Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0011833

Physical Location & Seq

Genomic Coordinates Forward (+)

42817751 .. 42821896

Gene Structure 4146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00421710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGATTTCCTCCCTTAGTTTTCTTTGTCATTCTACAATGAAACCCACTTGTAGAATCCTGAGTAGTATTCGAAACTCTGCGTTTTTCGGGTTCGCGCCTGTTAAAATCCACAATGGGTCAGCAAAGAATGGAAATTTATCAAAGTTTTGCCTCAATTTTGAGCAGAAAAGCCAATATCACACATACCCTTGTCGTTTATTAGGATTTGGGAATGTTTTGAGTGATACCCAGAAAGCTTTTTCGGTACCCAATTGGAGTTTTGGTCAAACTGGGGTTATTTCTAGGTCATTTAGAAGTAGGGGTGTTTCTGTTATTGATAGTATTGGACCCAAGGGTCGTCATTTTTCGACATCGGTGGAGACCCGGGTGAATGAGAACAACTTTGAGAGGGTTTATGTTCAGGGTGGTATTAATGTGAAGCCTTTGGTGGTGGAAAGGATTGATAAGGATGATGAGAATGTTGTGGGGGAGGAACAGTCTAGGATAGAGGTTGCTGATGAAAATGTGAAGAATGCGGAGGGTTTGGATGAAGCTAAGGTTCTGAGTTCTGAGAGGGAGCTTTCAGATATTGAGAAGGAAGCTTGGAAGCTGTTGAGGGATTCGCTTGTGATGTATTGTGGGAGTCCTATTGGGACTGTGGCTGCAAACGATCCGAATGATAAGCAGCCATTGAATTATGATCAGGTGTTTATACGTGATTTTGTTCCGTCAGCACTTGCTTTCTTGCTCAATGGAGAAGGAGAGATTGTGAGGAACTTCCTGCTTCATACATTGCAATTGCAGAGTTGGGAAAAAACTGTTGATTGCTATAGCCCAGGGCAGGGATTGATGCCTGCAAGTTTTAAAGTTAGAACTGTGCCTCTTGATGAGAACAAGTTTGAAGAAGTTTTGGATCCAGATTTTGGTGAATCAGCTATTGGCCGTGTCGCACCTGTGGATTCTGGTTTGTGGTGGATTATTCTATTGAGGGCTTATGGAAAGATAACTGGTGACTATGGATTACAGGAAAGGGTGGATGTTCAGACAGGCTTGAAAATGATCCTACACTTGTGTTTAACTGATGGGTTTGATATGTTTCCTTCTCTTTTAGTTACGGATGGCTCCTGTATGATAGACCGTCGGATGGGTATTCACGGTCATCCCCTCGAGATCCAAGCCTTATTTTACTCGGCTCTAAGGTGCTCCCGTGAGATGCTTGCCGTAAATGATGGATCCAAGAATTTGGTAAGGGCTATCAACAACAGACTCAGTGCTTTGTCATTCCACATCAGAGAATATTACTGGGTGGATATGAAAAAGATTAATGAGATATATCGATATAAGACAGAGGAGTACTCTACAGAAGCCACCAACAAGTTTAATATATATCCTGAACAAATTCCTTTATGGTTAATGGACTGGATTCCAGAGGAAGGTGGATTCTTTATTGGCAATCTACAACCAGCTCACATGGACTTTAGGTTTTTCACTCTTGGAAATCTTTGGTCCATTGTTTCATCTTTGGGTACTCCAAAGCAAAATCAAGCTATATTGAATTTGGTTGAAGCCAAGTGGGATGATCTTGTGGGGCATATGCCACTTAAGATATGCTACCCTGCCTTGGAATATGAAGAGTGGCGTATAATCACTGGCAGCGACCCAAAGAATACCCCTTGGTCGTATCATAATGGTGGATCTTGGCCCACACTTCTGTGGCAGTTCACATTGGCATGCATCAAGATGGGCAGAACAGAACTAGCTGAAAAGGCAGTTGCTTTAGCTGAGAAGAGCCTGCGAGCTGACCGCTGGCCTGAATATTACGATACCAAAACTGGGAAATTTATTGGAAAACAATCTCGACTTTACCAAACGTGGACCATTGCCGGGTACCTTACAACTAAGATGCTGGTGGAGTATCCAGAGAAGGCGGCCTTATTATTCTGGGAGGAAGATTACGAGCTTCTTGAGATATGTGTTTGCGCACTTAGCAAGAGTGGCCGGAAAAAGTGCTCCAGAGGTGCAGCTAGGTCTCAGATTCTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004553 GO:0004564 GO:0004575 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009311 GO:0009313 GO:0009636 GO:0009987 GO:0010035 GO:0015926 GO:0016052 GO:0016787 GO:0016798 GO:0022622 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044262 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046352 GO:0046677 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0090599 GO:0099402 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_100

Protein Analysis

674

Amino Acids

76.56

Weight (kDa)

6.04

Isoelectric Point (pI)

41.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_100	PF12899	194 - 633	5.4e-223	Alkaline and neutral invertase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56560 AT3G05820 AT3G05820
fragaria_vesca	FvH4_6g07880 FvH4_6g07880 FvH4_6g07880
malus_domestica	MD04G1191300.v1.1
prunus_persica	Prupe.6G309800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0457581
rosa_laevigata	RLG00000025208
rosa_multiflora	Rmu_sc0005321.1_g000004 Rmu_sc0007404.1_g000002
rosa_roxburghii	Rroxscaffold_6G00421710
rosa_rugosa	Rorug03G0021600
rosa_samantha	Rh3AG082200 Rh3BG084500 Rh3CG084700 Rh3DG085900
rosa_wichuraiana	Rw3G007060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	333
Acc16I	TGCGCA	1 cut(s)	1960
Acc65I	GGTACC	2 cut(s)	244, 1866
AccB1I	GGYRCC	2 cut(s)	244, 1866
AccB7I	CCANNNNNTGG	1 cut(s)	902
AccII	CGCG	1 cut(s)	95
AciI	CCGC	3 cut(s)	515, 1783, 1907
AclWI	GGATC	8 cut(s)	644, 887, 900, 1033, 1144, 1206, 1219, 1681
AcoI	YGGCCR	2 cut(s)	919, 1975
AcsI	RAATTY	5 cut(s)	133, 1219, 1377, 1534, 1817
AfaI	GTAC	4 cut(s)	246, 1334, 1507, 1868
AfiI	CCNNNNNNNGG	8 cut(s)	820, 821, 902, 1123, 1412, 1600, 1812, 1863
AflII	CTTAAG	1 cut(s)	1580
AgsI	TTSAA	5 cut(s)	673, 881, 1033, 1534, 1544
AjnI	CCWGG	1 cut(s)	814
AjuI	GAANNNNNNNTTGG	2 cut(s)	900, 932
AleI	CACNNNNGTG	1 cut(s)	1690
Alw21I	GWGCWC	2 cut(s)	1184, 1991
Alw26I	GTCTC	2 cut(s)	353, 2013
AlwI	GGATC	8 cut(s)	644, 887, 900, 1033, 1144, 1206, 1219, 1681
Ama87I	CYCGRG	2 cut(s)	363, 1145
AoxI	GGCC	5 cut(s)	919, 1679, 1787, 1908, 1975
ApeKI	GCWGC	4 cut(s)	641, 664, 1632, 2000
ApoI	RAATTY	5 cut(s)	133, 1219, 1377, 1534, 1817
AseI	ATTAAT	2 cut(s)	411, 1302
Asp700I	GAANNNNTTC	1 cut(s)	1377
Asp718I	GGTACC	2 cut(s)	244, 1866
AspLEI	GCGC	2 cut(s)	97, 1961
AspS9I	GGNCC	4 cut(s)	326, 1485, 1680, 1854
AsuC2I	CCSGG	3 cut(s)	364, 365, 1864
AsuHPI	GGTGA	3 cut(s)	379, 917, 1001
AsuII	TTCGAA	1 cut(s)	70
AvaI	CYCGRG	2 cut(s)	363, 1145
AvaII	GGWCC	3 cut(s)	326, 1485, 1854
BamHI	GGATCC	2 cut(s)	892, 1211
BanI	GGYRCC	2 cut(s)	244, 1866
Bbv12I	GWGCWC	2 cut(s)	1184, 1991
BbvI	GCAGC	4 cut(s)	628, 676, 1644, 2012
BccI	CCATC	5 cut(s)	1055, 1091, 1117, 1202, 1714
BceAI	ACGGC	2 cut(s)	906, 1184
BciT130I	CCWGG	1 cut(s)	816
BciVI	GTATCC	1 cut(s)	1905
BclI	TGATCA	1 cut(s)	679
BcnI	CCSGG	3 cut(s)	364, 365, 1864
BcoDI	GTCTC	2 cut(s)	353, 2013
BfaI	CTAG	4 cut(s)	282, 480, 1736, 2004
BfmI	CTRYAG	2 cut(s)	808, 1338
BfrI	CTTAAG	1 cut(s)	1580
BfuI	GTATCC	1 cut(s)	1905
BisI	GCNGC	5 cut(s)	642, 665, 1633, 1908, 2001
BlsI	GCNGC	5 cut(s)	643, 666, 1634, 1909, 2002
BmcAI	AGTACT	1 cut(s)	1334
Bme1390I	CCNGG	4 cut(s)	364, 365, 816, 1864
Bme18I	GGWCC	3 cut(s)	326, 1485, 1854
BmeT110I	CYCGRG	2 cut(s)	363, 1145
BmgT120I	GGNCC	4 cut(s)	326, 1485, 1680, 1854
BmiI	GGNNCC	6 cut(s)	246, 328, 894, 1102, 1213, 1868
BmrFI	CCNGG	4 cut(s)	364, 365, 816, 1864
BmrI	ACTGGG	3 cut(s)	279, 1291, 1821
BmsI	GCATC	4 cut(s)	819, 1182, 1722, 1872
BmuI	ACTGGG	3 cut(s)	279, 1291, 1821
BplI	GAGNNNNNCTC	2 cut(s)	1319, 1351
BpmI	CTGGAG	1 cut(s)	1975
Bpu10I	CCTNAGC	1 cut(s)	534
Bpu14I	TTCGAA	1 cut(s)	70
BpuEI	CTTGAG	1 cut(s)	1964
BpuMI	CCSGG	3 cut(s)	364, 365, 1864
Bsa29I	ATCGAT	1 cut(s)	1315
BsaAI	YACGTR	1 cut(s)	695
BsaI	GGTCTC	2 cut(s)	353, 2013
BsaJI	CCNNGG	6 cut(s)	330, 363, 814, 815, 1599, 1652
BsaXI	ACNNNNNCTCC	6 cut(s)	247, 277, 461, 491, 732, 762
Bsc4I	CCNNNNNNNGG	8 cut(s)	820, 821, 902, 1123, 1412, 1600, 1812, 1863
Bse1I	ACTGG	6 cut(s)	274, 991, 1286, 1403, 1633, 1816
Bse3DI	GCAATG	2 cut(s)	770, 1857
BseBI	CCWGG	1 cut(s)	816
BseCI	ATCGAT	1 cut(s)	1315
BseDI	CCNNGG	6 cut(s)	330, 363, 814, 815, 1599, 1652
BseGI	GGATG	7 cut(s)	454, 532, 1021, 1102, 1128, 1138, 1561
BseLI	CCNNNNNNNGG	8 cut(s)	820, 821, 902, 1123, 1412, 1600, 1812, 1863
BseMI	GCAATG	2 cut(s)	770, 1857
BseMII	CTCAG	6 cut(s)	50, 533, 540, 1261, 1752, 2024
BseNI	ACTGG	6 cut(s)	274, 991, 1286, 1403, 1633, 1816
BseRI	GAGGAG	1 cut(s)	1343
BseXI	GCAGC	4 cut(s)	628, 676, 1644, 2012
BsgI	GTGCAG	1 cut(s)	2019
Bsh1236I	CGCG	1 cut(s)	95
BshFI	GGCC	5 cut(s)	921, 1681, 1789, 1910, 1977
BshNI	GGYRCC	2 cut(s)	244, 1866
BshVI	ATCGAT	1 cut(s)	1315
BsiHKAI	GWGCWC	2 cut(s)	1184, 1991
BsiHKCI	CYCGRG	2 cut(s)	363, 1145
BsiSI	CCGG	3 cut(s)	364, 1863, 1978
BslFI	GGGAC	1 cut(s)	646
BslI	CCNNNNNNNGG	8 cut(s)	820, 821, 902, 1123, 1412, 1600, 1812, 1863
BsmAI	GTCTC	2 cut(s)	353, 2013
BsmFI	GGGAC	1 cut(s)	646
BsmI	GAATGC	1 cut(s)	517
BsnI	GGCC	5 cut(s)	921, 1681, 1789, 1910, 1977
Bso31I	GGTCTC	2 cut(s)	353, 2013
BsoBI	CYCGRG	2 cut(s)	363, 1145
Bsp119I	TTCGAA	1 cut(s)	70
Bsp1286I	GDGCHC	2 cut(s)	1184, 1991
Bsp143I	GATC	8 cut(s)	649, 679, 892, 1038, 1149, 1211, 1558, 1673
BspACI	CCGC	3 cut(s)	515, 1783, 1907
BspANI	GGCC	5 cut(s)	921, 1681, 1789, 1910, 1977
BspCNI	CTCAG	6 cut(s)	51, 534, 541, 1260, 1753, 2023
BspDI	ATCGAT	1 cut(s)	1315
BspFNI	CGCG	1 cut(s)	95
BspLI	GGNNCC	6 cut(s)	246, 328, 894, 1102, 1213, 1868
BspPI	GGATC	8 cut(s)	644, 887, 900, 1033, 1144, 1206, 1219, 1681
BspQI	GCTCTTC	1 cut(s)	1760
BspT104I	TTCGAA	1 cut(s)	70
BspT107I	GGYRCC	2 cut(s)	244, 1866
BspTI	CTTAAG	1 cut(s)	1580
BspTNI	GGTCTC	2 cut(s)	353, 2013
BsrDI	GCAATG	2 cut(s)	770, 1857
BsrI	ACTGG	6 cut(s)	274, 991, 1286, 1403, 1633, 1816
BssECI	CCNNGG	6 cut(s)	330, 363, 814, 815, 1599, 1652
BssMI	GATC	8 cut(s)	649, 679, 892, 1038, 1149, 1211, 1558, 1673
BssT1I	CCWWGG	3 cut(s)	330, 1599, 1652
Bst2UI	CCWGG	1 cut(s)	816
Bst4CI	ACNGT	6 cut(s)	477, 637, 799, 856, 1118, 1136
Bst6I	CTCTTC	2 cut(s)	1605, 1760
BstAFI	CTTAAG	1 cut(s)	1580
BstBAI	YACGTR	1 cut(s)	695
BstBI	TTCGAA	1 cut(s)	70
BstC8I	GCNNGC	6 cut(s)	834, 1197, 1711, 1772, 1776, 1787
BstF5I	GGATG	7 cut(s)	454, 532, 1021, 1102, 1128, 1138, 1561
BstFNI	CGCG	1 cut(s)	95
BstHHI	GCGC	2 cut(s)	97, 1961
BstKTI	GATC	8 cut(s)	652, 682, 895, 1041, 1152, 1214, 1561, 1676
BstMAI	GTCTC	2 cut(s)	353, 2013
BstMBI	GATC	8 cut(s)	649, 679, 892, 1038, 1149, 1211, 1558, 1673
BstMWI	GCNNNNNNNGC	3 cut(s)	1745, 1965, 1974
BstNI	CCWGG	1 cut(s)	816
BstNSI	RCATGY	1 cut(s)	1713
BstSCI	CCNGG	4 cut(s)	362, 363, 814, 1862
BstSFI	CTRYAG	2 cut(s)	808, 1338
BstUI	CGCG	1 cut(s)	95
BstV1I	GCAGC	4 cut(s)	628, 676, 1644, 2012
BstX2I	RGATCY	4 cut(s)	892, 1149, 1211, 1673
BstXI	CCANNNNNNTGG	1 cut(s)	1222
BstYI	RGATCY	4 cut(s)	892, 1149, 1211, 1673
Bsu15I	ATCGAT	1 cut(s)	1315
BsuI	GTATCC	1 cut(s)	1905
BsuRI	GGCC	5 cut(s)	921, 1681, 1789, 1910, 1977
BsuTUI	ATCGAT	1 cut(s)	1315
BtsCI	GGATG	7 cut(s)	454, 532, 1021, 1102, 1128, 1138, 1561
BtsIMutI	CAGTG	2 cut(s)	1255, 1626
Cac8I	GCNNGC	6 cut(s)	834, 1197, 1711, 1772, 1776, 1787
CfoI	GCGC	2 cut(s)	97, 1961
Cfr13I	GGNCC	4 cut(s)	326, 1485, 1680, 1854
Cfr9I	CCCGGG	1 cut(s)	363
ClaI	ATCGAT	1 cut(s)	1315
Csp6I	GTAC	4 cut(s)	245, 1333, 1506, 1867
CviAII	CATG	2 cut(s)	1450, 1710
CviQI	GTAC	4 cut(s)	245, 1333, 1506, 1867
DpnI	GATC	8 cut(s)	651, 681, 894, 1040, 1151, 1213, 1560, 1675
DpnII	GATC	8 cut(s)	649, 679, 892, 1038, 1149, 1211, 1558, 1673
DraI	TTTAAA	1 cut(s)	844
DrdI	GACNNNNNNGTC	1 cut(s)	333
DseDI	GACNNNNNNGTC	1 cut(s)	333
EaeI	YGGCCR	2 cut(s)	919, 1975
Eam1104I	CTCTTC	2 cut(s)	1605, 1760
EarI	CTCTTC	2 cut(s)	1605, 1760
Eco130I	CCWWGG	3 cut(s)	330, 1599, 1652
Eco31I	GGTCTC	2 cut(s)	353, 2013
Eco47I	GGWCC	3 cut(s)	326, 1485, 1854
Eco88I	CYCGRG	2 cut(s)	363, 1145
EcoRII	CCWGG	1 cut(s)	814
EcoT14I	CCWWGG	3 cut(s)	330, 1599, 1652
EcoT22I	ATGCAT	1 cut(s)	1715
ErhI	CCWWGG	3 cut(s)	330, 1599, 1652
FaeI	CATG	2 cut(s)	1453, 1713
FalI	AAGNNNNNCTT	2 cut(s)	1895, 1927
FaqI	GGGAC	1 cut(s)	646
FatI	CATG	2 cut(s)	1449, 1709
FauNDI	CATATG	1 cut(s)	1572
FbaI	TGATCA	1 cut(s)	679
Fnu4HI	GCNGC	5 cut(s)	642, 665, 1633, 1908, 2001
FokI	GGATG	7 cut(s)	461, 539, 1028, 1109, 1125, 1135, 1568
Fsp4HI	GCNGC	5 cut(s)	642, 665, 1633, 1908, 2001
FspBI	CTAG	4 cut(s)	282, 480, 1736, 2004
FspI	TGCGCA	1 cut(s)	1960
GlaI	GCGC	2 cut(s)	96, 1960
GluI	GCNGC	5 cut(s)	642, 665, 1633, 1908, 2001
GsuI	CTGGAG	1 cut(s)	1975
HaeIII	GGCC	5 cut(s)	921, 1681, 1789, 1910, 1977
HapII	CCGG	3 cut(s)	364, 1863, 1978
HhaI	GCGC	2 cut(s)	97, 1961
Hin1II	CATG	2 cut(s)	1453, 1713
Hin6I	GCGC	2 cut(s)	95, 1959
HinP1I	GCGC	2 cut(s)	95, 1959
HindIII	AAGCTT	2 cut(s)	234, 579
HinfI	GANTC	9 cut(s)	54, 599, 622, 908, 938, 1245, 1402, 1419, 2014
HpaII	CCGG	3 cut(s)	364, 1863, 1978
HphI	GGTGA	3 cut(s)	379, 917, 1001
Hpy166II	GTNNAC	2 cut(s)	1701, 1854
Hpy188I	TCNGA	8 cut(s)	543, 550, 565, 654, 1023, 1122, 1271, 2013
Hpy8I	GTNNAC	2 cut(s)	1701, 1854
Hpy99I	CGWCG	1 cut(s)	1122
HpyAV	CCTTC	5 cut(s)	568, 731, 1089, 1406, 1897
HpyCH4III	ACNGT	6 cut(s)	477, 637, 799, 856, 1118, 1136
HpyCH4IV	ACGT	2 cut(s)	694, 1850
HpyCH4V	TGCA	6 cut(s)	644, 775, 781, 836, 1713, 2000
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1745, 1965, 1974
HpySE526I	ACGT	2 cut(s)	694, 1850
Hsp92II	CATG	2 cut(s)	1453, 1713
HspAI	GCGC	2 cut(s)	95, 1959
KpnI	GGTACC	2 cut(s)	248, 1870
Ksp22I	TGATCA	1 cut(s)	679
Kzo9I	GATC	8 cut(s)	649, 679, 892, 1038, 1149, 1211, 1558, 1673
LguI	GCTCTTC	1 cut(s)	1760
LmnI	GCTCC	4 cut(s)	556, 1106, 1187, 1994
Lsp1109I	GCAGC	4 cut(s)	628, 676, 1644, 2012
LweI	GCATC	4 cut(s)	819, 1182, 1722, 1872
MaeI	CTAG	4 cut(s)	282, 480, 1736, 2004
MaeII	ACGT	2 cut(s)	694, 1850
MaeIII	GTNAC	2 cut(s)	989, 1090
MalI	GATC	8 cut(s)	651, 681, 894, 1040, 1151, 1213, 1560, 1675
MboI	GATC	8 cut(s)	649, 679, 892, 1038, 1149, 1211, 1558, 1673
MboII	GAAGA	5 cut(s)	520, 893, 1622, 1777, 1940
MfeI	CAATTG	2 cut(s)	250, 776
MflI	RGATCY	4 cut(s)	892, 1149, 1211, 1673
MhlI	GDGCHC	2 cut(s)	1184, 1991
MluCI	AATT	9 cut(s)	133, 154, 250, 673, 776, 1219, 1377, 1534, 1817
MlyI	GAGTC	2 cut(s)	631, 1239
MmeI	TCCRAC	1 cut(s)	1100
Mph1103I	ATGCAT	1 cut(s)	1715
MroXI	GAANNNNTTC	1 cut(s)	1377
MseI	TTAA	8 cut(s)	102, 411, 843, 1055, 1302, 1359, 1391, 1581
MslI	CAYNNNNRTG	4 cut(s)	1668, 1690, 1708, 1718
MspA1I	CMGCKG	1 cut(s)	1785
MspCI	CTTAAG	1 cut(s)	1580
MspI	CCGG	3 cut(s)	364, 1863, 1978
MspR9I	CCNGG	4 cut(s)	364, 365, 816, 1864
MunI	CAATTG	2 cut(s)	250, 776
Mva1269I	GAATGC	1 cut(s)	517
MvaI	CCWGG	1 cut(s)	816
MvnI	CGCG	1 cut(s)	95
MwoI	GCNNNNNNNGC	3 cut(s)	1745, 1965, 1974
NciI	CCSGG	3 cut(s)	364, 365, 1864
NdeI	CATATG	1 cut(s)	1572
NdeII	GATC	8 cut(s)	649, 679, 892, 1038, 1149, 1211, 1558, 1673
NlaIII	CATG	2 cut(s)	1453, 1713
NlaIV	GGNNCC	6 cut(s)	246, 328, 894, 1102, 1213, 1868
NmeAIII	GCCGAG	1 cut(s)	1148
NmuCI	GTSAC	1 cut(s)	989
NsbI	TGCGCA	1 cut(s)	1960
NsiI	ATGCAT	1 cut(s)	1715
NspI	RCATGY	1 cut(s)	1713
NspV	TTCGAA	1 cut(s)	70
OliI	CACNNNNGTG	1 cut(s)	1690
PaeI	GCATGC	1 cut(s)	1713
PaeR7I	CTCGAG	1 cut(s)	1145
PasI	CCCWGGG	1 cut(s)	815
PciSI	GCTCTTC	1 cut(s)	1760
PctI	GAATGC	1 cut(s)	517
PdmI	GAANNNNTTC	1 cut(s)	1377
PfeI	GAWTC	7 cut(s)	54, 599, 908, 938, 1402, 1419, 2014
PflMI	CCANNNNNTGG	1 cut(s)	902
PkrI	GCNGC	5 cut(s)	643, 666, 1634, 1909, 2002
PleI	GAGTC	2 cut(s)	630, 1239
PpsI	GAGTC	2 cut(s)	630, 1239
Ppu21I	YACGTR	1 cut(s)	695
PshBI	ATTAAT	2 cut(s)	411, 1302
Psp6I	CCWGG	1 cut(s)	814
PspGI	CCWGG	1 cut(s)	814
PspN4I	GGNNCC	6 cut(s)	246, 328, 894, 1102, 1213, 1868
PspPI	GGNCC	4 cut(s)	326, 1485, 1680, 1854
PsuI	RGATCY	4 cut(s)	892, 1149, 1211, 1673
RsaI	GTAC	4 cut(s)	246, 1334, 1507, 1868
RsaNI	GTAC	4 cut(s)	245, 1333, 1506, 1867
RseI	CAYNNNNRTG	4 cut(s)	1668, 1690, 1708, 1718
SapI	GCTCTTC	1 cut(s)	1760
SaqAI	TTAA	8 cut(s)	102, 411, 843, 1055, 1302, 1359, 1391, 1581
SatI	GCNGC	5 cut(s)	642, 665, 1633, 1908, 2001
Sau3AI	GATC	8 cut(s)	649, 679, 892, 1038, 1149, 1211, 1558, 1673
Sau96I	GGNCC	4 cut(s)	326, 1485, 1680, 1854
ScaI	AGTACT	1 cut(s)	1334
SchI	GAGTC	2 cut(s)	631, 1239
ScrFI	CCNGG	4 cut(s)	364, 365, 816, 1864
SduI	GDGCHC	2 cut(s)	1184, 1991
SfaNI	GCATC	4 cut(s)	819, 1182, 1722, 1872
SfcI	CTRYAG	2 cut(s)	808, 1338
Sfr274I	CTCGAG	1 cut(s)	1145
SfuI	TTCGAA	1 cut(s)	70
SinI	GGWCC	3 cut(s)	326, 1485, 1854
SlaI	CTCGAG	1 cut(s)	1145
SmaI	CCCGGG	1 cut(s)	365
SmiMI	CAYNNNNRTG	4 cut(s)	1668, 1690, 1708, 1718
SmlI	CTYRAG	3 cut(s)	1145, 1580, 1943
SmoI	CTYRAG	3 cut(s)	1145, 1580, 1943
SphI	GCATGC	1 cut(s)	1713
Sse9I	AATT	9 cut(s)	133, 154, 250, 673, 776, 1219, 1377, 1534, 1817
SsiI	CCGC	3 cut(s)	515, 1783, 1907
SspI	AATATT	2 cut(s)	1277, 1796
SspMI	CTAG	4 cut(s)	282, 480, 1736, 2004
StyD4I	CCNGG	4 cut(s)	362, 363, 814, 1862
StyI	CCWWGG	3 cut(s)	330, 1599, 1652
TaaI	ACNGT	6 cut(s)	477, 637, 799, 856, 1118, 1136
TaiI	ACGT	2 cut(s)	697, 1853
TaqI	TCGA	5 cut(s)	70, 347, 1146, 1315, 1837
TasI	AATT	9 cut(s)	133, 154, 250, 673, 776, 1219, 1377, 1534, 1817
TatI	WGTACW	1 cut(s)	1332
TauI	GCSGC	1 cut(s)	1910
TfiI	GAWTC	7 cut(s)	54, 599, 908, 938, 1402, 1419, 2014
Tru1I	TTAA	8 cut(s)	102, 411, 843, 1055, 1302, 1359, 1391, 1581
Tru9I	TTAA	8 cut(s)	102, 411, 843, 1055, 1302, 1359, 1391, 1581
TscAI	CASTG	2 cut(s)	1255, 1633
TseFI	GTSAC	1 cut(s)	989
TseI	GCWGC	4 cut(s)	641, 664, 1632, 2000
Tsp45I	GTSAC	1 cut(s)	989
TspDTI	ATGAA	7 cut(s)	53, 513, 543, 755, 1307, 1485, 1623
TspGWI	ACGGA	2 cut(s)	696, 1109
TspMI	CCCGGG	1 cut(s)	363
TspRI	CASTG	2 cut(s)	1255, 1633
Van91I	CCANNNNNTGG	1 cut(s)	902
Vha464I	CTTAAG	1 cut(s)	1580
VpaK11BI	GGWCC	3 cut(s)	326, 1485, 1854
VspI	ATTAAT	2 cut(s)	411, 1302
XapI	RAATTY	5 cut(s)	133, 1219, 1377, 1534, 1817
XceI	RCATGY	1 cut(s)	1713
XhoI	CTCGAG	1 cut(s)	1145
XmaI	CCCGGG	1 cut(s)	363
XmnI	GAANNNNTTC	1 cut(s)	1377
XspI	CTAG	4 cut(s)	282, 480, 1736, 2004
ZrmI	AGTACT	1 cut(s)	1334
Zsp2I	ATGCAT	1 cut(s)	1715

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.