RchiOBHm_Chr1g0326471
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
15025416 .. 15025736
321 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55610

Sequence Viewer

Length: 171 bp
ATGTCTTGTGTTGGCAAGGAGCTCGTTGATGGTGCGGCTAAAGTCCCTATAGTTGATGTCGTGGAAGATCATGGTTTGGTGACCAGTGCTGCTATTCTCCAGGTTGATGTTGTGCTATTATCTAATTGTGAAATTTGCACATCATATGACTTAAATTTGCTATTGGTTTAA

Protein Analysis

56

Amino Acids

5.89

Weight (kDa)

4.05

Isoelectric Point (pI)

30.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012516)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 35
AcsI RAATTY 2 cut(s) 132, 154
AjnI CCWGG 1 cut(s) 99
AluBI AGCT 1 cut(s) 22
AluI AGCT 1 cut(s) 22
Alw21I GWGCWC 1 cut(s) 24
ApeKI GCWGC 1 cut(s) 89
ApoI RAATTY 2 cut(s) 132, 154
AsuHPI GGTGA 1 cut(s) 91
BanII GRGCYC 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 24
BbvI GCAGC 1 cut(s) 76
BccI CCATC 1 cut(s) 23
BcgI CGANNNNNNTGC 2 cut(s) 4, 38
BciT130I CCWGG 1 cut(s) 101
BfmI CTRYAG 1 cut(s) 48
BisI GCNGC 2 cut(s) 36, 90
BlsI GCNGC 2 cut(s) 37, 91
Bme1390I CCNGG 1 cut(s) 101
BmrFI CCNGG 1 cut(s) 101
BpmI CTGGAG 1 cut(s) 83
Bse1I ACTGG 1 cut(s) 84
BseBI CCWGG 1 cut(s) 101
BseNI ACTGG 1 cut(s) 84
BseXI GCAGC 1 cut(s) 76
BsiHKAI GWGCWC 1 cut(s) 24
BslFI GGGAC 1 cut(s) 29
BsmFI GGGAC 1 cut(s) 29
Bsp1286I GDGCHC 1 cut(s) 24
Bsp143I GATC 1 cut(s) 67
BspACI CCGC 1 cut(s) 35
BsrI ACTGG 1 cut(s) 84
BssMI GATC 1 cut(s) 67
Bst2UI CCWGG 1 cut(s) 101
BstEII GGTNACC 1 cut(s) 79
BstKTI GATC 1 cut(s) 70
BstMBI GATC 1 cut(s) 67
BstNI CCWGG 1 cut(s) 101
BstPI GGTNACC 1 cut(s) 79
BstSCI CCNGG 1 cut(s) 99
BstSFI CTRYAG 1 cut(s) 48
BstV1I GCAGC 1 cut(s) 76
BtsIMutI CAGTG 1 cut(s) 91
CviAII CATG 1 cut(s) 71
CviJI RGCY 2 cut(s) 22, 38
CviKI_1 RGCY 2 cut(s) 22, 38
DpnI GATC 1 cut(s) 69
DpnII GATC 1 cut(s) 67
Ecl136II GAGCTC 1 cut(s) 22
Eco24I GRGCYC 1 cut(s) 24
Eco53kI GAGCTC 1 cut(s) 22
Eco91I GGTNACC 1 cut(s) 79
EcoICRI GAGCTC 1 cut(s) 22
EcoO65I GGTNACC 1 cut(s) 79
EcoRII CCWGG 1 cut(s) 99
EcoT38I GRGCYC 1 cut(s) 24
FaeI CATG 1 cut(s) 74
FaiI YATR 4 cut(s) 50, 72, 145, 147
FaqI GGGAC 1 cut(s) 29
FatI CATG 1 cut(s) 70
FauNDI CATATG 1 cut(s) 145
Fnu4HI GCNGC 2 cut(s) 36, 90
FriOI GRGCYC 1 cut(s) 24
Fsp4HI GCNGC 2 cut(s) 36, 90
GluI GCNGC 2 cut(s) 36, 90
GsuI CTGGAG 1 cut(s) 83
Hin1II CATG 1 cut(s) 74
HphI GGTGA 1 cut(s) 91
HpyCH4V TGCA 1 cut(s) 138
Hsp92II CATG 1 cut(s) 74
Kzo9I GATC 1 cut(s) 67
LmnI GCTCC 1 cut(s) 19
LpnPI CCDG 3 cut(s) 86, 97, 113
Lsp1109I GCAGC 1 cut(s) 76
MaeIII GTNAC 1 cut(s) 79
MalI GATC 1 cut(s) 69
MboI GATC 1 cut(s) 67
MboII GAAGA 1 cut(s) 77
MhlI GDGCHC 1 cut(s) 24
MluCI AATT 3 cut(s) 124, 132, 154
MseI TTAA 2 cut(s) 152, 169
MspR9I CCNGG 1 cut(s) 101
MvaI CCWGG 1 cut(s) 101
NdeI CATATG 1 cut(s) 145
NdeII GATC 1 cut(s) 67
NlaIII CATG 1 cut(s) 74
NmuCI GTSAC 1 cut(s) 79
PkrI GCNGC 2 cut(s) 37, 91
Psp124BI GAGCTC 1 cut(s) 24
Psp6I CCWGG 1 cut(s) 99
PspEI GGTNACC 1 cut(s) 79
PspGI CCWGG 1 cut(s) 99
SacI GAGCTC 1 cut(s) 24
SaqAI TTAA 2 cut(s) 152, 169
SatI GCNGC 2 cut(s) 36, 90
Sau3AI GATC 1 cut(s) 67
ScrFI CCNGG 1 cut(s) 101
SduI GDGCHC 1 cut(s) 24
SetI ASST 2 cut(s) 24, 105
SfcI CTRYAG 1 cut(s) 48
SgeI CNNG 8 cut(s) 18, 28, 35, 73, 83, 96, 112, 113
Sse9I AATT 3 cut(s) 124, 132, 154
SsiI CCGC 1 cut(s) 35
SstI GAGCTC 1 cut(s) 24
StyD4I CCNGG 1 cut(s) 99
TasI AATT 3 cut(s) 124, 132, 154
TauI GCSGC 1 cut(s) 38
Tru1I TTAA 2 cut(s) 152, 169
Tru9I TTAA 2 cut(s) 152, 169
TscAI CASTG 1 cut(s) 91
TseFI GTSAC 1 cut(s) 79
TseI GCWGC 1 cut(s) 89
Tsp45I GTSAC 1 cut(s) 79
TspRI CASTG 1 cut(s) 91
XapI RAATTY 2 cut(s) 132, 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.