Prupe.6G252200_v2.0.a1

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
24654738 .. 24655968
1231 bp
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UTR
Exon/CDS
Intron
Prupe.6G252200.1

Sequence Viewer

Length: 114 bp
ATGATGGATGATCAGGACCTGGGCTTCTTTGCCAATTTTCTTGGCATCTTCATATTTGTATTGGTAATAGCGTATCATTATGTGATGGCCGACCCAAAATACGAAGGCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

38

Amino Acids

4.31

Weight (kDa)

4.05

Isoelectric Point (pI)

19.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09455 AT3G09455 AT5G02502
malus_domestica MD04G1125200.v1.1
prunus_persica Prupe.6G252200_v2.0.a1
rosa_laevigata RLG00000024535
rosa_samantha Rh3BG153800 Rh3DG154900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 87
AjnI CCWGG 1 cut(s) 18
AlwNI CAGNNNCTG 1 cut(s) 19
AoxI GGCC 1 cut(s) 87
AspS9I GGNCC 1 cut(s) 16
AvaII GGWCC 1 cut(s) 16
BccI CCATC 1 cut(s) 79
BciT130I CCWGG 1 cut(s) 20
BclI TGATCA 1 cut(s) 10
Bme1390I CCNGG 1 cut(s) 20
Bme18I GGWCC 1 cut(s) 16
BmgT120I GGNCC 1 cut(s) 16
BmrFI CCNGG 1 cut(s) 20
BmsI GCATC 1 cut(s) 54
BsaJI CCNNGG 1 cut(s) 19
BseBI CCWGG 1 cut(s) 20
BseDI CCNNGG 1 cut(s) 19
BseGI GGATG 1 cut(s) 13
BshFI GGCC 1 cut(s) 89
BsnI GGCC 1 cut(s) 89
Bsp143I GATC 1 cut(s) 10
BspANI GGCC 1 cut(s) 89
BssECI CCNNGG 1 cut(s) 19
BssMI GATC 1 cut(s) 10
Bst2UI CCWGG 1 cut(s) 20
BstF5I GGATG 1 cut(s) 13
BstKTI GATC 1 cut(s) 13
BstMBI GATC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 20
BstSCI CCNGG 1 cut(s) 18
BsuRI GGCC 1 cut(s) 89
BtsCI GGATG 1 cut(s) 13
CaiI CAGNNNCTG 1 cut(s) 19
Cfr13I GGNCC 1 cut(s) 16
CviJI RGCY 2 cut(s) 24, 89
CviKI_1 RGCY 2 cut(s) 24, 89
DpnI GATC 1 cut(s) 12
DpnII GATC 1 cut(s) 10
EaeI YGGCCR 1 cut(s) 87
Eco47I GGWCC 1 cut(s) 16
EcoO109I RGGNCCY 1 cut(s) 16
EcoRII CCWGG 1 cut(s) 18
FaiI YATR 2 cut(s) 53, 81
FbaI TGATCA 1 cut(s) 10
FokI GGATG 1 cut(s) 20
HaeIII GGCC 1 cut(s) 89
Hpy188III TCNNGA 1 cut(s) 14
HpyAV CCTTC 1 cut(s) 98
Ksp22I TGATCA 1 cut(s) 10
Kzo9I GATC 1 cut(s) 10
LpnPI CCDG 2 cut(s) 5, 32
LweI GCATC 1 cut(s) 54
MalI GATC 1 cut(s) 12
MboI GATC 1 cut(s) 10
MboII GAAGA 1 cut(s) 40
MluCI AATT 1 cut(s) 34
MspR9I CCNGG 1 cut(s) 20
MvaI CCWGG 1 cut(s) 20
NdeII GATC 1 cut(s) 10
PpuMI RGGWCCY 1 cut(s) 16
Psp5II RGGWCCY 1 cut(s) 16
Psp6I CCWGG 1 cut(s) 18
PspGI CCWGG 1 cut(s) 18
PspPI GGNCC 1 cut(s) 16
PspPPI RGGWCCY 1 cut(s) 16
PstNI CAGNNNCTG 1 cut(s) 19
Sau3AI GATC 1 cut(s) 10
Sau96I GGNCC 1 cut(s) 16
ScrFI CCNGG 1 cut(s) 20
SetI ASST 1 cut(s) 21
SfaNI GCATC 1 cut(s) 54
SgeI CNNG 4 cut(s) 26, 31, 32, 53
SinI GGWCC 1 cut(s) 16
Sse9I AATT 1 cut(s) 34
StyD4I CCNGG 1 cut(s) 18
TasI AATT 1 cut(s) 34
TspDTI ATGAA 1 cut(s) 40
VpaK11BI GGWCC 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.