Basic Information
Type: gene
Biological Identity
arabidopsis_thaliana
Physical Location & Seq
Reverse (-)
2910411 .. 2911354
AT3G09455.1
Length: 108 bp
ATGTTTGACGATCAAGATCTGGGATTCTTTGCCAATTTCCTGGGAATCTTCATTTTCATACTGGTGATTGCCTACCATTTCGTCATGGCTGACCCTAAATTCGAATAG
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
4.22
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Ost4 |
PF10215 |
1 - 33 |
8.7e-15 |
Oligosaccaryltransferase |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0019145)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AcsI |
RAATTY |
1 cut(s)
|
98 |
| AjnI |
CCWGG |
1 cut(s)
|
39 |
| ApoI |
RAATTY |
1 cut(s)
|
98 |
| ArsI |
GACNNNNNNTTYG |
1 cut(s)
|
83 |
| AsuHPI |
GGTGA |
1 cut(s)
|
76 |
| AsuII |
TTCGAA |
1 cut(s)
|
102 |
| BciT130I |
CCWGG |
1 cut(s)
|
41 |
| BglII |
AGATCT |
1 cut(s)
|
16 |
| Bme1390I |
CCNGG |
1 cut(s)
|
41 |
| BmrFI |
CCNGG |
1 cut(s)
|
41 |
| Bpu14I |
TTCGAA |
1 cut(s)
|
102 |
| BsaBI |
GATNNNNATC |
1 cut(s)
|
15 |
| BsaJI |
CCNNGG |
1 cut(s)
|
40 |
| Bse1I |
ACTGG |
1 cut(s)
|
66 |
| Bse8I |
GATNNNNATC |
1 cut(s)
|
15 |
| BseBI |
CCWGG |
1 cut(s)
|
41 |
| BseDI |
CCNNGG |
1 cut(s)
|
40 |
| BseJI |
GATNNNNATC |
1 cut(s)
|
15 |
| BseNI |
ACTGG |
1 cut(s)
|
66 |
| Bsp119I |
TTCGAA |
1 cut(s)
|
102 |
| Bsp143I |
GATC |
2 cut(s)
|
10, 16 |
| BspT104I |
TTCGAA |
1 cut(s)
|
102 |
| BsrI |
ACTGG |
1 cut(s)
|
66 |
| BssECI |
CCNNGG |
1 cut(s)
|
40 |
| BssMI |
GATC |
2 cut(s)
|
10, 16 |
| Bst2UI |
CCWGG |
1 cut(s)
|
41 |
| BstBI |
TTCGAA |
1 cut(s)
|
102 |
| BstKTI |
GATC |
2 cut(s)
|
13, 19 |
| BstMBI |
GATC |
2 cut(s)
|
10, 16 |
| BstNI |
CCWGG |
1 cut(s)
|
41 |
| BstSCI |
CCNGG |
1 cut(s)
|
39 |
| BstX2I |
RGATCY |
1 cut(s)
|
16 |
| BstXI |
CCANNNNNNTGG |
1 cut(s)
|
40 |
| BstYI |
RGATCY |
1 cut(s)
|
16 |
| CviAII |
CATG |
1 cut(s)
|
85 |
| CviJI |
RGCY |
1 cut(s)
|
89 |
| CviKI_1 |
RGCY |
1 cut(s)
|
89 |
| DpnI |
GATC |
2 cut(s)
|
12, 18 |
| DpnII |
GATC |
2 cut(s)
|
10, 16 |
| EcoRII |
CCWGG |
1 cut(s)
|
39 |
| FaeI |
CATG |
1 cut(s)
|
88 |
| FaiI |
YATR |
2 cut(s)
|
59, 86 |
| FatI |
CATG |
1 cut(s)
|
84 |
| Hin1II |
CATG |
1 cut(s)
|
88 |
| HinfI |
GANTC |
2 cut(s)
|
24, 45 |
| HphI |
GGTGA |
1 cut(s)
|
76 |
| Hpy188III |
TCNNGA |
1 cut(s)
|
14 |
| Hsp92II |
CATG |
1 cut(s)
|
88 |
| Kzo9I |
GATC |
2 cut(s)
|
10, 16 |
| LpnPI |
CCDG |
4 cut(s)
|
5, 26, 47, 53 |
| MalI |
GATC |
2 cut(s)
|
12, 18 |
| MboI |
GATC |
2 cut(s)
|
10, 16 |
| MboII |
GAAGA |
1 cut(s)
|
40 |
| MflI |
RGATCY |
1 cut(s)
|
16 |
| MluCI |
AATT |
2 cut(s)
|
34, 98 |
| MslI |
CAYNNNNRTG |
1 cut(s)
|
62 |
| MspR9I |
CCNGG |
1 cut(s)
|
41 |
| MvaI |
CCWGG |
1 cut(s)
|
41 |
| NdeII |
GATC |
2 cut(s)
|
10, 16 |
| NlaIII |
CATG |
1 cut(s)
|
88 |
| NspV |
TTCGAA |
1 cut(s)
|
102 |
| PfeI |
GAWTC |
2 cut(s)
|
24, 45 |
| Psp6I |
CCWGG |
1 cut(s)
|
39 |
| PspGI |
CCWGG |
1 cut(s)
|
39 |
| PsuI |
RGATCY |
1 cut(s)
|
16 |
| RseI |
CAYNNNNRTG |
1 cut(s)
|
62 |
| Sau3AI |
GATC |
2 cut(s)
|
10, 16 |
| ScrFI |
CCNGG |
1 cut(s)
|
41 |
| SfuI |
TTCGAA |
1 cut(s)
|
102 |
| SgeI |
CNNG |
6 cut(s)
|
26, 32, 52, 53, 74, 97 |
| SmiMI |
CAYNNNNRTG |
1 cut(s)
|
62 |
| Sse9I |
AATT |
2 cut(s)
|
34, 98 |
| StyD4I |
CCNGG |
1 cut(s)
|
39 |
| TaqI |
TCGA |
1 cut(s)
|
102 |
| TasI |
AATT |
2 cut(s)
|
34, 98 |
| TfiI |
GAWTC |
2 cut(s)
|
24, 45 |
| TspDTI |
ATGAA |
2 cut(s)
|
40, 46 |
| XapI |
RAATTY |
1 cut(s)
|
98 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.