AT3G12270
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
3910481 .. 3913376
2896 bp
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UTR
Exon/CDS
Intron
AT3G12270.1

Sequence Viewer

Length: 1806 bp
ATGGCGGCGACAATGGTGAAGCACGAGATTCTCAACTACAGCGAGGATGAAGAAGAAAATTACTCAGACGAAGGAGATTGGGGAGACTGGAAAGCTGATGATAATGGTATAGAAGGAGGAGAGGAGGAGGAGGAGGATGATGGTGACGACTCGGAATCTGATTTTCTGTGTTTGTTTTGTGATTCTCACTTCGTTTCCTGTGATTTACTCTTCGAACACTGTCGTCTAAGCCACGGATTCGACTTTCATGGAGTTAGAAAGGAATTGAAGCTCGATTTCTACTCTTCTTTTAAGCTCATCAACTATATTCGCTCACAGGTGGCTGAGAACATGTGTTTCAGTTGGAAGATTGAAGCTGATGATTACAAAGATGTTAAGTTTCCTTGGGATGAAGAGAAGTATCTGAAGCCTTTTTGGCAGGAGGATTCACTTTTGTACTCGTTTGCAGATGATGAGGAAGATGAAGAAGTCACGTTTGACAGAGAGGAAGTGATGGAGGAATTGCAGAAGCTTGGGGATTTAAGCATTGATGTCGAGGCTTTAGGGGAAAGCTCAATGTCGAACAGTGATAAATGCAATATAAATGGAAGTAAGGATGTAACTTCGCTCTCAAACTGCAATGGCCTAAAGCAAAGTTCTGCGGATGATTTGATAGTCAATGGGAAAGATGCAGAACCAAAGGTTTGTGATGGAAGGCTAGTTAATAGGAACATCAGAAAGGTGAATGAGAACTATTTTGGATCTTATAGTTCGTTTGGCATTCACAGGGAGATGCTAAGTGATAAGGTTAGAACAGAAGCATACCGAGATGCACTTTTGAAGAATCCTACTCTCTTGAATGGCTCTGTTGTAATGGATGTTGGTTGTGGAACTGGGATATTGAGTCTTTTTGCTGCTAAAGCTGGGGCTTCAAGGGTAGTTGCAGTTGAAGCTAGTGAGAAGATGGCCAAAGTTGCAACTAAGATTGCGAAGGATAACAAAGTATTCAATGATAACGAGCATAATGGGGTACTTGAAGTTGCACACTCAATGGTAGAAGAGCTAGATAAATCGATACAGATTCAGCCTCATAGTGTTGATGTGTTAGTCAGCGAATGGATGGGATACTGCCTTTTATATGAGTCAATGCTCAGTTCTGTGCTCTATGCAAGAGATCGGTGGTTGAAACCTGGAGGTGCAATCCTCCCTGACACGGCCACTATGTTTGTTGCGGGATTTGGAAAAGGTGCAACAAGTCTTCCTTTCTGGGAAGATGTCTATGGCTTTGACATGTCTTCAATTGGGAAGGAGATACATGACGACACTACTCGACTTCCCATTGTTGACGTTATAGCGGAGCGTGATTTAGTGACACAGCCTACCCTTCTTCAGACATTTGACCTGGCTACCATGAAACCGGATGAAGTAGATTTCACAGCAACGGCAACGCTGGAGCCCACTGAGTCAGAAGCAAAAACTAGGTTGTGCCATGGTGTTGTGTTGTGGTTTGACACAGGTTTCACCAGTAGGTTCTGTAAGGAAAACCCAACCGTACTATCCACATCACCCTACACTCCCCCAACACACTGGGCTCAGACAATCTTAACTTTTCAAGAACCAATCTCAGTGGCACCGGCCTCGGTTCTGTCTGGTAATGACAGAAGAGAAGCCATCGGAACCGAAGAGTGTCCCGCCTCAAGCATTCATCTGCGTGTGAGTGTTGCACGAGCACATGAGCATCGCAGCATAGACATCTCGTTAGAGGCTACTGGGCTGAGCTCAAAGGGTCAGAAGCGTCACTGGCCGGTTCAGATATTTAATCTATGA

Protein Analysis

601

Amino Acids

67.34

Weight (kDa)

4.57

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANM3_C2H2_Zf PF21137 86 - 137 9e-10 Protein arginine N-methyltransferase 3, C2H2 zinc finger domain
PrmA PF06325 279 - 345 2.8e-09 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_31 PF13847 281 - 395 9.8e-07 Methyltransferase domain
Methyltransf_25 PF13649 284 - 392 3.4e-10 Methyltransferase domain
Methyltransf_11 PF08241 286 - 394 1.2e-09 Methyltransferase domain
PRMT_C PF22528 397 - 544 9.5e-29 Arginine methyltransferase oligomerization subdomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012516)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1609
AciI CCGC 5 cut(s) 5, 641, 1211, 1334, 1671
AclWI GGATC 1 cut(s) 748
AcoI YGGCCR 3 cut(s) 945, 1194, 1781
AcuI CTGAAG 2 cut(s) 425, 1352
AfaI GTAC 3 cut(s) 437, 1011, 1533
AfiI CCNNNNNNNGG 1 cut(s) 1192
AflIII ACRYGT 2 cut(s) 330, 1269
AjnI CCWGG 2 cut(s) 1168, 1380
Alw21I GWGCWC 3 cut(s) 1143, 1711, 1760
Alw26I GTCTC 1 cut(s) 78
AlwI GGATC 1 cut(s) 748
AoxI GGCC 5 cut(s) 622, 945, 1194, 1614, 1781
ApeKI GCWGC 2 cut(s) 893, 1722
AsuHPI GGTGA 5 cut(s) 28, 155, 733, 1492, 1536
AsuII TTCGAA 1 cut(s) 213
BalI TGGCCA 1 cut(s) 947
BanI GGYRCC 1 cut(s) 1609
BanII GRGCYC 3 cut(s) 1437, 1573, 1760
BauI CACGAG 2 cut(s) 23, 1704
BbsI GAAGAC 2 cut(s) 1229, 1266
Bbv12I GWGCWC 3 cut(s) 1143, 1711, 1760
BbvI GCAGC 2 cut(s) 880, 1734
BccI CCATC 6 cut(s) 134, 487, 683, 937, 1093, 1658
BceAI ACGGC 2 cut(s) 1209, 1437
BcgI CGANNNNNNTGC 4 cut(s) 514, 548, 1599, 1633
BciT130I CCWGG 2 cut(s) 1170, 1382
BciVI GTATCC 1 cut(s) 1097
BcoDI GTCTC 1 cut(s) 78
BfaI CTAG 4 cut(s) 698, 933, 1043, 1458
BfmI CTRYAG 1 cut(s) 37
BfuI GTATCC 1 cut(s) 1097
BglI GCCNNNNNGGC 1 cut(s) 415
BisI GCNGC 3 cut(s) 6, 894, 1723
BlpI GCTNAGC 1 cut(s) 1754
BlsI GCNGC 3 cut(s) 7, 895, 1724
Bme1390I CCNGG 2 cut(s) 1170, 1382
BmiI GGNNCC 3 cut(s) 1434, 1611, 1657
BmrFI CCNGG 2 cut(s) 1170, 1382
BmrI ACTGGG 3 cut(s) 882, 1576, 1758
BmsI GCATC 4 cut(s) 658, 762, 799, 1726
BmuI ACTGGG 3 cut(s) 882, 1576, 1758
BpiI GAAGAC 2 cut(s) 1229, 1266
BpmI CTGGAG 2 cut(s) 1191, 1451
Bpu1102I GCTNAGC 1 cut(s) 1754
Bpu14I TTCGAA 1 cut(s) 213
BpuEI CTTGAG 1 cut(s) 1660
Bsa29I ATCGAT 1 cut(s) 1052
BsaJI CCNNGG 4 cut(s) 232, 383, 1468, 1617
BsaWI WCCGGW 1 cut(s) 1396
Bsc4I CCNNNNNNNGG 1 cut(s) 1192
Bse118I RCCGGY 2 cut(s) 1612, 1783
Bse1I ACTGG 6 cut(s) 92, 877, 1503, 1571, 1753, 1784
Bse3DI GCAATG 1 cut(s) 625
BseBI CCWGG 2 cut(s) 1170, 1382
BseCI ATCGAT 1 cut(s) 1052
BseDI CCNNGG 4 cut(s) 232, 383, 1468, 1617
BseGI GGATG 8 cut(s) 52, 142, 394, 601, 649, 862, 1104, 1405
BseLI CCNNNNNNNGG 1 cut(s) 1192
BseMI GCAATG 1 cut(s) 625
BseMII CTCAG 7 cut(s) 78, 315, 1144, 1431, 1586, 1617, 1745
BseNI ACTGG 6 cut(s) 92, 877, 1503, 1571, 1753, 1784
BseRI GAGGAG 5 cut(s) 132, 137, 140, 143, 146
BseXI GCAGC 2 cut(s) 880, 1734
BseYI CCCAGC 1 cut(s) 902
BshFI GGCC 5 cut(s) 624, 947, 1196, 1616, 1783
BshNI GGYRCC 1 cut(s) 1609
BshVI ATCGAT 1 cut(s) 1052
BsiHKAI GWGCWC 3 cut(s) 1143, 1711, 1760
BsiSI CCGG 3 cut(s) 1397, 1613, 1784
BslFI GGGAC 1 cut(s) 1653
BslI CCNNNNNNNGG 1 cut(s) 1192
BsmAI GTCTC 1 cut(s) 78
BsmFI GGGAC 1 cut(s) 1653
BsmI GAATGC 2 cut(s) 759, 1680
BsnI GGCC 5 cut(s) 624, 947, 1196, 1616, 1783
Bsp119I TTCGAA 1 cut(s) 213
Bsp1286I GDGCHC 5 cut(s) 1143, 1437, 1573, 1711, 1760
Bsp143I GATC 2 cut(s) 740, 1153
Bsp1720I GCTNAGC 1 cut(s) 1754
Bsp19I CCATGG 1 cut(s) 1468
BspACI CCGC 5 cut(s) 5, 641, 1211, 1334, 1671
BspANI GGCC 5 cut(s) 624, 947, 1196, 1616, 1783
BspCNI CTCAG 7 cut(s) 77, 316, 1143, 1432, 1585, 1616, 1746
BspDI ATCGAT 1 cut(s) 1052
BspLI GGNNCC 3 cut(s) 1434, 1611, 1657
BspPI GGATC 1 cut(s) 748
BspQI GCTCTTC 1 cut(s) 1032
BspT104I TTCGAA 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 1609
BsrDI GCAATG 1 cut(s) 625
BsrFI RCCGGY 2 cut(s) 1612, 1783
BsrI ACTGG 6 cut(s) 92, 877, 1503, 1571, 1753, 1784
BssAI RCCGGY 2 cut(s) 1612, 1783
BssECI CCNNGG 4 cut(s) 232, 383, 1468, 1617
BssMI GATC 2 cut(s) 740, 1153
BssSI CACGAG 2 cut(s) 23, 1704
BssT1I CCWWGG 2 cut(s) 383, 1468
Bst2BI CACGAG 2 cut(s) 23, 1704
Bst2UI CCWGG 2 cut(s) 1170, 1382
Bst4CI ACNGT 3 cut(s) 221, 566, 1531
Bst6I CTCTTC 6 cut(s) 215, 289, 387, 1032, 1636, 1656
BstBI TTCGAA 1 cut(s) 213
BstDSI CCRYGG 2 cut(s) 232, 1468
BstF5I GGATG 8 cut(s) 52, 142, 394, 601, 649, 862, 1104, 1405
BstKTI GATC 2 cut(s) 743, 1156
BstMAI GTCTC 1 cut(s) 78
BstMBI GATC 2 cut(s) 740, 1153
BstMWI GCNNNNNNNGC 5 cut(s) 415, 899, 929, 953, 1780
BstNI CCWGG 2 cut(s) 1170, 1382
BstNSI RCATGY 2 cut(s) 334, 1273
BstSCI CCNGG 2 cut(s) 1168, 1380
BstSFI CTRYAG 1 cut(s) 37
BstV1I GCAGC 2 cut(s) 880, 1734
BstV2I GAAGAC 2 cut(s) 1229, 1266
BstX2I RGATCY 1 cut(s) 740
BstXI CCANNNNNNTGG 1 cut(s) 1566
BstYI RGATCY 1 cut(s) 740
Bsu15I ATCGAT 1 cut(s) 1052
BsuI GTATCC 1 cut(s) 1097
BsuRI GGCC 5 cut(s) 624, 947, 1196, 1616, 1783
BsuTUI ATCGAT 1 cut(s) 1052
BtgI CCRYGG 2 cut(s) 232, 1468
BtgZI GCGATG 1 cut(s) 1703
BtsCI GGATG 8 cut(s) 52, 142, 394, 601, 649, 862, 1104, 1405
BtsIMutI CAGTG 6 cut(s) 217, 571, 1437, 1564, 1611, 1777
Cfr10I RCCGGY 2 cut(s) 1612, 1783
ClaI ATCGAT 1 cut(s) 1052
CseI GACGC 1 cut(s) 1763
Csp6I GTAC 3 cut(s) 436, 1010, 1532
CspCI CAANNNNNGTGG 4 cut(s) 1186, 1221, 1587, 1622
CviAII CATG 7 cut(s) 248, 331, 1270, 1295, 1390, 1469, 1712
CviQI GTAC 3 cut(s) 436, 1010, 1532
DpnI GATC 2 cut(s) 742, 1155
DpnII GATC 2 cut(s) 740, 1153
EaeI YGGCCR 3 cut(s) 945, 1194, 1781
Eam1104I CTCTTC 6 cut(s) 215, 289, 387, 1032, 1636, 1656
EarI CTCTTC 6 cut(s) 215, 289, 387, 1032, 1636, 1656
Ecl136II GAGCTC 1 cut(s) 1758
Eco130I CCWWGG 2 cut(s) 383, 1468
Eco24I GRGCYC 3 cut(s) 1437, 1573, 1760
Eco53kI GAGCTC 1 cut(s) 1758
Eco57I CTGAAG 2 cut(s) 425, 1352
EcoICRI GAGCTC 1 cut(s) 1758
EcoRII CCWGG 2 cut(s) 1168, 1380
EcoT14I CCWWGG 2 cut(s) 383, 1468
EcoT38I GRGCYC 3 cut(s) 1437, 1573, 1760
ErhI CCWWGG 2 cut(s) 383, 1468
FaeI CATG 7 cut(s) 251, 334, 1273, 1298, 1393, 1472, 1715
FalI AAGNNNNNCTT 2 cut(s) 1225, 1257
FaqI GGGAC 1 cut(s) 1653
FatI CATG 7 cut(s) 247, 330, 1269, 1294, 1389, 1468, 1711
FauI CCCGC 2 cut(s) 1204, 1678
Fnu4HI GCNGC 3 cut(s) 6, 894, 1723
FokI GGATG 8 cut(s) 59, 149, 401, 608, 656, 869, 1111, 1412
FriOI GRGCYC 3 cut(s) 1437, 1573, 1760
Fsp4HI GCNGC 3 cut(s) 6, 894, 1723
FspBI CTAG 4 cut(s) 698, 933, 1043, 1458
GluI GCNGC 3 cut(s) 6, 894, 1723
GsaI CCCAGC 1 cut(s) 906
GsuI CTGGAG 2 cut(s) 1191, 1451
HaeIII GGCC 5 cut(s) 624, 947, 1196, 1616, 1783
HapII CCGG 3 cut(s) 1397, 1613, 1784
HgaI GACGC 1 cut(s) 1763
Hin1II CATG 7 cut(s) 251, 334, 1273, 1298, 1393, 1472, 1715
HincII GTYRAC 1 cut(s) 1324
HindII GTYRAC 1 cut(s) 1324
HindIII AAGCTT 1 cut(s) 509
HpaII CCGG 3 cut(s) 1397, 1613, 1784
HphI GGTGA 5 cut(s) 28, 155, 733, 1492, 1536
Hpy166II GTNNAC 1 cut(s) 1324
Hpy188III TCNNGA 2 cut(s) 835, 1592
Hpy8I GTNNAC 1 cut(s) 1324
HpyAV CCTTC 6 cut(s) 65, 107, 687, 964, 1279, 1373
HpyCH4III ACNGT 3 cut(s) 221, 566, 1531
HpyCH4IV ACGT 2 cut(s) 473, 1326
HpyF10VI GCNNNNNNNGC 5 cut(s) 415, 899, 929, 953, 1780
HpySE526I ACGT 2 cut(s) 473, 1326
Hsp92II CATG 7 cut(s) 251, 334, 1273, 1298, 1393, 1472, 1715
Kzo9I GATC 2 cut(s) 740, 1153
LguI GCTCTTC 1 cut(s) 1032
LmnI GCTCC 2 cut(s) 1336, 1432
Lsp1109I GCAGC 2 cut(s) 880, 1734
LweI GCATC 4 cut(s) 658, 762, 799, 1726
MaeI CTAG 4 cut(s) 698, 933, 1043, 1458
MaeII ACGT 2 cut(s) 473, 1326
MaeIII GTNAC 5 cut(s) 143, 469, 598, 1348, 1775
MalI GATC 2 cut(s) 742, 1155
MboI GATC 2 cut(s) 740, 1153
MfeI CAATTG 1 cut(s) 1278
MflI RGATCY 1 cut(s) 740
MhlI GDGCHC 5 cut(s) 1143, 1437, 1573, 1711, 1760
MlsI TGGCCA 1 cut(s) 947
MluCI AATT 4 cut(s) 58, 263, 500, 1278
MluNI TGGCCA 1 cut(s) 947
MlyI GAGTC 4 cut(s) 143, 892, 1130, 1451
MmeI TCCRAC 1 cut(s) 323
Mox20I TGGCCA 1 cut(s) 947
MscI TGGCCA 1 cut(s) 947
MseI TTAA 6 cut(s) 291, 375, 521, 702, 1583, 1797
MslI CAYNNNNRTG 1 cut(s) 1689
Msp20I TGGCCA 1 cut(s) 947
MspI CCGG 3 cut(s) 1397, 1613, 1784
MspR9I CCNGG 2 cut(s) 1170, 1382
MunI CAATTG 1 cut(s) 1278
Mva1269I GAATGC 2 cut(s) 759, 1680
MvaI CCWGG 2 cut(s) 1170, 1382
MwoI GCNNNNNNNGC 5 cut(s) 415, 899, 929, 953, 1780
NcoI CCATGG 1 cut(s) 1468
NdeII GATC 2 cut(s) 740, 1153
NlaIII CATG 7 cut(s) 251, 334, 1273, 1298, 1393, 1472, 1715
NlaIV GGNNCC 3 cut(s) 1434, 1611, 1657
NmuCI GTSAC 4 cut(s) 143, 469, 1348, 1775
NspI RCATGY 2 cut(s) 334, 1273
NspV TTCGAA 1 cut(s) 213
PciI ACATGT 2 cut(s) 330, 1269
PciSI GCTCTTC 1 cut(s) 1032
PctI GAATGC 2 cut(s) 759, 1680
PfeI GAWTC 7 cut(s) 28, 155, 182, 237, 425, 823, 1060
PkrI GCNGC 3 cut(s) 7, 895, 1724
PleI GAGTC 4 cut(s) 143, 891, 1129, 1450
PpsI GAGTC 4 cut(s) 143, 891, 1129, 1450
PscI ACATGT 2 cut(s) 330, 1269
Psp124BI GAGCTC 1 cut(s) 1760
Psp6I CCWGG 2 cut(s) 1168, 1380
PspFI CCCAGC 1 cut(s) 902
PspGI CCWGG 2 cut(s) 1168, 1380
PspN4I GGNNCC 3 cut(s) 1434, 1611, 1657
PsuI RGATCY 1 cut(s) 740
RsaI GTAC 3 cut(s) 437, 1011, 1533
RsaNI GTAC 3 cut(s) 436, 1010, 1532
RseI CAYNNNNRTG 1 cut(s) 1689
SacI GAGCTC 1 cut(s) 1760
SapI GCTCTTC 1 cut(s) 1032
SaqAI TTAA 6 cut(s) 291, 375, 521, 702, 1583, 1797
SatI GCNGC 3 cut(s) 6, 894, 1723
Sau3AI GATC 2 cut(s) 740, 1153
SchI GAGTC 4 cut(s) 143, 892, 1130, 1451
ScrFI CCNGG 2 cut(s) 1170, 1382
SduI GDGCHC 5 cut(s) 1143, 1437, 1573, 1711, 1760
SfaNI GCATC 4 cut(s) 658, 762, 799, 1726
SfcI CTRYAG 1 cut(s) 37
SfuI TTCGAA 1 cut(s) 213
SmiMI CAYNNNNRTG 1 cut(s) 1689
SmlI CTYRAG 1 cut(s) 1675
SmoI CTYRAG 1 cut(s) 1675
Sse9I AATT 4 cut(s) 58, 263, 500, 1278
SsiI CCGC 5 cut(s) 5, 641, 1211, 1334, 1671
SspMI CTAG 4 cut(s) 698, 933, 1043, 1458
SstI GAGCTC 1 cut(s) 1760
StyD4I CCNGG 2 cut(s) 1168, 1380
StyI CCWWGG 2 cut(s) 383, 1468
TaaI ACNGT 3 cut(s) 221, 566, 1531
TaiI ACGT 2 cut(s) 476, 1329
TaqI TCGA 7 cut(s) 213, 240, 273, 534, 560, 1052, 1309
TasI AATT 4 cut(s) 58, 263, 500, 1278
TatI WGTACW 1 cut(s) 435
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 7 cut(s) 28, 155, 182, 237, 425, 823, 1060
Tru1I TTAA 6 cut(s) 291, 375, 521, 702, 1583, 1797
Tru9I TTAA 6 cut(s) 291, 375, 521, 702, 1583, 1797
TscAI CASTG 6 cut(s) 224, 571, 1444, 1571, 1611, 1784
TseFI GTSAC 4 cut(s) 143, 469, 1348, 1775
TseI GCWGC 2 cut(s) 893, 1722
Tsp45I GTSAC 4 cut(s) 143, 469, 1348, 1775
TspDTI ATGAA 7 cut(s) 63, 236, 405, 477, 1406, 1416, 1673
TspGWI ACGGA 1 cut(s) 249
TspRI CASTG 6 cut(s) 224, 571, 1444, 1571, 1611, 1784
XceI RCATGY 2 cut(s) 334, 1273
XspI CTAG 4 cut(s) 698, 933, 1043, 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.