmAI GTCTC 1 cut(s) 90
BsmFI GGGAC 1 cut(s) 1445
BsmI GAATGC 2 cut(s) 10, 160
Bsp119I TTCGAA 2 cut(s) 622, 750
Bsp1286I GDGCHC 1 cut(s) 221
Bsp143I GATC 8 cut(s) 110, 295, 520, 550, 763, 985, 1020, 1435
Bsp1720I GCTNAGC 1 cut(s) 1118
Bsp19I CCATGG 1 cut(s) 1256
BspACI CCGC 4 cut(s) 377, 731, 1041, 1454
BspCNI CTCAG 4 cut(s) 235, 244, 456, 1131
BspLI GGNNCC 2 cut(s) 765, 1275
BspPI GGATC 6 cut(s) 105, 303, 515, 758, 771, 1015
BspT104I TTCGAA 2 cut(s) 622, 750
BspTI CTTAAG 1 cut(s) 1457
BsrBI CCGCTC 1 cut(s) 1043
BssECI CCNNGG 4 cut(s) 291, 1003, 1256, 1347
BssMI GATC 8 cut(s) 110, 295, 520, 550, 763, 985, 1020, 1435
BssNI GRCGYC 2 cut(s) 438, 1215
BssSI CACGAG 1 cut(s) 1056
BssT1I CCWWGG 3 cut(s) 291, 1256, 1347
Bst2BI CACGAG 1 cut(s) 1056
Bst2UI CCWGG 1 cut(s) 687
Bst4CI ACNGT 7 cut(s) 508, 670, 957, 1007, 1050, 1072, 1187
Bst6I CTCTTC 5 cut(s) 366, 441, 732, 747, 1416
BstACI GRCGYC 2 cut(s) 438, 1215
BstAFI CTTAAG 1 cut(s) 1457
BstBAI YACGTR 1 cut(s) 1527
BstBI TTCGAA 2 cut(s) 622, 750
BstC8I GCNNGC 2 cut(s) 705, 1320
BstDEI CTNAG 4 cut(s) 231, 243, 464, 1118
BstDSI CCRYGG 2 cut(s) 1003, 1256
BstEII GGTNACC 1 cut(s) 1007
BstF5I GGATG 1 cut(s) 90
BstHHI GCGC 2 cut(s) 278, 1124
BstKTI GATC 8 cut(s) 113, 298, 523, 553, 766, 988, 1023, 1438
BstMAI GTCTC 1 cut(s) 90
BstMBI GATC 8 cut(s) 110, 295, 520, 550, 763, 985, 1020, 1435
BstMWI GCNNNNNNNGC 1 cut(s) 1453
BstNI CCWGG 1 cut(s) 687
BstNSI RCATGY 1 cut(s) 276
BstPI GGTNACC 1 cut(s) 1007
BstSCI CCNGG 4 cut(s) 685, 1239, 1470, 1505
BstSFI CTRYAG 2 cut(s) 498, 786
BstV1I GCAGC 3 cut(s) 122, 499, 794
BstV2I GAAGAC 1 cut(s) 1044
BstX2I RGATCY 3 cut(s) 520, 763, 1020
BstXI CCANNNNNNTGG 1 cut(s) 958
BstYI RGATCY 3 cut(s) 520, 763, 1020
BsuI GTATCC 1 cut(s) 1010
BtgI CCRYGG 2 cut(s) 1003, 1256
BtsCI GGATG 1 cut(s) 90
BtsIMutI CAGTG 2 cut(s) 953, 963
Cac8I GCNNGC 2 cut(s) 705, 1320
CfoI GCGC 2 cut(s) 278, 1124
CseI GACGC 1 cut(s) 1223
Csp6I GTAC 3 cut(s) 204, 575, 1204
CviAII CATG 4 cut(s) 273, 453, 1257, 1327
CviQI GTAC 3 cut(s) 204, 575, 1204
DdeI CTNAG 4 cut(s) 231, 243, 464, 1118
DpnI GATC 8 cut(s) 112, 297, 522, 552, 765, 987, 1022, 1437
DpnII GATC 8 cut(s) 110, 295, 520, 550, 763, 985, 1020, 1435
Eam1104I CTCTTC 5 cut(s) 366, 441, 732, 747, 1416
EarI CTCTTC 5 cut(s) 366, 441, 732, 747, 1416
Ecl136II GAGCTC 1 cut(s) 219
Eco130I CCWWGG 3 cut(s) 291, 1256, 1347
Eco24I GRGCYC 1 cut(s) 221
Eco53kI GAGCTC 1 cut(s) 219
Eco57I CTGAAG 2 cut(s) 620, 1470
Eco72I CACGTG 1 cut(s) 1527
Eco91I GGTNACC 1 cut(s) 1007
EcoICRI GAGCTC 1 cut(s) 219
EcoO65I GGTNACC 1 cut(s) 1007
EcoRII CCWGG 1 cut(s) 685
EcoT14I CCWWGG 3 cut(s) 291, 1256, 1347
EcoT38I GRGCYC 1 cut(s) 221
ErhI CCWWGG 3 cut(s) 291, 1256, 1347
FaeI CATG 4 cut(s) 276, 456, 1260, 1330
FalI AAGNNNNNCTT 2 cut(s) 302, 334
FaqI GGGAC 1 cut(s) 1445
FatI CATG 4 cut(s) 272, 452, 1256, 1326
FauNDI CATATG 1 cut(s) 1449
Fnu4HI GCNGC 4 cut(s) 136, 513, 783, 1454
FokI GGATG 1 cut(s) 77
FriOI GRGCYC 1 cut(s) 221
Fsp4HI GCNGC 4 cut(s) 136, 513, 783, 1454
FspBI CTAG 1 cut(s) 1379
FspI TGCGCA 1 cut(s) 277
GlaI GCGC 2 cut(s) 277, 1123
GluI GCNGC 4 cut(s) 136, 513, 783, 1454
GsuI CTGGAG 1 cut(s) 1298
HapII CCGG 3 cut(s) 1241, 1472, 1506
HgaI GACGC 1 cut(s) 1223
HhaI GCGC 2 cut(s) 278, 1124
Hin1I GRCGYC 2 cut(s) 438, 1215
Hin1II CATG 4 cut(s) 276, 456, 1260, 1330
Hin6I GCGC 2 cut(s) 276, 1122
HinP1I GCGC 2 cut(s) 276, 1122
HincII GTYRAC 1 cut(s) 1159
HindII GTYRAC 1 cut(s) 1159
HindIII AAGCTT 1 cut(s) 1026
HinfI GANTC 9 cut(s) 72, 161, 171, 470, 491, 809, 1289, 1296, 1481
HpaII CCGG 3 cut(s) 1241, 1472, 1506
HphI GGTGA 2 cut(s) 1001, 1336
Hpy166II GTNNAC 2 cut(s) 66, 1159
Hpy188I TCNGA 9 cut(s) 59, 95, 166, 179, 244, 300, 722, 1142, 1489
Hpy8I GTNNAC 2 cut(s) 66, 1159
Hpy99I CGWCG 2 cut(s) 443, 993
HpyAV CCTTC 6 cut(s) 51, 129, 389, 588, 595, 641
HpyCH4III ACNGT 7 cut(s) 508, 670, 957, 1007, 1050, 1072, 1187
HpyCH4IV ACGT 4 cut(s) 438, 641, 991, 1526
HpyCH4V TGCA 6 cut(s) 138, 158, 646, 652, 892, 914
HpyF10VI GCNNNNNNNGC 1 cut(s) 1453
HpyF3I CTNAG 4 cut(s) 231, 243, 464, 1118
HpySE526I ACGT 4 cut(s) 438, 641, 991, 1526
Hsp92I GRCGYC 2 cut(s) 438, 1215
Hsp92II CATG 4 cut(s) 276, 456, 1260, 1330
HspAI GCGC 2 cut(s) 276, 1122
Kzo9I GATC 8 cut(s) 110, 295, 520, 550, 763, 985, 1020, 1435
LmnI GCTCC 2 cut(s) 805, 1088
Lsp1109I GCAGC 3 cut(s) 122, 499, 794
LweI GCATC 1 cut(s) 147
MaeI CTAG 1 cut(s) 1379
MaeII ACGT 4 cut(s) 438, 641, 991, 1526
MaeIII GTNAC 8 cut(s) 223, 254, 478, 961, 1007, 1187, 1466, 1511
MalI GATC 8 cut(s) 112, 297, 522, 552, 765, 987, 1022, 1437
MbiI CCGCTC 1 cut(s) 1043
MboI GATC 8 cut(s) 110, 295, 520, 550, 763, 985, 1020, 1435
MflI RGATCY 3 cut(s) 520, 763, 1020
MhlI GDGCHC 1 cut(s) 221
MluCI AATT 5 cut(s) 25, 615, 1104, 1179, 1411
MlyI GAGTC 1 cut(s) 1283
MmeI TCCRAC 1 cut(s) 548
MroXI GAANNNNTTC 2 cut(s) 618, 756
MseI TTAA 6 cut(s) 320, 350, 426, 698, 1409, 1458
MspCI CTTAAG 1 cut(s) 1457
MspI CCGG 3 cut(s) 1241, 1472, 1506
MspR9I CCNGG 4 cut(s) 687, 1241, 1472, 1507
Mva1269I GAATGC 2 cut(s) 10, 160
MvaI CCWGG 1 cut(s) 687
MwoI GCNNNNNNNGC 1 cut(s) 1453
NciI CCSGG 3 cut(s) 1241, 1472, 1507
NcoI CCATGG 1 cut(s) 1256
NdeI CATATG 1 cut(s) 1449
NdeII GATC 8 cut(s) 110, 295, 520, 550, 763, 985, 1020, 1435
NlaIII CATG 4 cut(s) 276, 456, 1260, 1330
NlaIV GGNNCC 2 cut(s) 765, 1275
NmuCI GTSAC 5 cut(s) 254, 478, 961, 1007, 1511
NsbI TGCGCA 1 cut(s) 277
NspI RCATGY 1 cut(s) 276
NspV TTCGAA 2 cut(s) 622, 750
PcsI WCGNNNNNNNCGW 1 cut(s) 1054
PctI GAATGC 2 cut(s) 10, 160
PdmI GAANNNNTTC 2 cut(s) 618, 756
PfeI GAWTC 8 cut(s) 72, 161, 171, 470, 491, 809, 1296, 1481
PflMI CCANNNNNTGG 1 cut(s) 773
PfoI TCCNGGA 1 cut(s) 685
PkrI GCNGC 4 cut(s) 137, 514, 784, 1455
PleI GAGTC 1 cut(s) 1283
PmaCI CACGTG 1 cut(s) 1527
PmlI CACGTG 1 cut(s) 1527
PpsI GAGTC 1 cut(s) 1283
Ppu21I YACGTR 1 cut(s) 1527
Psp124BI GAGCTC 1 cut(s) 221
Psp6I CCWGG 1 cut(s) 685
PspCI CACGTG 1 cut(s) 1527
PspEI GGTNACC 1 cut(s) 1007
PspGI CCWGG 1 cut(s) 685
PspN4I GGNNCC 2 cut(s) 765, 1275
PsuI RGATCY 3 cut(s) 520, 763, 1020
RsaI GTAC 3 cut(s) 205, 576, 1205
RsaNI GTAC 3 cut(s) 204, 575, 1204
SacI GAGCTC 1 cut(s) 221
SaqAI TTAA 6 cut(s) 320, 350, 426, 698, 1409, 1458
SatI GCNGC 4 cut(s) 136, 513, 783, 1454
Sau3AI GATC 8 cut(s) 110, 295, 520, 550, 763, 985, 1020, 1435
ScaI AGTACT 1 cut(s) 1205
SchI GAGTC 1 cut(s) 1283
ScrFI CCNGG 4 cut(s) 687, 1241, 1472, 1507
SduI GDGCHC 1 cut(s) 221
SfaNI GCATC 1 cut(s) 147
SfcI CTRYAG 2 cut(s) 498, 786
SfuI TTCGAA 2 cut(s) 622, 750
SmlI CTYRAG 3 cut(s) 130, 1016, 1457
SmoI CTYRAG 3 cut(s) 130, 1016, 1457
Sse9I AATT 5 cut(s) 25, 615, 1104, 1179, 1411
SsiI CCGC 4 cut(s) 377, 731, 1041, 1454
SspMI CTAG 1 cut(s) 1379
SstI GAGCTC 1 cut(s) 221
StyD4I CCNGG 4 cut(s) 685, 1239, 1470, 1505
StyI CCWWGG 3 cut(s) 291, 1256, 1347
TaaI ACNGT 7 cut(s) 508, 670, 957, 1007, 1050, 1072, 1187
TaiI ACGT 4 cut(s) 441, 644, 994, 1529
TaqI TCGA 7 cut(s) 109, 342, 417, 441, 622, 750, 988
TaqII GACCGA 1 cut(s) 196
TasI AATT 5 cut(s) 25, 615, 1104, 1179, 1411
TatI WGTACW 1 cut(s) 1203
TauI GCSGC 1 cut(s) 1456
TfiI GAWTC 8 cut(s) 72, 161, 171, 470, 491, 809, 1296, 1481
Tru1I TTAA 6 cut(s) 320, 350, 426, 698, 1409, 1458
Tru9I TTAA 6 cut(s) 320, 350, 426, 698, 1409, 1458
TscAI CASTG 2 cut(s) 960, 970
TseFI GTSAC 5 cut(s) 254, 478, 961, 1007, 1511
TseI GCWGC 3 cut(s) 135, 512, 782
Tsp45I GTSAC 5 cut(s) 254, 478, 961, 1007, 1511
TspDTI ATGAA 5 cut(s) 17, 384, 399, 405, 1191
TspRI CASTG 2 cut(s) 960, 970
Van91I CCANNNNNTGG 1 cut(s) 773
Vha464I CTTAAG 1 cut(s) 1457
XapI RAATTY 3 cut(s) 25, 1179, 1411
XceI RCATGY 1 cut(s) 276
XmnI GAANNNNTTC 2 cut(s) 618, 756
XspI CTAG 1 cut(s) 1379
ZraI GACGTC 1 cut(s) 439
ZrmI AGTACT 1 cut(s) 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.