Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0012516

Physical Location & Seq

Genomic Coordinates Reverse (-)

2752471 .. 2756970

Gene Structure 4500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g03320.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGGCAAAATCAAACCCTCCCTCCTCCCTTTCTCTCTCAAGATTACTCATGGCGAAGAACGGCTCCGAATACGAACCCACATTCACAGACGAAGAATCCGAAGAGCTCCAAGACTGGAACGATTGGAATGCAGAACCAGAAGAAGAAGACGAAGAAGAAGAAGAGGGCTCAGACTTGCTGTGCTTGTTCTGCGACTCCAGGTACAGCTCGTGCGACGACCTCTTCGACCACTGCACTTCGACCCACCGTTTCGACTTTCAGGCCGTTCGGAAAGCGCTGGGTCTGAATTTCTACGGCTCCTTCAAGCTCATTAACTTCGTTCGCTCTCAGGTTGCTGAAAACAGATGTTGGAGTTGCGGGCTGACTTGTCATTCCAACCAAGATCTACAGAATCATTTACATGAAACAGTCAATTTCAAAGACATTACACCTGGATGGGATAGTGATGAGTATCTAAAACCTTTCTTGCAAGATGATTCGGTCTTGTATAGCTTTGGTGAAGATGAAGAAGGTGAAGATGACTACGCTGCAGTAGTTGACAAGGACGAACTTATGAGTGATTTGAGGCAGTTTGAAGAGATCTGCATTGATCATGATATTCATGTGCCAAAGATTGCTATTGATTATGATACTTCTAATGAAAGTGGGAAAAATGTTGCTTCATCATCCAATGGCCCCTTGAATAATGTGGATTCTCCTGGAAAGGCGATCATCAATGGTTTGGATTCAGGAGAACATGTTGGGTCAGCTGATAGAAAGAAAAAAGAACAGCTTTTAAGAGCATATATTCCAAATCATGGCTCAAAGGATATCAAGAATGTTAACAATGACTACTTTGGCGCTTACAGTTCATTTGGCATTCACAGAGAGATGCTCAGTGATAAGGTAAGAATGGATGCTTATGGACAAGCTATTTTAAAGAACCCCTCTCTCTTGAAGAGTGCAGTGGTGATGGATGTAGGTTGTGGCACAGGTATACTAAGTCTCTTTGCAGCCCAAGCAGGTGCTTCAAAGGTAATTGCAATTGAAGCAAGTGAGAAAATGGCTTCAGTGGCAACTCGGATCGCAAAAGATAATGGTCTTTTGTCTAGTAAGAGCCCTGGTGAAAGTACTAACCATGGCACTGGGGTAGTAGAAGTGGTTCAAGGTATGGTTGAGGAGCTTGATAAATCCATGCCAATTGAACCTCATAGTGTTGATGTATTACTGAGTGAATGGATGGGGTACTGCCTACTTTATGAGGCAATGCTCAGTTCAGTGCTTTATGCACGGGATCGGTGGTTAAAACCTGGAGGTGCCATGCTTCCTGATACGGCAACTATTGTGAGATTTGGAAAAGCTGCTACCAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAACATGTCTTCTGTTGGCAAGGAGCTTGTTGAAGGTGCAGCCCAAATCCCTATTGTAGATACCGTGGATGGTCATGGTTTAGTGACCAATGCTGCTGTTCTCCAGAGCTTTGACTTGGTGACAATGAAGCCTGATGAAGTTGATTTTACTGCAATTGTTGAGTTGGAACCAAACTTGAGCGGTGCGGCTAACAGCTTAACTGATTTGGAATCTGAAACAACCTGGTGTTTTGGAGTTGTCTTGTGGTTTGAGACGGGGTTTACCGGCAGGTTTTGCAAAGAAATGCCGGCTGTTTTGTCAACATCCCCATATACTCCCAAAACGCACTGGCAGCAAACAATTTTGACATTTAAGGAACCAATTGCTGTGACATCAGGAAAATCTAACGTGGACGGATCAGCAGCAGTTGGCACTGAAGCTTGTCCGGCTGCAAGGATTCATCTGCGAATAAGCATTGCTCGTGCTTCCCATCATCGTGACATTGACATTTCCTTAGAAACTGCTGGAGTTGATCCTCATGGTCGGAAGCGTAATTGGCCTGTTCAAATTTTTAATCTTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019919 GO:0031323 GO:0031326 GO:0032259 GO:0034969 GO:0035242 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_11 Methyltransf_25 zf-C2H2_2

Protein Analysis

648

Amino Acids

71.19

Weight (kDa)

4.67

Isoelectric Point (pI)

39.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12270
fragaria_vesca	FvH4_7g03650
malus_domestica	MD07G1046100.v1.1
prunus_persica	Prupe.2G042600_v2.0.a1
pyrus_communis	pycom07g03320
rosa_chinensis	RchiOBHm_Chr1g0326421 RchiOBHm_Chr1g0326461 RchiOBHm_Chr1g0326471
rosa_laevigata	RLG00000030070
rosa_multiflora	Rmu_sc0002687.1_g000007 Rmu_sc0006561.1_g000035
rosa_roxburghii	Rroxscaffold_4G00323720 Rroxscaffold_4G00323770
rosa_rugosa	Rorug01G0060400
rosa_samantha	Rh1AG076500 Rh1BG062400 Rh1CG074600 Rh1DG081900
rosa_wichuraiana	Rw1G006100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	992
Acc36I	ACCTGC	2 cut(s)	992, 1638
AccB1I	GGYRCC	1 cut(s)	1295
AccB7I	CCANNNNNTGG	1 cut(s)	797
AccBSI	CCGCTC	1 cut(s)	1560
AccI	GTMKAC	1 cut(s)	976
AciI	CCGC	3 cut(s)	357, 1560, 1565
AclWI	GGATC	4 cut(s)	1070, 1281, 1783, 1886
AcsI	RAATTY	2 cut(s)	286, 1926
AcuI	CTGAAG	2 cut(s)	1032, 1815
AfaI	GTAC	3 cut(s)	203, 1111, 1226
AfeI	AGCGCT	1 cut(s)	276
AfiI	CCNNNNNNNGG	1 cut(s)	797
AflIII	ACRYGT	2 cut(s)	736, 1383
AjnI	CCWGG	6 cut(s)	197, 430, 697, 1099, 1288, 1601
Alw21I	GWGCWC	1 cut(s)	108
Alw26I	GTCTC	2 cut(s)	989, 1625
AlwI	GGATC	4 cut(s)	1070, 1281, 1783, 1886
Aor51HI	AGCGCT	1 cut(s)	276
AoxI	GGCC	3 cut(s)	261, 673, 1916
ApeKI	GCWGC	8 cut(s)	527, 992, 1340, 1418, 1472, 1711, 1781, 1808
ApoI	RAATTY	2 cut(s)	286, 1926
ArsI	GACNNNNNNTTYG	2 cut(s)	206, 238
Asp700I	GAANNNNTTC	1 cut(s)	1140
AspLEI	GCGC	2 cut(s)	277, 842
AspS9I	GGNCC	1 cut(s)	674
AsuHPI	GGTGA	5 cut(s)	509, 524, 961, 1115, 1510
BanI	GGYRCC	1 cut(s)	1295
BanII	GRGCYC	3 cut(s)	108, 170, 1100
BauI	CACGAG	2 cut(s)	208, 1839
BbsI	GAAGAC	3 cut(s)	153, 1343, 1380
Bbv12I	GWGCWC	1 cut(s)	108
BbvI	GCAGC	8 cut(s)	514, 1004, 1327, 1430, 1459, 1723, 1793, 1795
BccI	CCATC	5 cut(s)	429, 946, 1213, 1442, 1857
BceAI	ACGGC	4 cut(s)	76, 248, 310, 1329
BcgI	CGANNNNNNTGC	2 cut(s)	110, 144
BciT130I	CCWGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
BclI	TGATCA	1 cut(s)	589
BcoDI	GTCTC	2 cut(s)	989, 1625
BfaI	CTAG	1 cut(s)	1089
BfmI	CTRYAG	2 cut(s)	386, 528
BfoI	RGCGCY	2 cut(s)	278, 843
BfuAI	ACCTGC	2 cut(s)	992, 1638
BglII	AGATCT	2 cut(s)	382, 579
BisI	GCNGC	9 cut(s)	528, 993, 1341, 1419, 1473, 1566, 1712, 1782, 1809
BlsI	GCNGC	9 cut(s)	529, 994, 1342, 1420, 1474, 1567, 1713, 1783, 1810
BmcAI	AGTACT	1 cut(s)	1111
Bme1390I	CCNGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
BmgT120I	GGNCC	1 cut(s)	674
BmiI	GGNNCC	6 cut(s)	64, 298, 676, 1297, 1548, 1737
BmrFI	CCNGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
BmrI	ACTGGG	1 cut(s)	1134
BmsI	GCATC	2 cut(s)	861, 886
BmuI	ACTGGG	1 cut(s)	1134
BpiI	GAAGAC	3 cut(s)	153, 1343, 1380
BplI	GAGNNNNNCTC	2 cut(s)	858, 890
BpmI	CTGGAG	4 cut(s)	181, 1311, 1466, 1905
BpuEI	CTTGAG	2 cut(s)	22, 1576
BsaBI	GATNNNNATC	1 cut(s)	450
BsaJI	CCNNGG	3 cut(s)	1099, 1117, 1443
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 35, 723, 753
Bsc4I	CCNNNNNNNGG	1 cut(s)	797
Bse118I	RCCGGY	2 cut(s)	1643, 1666
Bse1I	ACTGG	4 cut(s)	119, 1129, 1347, 1712
Bse3DI	GCAATG	2 cut(s)	1251, 1833
Bse8I	GATNNNNATC	1 cut(s)	450
BseBI	CCWGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
BseDI	CCNNGG	3 cut(s)	1099, 1117, 1443
BseGI	GGATG	7 cut(s)	440, 665, 901, 961, 1224, 1453, 1682
BseJI	GATNNNNATC	1 cut(s)	450
BseLI	CCNNNNNNNGG	1 cut(s)	797
BseMI	GCAATG	2 cut(s)	1251, 1833
BseMII	CTCAG	5 cut(s)	183, 341, 889, 1199, 1264
BseNI	ACTGG	4 cut(s)	119, 1129, 1347, 1712
BseRI	GAGGAG	2 cut(s)	13, 1172
BseXI	GCAGC	8 cut(s)	514, 1004, 1327, 1430, 1459, 1723, 1793, 1795
BseYI	CCCAGC	1 cut(s)	277
BsgI	GTGCAG	3 cut(s)	217, 963, 1437
BshFI	GGCC	3 cut(s)	263, 675, 1918
BshNI	GGYRCC	1 cut(s)	1295
BsiHKAI	GWGCWC	1 cut(s)	108
BsiSI	CCGG	3 cut(s)	1644, 1667, 1805
BslI	CCNNNNNNNGG	1 cut(s)	797
BsmAI	GTCTC	2 cut(s)	989, 1625
BsmBI	CGTCTC	1 cut(s)	1625
BsmI	GAATGC	2 cut(s)	133, 858
BsnI	GGCC	3 cut(s)	263, 675, 1918
Bsp1286I	GDGCHC	3 cut(s)	108, 170, 1100
Bsp143I	GATC	8 cut(s)	382, 579, 589, 708, 1062, 1273, 1775, 1891
Bsp19I	CCATGG	1 cut(s)	1117
BspACI	CCGC	3 cut(s)	357, 1560, 1565
BspANI	GGCC	3 cut(s)	263, 675, 1918
BspCNI	CTCAG	5 cut(s)	182, 340, 888, 1200, 1263
BspHI	TCATGA	1 cut(s)	592
BspLI	GGNNCC	6 cut(s)	64, 298, 676, 1297, 1548, 1737
BspMAI	CTGCAG	1 cut(s)	532
BspMI	ACCTGC	2 cut(s)	992, 1638
BspPI	GGATC	4 cut(s)	1070, 1281, 1783, 1886
BspQI	GCTCTTC	1 cut(s)	96
BspT107I	GGYRCC	1 cut(s)	1295
BsrBI	CCGCTC	1 cut(s)	1560
BsrDI	GCAATG	2 cut(s)	1251, 1833
BsrFI	RCCGGY	2 cut(s)	1643, 1666
BsrI	ACTGG	4 cut(s)	119, 1129, 1347, 1712
BssAI	RCCGGY	2 cut(s)	1643, 1666
BssECI	CCNNGG	3 cut(s)	1099, 1117, 1443
BssMI	GATC	8 cut(s)	382, 579, 589, 708, 1062, 1273, 1775, 1891
BssNAI	GTATAC	1 cut(s)	977
BssSI	CACGAG	2 cut(s)	208, 1839
BssT1I	CCWWGG	1 cut(s)	1117
Bst1107I	GTATAC	1 cut(s)	977
Bst2BI	CACGAG	2 cut(s)	208, 1839
Bst2UI	CCWGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
Bst4CI	ACNGT	4 cut(s)	248, 409, 848, 1444
Bst6I	CTCTTC	5 cut(s)	96, 156, 227, 570, 932
BstAPI	GCANNNNNTGC	1 cut(s)	1653
BstC8I	GCNNGC	2 cut(s)	359, 1668
BstDEI	CTNAG	7 cut(s)	169, 327, 875, 980, 1208, 1250, 1873
BstDSI	CCRYGG	2 cut(s)	1117, 1443
BstF5I	GGATG	7 cut(s)	440, 665, 901, 961, 1224, 1453, 1682
BstH2I	RGCGCY	2 cut(s)	278, 843
BstHHI	GCGC	2 cut(s)	277, 842
BstKTI	GATC	8 cut(s)	385, 582, 592, 711, 1065, 1276, 1778, 1894
BstMAI	GTCTC	2 cut(s)	989, 1625
BstMBI	GATC	8 cut(s)	382, 579, 589, 708, 1062, 1273, 1775, 1891
BstMWI	GCNNNNNNNGC	8 cut(s)	189, 998, 1028, 1052, 1653, 1711, 1805, 1915
BstNI	CCWGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
BstNSI	RCATGY	2 cut(s)	740, 1387
BstSCI	CCNGG	6 cut(s)	197, 430, 697, 1099, 1288, 1601
BstSFI	CTRYAG	2 cut(s)	386, 528
BstV1I	GCAGC	8 cut(s)	514, 1004, 1327, 1430, 1459, 1723, 1793, 1795
BstV2I	GAAGAC	3 cut(s)	153, 1343, 1380
BstX2I	RGATCY	2 cut(s)	382, 579
BstXI	CCANNNNNNTGG	1 cut(s)	1124
BstYI	RGATCY	2 cut(s)	382, 579
BstZ17I	GTATAC	1 cut(s)	977
BsuRI	GGCC	3 cut(s)	263, 675, 1918
BtgI	CCRYGG	2 cut(s)	1117, 1443
BtsCI	GGATG	7 cut(s)	440, 665, 901, 961, 1224, 1453, 1682
BtsI	GCAGTG	2 cut(s)	229, 951
BtsIMutI	CAGTG	8 cut(s)	229, 883, 951, 1056, 1122, 1263, 1705, 1791
BveI	ACCTGC	2 cut(s)	992, 1638
Cac8I	GCNNGC	2 cut(s)	359, 1668
CciI	TCATGA	1 cut(s)	592
CfoI	GCGC	2 cut(s)	277, 842
Cfr10I	RCCGGY	2 cut(s)	1643, 1666
Cfr13I	GGNCC	1 cut(s)	674
CsiI	ACCWGGT	1 cut(s)	1601
Csp6I	GTAC	3 cut(s)	202, 1110, 1225
CviQI	GTAC	3 cut(s)	202, 1110, 1225
DdeI	CTNAG	7 cut(s)	169, 327, 875, 980, 1208, 1250, 1873
DpnI	GATC	8 cut(s)	384, 581, 591, 710, 1064, 1275, 1777, 1893
DpnII	GATC	8 cut(s)	382, 579, 589, 708, 1062, 1273, 1775, 1891
DraI	TTTAAA	1 cut(s)	918
Eam1104I	CTCTTC	5 cut(s)	96, 156, 227, 570, 932
EarI	CTCTTC	5 cut(s)	96, 156, 227, 570, 932
Ecl136II	GAGCTC	1 cut(s)	106
Eco130I	CCWWGG	1 cut(s)	1117
Eco24I	GRGCYC	3 cut(s)	108, 170, 1100
Eco32I	GATATC	1 cut(s)	811
Eco47III	AGCGCT	1 cut(s)	276
Eco53kI	GAGCTC	1 cut(s)	106
Eco57I	CTGAAG	2 cut(s)	1032, 1815
EcoICRI	GAGCTC	1 cut(s)	106
EcoRII	CCWGG	6 cut(s)	197, 430, 697, 1099, 1288, 1601
EcoRV	GATATC	1 cut(s)	811
EcoT14I	CCWWGG	1 cut(s)	1117
EcoT38I	GRGCYC	3 cut(s)	108, 170, 1100
ErhI	CCWWGG	1 cut(s)	1117
Esp3I	CGTCTC	1 cut(s)	1625
FalI	AAGNNNNNCTT	2 cut(s)	756, 788
FauI	CCCGC	1 cut(s)	350
FbaI	TGATCA	1 cut(s)	589
FblI	GTMKAC	1 cut(s)	976
Fnu4HI	GCNGC	9 cut(s)	528, 993, 1341, 1419, 1473, 1566, 1712, 1782, 1809
FokI	GGATG	7 cut(s)	447, 652, 908, 968, 1231, 1460, 1669
FriOI	GRGCYC	3 cut(s)	108, 170, 1100
Fsp4HI	GCNGC	9 cut(s)	528, 993, 1341, 1419, 1473, 1566, 1712, 1782, 1809
FspBI	CTAG	1 cut(s)	1089
GlaI	GCGC	2 cut(s)	276, 841
GluI	GCNGC	9 cut(s)	528, 993, 1341, 1419, 1473, 1566, 1712, 1782, 1809
GsaI	CCCAGC	1 cut(s)	281
GsuI	CTGGAG	4 cut(s)	181, 1311, 1466, 1905
HaeII	RGCGCY	2 cut(s)	278, 843
HaeIII	GGCC	3 cut(s)	263, 675, 1918
HapII	CCGG	3 cut(s)	1644, 1667, 1805
HhaI	GCGC	2 cut(s)	277, 842
Hin6I	GCGC	2 cut(s)	275, 840
HinP1I	GCGC	2 cut(s)	275, 840
HincII	GTYRAC	3 cut(s)	538, 823, 1680
HindII	GTYRAC	3 cut(s)	538, 823, 1680
HindIII	AAGCTT	1 cut(s)	1797
HinfI	GANTC	8 cut(s)	95, 194, 391, 476, 692, 725, 1589, 1816
HpaI	GTTAAC	1 cut(s)	823
HpaII	CCGG	3 cut(s)	1644, 1667, 1805
HphI	GGTGA	5 cut(s)	509, 524, 961, 1115, 1510
Hpy166II	GTNNAC	6 cut(s)	538, 823, 977, 1641, 1680, 1771
Hpy188I	TCNGA	8 cut(s)	67, 100, 172, 270, 285, 1062, 1594, 1905
Hpy188III	TCNNGA	9 cut(s)	39, 593, 729, 814, 934, 1307, 1483, 1755, 1856
Hpy8I	GTNNAC	6 cut(s)	538, 823, 977, 1641, 1680, 1771
Hpy99I	CGWCG	1 cut(s)	218
HpyAV	CCTTC	3 cut(s)	310, 503, 1406
HpyCH4III	ACNGT	4 cut(s)	248, 409, 848, 1444
HpyCH4IV	ACGT	1 cut(s)	1767
HpyF10VI	GCNNNNNNNGC	8 cut(s)	189, 998, 1028, 1052, 1653, 1711, 1805, 1915
HpyF3I	CTNAG	7 cut(s)	169, 327, 875, 980, 1208, 1250, 1873
HpySE526I	ACGT	1 cut(s)	1767
HspAI	GCGC	2 cut(s)	275, 840
KroI	GCCGGC	1 cut(s)	1666
KroNI	GCCGGC	1 cut(s)	1668
Ksp22I	TGATCA	1 cut(s)	589
KspAI	GTTAAC	1 cut(s)	823
Kzo9I	GATC	8 cut(s)	382, 579, 589, 708, 1062, 1273, 1775, 1891
LguI	GCTCTTC	1 cut(s)	96
LmnI	GCTCC	5 cut(s)	68, 111, 302, 1159, 1402
Lsp1109I	GCAGC	8 cut(s)	514, 1004, 1327, 1430, 1459, 1723, 1793, 1795
LweI	GCATC	2 cut(s)	861, 886
MabI	ACCWGGT	1 cut(s)	1601
MaeI	CTAG	1 cut(s)	1089
MaeII	ACGT	1 cut(s)	1767
MaeIII	GTNAC	4 cut(s)	1462, 1498, 1747, 1856
MalI	GATC	8 cut(s)	384, 581, 591, 710, 1064, 1275, 1777, 1893
MbiI	CCGCTC	1 cut(s)	1560
MboI	GATC	8 cut(s)	382, 579, 589, 708, 1062, 1273, 1775, 1891
MfeI	CAATTG	4 cut(s)	1023, 1179, 1533, 1740
MflI	RGATCY	2 cut(s)	382, 579
MhlI	GDGCHC	3 cut(s)	108, 170, 1100
MlyI	GAGTC	1 cut(s)	188
MmeI	TCCRAC	4 cut(s)	329, 399, 1524, 1883
MroNI	GCCGGC	1 cut(s)	1666
MroXI	GAANNNNTTC	1 cut(s)	1140
MseI	TTAA	8 cut(s)	312, 776, 822, 917, 1283, 1577, 1731, 1932
MslI	CAYNNNNRTG	3 cut(s)	399, 433, 1854
MspA1I	CMGCKG	1 cut(s)	749
MspI	CCGG	3 cut(s)	1644, 1667, 1805
MspR9I	CCNGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
MunI	CAATTG	4 cut(s)	1023, 1179, 1533, 1740
Mva1269I	GAATGC	2 cut(s)	133, 858
MvaI	CCWGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
MwoI	GCNNNNNNNGC	8 cut(s)	189, 998, 1028, 1052, 1653, 1711, 1805, 1915
NaeI	GCCGGC	1 cut(s)	1668
NcoI	CCATGG	1 cut(s)	1117
NdeII	GATC	8 cut(s)	382, 579, 589, 708, 1062, 1273, 1775, 1891
NgoMIV	GCCGGC	1 cut(s)	1666
NlaIV	GGNNCC	6 cut(s)	64, 298, 676, 1297, 1548, 1737
NmuCI	GTSAC	4 cut(s)	1462, 1498, 1747, 1856
NspI	RCATGY	2 cut(s)	740, 1387
PagI	TCATGA	1 cut(s)	592
PaqCI	CACCTGC	1 cut(s)	992
PciI	ACATGT	2 cut(s)	736, 1383
PciSI	GCTCTTC	1 cut(s)	96
PcsI	WCGNNNNNNNCGW	2 cut(s)	96, 222
PctI	GAATGC	2 cut(s)	133, 858
PdiI	GCCGGC	1 cut(s)	1668
PdmI	GAANNNNTTC	1 cut(s)	1140
PfeI	GAWTC	7 cut(s)	95, 391, 476, 692, 725, 1589, 1816
PflMI	CCANNNNNTGG	1 cut(s)	797
PfoI	TCCNGGA	1 cut(s)	697
PkrI	GCNGC	9 cut(s)	529, 994, 1342, 1420, 1474, 1567, 1713, 1783, 1810
PleI	GAGTC	1 cut(s)	188
PpsI	GAGTC	1 cut(s)	188
PscI	ACATGT	2 cut(s)	736, 1383
Psp124BI	GAGCTC	1 cut(s)	108
Psp6I	CCWGG	6 cut(s)	197, 430, 697, 1099, 1288, 1601
PspFI	CCCAGC	1 cut(s)	277
PspGI	CCWGG	6 cut(s)	197, 430, 697, 1099, 1288, 1601
PspN4I	GGNNCC	6 cut(s)	64, 298, 676, 1297, 1548, 1737
PspPI	GGNCC	1 cut(s)	674
PsrI	GAACNNNNNNTAC	2 cut(s)	1125, 1157
PstI	CTGCAG	1 cut(s)	532
PsuI	RGATCY	2 cut(s)	382, 579
PvuII	CAGCTG	1 cut(s)	749
RsaI	GTAC	3 cut(s)	203, 1111, 1226
RsaNI	GTAC	3 cut(s)	202, 1110, 1225
RseI	CAYNNNNRTG	3 cut(s)	399, 433, 1854
SacI	GAGCTC	1 cut(s)	108
SapI	GCTCTTC	1 cut(s)	96
SaqAI	TTAA	8 cut(s)	312, 776, 822, 917, 1283, 1577, 1731, 1932
SatI	GCNGC	9 cut(s)	528, 993, 1341, 1419, 1473, 1566, 1712, 1782, 1809
Sau3AI	GATC	8 cut(s)	382, 579, 589, 708, 1062, 1273, 1775, 1891
Sau96I	GGNCC	1 cut(s)	674
ScaI	AGTACT	1 cut(s)	1111
SchI	GAGTC	1 cut(s)	188
ScrFI	CCNGG	6 cut(s)	199, 432, 699, 1101, 1290, 1603
SduI	GDGCHC	3 cut(s)	108, 170, 1100
SexAI	ACCWGGT	1 cut(s)	1601
SfaNI	GCATC	2 cut(s)	861, 886
SfcI	CTRYAG	2 cut(s)	386, 528
SmiMI	CAYNNNNRTG	3 cut(s)	399, 433, 1854
SmlI	CTYRAG	2 cut(s)	37, 1555
SmoI	CTYRAG	2 cut(s)	37, 1555
SsiI	CCGC	3 cut(s)	357, 1560, 1565
SspMI	CTAG	1 cut(s)	1089
SstI	GAGCTC	1 cut(s)	108
StyD4I	CCNGG	6 cut(s)	197, 430, 697, 1099, 1288, 1601
StyI	CCWWGG	1 cut(s)	1117
TaaI	ACNGT	4 cut(s)	248, 409, 848, 1444
TaiI	ACGT	1 cut(s)	1770
TaqI	TCGA	3 cut(s)	225, 239, 252
TaqII	GACCGA	1 cut(s)	469
TatI	WGTACW	1 cut(s)	1109
TauI	GCSGC	1 cut(s)	1568
TfiI	GAWTC	7 cut(s)	95, 391, 476, 692, 725, 1589, 1816
Tru1I	TTAA	8 cut(s)	312, 776, 822, 917, 1283, 1577, 1731, 1932
Tru9I	TTAA	8 cut(s)	312, 776, 822, 917, 1283, 1577, 1731, 1932
TscAI	CASTG	8 cut(s)	236, 883, 951, 1056, 1129, 1263, 1712, 1798
TseFI	GTSAC	4 cut(s)	1462, 1498, 1747, 1856
TseI	GCWGC	8 cut(s)	527, 992, 1340, 1418, 1472, 1711, 1781, 1808
Tsp45I	GTSAC	4 cut(s)	1462, 1498, 1747, 1856
TspDTI	ATGAA	9 cut(s)	417, 519, 590, 651, 654, 840, 1520, 1530, 1808
TspGWI	ACGGA	1 cut(s)	1788
TspRI	CASTG	8 cut(s)	236, 883, 951, 1056, 1129, 1263, 1712, 1798
Van91I	CCANNNNNTGG	1 cut(s)	797
XapI	RAATTY	2 cut(s)	286, 1926
XceI	RCATGY	2 cut(s)	740, 1387
XmiI	GTMKAC	1 cut(s)	976
XmnI	GAANNNNTTC	1 cut(s)	1140
XspI	CTAG	1 cut(s)	1089
ZrmI	AGTACT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.