AT3G09940

monodehydroascorbate reductase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
3056375 .. 3059244
2870 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G09940.1

Sequence Viewer

Length: 1326 bp
ATGGCGGAAGAGAAAAGCTACAAGTACGTGATCATTGGAGGTGGTGTAGCCGGCGGTTACGCGGCGAGAGAGTTTAGTAATCAGGGCCTGAAGCCTGGTGAACTCGCAATCATTTCCAAGGAACCAGTGCCTCCTTTTGAGCGTCCTGAACTAACCAAGGTATATATTGACCTCGAAGTCAATCCGACCCTTGCAAATATCTATGTTTGTGCTGGAACTGGAGAAGCGAAGCAGTACCCTAACTGGTACAAAGAGAAAGGGATTGATCTAATTGTGGGCACAGAGATAGTCAAAGCAGATCTTGCTTCAAAGACACTTGTTAGTGATGATGGCAAAATTTACAAGTACCAAACTTTGCTAATTGCAACCGGTTCTACTAACATAAGATTGTCAGAAATTGGCGTCCAAGAAGCAGATGTTAAGAATATATTCTACCTAAGAGAAATCGAGGATAGTGATGAGCTTGCCTTGGCTATGGAACTATATGTGCAAAGGGGAAAGGCCGTCATCATTGGCGGCGGTTTCTTAGGGCTTGAGATAAGTTCTGCTCTAAGGGCTAATAATCATGAAGTGACCATGGTTTTTCCAGAACCTTGGCTTGTACACCGGTTTTTCACCGCTGAGATAGCTTCATTCTATGAGAGTTACTATGCCAACAAGGGAATCAAAATCATCAAGGGAACTGTAGCAACTGGATTTAGCACCAACTCAGATGGAGAGGTCACTGAGGTGAAACTAGAGGATGGAAGAACCCTAGAAGCTAACATAGTTGTCGCTGGTGTCGGTGCTAGACCGGCCACCTCACTCTTCAAAGGCCAACTTGAAGAGGAGAAGGGTGGAATAAAGACTGATGGGTTCTTCAAAACAAGTGTGCCTGATGTATACGCACTTGGAGATGTAGCCACATTCCCAATGAAAATGTATGGCGGGACGAGGCGTGTTGAACACGCCGACAATGCTCGCAAATCTGCTGCACAAGCAGTCAAAGCAATCAAAGCGGGTGAAGAAGGGAAAACGATCCCAGATTACGATTATCTTCCCTATTTCTACTCTCGATTTTTCAAACTATCGTGGGAATTCTATGGGGAAAACGTTGGAGAATCTGTACTGTTTGGAGATAATGACCCGAAATCTCCAAAGCCAAAGTTTGGGACGTATTGGGTTAAAGATGGGAAAGTAGTAGGAGTGTTCCTAGAAGGAGGTACTCAAGAGGAACACAAGGCTATTGCTAAAGTGGCACGAGCACAACCTTCCGTTGAGAGTCTTGACGTGTTATCCGAGGAAGGCCTTTCTTTCGCCACCAAGTTCTATAGCACCTCTCTTTGA

Protein Analysis

441

Amino Acids

48.36

Weight (kDa)

5.2

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 7 - 324 9.6e-56 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 167 - 249 3.4e-15 Pyridine nucleotide-disulphide oxidoreductase
MDHAR3-like_C PF21791 346 - 433 7.1e-41 Monodehydroascorbate reductase 3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013840)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 176
AccB7I CCANNNNNTGG 1 cut(s) 1148
AccI GTMKAC 1 cut(s) 882
AccII CGCG 1 cut(s) 62
AciI CCGC 8 cut(s) 5, 54, 62, 516, 519, 618, 927, 998
AclI AACGTT 1 cut(s) 1092
AclWI GGATC 1 cut(s) 1012
AcoI YGGCCR 1 cut(s) 795
AcsI RAATTY 2 cut(s) 336, 1076
AcuI CTGAAG 1 cut(s) 110
AcyI GRCGYC 1 cut(s) 402
AfaI GTAC 7 cut(s) 26, 236, 248, 347, 603, 1107, 1204
AfiI CCNNNNNNNGG 1 cut(s) 1148
AflIII ACRYGT 1 cut(s) 1269
AgeI ACCGGT 2 cut(s) 368, 606
AgsI TTSAA 6 cut(s) 309, 811, 824, 862, 944, 1063
AjiI CACGTC 1 cut(s) 1270
AjnI CCWGG 1 cut(s) 94
AleI CACNNNNGTG 1 cut(s) 728
AluBI AGCT 4 cut(s) 18, 463, 629, 761
AluI AGCT 4 cut(s) 18, 463, 629, 761
Alw21I GWGCWC 1 cut(s) 1246
AlwI GGATC 1 cut(s) 1012
AlwNI CAGNNNCTG 1 cut(s) 88
AoxI GGCC 5 cut(s) 85, 501, 795, 814, 1285
ApeKI GCWGC 1 cut(s) 971
ApoI RAATTY 2 cut(s) 336, 1076
AsiGI ACCGGT 2 cut(s) 368, 606
Asp700I GAANNNNTTC 1 cut(s) 428
AspS9I GGNCC 1 cut(s) 85
AsuHPI GGTGA 4 cut(s) 110, 607, 742, 1013
BaeGI GKGCMC 1 cut(s) 281
BauI CACGAG 1 cut(s) 1239
Bbv12I GWGCWC 1 cut(s) 1246
BbvI GCAGC 1 cut(s) 958
BccI CCATC 5 cut(s) 323, 707, 737, 845, 1163
BceAI ACGGC 1 cut(s) 488
BciT130I CCWGG 1 cut(s) 96
BclI TGATCA 1 cut(s) 30
BfaI CTAG 4 cut(s) 737, 755, 789, 1193
BfmI CTRYAG 2 cut(s) 684, 1309
BglII AGATCT 1 cut(s) 298
BisI GCNGC 3 cut(s) 63, 517, 972
BlsI GCNGC 3 cut(s) 64, 518, 973
Bme1390I CCNGG 1 cut(s) 96
BmgBI CACGTC 1 cut(s) 1270
BmgT120I GGNCC 1 cut(s) 85
BmiI GGNNCC 1 cut(s) 123
BmrFI CCNGG 1 cut(s) 96
BpmI CTGGAG 1 cut(s) 240
BpuEI CTTGAG 2 cut(s) 554, 1191
BsaAI YACGTR 1 cut(s) 28
BsaHI GRCGYC 1 cut(s) 402
BsaJI CCNNGG 6 cut(s) 117, 156, 468, 576, 593, 1278
BsaWI WCCGGW 2 cut(s) 368, 606
BsaXI ACNNNNNCTCC 4 cut(s) 30, 60, 1089, 1119
Bsc4I CCNNNNNNNGG 1 cut(s) 1148
Bse118I RCCGGY 4 cut(s) 50, 368, 606, 793
Bse1I ACTGG 4 cut(s) 125, 223, 248, 697
BseBI CCWGG 1 cut(s) 96
BseDI CCNNGG 6 cut(s) 117, 156, 468, 576, 593, 1278
BseGI GGATG 1 cut(s) 748
BseLI CCNNNNNNNGG 1 cut(s) 1148
BseMII CTCAG 3 cut(s) 612, 717, 723
BseNI ACTGG 4 cut(s) 125, 223, 248, 697
BseRI GAGGAG 1 cut(s) 842
BseSI GKGCMC 1 cut(s) 281
BseXI GCAGC 1 cut(s) 958
BsgI GTGCAG 1 cut(s) 957
Bsh1236I CGCG 1 cut(s) 62
BshFI GGCC 5 cut(s) 87, 503, 797, 816, 1287
BshTI ACCGGT 2 cut(s) 368, 606
BsiHKAI GWGCWC 1 cut(s) 1246
BsiSI CCGG 4 cut(s) 51, 369, 607, 794
BslFI GGGAC 2 cut(s) 943, 1165
BslI CCNNNNNNNGG 1 cut(s) 1148
BsmFI GGGAC 2 cut(s) 943, 1165
BsnI GGCC 5 cut(s) 87, 503, 797, 816, 1287
Bsp1286I GDGCHC 2 cut(s) 281, 1246
Bsp1407I TGTACA 1 cut(s) 601
Bsp143I GATC 4 cut(s) 30, 265, 298, 1017
Bsp19I CCATGG 1 cut(s) 576
BspACI CCGC 8 cut(s) 5, 54, 62, 516, 519, 618, 927, 998
BspANI GGCC 5 cut(s) 87, 503, 797, 816, 1287
BspCNI CTCAG 3 cut(s) 613, 718, 722
BspFNI CGCG 1 cut(s) 62
BspHI TCATGA 1 cut(s) 565
BspLI GGNNCC 1 cut(s) 123
BspPI GGATC 1 cut(s) 1012
BsrFI RCCGGY 4 cut(s) 50, 368, 606, 793
BsrGI TGTACA 1 cut(s) 601
BsrI ACTGG 4 cut(s) 125, 223, 248, 697
BssAI RCCGGY 4 cut(s) 50, 368, 606, 793
BssECI CCNNGG 6 cut(s) 117, 156, 468, 576, 593, 1278
BssMI GATC 4 cut(s) 30, 265, 298, 1017
BssNAI GTATAC 1 cut(s) 883
BssNI GRCGYC 1 cut(s) 402
BssSI CACGAG 1 cut(s) 1239
BssT1I CCWWGG 5 cut(s) 117, 156, 468, 576, 593
Bst1107I GTATAC 1 cut(s) 883
Bst2BI CACGAG 1 cut(s) 1239
Bst2UI CCWGG 1 cut(s) 96
Bst4CI ACNGT 2 cut(s) 685, 1110
Bst6I CTCTTC 3 cut(s) 3, 812, 819
BstACI GRCGYC 1 cut(s) 402
BstAPI GCANNNNNTGC 1 cut(s) 302
BstAUI TGTACA 1 cut(s) 601
BstBAI YACGTR 1 cut(s) 28
BstC8I GCNNGC 3 cut(s) 52, 465, 961
BstDEI CTNAG 6 cut(s) 437, 526, 551, 621, 709, 726
BstDSI CCRYGG 1 cut(s) 576
BstF5I GGATG 1 cut(s) 748
BstFNI CGCG 1 cut(s) 62
BstKTI GATC 4 cut(s) 33, 268, 301, 1020
BstMBI GATC 4 cut(s) 30, 265, 298, 1017
BstMWI GCNNNNNNNGC 9 cut(s) 302, 554, 626, 794, 956, 977, 986, 995, 1235
BstNI CCWGG 1 cut(s) 96
BstSCI CCNGG 1 cut(s) 94
BstSFI CTRYAG 2 cut(s) 684, 1309
BstSLI GKGCMC 1 cut(s) 281
BstUI CGCG 1 cut(s) 62
BstV1I GCAGC 1 cut(s) 958
BstX2I RGATCY 1 cut(s) 298
BstXI CCANNNNNNTGG 1 cut(s) 594
BstYI RGATCY 1 cut(s) 298
BstZ17I GTATAC 1 cut(s) 883
BsuRI GGCC 5 cut(s) 87, 503, 797, 816, 1287
BtgI CCRYGG 1 cut(s) 576
BtrI CACGTC 1 cut(s) 1270
BtsCI GGATG 1 cut(s) 748
BtsIMutI CAGTG 2 cut(s) 132, 723
Cac8I GCNNGC 3 cut(s) 52, 465, 961
CaiI CAGNNNCTG 1 cut(s) 88
CciI TCATGA 1 cut(s) 565
Cfr10I RCCGGY 4 cut(s) 50, 368, 606, 793
Cfr13I GGNCC 1 cut(s) 85
CseI GACGC 2 cut(s) 131, 391
Csp6I GTAC 7 cut(s) 25, 235, 247, 346, 602, 1106, 1203
CspAI ACCGGT 2 cut(s) 368, 606
CviAII CATG 2 cut(s) 566, 577
CviQI GTAC 7 cut(s) 25, 235, 247, 346, 602, 1106, 1203
DdeI CTNAG 6 cut(s) 437, 526, 551, 621, 709, 726
DpnI GATC 4 cut(s) 32, 267, 300, 1019
DpnII GATC 4 cut(s) 30, 265, 298, 1017
DrdI GACNNNNNNGTC 1 cut(s) 176
DseDI GACNNNNNNGTC 1 cut(s) 176
EaeI YGGCCR 1 cut(s) 795
Eam1104I CTCTTC 3 cut(s) 3, 812, 819
EarI CTCTTC 3 cut(s) 3, 812, 819
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 5 cut(s) 117, 156, 468, 576, 593
Eco147I AGGCCT 1 cut(s) 1287
Eco57I CTGAAG 1 cut(s) 110
EcoO109I RGGNCCY 1 cut(s) 85
EcoRI GAATTC 1 cut(s) 1076
EcoRII CCWGG 1 cut(s) 94
EcoT14I CCWWGG 5 cut(s) 117, 156, 468, 576, 593
ErhI CCWWGG 5 cut(s) 117, 156, 468, 576, 593
FaeI CATG 2 cut(s) 569, 580
FalI AAGNNNNNCTT 4 cut(s) 285, 317, 804, 836
FaqI GGGAC 2 cut(s) 943, 1165
FatI CATG 2 cut(s) 565, 576
FauI CCCGC 2 cut(s) 920, 991
FbaI TGATCA 1 cut(s) 30
FblI GTMKAC 1 cut(s) 882
Fnu4HI GCNGC 3 cut(s) 63, 517, 972
FokI GGATG 1 cut(s) 755
Fsp4HI GCNGC 3 cut(s) 63, 517, 972
FspBI CTAG 4 cut(s) 737, 755, 789, 1193
GluI GCNGC 3 cut(s) 63, 517, 972
GsuI CTGGAG 1 cut(s) 240
HaeIII GGCC 5 cut(s) 87, 503, 797, 816, 1287
HapII CCGG 4 cut(s) 51, 369, 607, 794
HgaI GACGC 2 cut(s) 131, 391
Hin1I GRCGYC 1 cut(s) 402
Hin1II CATG 2 cut(s) 569, 580
HinfI GANTC 3 cut(s) 663, 1100, 1261
HpaII CCGG 4 cut(s) 51, 369, 607, 794
HphI GGTGA 4 cut(s) 110, 607, 742, 1013
Hpy166II GTNNAC 3 cut(s) 101, 604, 883
Hpy188I TCNGA 4 cut(s) 186, 394, 712, 1279
Hpy188III TCNNGA 6 cut(s) 146, 566, 587, 1053, 1208, 1265
Hpy8I GTNNAC 3 cut(s) 101, 604, 883
HpyAV CCTTC 5 cut(s) 826, 1001, 1190, 1260, 1277
HpyCH4III ACNGT 2 cut(s) 685, 1110
HpyCH4IV ACGT 4 cut(s) 27, 1092, 1154, 1269
HpyCH4V TGCA 4 cut(s) 194, 365, 490, 974
HpyF10VI GCNNNNNNNGC 9 cut(s) 302, 554, 626, 794, 956, 977, 986, 995, 1235
HpyF3I CTNAG 6 cut(s) 437, 526, 551, 621, 709, 726
HpySE526I ACGT 4 cut(s) 27, 1092, 1154, 1269
Hsp92I GRCGYC 1 cut(s) 402
Hsp92II CATG 2 cut(s) 569, 580
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
Ksp22I TGATCA 1 cut(s) 30
Kzo9I GATC 4 cut(s) 30, 265, 298, 1017
Lsp1109I GCAGC 1 cut(s) 958
MaeI CTAG 4 cut(s) 737, 755, 789, 1193
MaeII ACGT 4 cut(s) 27, 1092, 1154, 1269
MaeIII GTNAC 4 cut(s) 56, 571, 644, 721
MalI GATC 4 cut(s) 32, 267, 300, 1019
MboI GATC 4 cut(s) 30, 265, 298, 1017
MboII GAAGA 7 cut(s) 20, 759, 799, 836, 850, 1016, 1028
MflI RGATCY 1 cut(s) 298
MhlI GDGCHC 2 cut(s) 281, 1246
MluCI AATT 5 cut(s) 270, 336, 360, 396, 1076
MlyI GAGTC 1 cut(s) 1270
MmeI TCCRAC 2 cut(s) 209, 1075
MroNI GCCGGC 1 cut(s) 50
MroXI GAANNNNTTC 1 cut(s) 428
MseI TTAA 2 cut(s) 420, 1164
MslI CAYNNNNRTG 1 cut(s) 728
MspA1I CMGCKG 1 cut(s) 620
MspI CCGG 4 cut(s) 51, 369, 607, 794
MspR9I CCNGG 1 cut(s) 96
MvaI CCWGG 1 cut(s) 96
MvnI CGCG 1 cut(s) 62
MwoI GCNNNNNNNGC 9 cut(s) 302, 554, 626, 794, 956, 977, 986, 995, 1235
NaeI GCCGGC 1 cut(s) 52
NcoI CCATGG 1 cut(s) 576
NdeII GATC 4 cut(s) 30, 265, 298, 1017
NgoMIV GCCGGC 1 cut(s) 50
NlaIII CATG 2 cut(s) 569, 580
NlaIV GGNNCC 1 cut(s) 123
NmuCI GTSAC 2 cut(s) 571, 721
OliI CACNNNNGTG 1 cut(s) 728
PagI TCATGA 1 cut(s) 565
PceI AGGCCT 1 cut(s) 1287
PcsI WCGNNNNNNNCGW 1 cut(s) 1275
PdiI GCCGGC 1 cut(s) 52
PdmI GAANNNNTTC 1 cut(s) 428
PfeI GAWTC 2 cut(s) 663, 1100
PflMI CCANNNNNTGG 1 cut(s) 1148
PinAI ACCGGT 2 cut(s) 368, 606
PkrI GCNGC 3 cut(s) 64, 518, 973
PleI GAGTC 1 cut(s) 1269
PpsI GAGTC 1 cut(s) 1269
Ppu21I YACGTR 1 cut(s) 28
Psp1406I AACGTT 1 cut(s) 1092
Psp6I CCWGG 1 cut(s) 94
PspGI CCWGG 1 cut(s) 94
PspN4I GGNNCC 1 cut(s) 123
PspPI GGNCC 1 cut(s) 85
PstNI CAGNNNCTG 1 cut(s) 88
PsuI RGATCY 1 cut(s) 298
RsaI GTAC 7 cut(s) 26, 236, 248, 347, 603, 1107, 1204
RsaNI GTAC 7 cut(s) 25, 235, 247, 346, 602, 1106, 1203
RseI CAYNNNNRTG 1 cut(s) 728
SaqAI TTAA 2 cut(s) 420, 1164
SatI GCNGC 3 cut(s) 63, 517, 972
Sau3AI GATC 4 cut(s) 30, 265, 298, 1017
Sau96I GGNCC 1 cut(s) 85
SchI GAGTC 1 cut(s) 1270
ScrFI CCNGG 1 cut(s) 96
SduI GDGCHC 2 cut(s) 281, 1246
SfcI CTRYAG 2 cut(s) 684, 1309
SmiMI CAYNNNNRTG 1 cut(s) 728
SmlI CTYRAG 2 cut(s) 533, 1206
SmoI CTYRAG 2 cut(s) 533, 1206
Sse9I AATT 5 cut(s) 270, 336, 360, 396, 1076
SseBI AGGCCT 1 cut(s) 1287
SsiI CCGC 8 cut(s) 5, 54, 62, 516, 519, 618, 927, 998
SspMI CTAG 4 cut(s) 737, 755, 789, 1193
StuI AGGCCT 1 cut(s) 1287
StyD4I CCNGG 1 cut(s) 94
StyI CCWWGG 5 cut(s) 117, 156, 468, 576, 593
TaaI ACNGT 2 cut(s) 685, 1110
TaiI ACGT 4 cut(s) 30, 1095, 1157, 1272
TaqI TCGA 3 cut(s) 174, 447, 1054
TasI AATT 5 cut(s) 270, 336, 360, 396, 1076
TatI WGTACW 2 cut(s) 601, 1105
TauI GCSGC 2 cut(s) 65, 519
TfiI GAWTC 2 cut(s) 663, 1100
Tru1I TTAA 2 cut(s) 420, 1164
Tru9I TTAA 2 cut(s) 420, 1164
TscAI CASTG 2 cut(s) 132, 730
TseFI GTSAC 2 cut(s) 571, 721
TseI GCWGC 1 cut(s) 971
Tsp45I GTSAC 2 cut(s) 571, 721
TspDTI ATGAA 3 cut(s) 582, 621, 929
TspGWI ACGGA 1 cut(s) 1243
TspRI CASTG 2 cut(s) 132, 730
Van91I CCANNNNNTGG 1 cut(s) 1148
XapI RAATTY 2 cut(s) 336, 1076
XmiI GTMKAC 1 cut(s) 882
XmnI GAANNNNTTC 1 cut(s) 428
XspI CTAG 4 cut(s) 737, 755, 789, 1193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.