Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011833

Physical Location & Seq

Genomic Coordinates Reverse (-)

6645701 .. 6649817

Gene Structure 4117 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42433

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGATTTCCCTTAGTTTTCTTTGTCATTCTACAATGAAACCCACTTGTAGAATCCTGAGTAGTATTCGAAACTCTGCGTTTTTCGGGTTCGCGCCTGTTAAAATCCACAATGGGTCAGCAAAGAATGGAAATTTATCAAAGTTGTGCATCAATTTTGAGCAGAAAAGCCAATATCACACATACCCTTGTCGTGTATTAGGATTTGGGAGTGTTTTGAGTGATACCCAGAAAGCCTTTTCGGTACCCAATTGGAGTTTTGGCCAATCTGGGGTTGTTTCTAGGTCATTTAGAAGTAGGGGTGTTTCTGTTATTGATAGTATTGGACCCAAGGGTCGTGATTTTTCGACATCGGTGGAGACCCGGGTGAATGAGAACAACTTTGAGAGGGTTTATGTTCAGGGTGGTATTAATGTGAAGCCTTTGGTGGTGGAAAGGATTGATAAGGATGAGAATGTTGTGGGGGAGGAACAGTCTAGGATAGAGGTTGCTGATGAAAATGTGGAGGGTTTGGATGAAGCTAAGGTTCTGAGTTCTGAGAGGGAGCTTTCGGATATTGAGAAGGAAGCTTGGAAGCTGTTGAGGGATTCGCTTGTGATGTATTGTGGGAGTCCTATTGGGACTATGGCTGCAAATGATCCGAATGATAAGCAGCCATTGAATTATGATCAGGTGTTTATACGTGATTTTGTTCCGTCAGCACTTGCTTTCTTGCTCAACGGAGAAGGAGAGATTGTGAGGAACTTCCTGCTTCATACATTGCAATTGCAGAGTTGGGAAAAAACTGTTGATTGCTATAGCCCAGGGCAGGGATTGATGCCTGCAAGTTTTAAAGTCAGAACTGTGCCTCTCGATGAGAACAAGTTTGAAGAAGTTTTGGATCCAGATTTTGGTGAATCAGCTATTGGCCGAGTTGCACCTGTGGATTCTGGTTTGTGGTGGATTATTCTATTGAGGGCTTATGGAAAGATAACTGGTGACTATGGATTACAGGAAAGGGTGGATGTTCAGACAGGCTTGAAAATGATCCTGCACTTGTGTTTAACTGATGGGTTTGATATGTTTCCTTCTCTTTTAGTCACGGATGGCTCCTGTATGATAGACCGTCGAATGGGTATTCACGGTCATCCCCTCGAGATCCAAGCCTTATTTTACTCGGCTCTAAGGTGCTCCCGTGAGATGCTTGCCGTAAATGATGGATCCAAGAATTTGGTAAGGGCTATCAACAACAGACTCAGTGCTTTGTCATTCCACATCAGAGAATATTACTGGGTGGATATGAAAAAGATTAATGAGATATATCGATATAAGACAGAGGAGTACTCTACAGAAGCCACCAACAAGTTTAATATATATCCTGAACAAATTCCTTTATGGTTAATGGACTGGATTCCAGAGGAAGGTGGATTCTTTATTGGCAATCTACAACCAGCTCACATGGACTTTAGGTTTTTCACTCTTGGAAATCTTTGGTCCATTGTTTCATCTTTGGGTACTCCAAAGCAAAATCAAGCTATATTGAATTTGGTTGAAGCCAAGTGGGATGATCTTGTGGGGCATATGCCACTTAAGATATGCTATCCTGCCCTGGAATATGAAGAGTGGCGTATAATCACTGGCAGCGACCCAAAGAATACCCCTTGGTCGTATCATAATGGTGGATCTTGGCCCACACTTCTGTGGCAGTTCACATTGGCATGCATCAAGATGGGCAGAACAGAACTAGCTGAAAAGGCAGTTGCTTTAGCTGAGAAGAGCCTGCGAGCTGACCGCTGGCCTGAATATTACGATACCAAAACTGGGAAATTTATTGGAAAGCAATCTCGACTTTACCAAACGTGGACCATTGCCGGGTACCTTACAACTAAGATGCTGGTGGAGAATCCAGAGAAGGCGGCCTTATTATTCTGGGAGGAAGATTACGAGCTTCTGGAGATATGTGTTTGCGCACTTAGCAAAAGTGGCCGGAAAAAGTGCTCCAGAGGTGCAGCTAGGTCTCAGATTCTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004553 GO:0004564 GO:0004575 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009311 GO:0009313 GO:0009636 GO:0009987 GO:0010035 GO:0015926 GO:0016052 GO:0016787 GO:0016798 GO:0022622 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042542 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044262 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046352 GO:0046677 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0090599 GO:0099402 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_100

Protein Analysis

669

Amino Acids

75.9

Weight (kDa)

5.9

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_100	PF12899	189 - 628	2.8e-223	Alkaline and neutral invertase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011833)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56560 AT3G05820 AT3G05820
fragaria_vesca	FvH4_6g07880 FvH4_6g07880 FvH4_6g07880
malus_domestica	MD04G1191300.v1.1
prunus_persica	Prupe.6G309800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0457581
rosa_laevigata	RLG00000025208
rosa_multiflora	Rmu_sc0005321.1_g000004 Rmu_sc0007404.1_g000002
rosa_roxburghii	Rroxscaffold_6G00421710
rosa_rugosa	Rorug03G0021600
rosa_samantha	Rh3AG082200 Rh3BG084500 Rh3CG084700 Rh3DG085900
rosa_wichuraiana	Rw3G007060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	330
Acc16I	TGCGCA	1 cut(s)	1945
Acc65I	GGTACC	2 cut(s)	241, 1851
AccB1I	GGYRCC	2 cut(s)	241, 1851
AccB7I	CCANNNNNTGG	1 cut(s)	887
AccII	CGCG	1 cut(s)	92
AciI	CCGC	2 cut(s)	1768, 1892
AclWI	GGATC	8 cut(s)	629, 872, 885, 1018, 1129, 1191, 1204, 1666
AcoI	YGGCCR	3 cut(s)	259, 904, 1960
AcsI	RAATTY	5 cut(s)	130, 1204, 1362, 1519, 1802
AfaI	GTAC	4 cut(s)	243, 1319, 1492, 1853
AfiI	CCNNNNNNNGG	8 cut(s)	268, 805, 806, 887, 1108, 1397, 1797, 1848
AflII	CTTAAG	1 cut(s)	1565
AgsI	TTSAA	5 cut(s)	658, 866, 1018, 1519, 1529
AjnI	CCWGG	2 cut(s)	799, 1584
AjuI	GAANNNNNNNTTGG	2 cut(s)	885, 917
AleI	CACNNNNGTG	1 cut(s)	1675
Alw21I	GWGCWC	2 cut(s)	1169, 1976
Alw26I	GTCTC	2 cut(s)	350, 1998
AlwI	GGATC	8 cut(s)	629, 872, 885, 1018, 1129, 1191, 1204, 1666
Ama87I	CYCGRG	2 cut(s)	360, 1130
AoxI	GGCC	6 cut(s)	259, 904, 1664, 1772, 1893, 1960
ApeKI	GCWGC	4 cut(s)	626, 649, 1617, 1985
ApoI	RAATTY	5 cut(s)	130, 1204, 1362, 1519, 1802
AseI	ATTAAT	2 cut(s)	408, 1287
Asp700I	GAANNNNTTC	1 cut(s)	1362
Asp718I	GGTACC	2 cut(s)	241, 1851
AspLEI	GCGC	2 cut(s)	94, 1946
AspS9I	GGNCC	4 cut(s)	323, 1470, 1665, 1839
AsuC2I	CCSGG	3 cut(s)	361, 362, 1849
AsuHPI	GGTGA	3 cut(s)	376, 902, 986
AsuII	TTCGAA	1 cut(s)	67
AvaI	CYCGRG	2 cut(s)	360, 1130
AvaII	GGWCC	3 cut(s)	323, 1470, 1839
BalI	TGGCCA	1 cut(s)	261
BamHI	GGATCC	2 cut(s)	877, 1196
BanI	GGYRCC	2 cut(s)	241, 1851
Bbv12I	GWGCWC	2 cut(s)	1169, 1976
BbvI	GCAGC	4 cut(s)	613, 661, 1629, 1997
BccI	CCATC	4 cut(s)	1040, 1076, 1187, 1699
BceAI	ACGGC	1 cut(s)	1169
BciT130I	CCWGG	2 cut(s)	801, 1586
BclI	TGATCA	1 cut(s)	664
BcnI	CCSGG	3 cut(s)	361, 362, 1849
BcoDI	GTCTC	2 cut(s)	350, 1998
BfaI	CTAG	4 cut(s)	279, 474, 1721, 1989
BfmI	CTRYAG	2 cut(s)	793, 1323
BfrI	CTTAAG	1 cut(s)	1565
BisI	GCNGC	5 cut(s)	627, 650, 1618, 1893, 1986
BlsI	GCNGC	5 cut(s)	628, 651, 1619, 1894, 1987
BmcAI	AGTACT	1 cut(s)	1319
Bme1390I	CCNGG	5 cut(s)	361, 362, 801, 1586, 1849
Bme18I	GGWCC	3 cut(s)	323, 1470, 1839
BmeT110I	CYCGRG	2 cut(s)	360, 1130
BmgT120I	GGNCC	4 cut(s)	323, 1470, 1665, 1839
BmiI	GGNNCC	6 cut(s)	243, 325, 879, 1087, 1198, 1853
BmrFI	CCNGG	5 cut(s)	361, 362, 801, 1586, 1849
BmrI	ACTGGG	2 cut(s)	1276, 1806
BmsI	GCATC	5 cut(s)	156, 804, 1167, 1707, 1857
BmuI	ACTGGG	2 cut(s)	1276, 1806
BplI	GAGNNNNNCTC	2 cut(s)	1304, 1336
BpmI	CTGGAG	2 cut(s)	1949, 1960
Bpu10I	CCTNAGC	1 cut(s)	519
Bpu14I	TTCGAA	1 cut(s)	67
BpuMI	CCSGG	3 cut(s)	361, 362, 1849
Bsa29I	ATCGAT	1 cut(s)	1300
BsaAI	YACGTR	1 cut(s)	680
BsaI	GGTCTC	2 cut(s)	350, 1998
BsaJI	CCNNGG	6 cut(s)	327, 360, 799, 800, 1584, 1637
BsaXI	ACNNNNNCTCC	4 cut(s)	455, 485, 717, 747
Bsc4I	CCNNNNNNNGG	8 cut(s)	268, 805, 806, 887, 1108, 1397, 1797, 1848
Bse1I	ACTGG	5 cut(s)	976, 1271, 1388, 1618, 1801
Bse3DI	GCAATG	2 cut(s)	755, 1842
BseBI	CCWGG	2 cut(s)	801, 1586
BseCI	ATCGAT	1 cut(s)	1300
BseDI	CCNNGG	6 cut(s)	327, 360, 799, 800, 1584, 1637
BseGI	GGATG	6 cut(s)	451, 517, 1006, 1087, 1123, 1546
BseLI	CCNNNNNNNGG	8 cut(s)	268, 805, 806, 887, 1108, 1397, 1797, 1848
BseMI	GCAATG	2 cut(s)	755, 1842
BseMII	CTCAG	6 cut(s)	47, 518, 525, 1246, 1737, 2009
BseNI	ACTGG	5 cut(s)	976, 1271, 1388, 1618, 1801
BseRI	GAGGAG	1 cut(s)	1328
BseXI	GCAGC	4 cut(s)	613, 661, 1629, 1997
BsgI	GTGCAG	2 cut(s)	1013, 2004
Bsh1236I	CGCG	1 cut(s)	92
BshFI	GGCC	6 cut(s)	261, 906, 1666, 1774, 1895, 1962
BshNI	GGYRCC	2 cut(s)	241, 1851
BshVI	ATCGAT	1 cut(s)	1300
BsiHKAI	GWGCWC	2 cut(s)	1169, 1976
BsiHKCI	CYCGRG	2 cut(s)	360, 1130
BsiSI	CCGG	3 cut(s)	361, 1848, 1963
BslFI	GGGAC	1 cut(s)	631
BslI	CCNNNNNNNGG	8 cut(s)	268, 805, 806, 887, 1108, 1397, 1797, 1848
BsmAI	GTCTC	2 cut(s)	350, 1998
BsmFI	GGGAC	1 cut(s)	631
BsnI	GGCC	6 cut(s)	261, 906, 1666, 1774, 1895, 1962
Bso31I	GGTCTC	2 cut(s)	350, 1998
BsoBI	CYCGRG	2 cut(s)	360, 1130
Bsp119I	TTCGAA	1 cut(s)	67
Bsp1286I	GDGCHC	2 cut(s)	1169, 1976
Bsp143I	GATC	8 cut(s)	634, 664, 877, 1023, 1134, 1196, 1543, 1658
BspACI	CCGC	2 cut(s)	1768, 1892
BspANI	GGCC	6 cut(s)	261, 906, 1666, 1774, 1895, 1962
BspCNI	CTCAG	6 cut(s)	48, 519, 526, 1245, 1738, 2008
BspDI	ATCGAT	1 cut(s)	1300
BspFNI	CGCG	1 cut(s)	92
BspLI	GGNNCC	6 cut(s)	243, 325, 879, 1087, 1198, 1853
BspPI	GGATC	8 cut(s)	629, 872, 885, 1018, 1129, 1191, 1204, 1666
BspQI	GCTCTTC	1 cut(s)	1745
BspT104I	TTCGAA	1 cut(s)	67
BspT107I	GGYRCC	2 cut(s)	241, 1851
BspTI	CTTAAG	1 cut(s)	1565
BspTNI	GGTCTC	2 cut(s)	350, 1998
BsrDI	GCAATG	2 cut(s)	755, 1842
BsrI	ACTGG	5 cut(s)	976, 1271, 1388, 1618, 1801
BssECI	CCNNGG	6 cut(s)	327, 360, 799, 800, 1584, 1637
BssMI	GATC	8 cut(s)	634, 664, 877, 1023, 1134, 1196, 1543, 1658
BssT1I	CCWWGG	2 cut(s)	327, 1637
Bst2UI	CCWGG	2 cut(s)	801, 1586
Bst4CI	ACNGT	5 cut(s)	471, 784, 841, 1103, 1121
Bst6I	CTCTTC	2 cut(s)	1590, 1745
BstAFI	CTTAAG	1 cut(s)	1565
BstBAI	YACGTR	1 cut(s)	680
BstBI	TTCGAA	1 cut(s)	67
BstC8I	GCNNGC	6 cut(s)	819, 1182, 1696, 1757, 1761, 1772
BstF5I	GGATG	6 cut(s)	451, 517, 1006, 1087, 1123, 1546
BstFNI	CGCG	1 cut(s)	92
BstHHI	GCGC	2 cut(s)	94, 1946
BstKTI	GATC	8 cut(s)	637, 667, 880, 1026, 1137, 1199, 1546, 1661
BstMAI	GTCTC	2 cut(s)	350, 1998
BstMBI	GATC	8 cut(s)	634, 664, 877, 1023, 1134, 1196, 1543, 1658
BstMWI	GCNNNNNNNGC	3 cut(s)	1730, 1950, 1959
BstNI	CCWGG	2 cut(s)	801, 1586
BstNSI	RCATGY	1 cut(s)	1698
BstSCI	CCNGG	5 cut(s)	359, 360, 799, 1584, 1847
BstSFI	CTRYAG	2 cut(s)	793, 1323
BstUI	CGCG	1 cut(s)	92
BstV1I	GCAGC	4 cut(s)	613, 661, 1629, 1997
BstX2I	RGATCY	4 cut(s)	877, 1134, 1196, 1658
BstXI	CCANNNNNNTGG	1 cut(s)	1207
BstYI	RGATCY	4 cut(s)	877, 1134, 1196, 1658
Bsu15I	ATCGAT	1 cut(s)	1300
BsuRI	GGCC	6 cut(s)	261, 906, 1666, 1774, 1895, 1962
BsuTUI	ATCGAT	1 cut(s)	1300
BtsCI	GGATG	6 cut(s)	451, 517, 1006, 1087, 1123, 1546
BtsIMutI	CAGTG	2 cut(s)	1240, 1611
Cac8I	GCNNGC	6 cut(s)	819, 1182, 1696, 1757, 1761, 1772
CfoI	GCGC	2 cut(s)	94, 1946
Cfr13I	GGNCC	4 cut(s)	323, 1470, 1665, 1839
Cfr9I	CCCGGG	1 cut(s)	360
ClaI	ATCGAT	1 cut(s)	1300
Csp6I	GTAC	4 cut(s)	242, 1318, 1491, 1852
CviAII	CATG	2 cut(s)	1435, 1695
CviQI	GTAC	4 cut(s)	242, 1318, 1491, 1852
DpnI	GATC	8 cut(s)	636, 666, 879, 1025, 1136, 1198, 1545, 1660
DpnII	GATC	8 cut(s)	634, 664, 877, 1023, 1134, 1196, 1543, 1658
DraI	TTTAAA	1 cut(s)	829
DrdI	GACNNNNNNGTC	1 cut(s)	330
DseDI	GACNNNNNNGTC	1 cut(s)	330
EaeI	YGGCCR	3 cut(s)	259, 904, 1960
Eam1104I	CTCTTC	2 cut(s)	1590, 1745
EarI	CTCTTC	2 cut(s)	1590, 1745
Eco130I	CCWWGG	2 cut(s)	327, 1637
Eco31I	GGTCTC	2 cut(s)	350, 1998
Eco47I	GGWCC	3 cut(s)	323, 1470, 1839
Eco88I	CYCGRG	2 cut(s)	360, 1130
EcoRII	CCWGG	2 cut(s)	799, 1584
EcoT14I	CCWWGG	2 cut(s)	327, 1637
EcoT22I	ATGCAT	1 cut(s)	1700
ErhI	CCWWGG	2 cut(s)	327, 1637
FaeI	CATG	2 cut(s)	1438, 1698
FalI	AAGNNNNNCTT	2 cut(s)	1880, 1912
FaqI	GGGAC	1 cut(s)	631
FatI	CATG	2 cut(s)	1434, 1694
FauNDI	CATATG	1 cut(s)	1557
FbaI	TGATCA	1 cut(s)	664
Fnu4HI	GCNGC	5 cut(s)	627, 650, 1618, 1893, 1986
FokI	GGATG	6 cut(s)	458, 524, 1013, 1094, 1110, 1553
Fsp4HI	GCNGC	5 cut(s)	627, 650, 1618, 1893, 1986
FspBI	CTAG	4 cut(s)	279, 474, 1721, 1989
FspI	TGCGCA	1 cut(s)	1945
GlaI	GCGC	2 cut(s)	93, 1945
GluI	GCNGC	5 cut(s)	627, 650, 1618, 1893, 1986
GsuI	CTGGAG	2 cut(s)	1949, 1960
HaeIII	GGCC	6 cut(s)	261, 906, 1666, 1774, 1895, 1962
HapII	CCGG	3 cut(s)	361, 1848, 1963
HhaI	GCGC	2 cut(s)	94, 1946
Hin1II	CATG	2 cut(s)	1438, 1698
Hin6I	GCGC	2 cut(s)	92, 1944
HinP1I	GCGC	2 cut(s)	92, 1944
HindIII	AAGCTT	1 cut(s)	564
HpaII	CCGG	3 cut(s)	361, 1848, 1963
HphI	GGTGA	3 cut(s)	376, 902, 986
Hpy166II	GTNNAC	2 cut(s)	1686, 1839
Hpy188I	TCNGA	8 cut(s)	528, 535, 550, 639, 836, 1008, 1256, 1998
Hpy8I	GTNNAC	2 cut(s)	1686, 1839
Hpy99I	CGWCG	1 cut(s)	1107
HpyAV	CCTTC	5 cut(s)	553, 716, 1074, 1391, 1882
HpyCH4III	ACNGT	5 cut(s)	471, 784, 841, 1103, 1121
HpyCH4IV	ACGT	2 cut(s)	679, 1835
HpyCH4V	TGCA	9 cut(s)	147, 629, 760, 766, 821, 914, 1030, 1698, 1985
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1730, 1950, 1959
HpySE526I	ACGT	2 cut(s)	679, 1835
Hsp92II	CATG	2 cut(s)	1438, 1698
HspAI	GCGC	2 cut(s)	92, 1944
KpnI	GGTACC	2 cut(s)	245, 1855
Ksp22I	TGATCA	1 cut(s)	664
Kzo9I	GATC	8 cut(s)	634, 664, 877, 1023, 1134, 1196, 1543, 1658
LguI	GCTCTTC	1 cut(s)	1745
LmnI	GCTCC	4 cut(s)	541, 1091, 1172, 1979
Lsp1109I	GCAGC	4 cut(s)	613, 661, 1629, 1997
LweI	GCATC	5 cut(s)	156, 804, 1167, 1707, 1857
MaeI	CTAG	4 cut(s)	279, 474, 1721, 1989
MaeII	ACGT	2 cut(s)	679, 1835
MaeIII	GTNAC	2 cut(s)	974, 1075
MalI	GATC	8 cut(s)	636, 666, 879, 1025, 1136, 1198, 1545, 1660
MboI	GATC	8 cut(s)	634, 664, 877, 1023, 1134, 1196, 1543, 1658
MboII	GAAGA	4 cut(s)	878, 1607, 1762, 1925
MfeI	CAATTG	2 cut(s)	247, 761
MflI	RGATCY	4 cut(s)	877, 1134, 1196, 1658
MhlI	GDGCHC	2 cut(s)	1169, 1976
MlsI	TGGCCA	1 cut(s)	261
MluCI	AATT	9 cut(s)	130, 151, 247, 658, 761, 1204, 1362, 1519, 1802
MluNI	TGGCCA	1 cut(s)	261
MlyI	GAGTC	2 cut(s)	616, 1224
Mox20I	TGGCCA	1 cut(s)	261
Mph1103I	ATGCAT	1 cut(s)	1700
MroXI	GAANNNNTTC	1 cut(s)	1362
MscI	TGGCCA	1 cut(s)	261
MseI	TTAA	8 cut(s)	99, 408, 828, 1040, 1287, 1344, 1376, 1566
MslI	CAYNNNNRTG	4 cut(s)	1653, 1675, 1693, 1703
Msp20I	TGGCCA	1 cut(s)	261
MspA1I	CMGCKG	1 cut(s)	1770
MspCI	CTTAAG	1 cut(s)	1565
MspI	CCGG	3 cut(s)	361, 1848, 1963
MspR9I	CCNGG	5 cut(s)	361, 362, 801, 1586, 1849
MunI	CAATTG	2 cut(s)	247, 761
MvaI	CCWGG	2 cut(s)	801, 1586
MvnI	CGCG	1 cut(s)	92
MwoI	GCNNNNNNNGC	3 cut(s)	1730, 1950, 1959
NciI	CCSGG	3 cut(s)	361, 362, 1849
NdeI	CATATG	1 cut(s)	1557
NdeII	GATC	8 cut(s)	634, 664, 877, 1023, 1134, 1196, 1543, 1658
NlaIII	CATG	2 cut(s)	1438, 1698
NlaIV	GGNNCC	6 cut(s)	243, 325, 879, 1087, 1198, 1853
NmeAIII	GCCGAG	2 cut(s)	932, 1133
NmuCI	GTSAC	2 cut(s)	974, 1075
NsbI	TGCGCA	1 cut(s)	1945
NsiI	ATGCAT	1 cut(s)	1700
NspI	RCATGY	1 cut(s)	1698
NspV	TTCGAA	1 cut(s)	67
OliI	CACNNNNGTG	1 cut(s)	1675
PaeI	GCATGC	1 cut(s)	1698
PaeR7I	CTCGAG	1 cut(s)	1130
PasI	CCCWGGG	1 cut(s)	800
PciSI	GCTCTTC	1 cut(s)	1745
PdmI	GAANNNNTTC	1 cut(s)	1362
PfeI	GAWTC	8 cut(s)	51, 584, 893, 923, 1387, 1404, 1879, 1999
PflMI	CCANNNNNTGG	1 cut(s)	887
PkrI	GCNGC	5 cut(s)	628, 651, 1619, 1894, 1987
PleI	GAGTC	2 cut(s)	615, 1224
PpsI	GAGTC	2 cut(s)	615, 1224
Ppu21I	YACGTR	1 cut(s)	680
PshBI	ATTAAT	2 cut(s)	408, 1287
Psp6I	CCWGG	2 cut(s)	799, 1584
PspGI	CCWGG	2 cut(s)	799, 1584
PspN4I	GGNNCC	6 cut(s)	243, 325, 879, 1087, 1198, 1853
PspPI	GGNCC	4 cut(s)	323, 1470, 1665, 1839
PsuI	RGATCY	4 cut(s)	877, 1134, 1196, 1658
RsaI	GTAC	4 cut(s)	243, 1319, 1492, 1853
RsaNI	GTAC	4 cut(s)	242, 1318, 1491, 1852
RseI	CAYNNNNRTG	4 cut(s)	1653, 1675, 1693, 1703
SapI	GCTCTTC	1 cut(s)	1745
SaqAI	TTAA	8 cut(s)	99, 408, 828, 1040, 1287, 1344, 1376, 1566
SatI	GCNGC	5 cut(s)	627, 650, 1618, 1893, 1986
Sau3AI	GATC	8 cut(s)	634, 664, 877, 1023, 1134, 1196, 1543, 1658
Sau96I	GGNCC	4 cut(s)	323, 1470, 1665, 1839
ScaI	AGTACT	1 cut(s)	1319
SchI	GAGTC	2 cut(s)	616, 1224
ScrFI	CCNGG	5 cut(s)	361, 362, 801, 1586, 1849
SduI	GDGCHC	2 cut(s)	1169, 1976
SfaNI	GCATC	5 cut(s)	156, 804, 1167, 1707, 1857
SfcI	CTRYAG	2 cut(s)	793, 1323
Sfr274I	CTCGAG	1 cut(s)	1130
SfuI	TTCGAA	1 cut(s)	67
SinI	GGWCC	3 cut(s)	323, 1470, 1839
SlaI	CTCGAG	1 cut(s)	1130
SmaI	CCCGGG	1 cut(s)	362
SmiMI	CAYNNNNRTG	4 cut(s)	1653, 1675, 1693, 1703
SmlI	CTYRAG	2 cut(s)	1130, 1565
SmoI	CTYRAG	2 cut(s)	1130, 1565
SphI	GCATGC	1 cut(s)	1698
Sse9I	AATT	9 cut(s)	130, 151, 247, 658, 761, 1204, 1362, 1519, 1802
SsiI	CCGC	2 cut(s)	1768, 1892
SspI	AATATT	2 cut(s)	1262, 1781
SspMI	CTAG	4 cut(s)	279, 474, 1721, 1989
StyD4I	CCNGG	5 cut(s)	359, 360, 799, 1584, 1847
StyI	CCWWGG	2 cut(s)	327, 1637
TaaI	ACNGT	5 cut(s)	471, 784, 841, 1103, 1121
TaiI	ACGT	2 cut(s)	682, 1838
TaqI	TCGA	7 cut(s)	67, 344, 849, 1105, 1131, 1300, 1822
TasI	AATT	9 cut(s)	130, 151, 247, 658, 761, 1204, 1362, 1519, 1802
TatI	WGTACW	1 cut(s)	1317
TauI	GCSGC	1 cut(s)	1895
TfiI	GAWTC	8 cut(s)	51, 584, 893, 923, 1387, 1404, 1879, 1999
Tru1I	TTAA	8 cut(s)	99, 408, 828, 1040, 1287, 1344, 1376, 1566
Tru9I	TTAA	8 cut(s)	99, 408, 828, 1040, 1287, 1344, 1376, 1566
TscAI	CASTG	2 cut(s)	1240, 1618
TseFI	GTSAC	2 cut(s)	974, 1075
TseI	GCWGC	4 cut(s)	626, 649, 1617, 1985
Tsp45I	GTSAC	2 cut(s)	974, 1075
TspDTI	ATGAA	7 cut(s)	50, 507, 528, 740, 1292, 1470, 1608
TspGWI	ACGGA	3 cut(s)	681, 732, 1094
TspMI	CCCGGG	1 cut(s)	360
TspRI	CASTG	2 cut(s)	1240, 1618
Van91I	CCANNNNNTGG	1 cut(s)	887
Vha464I	CTTAAG	1 cut(s)	1565
VpaK11BI	GGWCC	3 cut(s)	323, 1470, 1839
VspI	ATTAAT	2 cut(s)	408, 1287
XapI	RAATTY	5 cut(s)	130, 1204, 1362, 1519, 1802
XceI	RCATGY	1 cut(s)	1698
XhoI	CTCGAG	1 cut(s)	1130
XmaI	CCCGGG	1 cut(s)	360
XmnI	GAANNNNTTC	1 cut(s)	1362
XspI	CTAG	4 cut(s)	279, 474, 1721, 1989
ZrmI	AGTACT	1 cut(s)	1319
Zsp2I	ATGCAT	1 cut(s)	1700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.