Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0012516

Physical Location & Seq

Genomic Coordinates Forward (+)

12429431 .. 12433689

Gene Structure 4259 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G006100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGCGAACCGTACGGAATACGACCCGACCTTGACAGACGACGAAGACGAAGTTGAGGAGCTCCAAGACTGGGACGATTGGAACGCCGAAGAAGAAGAAGAAGAGAGCTCCGACTTGGACTCAGACTTTCTCTGCTTCTTCTGCGACTCCAGGTTCAGTTCCTGCGATGAACTGTTCGACCACTGCAGCGCCACTCACCATTTCGATTTTCGCGCCATTCGGAAAGCCCTGGGCTTAAGCTTCTACAGCTCCTTCAAGCTTATTAACTACCTTCGCTCTCAGGTTGCGGAAAACAGATGTTGGAGTTGCGGGCTAAGCTGTCAGTCCAACAAAGATTTACAAAATCATTTACATGAAACAGTCAATTTGAAAGACATTAAACCTATGTGGAATAGCGATGAGTATCTCAAGCCTTTTTTGCAAGATGATTCAGTCTTGTTTAGTTTCGGTGAAGATGAAGACGGCGACGATGACTACGCTGTAGCGGTTGACAAGGACGAACTTATGAGTGATTTGCGGCATTTTGAAGAGATTTGCATTGATCATCAGATTCATGTGGAAAAGATTGCTGGTGAGTCTGACAACTCTTGTGAGAGTGGGAGAAGGGATGTTGATTCACCATCGAATGGCTACTTGAACACAGCTAGCTCATCTGGAAAGGTGACTGCCAACGGTGTGAATTCAGGAGAGCATGTTGGGTCAGCTGATAGAAAGACAAAAGGAAAGAGTATAAAAGCATATATTCCAAATCATGTTTCAAAGGATATGAAGAACATCAATGACGATTACTTTGCCTCTTACAGCTCATATGGCATTCACAGAGAAATGCTCAGTGATAAGGTAAGAATGGATGCTTATGGACAAGCTATTTTAAAGAATCCCTCTCTCTTGAAGAGTGCGATAGTGATGGATGTGGGTTGTGGCACAGGTATACTTAGTCTCTTTGCAGCACAAGCAGGGGCTTCAAGGGTAATTGCAGTTGAAGCAAGTGAGAAGATGGCTTCAGTGGCAACTCGGATAGCAAAAGATAATGGTCTTTTGTGGAAGAGTCCAGTTGGCAGTACTGCCAATGGCACTGGGGTAATAGAAGTGGTTCAAGGTATGGTTGAGGAGCTTGATAAATCCATGGTGATCCAACCTCATAGTGTTGATGTATTACTGAGTGAGTGGATGGGGTATTGCCTACTTTATGAGGCAATGCTCAGTTCAGTGCTCTTTGCACGGGATAAGTGGTTGAAACCTGGAGGCGCCATCCTCCCTGACACAGCAACCATTTTTGTTGCTGGATTTGGAAAAGGTGCTACGAGTCTTCCATTTTGGGAAAACGTGTATGGTTTCAACATGTCTTGTGTTGGCAAGGAGCTCGTTGATGGTGCTGCTAAAGTCCCTATAGTTGATGTTGTGGAAGATCATGGTTTGGTGACCAGTGCCGCTATTCTCCAGACCTTTGACTTGGTTACTATGAAACCAGATGAAGTCGATTTTACTGCAAGTGTTGTGTTGGAACCAAACTGCAATGGTGCAACTAGTGGCTCGAATGACTTGAAATCTGAAACAACTTGGTGTTATGGAGTTGTCTTGTGGTTTGAGACTGGTTTTACCAGCAGGTTCTGCAAGGAAAAGCCAGCTGTTTTGTCCACATCCCCATACACTCCCCAAACCCACTGGATGCAAACAATTTTGACATTCCAGGAACCAATTGCTGTGACATCAGGAGAATCTTGCATGGACAGATCGGCAGCAGTTGGCACCGAAGTATGTCCTGCTGCGCGGATTCAGTTGCGCATAAGTATTGCCCGTGCTTCTCAACATCGCAACATTGACATTTCCCTAGAAACTACTGGAATTGATCCTCATGGTCGGAAACACAGCTGGCCTGTGCAACTCTTTAATCTATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019919 GO:0031323 GO:0031326 GO:0032259 GO:0034969 GO:0035242 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_11 Methyltransf_25 zf-C2H2_2

Protein Analysis

633

Amino Acids

69.91

Weight (kDa)

4.67

Isoelectric Point (pI)

38.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C2H2_2	PF12756	45 - 119	1.4e-08	C2H2 type zinc-finger (2 copies)
PrmA	PF06325	298 - 345	2.3e-06	Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_25	PF13649	302 - 416	3e-08	Methyltransferase domain
Methyltransf_11	PF08241	304 - 418	8.6e-08	Methyltransferase domain
PRMT_C	PF22528	421 - 576	9.3e-28	Arginine methyltransferase oligomerization subdomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12270
fragaria_vesca	FvH4_7g03650
malus_domestica	MD07G1046100.v1.1
prunus_persica	Prupe.2G042600_v2.0.a1
pyrus_communis	pycom07g03320
rosa_chinensis	RchiOBHm_Chr1g0326421 RchiOBHm_Chr1g0326461 RchiOBHm_Chr1g0326471
rosa_laevigata	RLG00000030070
rosa_multiflora	Rmu_sc0002687.1_g000007 Rmu_sc0006561.1_g000035
rosa_roxburghii	Rroxscaffold_4G00323720 Rroxscaffold_4G00323770
rosa_rugosa	Rorug01G0060400
rosa_samantha	Rh1AG076500 Rh1BG062400 Rh1CG074600 Rh1DG081900
rosa_wichuraiana	Rw1G006100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1784
Acc36I	ACCTGC	1 cut(s)	1596
AccB1I	GGYRCC	2 cut(s)	1247, 1748
AccB7I	CCANNNNNTGG	1 cut(s)	626
AccI	GTMKAC	1 cut(s)	931
AccII	CGCG	2 cut(s)	213, 1771
AciI	CCGC	6 cut(s)	287, 309, 485, 517, 1431, 1771
AclWI	GGATC	2 cut(s)	1126, 1844
AcsI	RAATTY	1 cut(s)	679
AcuI	CTGAAG	1 cut(s)	987
AcyI	GRCGYC	1 cut(s)	1248
AfaI	GTAC	2 cut(s)	13, 1063
AfiI	CCNNNNNNNGG	2 cut(s)	70, 626
AflII	CTTAAG	1 cut(s)	235
AflIII	ACRYGT	2 cut(s)	1326, 1341
AhlI	ACTAGT	1 cut(s)	1526
AjnI	CCWGG	4 cut(s)	149, 228, 1240, 1689
AjuI	GAANNNNNNNTTGG	2 cut(s)	739, 771
Alw21I	GWGCWC	4 cut(s)	63, 110, 1215, 1365
Alw26I	GTCTC	2 cut(s)	944, 1583
AlwI	GGATC	2 cut(s)	1126, 1844
AlwNI	CAGNNNCTG	2 cut(s)	162, 1611
AoxI	GGCC	1 cut(s)	1874
ApeKI	GCWGC	5 cut(s)	186, 947, 1376, 1739, 1766
ApoI	RAATTY	1 cut(s)	679
ArsI	GACNNNNNNTTYG	2 cut(s)	773, 805
Asp700I	GAANNNNTTC	1 cut(s)	1092
AspLEI	GCGC	5 cut(s)	191, 215, 1250, 1771, 1785
AsuHPI	GGTGA	7 cut(s)	188, 461, 584, 609, 673, 1141, 1432
AsuNHI	GCTAGC	1 cut(s)	644
BanI	GGYRCC	2 cut(s)	1247, 1748
BanII	GRGCYC	3 cut(s)	63, 110, 1365
BbsI	GAAGAC	3 cut(s)	51, 465, 1301
Bbv12I	GWGCWC	4 cut(s)	63, 110, 1215, 1365
BbvI	GCAGC	5 cut(s)	198, 959, 1363, 1751, 1753
BccI	CCATC	6 cut(s)	628, 901, 991, 1165, 1259, 1364
BceAI	ACGGC	1 cut(s)	478
BcgI	CGANNNNNNTGC	6 cut(s)	773, 807, 1345, 1379, 1469, 1503
BciT130I	CCWGG	4 cut(s)	151, 230, 1242, 1691
BclI	TGATCA	1 cut(s)	541
BcoDI	GTCTC	2 cut(s)	944, 1583
BcuI	ACTAGT	1 cut(s)	1526
BfaI	CTAG	3 cut(s)	645, 1527, 1832
BfmI	CTRYAG	4 cut(s)	184, 244, 480, 1389
BfoI	RGCGCY	2 cut(s)	192, 1251
BfrI	CTTAAG	1 cut(s)	235
BfuAI	ACCTGC	1 cut(s)	1596
BisI	GCNGC	7 cut(s)	187, 518, 948, 1377, 1431, 1740, 1767
BlpI	GCTNAGC	1 cut(s)	314
BlsI	GCNGC	7 cut(s)	188, 519, 949, 1378, 1432, 1741, 1768
BmcAI	AGTACT	1 cut(s)	1063
Bme1390I	CCNGG	4 cut(s)	151, 230, 1242, 1691
BmiI	GGNNCC	4 cut(s)	1249, 1506, 1695, 1750
BmrFI	CCNGG	4 cut(s)	151, 230, 1242, 1691
BmrI	ACTGGG	2 cut(s)	79, 1086
BmsI	GCATC	2 cut(s)	841, 1659
BmtI	GCTAGC	1 cut(s)	648
BmuI	ACTGGG	2 cut(s)	79, 1086
BpiI	GAAGAC	3 cut(s)	51, 465, 1301
BplI	GAGNNNNNCTC	2 cut(s)	813, 845
BpmI	CTGGAG	3 cut(s)	133, 1263, 1424
Bpu1102I	GCTNAGC	1 cut(s)	314
BpuEI	CTTGAG	1 cut(s)	392
BsaBI	GATNNNNATC	1 cut(s)	402
BsaHI	GRCGYC	1 cut(s)	1248
BsaJI	CCNNGG	3 cut(s)	228, 229, 1125
BsaXI	ACNNNNNCTCC	2 cut(s)	678, 708
Bsc4I	CCNNNNNNNGG	2 cut(s)	70, 626
Bse1I	ACTGG	7 cut(s)	74, 1052, 1081, 1425, 1597, 1670, 1846
Bse3DI	GCAATG	2 cut(s)	1203, 1522
Bse8I	GATNNNNATC	1 cut(s)	402
BseBI	CCWGG	4 cut(s)	151, 230, 1242, 1691
BseDI	CCNNGG	3 cut(s)	228, 229, 1125
BseGI	GGATG	7 cut(s)	613, 856, 916, 1176, 1251, 1640, 1674
BseJI	GATNNNNATC	1 cut(s)	402
BseLI	CCNNNNNNNGG	2 cut(s)	70, 626
BseMI	GCAATG	2 cut(s)	1203, 1522
BseMII	CTCAG	5 cut(s)	135, 293, 844, 1151, 1216
BseNI	ACTGG	7 cut(s)	74, 1052, 1081, 1425, 1597, 1670, 1846
BseRI	GAGGAG	2 cut(s)	71, 1124
BseXI	GCAGC	5 cut(s)	198, 959, 1363, 1751, 1753
Bsh1236I	CGCG	2 cut(s)	213, 1771
BshFI	GGCC	1 cut(s)	1876
BshNI	GGYRCC	2 cut(s)	1247, 1748
BsiHKAI	GWGCWC	4 cut(s)	63, 110, 1215, 1365
BsiWI	CGTACG	1 cut(s)	11
BslFI	GGGAC	2 cut(s)	86, 1370
BslI	CCNNNNNNNGG	2 cut(s)	70, 626
BsmAI	GTCTC	2 cut(s)	944, 1583
BsmFI	GGGAC	2 cut(s)	86, 1370
BsmI	GAATGC	1 cut(s)	813
BsnI	GGCC	1 cut(s)	1876
Bsp1286I	GDGCHC	4 cut(s)	63, 110, 1215, 1365
Bsp143I	GATC	5 cut(s)	541, 1131, 1408, 1733, 1849
Bsp1720I	GCTNAGC	1 cut(s)	314
Bsp19I	CCATGG	1 cut(s)	1125
BspACI	CCGC	6 cut(s)	287, 309, 485, 517, 1431, 1771
BspANI	GGCC	1 cut(s)	1876
BspCNI	CTCAG	5 cut(s)	134, 292, 843, 1152, 1215
BspFNI	CGCG	2 cut(s)	213, 1771
BspLI	GGNNCC	4 cut(s)	1249, 1506, 1695, 1750
BspMAI	CTGCAG	1 cut(s)	188
BspMI	ACCTGC	1 cut(s)	1596
BspOI	GCTAGC	1 cut(s)	648
BspPI	GGATC	2 cut(s)	1126, 1844
BspT107I	GGYRCC	2 cut(s)	1247, 1748
BspTI	CTTAAG	1 cut(s)	235
BsrDI	GCAATG	2 cut(s)	1203, 1522
BsrI	ACTGG	7 cut(s)	74, 1052, 1081, 1425, 1597, 1670, 1846
BssECI	CCNNGG	3 cut(s)	228, 229, 1125
BssMI	GATC	5 cut(s)	541, 1131, 1408, 1733, 1849
BssNAI	GTATAC	1 cut(s)	932
BssNI	GRCGYC	1 cut(s)	1248
BssT1I	CCWWGG	1 cut(s)	1125
Bst1107I	GTATAC	1 cut(s)	932
Bst2UI	CCWGG	4 cut(s)	151, 230, 1242, 1691
Bst4CI	ACNGT	4 cut(s)	11, 174, 361, 674
Bst6I	CTCTTC	4 cut(s)	96, 522, 887, 1040
BstACI	GRCGYC	1 cut(s)	1248
BstAFI	CTTAAG	1 cut(s)	235
BstAPI	GCANNNNNTGC	1 cut(s)	1611
BstC8I	GCNNGC	4 cut(s)	311, 646, 1626, 1874
BstDEI	CTNAG	8 cut(s)	121, 279, 314, 830, 935, 1160, 1202, 1899
BstDSI	CCRYGG	1 cut(s)	1125
BstEII	GGTNACC	1 cut(s)	1420
BstF5I	GGATG	7 cut(s)	613, 856, 916, 1176, 1251, 1640, 1674
BstFNI	CGCG	2 cut(s)	213, 1771
BstH2I	RGCGCY	2 cut(s)	192, 1251
BstHHI	GCGC	5 cut(s)	191, 215, 1250, 1771, 1785
BstKTI	GATC	5 cut(s)	544, 1134, 1411, 1736, 1852
BstMAI	GTCTC	2 cut(s)	944, 1583
BstMBI	GATC	5 cut(s)	541, 1131, 1408, 1733, 1849
BstMWI	GCNNNNNNNGC	9 cut(s)	141, 246, 315, 418, 810, 953, 983, 1007, 1611
BstNI	CCWGG	4 cut(s)	151, 230, 1242, 1691
BstNSI	RCATGY	2 cut(s)	695, 1345
BstPI	GGTNACC	1 cut(s)	1420
BstSCI	CCNGG	4 cut(s)	149, 228, 1240, 1689
BstSFI	CTRYAG	4 cut(s)	184, 244, 480, 1389
BstUI	CGCG	2 cut(s)	213, 1771
BstV1I	GCAGC	5 cut(s)	198, 959, 1363, 1751, 1753
BstV2I	GAAGAC	3 cut(s)	51, 465, 1301
BstZ17I	GTATAC	1 cut(s)	932
BsuRI	GGCC	1 cut(s)	1876
BtgI	CCRYGG	1 cut(s)	1125
BtgZI	GCGATG	3 cut(s)	180, 411, 1796
BtsCI	GGATG	7 cut(s)	613, 856, 916, 1176, 1251, 1640, 1674
BtsI	GCAGTG	1 cut(s)	181
BtsIMutI	CAGTG	7 cut(s)	181, 838, 1011, 1074, 1215, 1432, 1663
BveI	ACCTGC	1 cut(s)	1596
Cac8I	GCNNGC	4 cut(s)	311, 646, 1626, 1874
CaiI	CAGNNNCTG	2 cut(s)	162, 1611
CfoI	GCGC	5 cut(s)	191, 215, 1250, 1771, 1785
Csp6I	GTAC	2 cut(s)	12, 1062
CviAII	CATG	9 cut(s)	353, 554, 692, 752, 1126, 1342, 1412, 1726, 1856
CviQI	GTAC	2 cut(s)	12, 1062
DdeI	CTNAG	8 cut(s)	121, 279, 314, 830, 935, 1160, 1202, 1899
DinI	GGCGCC	1 cut(s)	1249
DpnI	GATC	5 cut(s)	543, 1133, 1410, 1735, 1851
DpnII	GATC	5 cut(s)	541, 1131, 1408, 1733, 1849
DraI	TTTAAA	1 cut(s)	873
Eam1104I	CTCTTC	4 cut(s)	96, 522, 887, 1040
EarI	CTCTTC	4 cut(s)	96, 522, 887, 1040
Ecl136II	GAGCTC	3 cut(s)	61, 108, 1363
Eco130I	CCWWGG	1 cut(s)	1125
Eco24I	GRGCYC	3 cut(s)	63, 110, 1365
Eco53kI	GAGCTC	3 cut(s)	61, 108, 1363
Eco57I	CTGAAG	1 cut(s)	987
Eco91I	GGTNACC	1 cut(s)	1420
EcoICRI	GAGCTC	3 cut(s)	61, 108, 1363
EcoO65I	GGTNACC	1 cut(s)	1420
EcoRI	GAATTC	1 cut(s)	679
EcoRII	CCWGG	4 cut(s)	149, 228, 1240, 1689
EcoT14I	CCWWGG	1 cut(s)	1125
EcoT38I	GRGCYC	3 cut(s)	63, 110, 1365
EgeI	GGCGCC	1 cut(s)	1249
EheI	GGCGCC	1 cut(s)	1249
ErhI	CCWWGG	1 cut(s)	1125
FaeI	CATG	9 cut(s)	356, 557, 695, 755, 1129, 1345, 1415, 1729, 1859
FaqI	GGGAC	2 cut(s)	86, 1370
FatI	CATG	9 cut(s)	352, 553, 691, 751, 1125, 1341, 1411, 1725, 1855
FauI	CCCGC	1 cut(s)	302
FauNDI	CATATG	1 cut(s)	808
FbaI	TGATCA	1 cut(s)	541
FblI	GTMKAC	1 cut(s)	931
Fnu4HI	GCNGC	7 cut(s)	187, 518, 948, 1377, 1431, 1740, 1767
FokI	GGATG	7 cut(s)	620, 863, 923, 1183, 1238, 1627, 1681
FriOI	GRGCYC	3 cut(s)	63, 110, 1365
Fsp4HI	GCNGC	7 cut(s)	187, 518, 948, 1377, 1431, 1740, 1767
FspBI	CTAG	3 cut(s)	645, 1527, 1832
FspI	TGCGCA	1 cut(s)	1784
GlaI	GCGC	5 cut(s)	190, 214, 1249, 1770, 1784
GluI	GCNGC	7 cut(s)	187, 518, 948, 1377, 1431, 1740, 1767
GsuI	CTGGAG	3 cut(s)	133, 1263, 1424
HaeII	RGCGCY	2 cut(s)	192, 1251
HaeIII	GGCC	1 cut(s)	1876
HhaI	GCGC	5 cut(s)	191, 215, 1250, 1771, 1785
Hin1I	GRCGYC	1 cut(s)	1248
Hin1II	CATG	9 cut(s)	356, 557, 695, 755, 1129, 1345, 1415, 1729, 1859
Hin6I	GCGC	5 cut(s)	189, 213, 1248, 1769, 1783
HinP1I	GCGC	5 cut(s)	189, 213, 1248, 1769, 1783
HincII	GTYRAC	1 cut(s)	490
HindII	GTYRAC	1 cut(s)	490
HindIII	AAGCTT	2 cut(s)	238, 257
HphI	GGTGA	7 cut(s)	188, 461, 584, 609, 673, 1141, 1432
Hpy166II	GTNNAC	3 cut(s)	490, 932, 1638
Hpy188I	TCNGA	8 cut(s)	112, 124, 222, 549, 580, 1017, 1552, 1863
Hpy188III	TCNNGA	5 cut(s)	654, 684, 889, 1441, 1713
Hpy8I	GTNNAC	3 cut(s)	490, 932, 1638
Hpy99I	CGWCG	2 cut(s)	44, 470
HpyAV	CCTTC	3 cut(s)	262, 281, 597
HpyCH4III	ACNGT	4 cut(s)	11, 174, 361, 674
HpyCH4IV	ACGT	1 cut(s)	1326
HpyF10VI	GCNNNNNNNGC	9 cut(s)	141, 246, 315, 418, 810, 953, 983, 1007, 1611
HpyF3I	CTNAG	8 cut(s)	121, 279, 314, 830, 935, 1160, 1202, 1899
HpySE526I	ACGT	1 cut(s)	1326
Hsp92I	GRCGYC	1 cut(s)	1248
Hsp92II	CATG	9 cut(s)	356, 557, 695, 755, 1129, 1345, 1415, 1729, 1859
HspAI	GCGC	5 cut(s)	189, 213, 1248, 1769, 1783
KasI	GGCGCC	1 cut(s)	1247
Ksp22I	TGATCA	1 cut(s)	541
Kzo9I	GATC	5 cut(s)	541, 1131, 1408, 1733, 1849
LmnI	GCTCC	6 cut(s)	58, 66, 113, 254, 1111, 1360
Lsp1109I	GCAGC	5 cut(s)	198, 959, 1363, 1751, 1753
LweI	GCATC	2 cut(s)	841, 1659
MaeI	CTAG	3 cut(s)	645, 1527, 1832
MaeII	ACGT	1 cut(s)	1326
MaeIII	GTNAC	4 cut(s)	661, 1420, 1456, 1705
MalI	GATC	5 cut(s)	543, 1133, 1410, 1735, 1851
MboI	GATC	5 cut(s)	541, 1131, 1408, 1733, 1849
MfeI	CAATTG	1 cut(s)	1698
MhlI	GDGCHC	4 cut(s)	63, 110, 1215, 1365
MluCI	AATT	6 cut(s)	364, 679, 972, 1677, 1698, 1845
Mly113I	GGCGCC	1 cut(s)	1248
MlyI	GAGTC	5 cut(s)	113, 140, 584, 1057, 1315
MmeI	TCCRAC	6 cut(s)	135, 281, 351, 1159, 1482, 1841
MnlI	CCTC	9 cut(s)	49, 805, 892, 1102, 1149, 1186, 1238, 1265, 1863
MroXI	GAANNNNTTC	1 cut(s)	1092
MseI	TTAA	5 cut(s)	236, 264, 378, 872, 1890
MslI	CAYNNNNRTG	1 cut(s)	351
MspA1I	CMGCKG	3 cut(s)	704, 1628, 1872
MspCI	CTTAAG	1 cut(s)	235
MspR9I	CCNGG	4 cut(s)	151, 230, 1242, 1691
MunI	CAATTG	1 cut(s)	1698
Mva1269I	GAATGC	1 cut(s)	813
MvaI	CCWGG	4 cut(s)	151, 230, 1242, 1691
MvnI	CGCG	2 cut(s)	213, 1771
MwoI	GCNNNNNNNGC	9 cut(s)	141, 246, 315, 418, 810, 953, 983, 1007, 1611
NarI	GGCGCC	1 cut(s)	1248
NcoI	CCATGG	1 cut(s)	1125
NdeI	CATATG	1 cut(s)	808
NdeII	GATC	5 cut(s)	541, 1131, 1408, 1733, 1849
NheI	GCTAGC	1 cut(s)	644
NlaIII	CATG	9 cut(s)	356, 557, 695, 755, 1129, 1345, 1415, 1729, 1859
NlaIV	GGNNCC	4 cut(s)	1249, 1506, 1695, 1750
NmuCI	GTSAC	3 cut(s)	661, 1420, 1705
NsbI	TGCGCA	1 cut(s)	1784
NspI	RCATGY	2 cut(s)	695, 1345
PasI	CCCWGGG	1 cut(s)	229
PciI	ACATGT	1 cut(s)	1341
PcsI	WCGNNNNNNNCGW	1 cut(s)	45
PctI	GAATGC	1 cut(s)	813
PdmI	GAANNNNTTC	1 cut(s)	1092
PfeI	GAWTC	6 cut(s)	428, 550, 614, 877, 1718, 1774
Pfl23II	CGTACG	1 cut(s)	11
PflMI	CCANNNNNTGG	1 cut(s)	626
PfoI	TCCNGGA	1 cut(s)	1689
PkrI	GCNGC	7 cut(s)	188, 519, 949, 1378, 1432, 1741, 1768
PleI	GAGTC	5 cut(s)	113, 140, 583, 1056, 1314
PluTI	GGCGCC	1 cut(s)	1251
PpsI	GAGTC	5 cut(s)	113, 140, 583, 1056, 1314
PscI	ACATGT	1 cut(s)	1341
Psp124BI	GAGCTC	3 cut(s)	63, 110, 1365
Psp6I	CCWGG	4 cut(s)	149, 228, 1240, 1689
PspEI	GGTNACC	1 cut(s)	1420
PspGI	CCWGG	4 cut(s)	149, 228, 1240, 1689
PspLI	CGTACG	1 cut(s)	11
PspN4I	GGNNCC	4 cut(s)	1249, 1506, 1695, 1750
PstI	CTGCAG	1 cut(s)	188
PstNI	CAGNNNCTG	2 cut(s)	162, 1611
PvuII	CAGCTG	3 cut(s)	704, 1628, 1872
RsaI	GTAC	2 cut(s)	13, 1063
RsaNI	GTAC	2 cut(s)	12, 1062
RseI	CAYNNNNRTG	1 cut(s)	351
SacI	GAGCTC	3 cut(s)	63, 110, 1365
SaqAI	TTAA	5 cut(s)	236, 264, 378, 872, 1890
SatI	GCNGC	7 cut(s)	187, 518, 948, 1377, 1431, 1740, 1767
Sau3AI	GATC	5 cut(s)	541, 1131, 1408, 1733, 1849
ScaI	AGTACT	1 cut(s)	1063
SchI	GAGTC	5 cut(s)	113, 140, 584, 1057, 1315
ScrFI	CCNGG	4 cut(s)	151, 230, 1242, 1691
SduI	GDGCHC	4 cut(s)	63, 110, 1215, 1365
SfaNI	GCATC	2 cut(s)	841, 1659
SfcI	CTRYAG	4 cut(s)	184, 244, 480, 1389
SfoI	GGCGCC	1 cut(s)	1249
SmiMI	CAYNNNNRTG	1 cut(s)	351
SmlI	CTYRAG	2 cut(s)	235, 407
SmoI	CTYRAG	2 cut(s)	235, 407
SpeI	ACTAGT	1 cut(s)	1526
Sse9I	AATT	6 cut(s)	364, 679, 972, 1677, 1698, 1845
SsiI	CCGC	6 cut(s)	287, 309, 485, 517, 1431, 1771
SspDI	GGCGCC	1 cut(s)	1247
SspMI	CTAG	3 cut(s)	645, 1527, 1832
SstI	GAGCTC	3 cut(s)	63, 110, 1365
StyD4I	CCNGG	4 cut(s)	149, 228, 1240, 1689
StyI	CCWWGG	1 cut(s)	1125
TaaI	ACNGT	4 cut(s)	11, 174, 361, 674
TaiI	ACGT	1 cut(s)	1329
TaqI	TCGA	5 cut(s)	177, 204, 623, 1479, 1535
TasI	AATT	6 cut(s)	364, 679, 972, 1677, 1698, 1845
TatI	WGTACW	1 cut(s)	1061
TauI	GCSGC	2 cut(s)	520, 1433
TfiI	GAWTC	6 cut(s)	428, 550, 614, 877, 1718, 1774
Tru1I	TTAA	5 cut(s)	236, 264, 378, 872, 1890
Tru9I	TTAA	5 cut(s)	236, 264, 378, 872, 1890
TscAI	CASTG	7 cut(s)	188, 838, 1011, 1081, 1215, 1432, 1670
TseFI	GTSAC	3 cut(s)	661, 1420, 1705
TseI	GCWGC	5 cut(s)	186, 947, 1376, 1739, 1766
Tsp45I	GTSAC	3 cut(s)	661, 1420, 1705
TspDTI	ATGAA	7 cut(s)	183, 369, 471, 542, 782, 1478, 1488
TspGWI	ACGGA	1 cut(s)	29
TspRI	CASTG	7 cut(s)	188, 838, 1011, 1081, 1215, 1432, 1670
Van91I	CCANNNNNTGG	1 cut(s)	626
Vha464I	CTTAAG	1 cut(s)	235
XapI	RAATTY	1 cut(s)	679
XceI	RCATGY	2 cut(s)	695, 1345
XmiI	GTMKAC	1 cut(s)	931
XmnI	GAANNNNTTC	1 cut(s)	1092
XspI	CTAG	3 cut(s)	645, 1527, 1832
ZrmI	AGTACT	1 cut(s)	1063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.