AT3G19780

Uncharacterized ACR, COG1678

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009991
Physical Location & Seq
Forward (+)
6870130 .. 6874850
4721 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G19780.2

Sequence Viewer

Length: 3180 bp
ATGAAAACGCCGACGCTCCTCCTCCTTCCATTCTTGGTCTTCGTATCCATAATTCTTCCCTCAAGCTGCCATGGCGAATGGGAAATCCTCACGGAGCAAAACTTCTCTTCTCAGATCCGTCTCCACCCTCACGTCCTCCTCTTTGTCACCACTCCATGGTGTGGTGAGTCCAGATCTCTTAAGTATGAAATTACTCAGATGGTTCAGAGAAGAGAAGAGTTTGGCTTGTTGAAGTTAATGGTTGTATACAGAAACTCAGAAAAGGTGTTAGCACAAGCCATTGGTGCTGCTGTCAATGGGATAACAATTTTGTACTATCACAATAGTGTGCCTTACAACTATCTAGGGAAACTCCGAGCCTCGAATATATTGTCATCTATTCATCCTTATCTGACATCTACGCCTGAAGAACTCCCTCTCAAACATTTGAAGTCTCCAAAGAGTTTGAAAGATTTCCTTCAATCATCTGATAAGGCTTTACTTCTGTTCGAATTTTGCGGATGGACAACTACACTGATGTCTGAGCTGAAGAAAAATGTTACTCAAGATAACCTTTGGCAGGAATGGAACAATATGTGTGGACTCCAAAGTGGATTTGGTAAAGTTCCCTGGCTTGAGGATTTTAGCTATGCGAATGATACTGCTGCTTTGCAGGAACATGGCAGGGTAAATCTGGGTCTTGGACAGACATGTAACCATGAAGAGTTCAAGCGATTTAGTTCATTCCTCTTGAAATTGATTGCCACCACAAAAGAGTTTTCTCTGCCTCCGGAAAGGCAAAAATTTGGTCTGATCACAGAAGAATCATTGGCTTCATCATTTAATTTTGGAAAATCTGATTCGTGGGCAGCGGTCCTTCAGCTGGCAGGATGTCCACATTGTTCTAAGATTTTCAAGGCCGGGGATGACATTCAGAGATTTTTAAAGATGGAAAATCCGATAGTTACAGAGCTGGAGGACGACTGGCAGGACCATGAGTCATCTCTACCTGCAAGTAAACCGTCAGTTATTCTTTTTGTGGATAGATCAAGTGGGTCCTTGGAGGAGATGAGAAGGAGTATAAAAGCACTTGATACCTTCAGACAGGTAGCTGCACAGCATAAATTGTCTGACATAAAAAAGTGGGAGAATGATATTATGTATGAGAACCCCGTTAGTCAAACTGATCAAGAATCGGGGTCCGTGCCACTTCCGAAAACTGTCCAAAAGTTTAAGAAAATTAAGTTCGAGAATAAGGTTTCTTTTATGATTATGGATGGGGGTAAACATGTAGCCCTAGATACTATAGCGCCAGGTATGGAAGGCAGTTCCCTGCAGGAGATACTGAAAAATCTTCTTCACAGAAGAAAAGAAAGTAAATTGAGCTCAATTGCTAAGGATGTTGGTTTCCGTCTGTTATCTGATGATGTGCACATAAAAGTTCTGGATGCGTTACCGTCACAAGCAGAAGTTGTGTCTGGTCAAGATACAACTTCATCTTCTGCAGAAGGTTCCAGTGAAATTTCACTTCACCCTACAGAAGCAGATGTGCAGAACAGAGTCAGTATGAGTTCTGAAGCAAAAGATGAAATGAAATCCTCTGAAATTGAATCCTCCTCCCCTAGTGATGAAGAGCAGGCTACTACAAACAGGAGTGAACAATTAGTAGTGGCAGAAACCGATAAGACTGAGGTTTATTTGAAAGACAATGTTAATGGAGAGATCAAGGTCTCGTTGCACTCAGAACCGAAGGAAGATCTAGTGCATAAATTCACGGGTTCATTTTTCTTCTCTGATGCAAATTATGTTTTACTTAGGGCCCTTACTGGTGATGTAAAGATTCCATCAGCAGTAATTATTGACCCTGCTTTACAACAGCACTATGTCCTTCAAGATAAGTTCAGCTATTCGTCACTGGTCGACTTTCTTGATGGATATCTCAATGGAAGTCTATCTCCTTATGCACAGTCTGAATCTAGCATTCAGACGCCTAAAAGAGCTGCAGTTCCACCTTTTGTTAATCTGGATTTTCACGAGGTGGATTCTATTCCCCGTGTCACAGTCAGTACCTTCTCCCACATGGTTCATGCATGGGATCAATCCAGTGCAGAGAAGGCTCCTTGTCCTCTGTGCCAGGACGTTTTGGTCTTTTTTAGTAATACTTGGTGTGGGTTTTGTCAGAGGATGGAGCTAGTTCTGCATGAAGTTTACCGATCATTAAAGGAATATAAAGCGATTATACAAGGAGGATCCAGGAACAATCAAAGATCTGAATTAGCAGAGACACCAACTAATGGCGAGAATCTAAAATCTCCACTTATCTATTTAATGGATTGCACGTTGAATGATTGCAGCTTGATCCTAAAATCAATAAATCAGAGGGAAGTGTATCCTTCTCTGATATTATTTCCAGCCGAGAGAAACAAAGTCACTCCATATGAAGGGGAGTCATCTGTAACTGACATAACAGAGTTTCTAGCTCGCCATGCGAATAACTCTCGCGAGTTTTTCAGACTCCTTCCTACTCTGTCTAGAAATGGAAGAAGAAACTCAAACAAGGTGGATCAGTCTTCTTCATCTGCGGTAAATAATAAAGTGACAGATGGTGATAAACTTGTTGAGGTCGTTTTAAGGAACAGAGAGCCCGCTGAAAGAGAGGTAAACCACGACCAGGTCAATTCCCAATCGCCTCCAATACACTCGCTCACAAACGCTCCCCAAGTGAAAACTGGCACAGTCCTGGTCGCTACAGAAAAGCTAGCTGCCTCCCTAACATTTGCCAAATCAAAGATTCTGATCATAAAAGCAGGCCCCGAGATCGGTTTCCTGGGCCTAATCTTTAACAAACGGATAAGGTGGAAATCATTCCCTGACCTCGGTGAAACAGCCGAGCTCTTGAAAGAGACTCCTCTATCGTTCGGAGGTCCTGTAGTGGATCCAGGAATACCACTATTAGCTCTGACCCGAGAGCGAGACTCTTCCACAAACCATGATCACCCGGAAATCTCACCAGGCGTGTATTTCCTAGATCATCAATCTGTGGCCCGTCGAATCCAAGAGTTGAAATCTAGAGAGCTAAATCCAAGTGAGTACTGGTTTTTCTTGGGATACTCAAGCTGGAGTTATGAGCAGTTGTTTGATGAGATCGGTCTTGGAGTGTGGGATGTTGATAACAGTGACATTGACTTTGCTTGGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF179 Thioredoxin

Protein Analysis

1059

Amino Acids

119.04

Weight (kDa)

5.59

Isoelectric Point (pI)

48.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF179 PF02622 917 - 1048 2.9e-12 AlgH-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2123
Acc36I ACCTGC 1 cut(s) 997
AccB7I CCANNNNNTGG 3 cut(s) 156, 161, 2273
AccI GTMKAC 2 cut(s) 246, 1899
AccII CGCG 1 cut(s) 2481
AccIII TCCGGA 1 cut(s) 769
AciI CCGC 4 cut(s) 498, 851, 2561, 2625
AclWI GGATC 8 cut(s) 109, 2082, 2223, 2236, 2332, 2550, 2909, 2922
AcsI RAATTY 4 cut(s) 491, 782, 1500, 1748
AcuI CTGAAG 5 cut(s) 426, 548, 842, 1063, 1575
AcyI GRCGYC 1 cut(s) 1967
AdeI CACNNNGTG 1 cut(s) 2017
AfaI GTAC 3 cut(s) 314, 2047, 3071
AfiI CCNNNNNNNGG 9 cut(s) 156, 161, 559, 862, 2273, 2420, 2650, 2798, 2855
AflII CTTAAG 1 cut(s) 179
AflIII ACRYGT 2 cut(s) 689, 1267
AhdI GACNNNNNGTC 1 cut(s) 976
AjiI CACGTC 1 cut(s) 133
AjnI CCWGG 9 cut(s) 608, 1291, 2112, 2231, 2649, 2718, 2805, 2917, 2989
AleI CACNNNNGTG 1 cut(s) 324
Alw21I GWGCWC 3 cut(s) 1367, 1413, 2874
Alw26I GTCTC 6 cut(s) 125, 438, 1714, 2255, 2876, 2946
Alw44I GTGCAC 1 cut(s) 1409
AlwI GGATC 8 cut(s) 109, 2082, 2223, 2236, 2332, 2550, 2909, 2922
Ama87I CYCGRG 2 cut(s) 2792, 2943
Aor13HI TCCGGA 1 cut(s) 769
AoxI GGCC 6 cut(s) 897, 1797, 2788, 2809, 3021, 3173
ApaI GGGCCC 1 cut(s) 1801
ApaLI GTGCAC 1 cut(s) 1409
ApeKI GCWGC 8 cut(s) 66, 287, 644, 848, 1091, 1979, 2331, 2741
ApoI RAATTY 4 cut(s) 491, 782, 1500, 1748
ArsI GACNNNNNNTTYG 5 cut(s) 356, 388, 772, 804, 3149
Asp700I GAANNNNTTC 2 cut(s) 452, 2843
AspLEI GCGC 1 cut(s) 1291
AsuC2I CCSGG 2 cut(s) 901, 2978
AsuHPI GGTGA 8 cut(s) 139, 176, 1502, 1820, 2597, 2870, 2966, 2979
AsuII TTCGAA 1 cut(s) 489
AsuNHI GCTAGC 1 cut(s) 2737
AvaI CYCGRG 2 cut(s) 2792, 2943
AvaII GGWCC 5 cut(s) 853, 970, 1035, 1179, 2903
BaeGI GKGCMC 2 cut(s) 1413, 1801
BamHI GGATCC 2 cut(s) 2228, 2914
BanII GRGCYC 4 cut(s) 1367, 1801, 2625, 2874
BauI CACGAG 1 cut(s) 2012
BbsI GAAGAC 2 cut(s) 31, 2541
Bbv12I GWGCWC 3 cut(s) 1367, 1413, 2874
BbvI GCAGC 8 cut(s) 53, 274, 631, 860, 1078, 1966, 2343, 2728
BccI CCATC 8 cut(s) 193, 495, 922, 1250, 1831, 1904, 2158, 2576
BciT130I CCWGG 9 cut(s) 610, 1293, 2114, 2233, 2651, 2720, 2807, 2919, 2991
BciVI GTATCC 3 cut(s) 55, 2379, 3080
BclI TGATCA 4 cut(s) 792, 1165, 2775, 2971
BcnI CCSGG 2 cut(s) 901, 2978
BcoDI GTCTC 6 cut(s) 125, 438, 1714, 2255, 2876, 2946
BfmI CTRYAG 7 cut(s) 1284, 1313, 1482, 1515, 1980, 2727, 2907
BfoI RGCGCY 1 cut(s) 1292
BfrI CTTAAG 1 cut(s) 179
BfuAI ACCTGC 1 cut(s) 997
BfuI GTATCC 3 cut(s) 55, 2379, 3080
BglII AGATCT 3 cut(s) 173, 1735, 2246
BisI GCNGC 8 cut(s) 67, 288, 645, 849, 1092, 1980, 2332, 2742
BlsI GCNGC 8 cut(s) 68, 289, 646, 850, 1093, 1981, 2333, 2743
BmcAI AGTACT 1 cut(s) 3071
Bme18I GGWCC 5 cut(s) 853, 970, 1035, 1179, 2903
BmeRI GACNNNNNGTC 1 cut(s) 976
BmeT110I CYCGRG 2 cut(s) 2792, 2943
BmgBI CACGTC 1 cut(s) 133
BmiI GGNNCC 8 cut(s) 1036, 1180, 1492, 1799, 2097, 2230, 2791, 2916
BmsI GCATC 2 cut(s) 1417, 1765
BmtI GCTAGC 1 cut(s) 2741
BpiI GAAGAC 2 cut(s) 31, 2541
BplI GAGNNNNNCTC 2 cut(s) 2939, 2971
BpmI CTGGAG 2 cut(s) 974, 3118
Bpu10I CCTNAGC 1 cut(s) 1374
Bpu14I TTCGAA 1 cut(s) 489
BpuEI CTTGAG 4 cut(s) 46, 528, 635, 3076
BpuMI CCSGG 2 cut(s) 901, 2978
BsaBI GATNNNNATC 2 cut(s) 1914, 2774
BsaHI GRCGYC 1 cut(s) 1967
BsaI GGTCTC 1 cut(s) 1714
BsaJI CCNNGG 7 cut(s) 70, 155, 608, 900, 1038, 2806, 2854
BsaWI WCCGGW 1 cut(s) 769
BsaXI ACNNNNNCTCC 4 cut(s) 2677, 2707, 2892, 2922
Bsc4I CCNNNNNNNGG 9 cut(s) 156, 161, 559, 862, 2273, 2420, 2650, 2798, 2855
Bse1I ACTGG 7 cut(s) 968, 1494, 1810, 1899, 2082, 2713, 3077
Bse8I GATNNNNATC 2 cut(s) 1914, 2774
BseAI TCCGGA 1 cut(s) 769
BseBI CCWGG 9 cut(s) 610, 1293, 2114, 2233, 2651, 2720, 2807, 2919, 2991
BseDI CCNNGG 7 cut(s) 70, 155, 608, 900, 1038, 2806, 2854
BseGI GGATG 9 cut(s) 382, 506, 875, 910, 1261, 1384, 1432, 2169, 3148
BseJI GATNNNNATC 2 cut(s) 1914, 2774
BseLI CCNNNNNNNGG 9 cut(s) 156, 161, 559, 862, 2273, 2420, 2650, 2798, 2855
BseMII CTCAG 6 cut(s) 125, 209, 270, 513, 1659, 1734
BseNI ACTGG 7 cut(s) 968, 1494, 1810, 1899, 2082, 2713, 3077
BseRI GAGGAG 6 cut(s) 8, 11, 128, 1058, 1585, 2877
BseSI GKGCMC 2 cut(s) 1413, 1801
BseXI GCAGC 8 cut(s) 53, 274, 631, 860, 1078, 1966, 2343, 2728
BsgI GTGCAG 3 cut(s) 1077, 1550, 2106
Bsh1236I CGCG 1 cut(s) 2481
BshFI GGCC 6 cut(s) 899, 1799, 2790, 2811, 3023, 3175
BsiHKAI GWGCWC 3 cut(s) 1367, 1413, 2874
BsiHKCI CYCGRG 2 cut(s) 2792, 2943
BsiSI CCGG 3 cut(s) 770, 900, 2978
BslI CCNNNNNNNGG 9 cut(s) 156, 161, 559, 862, 2273, 2420, 2650, 2798, 2855
BsmAI GTCTC 6 cut(s) 125, 438, 1714, 2255, 2876, 2946
BsmBI CGTCTC 1 cut(s) 125
BsmI GAATGC 1 cut(s) 1959
BsnI GGCC 6 cut(s) 899, 1799, 2790, 2811, 3023, 3175
Bso31I GGTCTC 1 cut(s) 1714
BsoBI CYCGRG 2 cut(s) 2792, 2943
Bsp119I TTCGAA 1 cut(s) 489
Bsp120I GGGCCC 1 cut(s) 1797
Bsp1286I GDGCHC 5 cut(s) 1367, 1413, 1801, 2625, 2874
Bsp13I TCCGGA 1 cut(s) 769
Bsp19I CCATGG 2 cut(s) 70, 155
Bsp68I TCGCGA 1 cut(s) 2481
BspACI CCGC 4 cut(s) 498, 851, 2561, 2625
BspANI GGCC 6 cut(s) 899, 1799, 2790, 2811, 3023, 3175
BspCNI CTCAG 6 cut(s) 124, 208, 269, 514, 1660, 1733
BspEI TCCGGA 1 cut(s) 769
BspFNI CGCG 1 cut(s) 2481
BspLI GGNNCC 8 cut(s) 1036, 1180, 1492, 1799, 2097, 2230, 2791, 2916
BspMAI CTGCAG 3 cut(s) 1317, 1486, 1984
BspMI ACCTGC 1 cut(s) 997
BspOI GCTAGC 1 cut(s) 2741
BspPI GGATC 8 cut(s) 109, 2082, 2223, 2236, 2332, 2550, 2909, 2922
BspQI GCTCTTC 1 cut(s) 1605
BspT104I TTCGAA 1 cut(s) 489
BspTI CTTAAG 1 cut(s) 179
BspTNI GGTCTC 1 cut(s) 1714
BsrI ACTGG 7 cut(s) 968, 1494, 1810, 1899, 2082, 2713, 3077
BssECI CCNNGG 7 cut(s) 70, 155, 608, 900, 1038, 2806, 2854
BssNAI GTATAC 1 cut(s) 247
BssNI GRCGYC 1 cut(s) 1967
BssSI CACGAG 1 cut(s) 2012
BssT1I CCWWGG 3 cut(s) 70, 155, 1038
Bst1107I GTATAC 1 cut(s) 247
Bst2BI CACGAG 1 cut(s) 2012
Bst2UI CCWGG 9 cut(s) 610, 1293, 2114, 2233, 2651, 2720, 2807, 2919, 2991
Bst4CI ACNGT 7 cut(s) 1002, 1201, 1437, 1947, 2041, 2716, 3155
Bst6I CTCTTC 6 cut(s) 112, 205, 210, 696, 1605, 2962
BstACI GRCGYC 1 cut(s) 1967
BstAFI CTTAAG 1 cut(s) 179
BstBI TTCGAA 1 cut(s) 489
BstC8I GCNNGC 6 cut(s) 864, 1617, 2461, 2625, 2739, 2788
BstDSI CCRYGG 2 cut(s) 70, 155
BstENI CCTNNNNNAGG 1 cut(s) 557
BstF5I GGATG 9 cut(s) 382, 506, 875, 910, 1261, 1384, 1432, 2169, 3148
BstFNI CGCG 1 cut(s) 2481
BstH2I RGCGCY 1 cut(s) 1292
BstHHI GCGC 1 cut(s) 1291
BstMAI GTCTC 6 cut(s) 125, 438, 1714, 2255, 2876, 2946
BstMWI GCNNNNNNNGC 5 cut(s) 72, 284, 2093, 2176, 2465
BstNI CCWGG 9 cut(s) 610, 1293, 2114, 2233, 2651, 2720, 2807, 2919, 2991
BstNSI RCATGY 2 cut(s) 693, 1271
BstSFI CTRYAG 7 cut(s) 1284, 1313, 1482, 1515, 1980, 2727, 2907
BstSLI GKGCMC 2 cut(s) 1413, 1801
BstUI CGCG 1 cut(s) 2481
BstV1I GCAGC 8 cut(s) 53, 274, 631, 860, 1078, 1966, 2343, 2728
BstV2I GAAGAC 2 cut(s) 31, 2541
BstX2I RGATCY 6 cut(s) 114, 173, 1735, 2228, 2246, 2914
BstYI RGATCY 6 cut(s) 114, 173, 1735, 2228, 2246, 2914
BstZ17I GTATAC 1 cut(s) 247
BsuI GTATCC 3 cut(s) 55, 2379, 3080
BsuRI GGCC 6 cut(s) 899, 1799, 2790, 2811, 3023, 3175
BtgI CCRYGG 2 cut(s) 70, 155
BtrI CACGTC 1 cut(s) 133
BtsCI GGATG 9 cut(s) 382, 506, 875, 910, 1261, 1384, 1432, 2169, 3148
BtsIMutI CAGTG 5 cut(s) 512, 1501, 1892, 2089, 3160
BtuMI TCGCGA 1 cut(s) 2481
BveI ACCTGC 1 cut(s) 997
Cac8I GCNNGC 6 cut(s) 864, 1617, 2461, 2625, 2739, 2788
CfoI GCGC 1 cut(s) 1291
CseI GACGC 2 cut(s) 22, 1975
CsiI ACCWGGT 1 cut(s) 2649
Csp6I GTAC 3 cut(s) 313, 2046, 3070
CspCI CAANNNNNGTGG 4 cut(s) 559, 594, 2520, 2555
CviQI GTAC 3 cut(s) 313, 2046, 3070
DraI TTTAAA 1 cut(s) 924
DraIII CACNNNGTG 1 cut(s) 2017
DrdI GACNNNNNNGTC 1 cut(s) 2123
DriI GACNNNNNGTC 1 cut(s) 976
DseDI GACNNNNNNGTC 1 cut(s) 2123
Eam1104I CTCTTC 6 cut(s) 112, 205, 210, 696, 1605, 2962
Eam1105I GACNNNNNGTC 1 cut(s) 976
EarI CTCTTC 6 cut(s) 112, 205, 210, 696, 1605, 2962
Ecl136II GAGCTC 2 cut(s) 1365, 2872
Eco130I CCWWGG 3 cut(s) 70, 155, 1038
Eco24I GRGCYC 4 cut(s) 1367, 1801, 2625, 2874
Eco31I GGTCTC 1 cut(s) 1714
Eco32I GATATC 1 cut(s) 1916
Eco47I GGWCC 5 cut(s) 853, 970, 1035, 1179, 2903
Eco53kI GAGCTC 2 cut(s) 1365, 2872
Eco57I CTGAAG 5 cut(s) 426, 548, 842, 1063, 1575
Eco88I CYCGRG 2 cut(s) 2792, 2943
EcoICRI GAGCTC 2 cut(s) 1365, 2872
EcoNI CCTNNNNNAGG 1 cut(s) 557
EcoO109I RGGNCCY 5 cut(s) 1035, 1797, 1798, 2789, 2903
EcoRII CCWGG 9 cut(s) 608, 1291, 2112, 2231, 2649, 2718, 2805, 2917, 2989
EcoRV GATATC 1 cut(s) 1916
EcoT14I CCWWGG 3 cut(s) 70, 155, 1038
EcoT22I ATGCAT 1 cut(s) 2071
EcoT38I GRGCYC 4 cut(s) 1367, 1801, 2625, 2874
ErhI CCWWGG 3 cut(s) 70, 155, 1038
Esp3I CGTCTC 1 cut(s) 125
FalI AAGNNNNNCTT 4 cut(s) 441, 473, 537, 569
FauI CCCGC 1 cut(s) 2632
FauNDI CATATG 1 cut(s) 2416
FbaI TGATCA 4 cut(s) 792, 1165, 2775, 2971
FblI GTMKAC 2 cut(s) 246, 1899
Fnu4HI GCNGC 8 cut(s) 67, 288, 645, 849, 1092, 1980, 2332, 2742
FokI GGATG 9 cut(s) 369, 513, 882, 917, 1268, 1391, 1439, 2176, 3155
FriOI GRGCYC 4 cut(s) 1367, 1801, 2625, 2874
Fsp4HI GCNGC 8 cut(s) 67, 288, 645, 849, 1092, 1980, 2332, 2742
GlaI GCGC 1 cut(s) 1290
GluI GCNGC 8 cut(s) 67, 288, 645, 849, 1092, 1980, 2332, 2742
GsuI CTGGAG 2 cut(s) 974, 3118
HaeII RGCGCY 1 cut(s) 1292
HaeIII GGCC 6 cut(s) 899, 1799, 2790, 2811, 3023, 3175
HapII CCGG 3 cut(s) 770, 900, 2978
HgaI GACGC 2 cut(s) 22, 1975
HhaI GCGC 1 cut(s) 1291
Hin1I GRCGYC 1 cut(s) 1967
Hin6I GCGC 1 cut(s) 1289
HinP1I GCGC 1 cut(s) 1289
HincII GTYRAC 1 cut(s) 1900
HindII GTYRAC 1 cut(s) 1900
HpaII CCGG 3 cut(s) 770, 900, 2978
HphI GGTGA 8 cut(s) 139, 176, 1502, 1820, 2597, 2870, 2966, 2979
Hpy99I CGWCG 2 cut(s) 16, 3030
HpyCH4III ACNGT 7 cut(s) 1002, 1201, 1437, 1947, 2041, 2716, 3155
HpyCH4IV ACGT 3 cut(s) 132, 2118, 2318
HpyF10VI GCNNNNNNNGC 5 cut(s) 72, 284, 2093, 2176, 2465
HpySE526I ACGT 3 cut(s) 132, 2118, 2318
Hsp92I GRCGYC 1 cut(s) 1967
HspAI GCGC 1 cut(s) 1289
Kpn2I TCCGGA 1 cut(s) 769
Ksp22I TGATCA 4 cut(s) 792, 1165, 2775, 2971
LguI GCTCTTC 1 cut(s) 1605
LmnI GCTCC 5 cut(s) 21, 94, 2101, 2167, 2698
Lsp1109I GCAGC 8 cut(s) 53, 274, 631, 860, 1078, 1966, 2343, 2728
LweI GCATC 2 cut(s) 1417, 1765
MabI ACCWGGT 1 cut(s) 2649
MaeII ACGT 3 cut(s) 132, 2118, 2318
MfeI CAATTG 1 cut(s) 1368
MflI RGATCY 6 cut(s) 114, 173, 1735, 2228, 2246, 2914
MhlI GDGCHC 5 cut(s) 1367, 1413, 1801, 2625, 2874
MlyI GAGTC 8 cut(s) 176, 576, 986, 1548, 2435, 2487, 2878, 2948
Mph1103I ATGCAT 1 cut(s) 2071
MroI TCCGGA 1 cut(s) 769
MroXI GAANNNNTTC 2 cut(s) 452, 2843
MslI CAYNNNNRTG 1 cut(s) 324
MspA1I CMGCKG 3 cut(s) 851, 862, 2627
MspCI CTTAAG 1 cut(s) 179
MspI CCGG 3 cut(s) 770, 900, 2978
MunI CAATTG 1 cut(s) 1368
Mva1269I GAATGC 1 cut(s) 1959
MvaI CCWGG 9 cut(s) 610, 1293, 2114, 2233, 2651, 2720, 2807, 2919, 2991
MvnI CGCG 1 cut(s) 2481
MwoI GCNNNNNNNGC 5 cut(s) 72, 284, 2093, 2176, 2465
NciI CCSGG 2 cut(s) 901, 2978
NcoI CCATGG 2 cut(s) 70, 155
NdeI CATATG 1 cut(s) 2416
NheI GCTAGC 1 cut(s) 2737
NlaIV GGNNCC 8 cut(s) 1036, 1180, 1492, 1799, 2097, 2230, 2791, 2916
NmeAIII GCCGAG 2 cut(s) 2419, 2893
NmuCI GTSAC 7 cut(s) 145, 1437, 1890, 2035, 2407, 2575, 3155
NruI TCGCGA 1 cut(s) 2481
NsiI ATGCAT 1 cut(s) 2071
NspI RCATGY 2 cut(s) 693, 1271
NspV TTCGAA 1 cut(s) 489
OliI CACNNNNGTG 1 cut(s) 324
PciI ACATGT 2 cut(s) 689, 1267
PciSI GCTCTTC 1 cut(s) 1605
PctI GAATGC 1 cut(s) 1959
PdmI GAANNNNTTC 2 cut(s) 452, 2843
PflFI GACNNNGTC 1 cut(s) 2651
PflMI CCANNNNNTGG 3 cut(s) 156, 161, 2273
PfoI TCCNGGA 2 cut(s) 2231, 2917
PkrI GCNGC 8 cut(s) 68, 289, 646, 850, 1093, 1981, 2333, 2743
PleI GAGTC 8 cut(s) 175, 576, 985, 1547, 2434, 2487, 2878, 2948
PpsI GAGTC 8 cut(s) 175, 576, 985, 1547, 2434, 2487, 2878, 2948
PpuMI RGGWCCY 2 cut(s) 1035, 2903
PscI ACATGT 2 cut(s) 689, 1267
Psp124BI GAGCTC 2 cut(s) 1367, 2874
Psp5II RGGWCCY 2 cut(s) 1035, 2903
Psp6I CCWGG 9 cut(s) 608, 1291, 2112, 2231, 2649, 2718, 2805, 2917, 2989
PspGI CCWGG 9 cut(s) 608, 1291, 2112, 2231, 2649, 2718, 2805, 2917, 2989
PspN4I GGNNCC 8 cut(s) 1036, 1180, 1492, 1799, 2097, 2230, 2791, 2916
PspOMI GGGCCC 1 cut(s) 1797
PspPPI RGGWCCY 2 cut(s) 1035, 2903
PstI CTGCAG 3 cut(s) 1317, 1486, 1984
PsuI RGATCY 6 cut(s) 114, 173, 1735, 2228, 2246, 2914
PsyI GACNNNGTC 1 cut(s) 2651
PvuII CAGCTG 1 cut(s) 862
RruI TCGCGA 1 cut(s) 2481
RsaI GTAC 3 cut(s) 314, 2047, 3071
RsaNI GTAC 3 cut(s) 313, 2046, 3070
RseI CAYNNNNRTG 1 cut(s) 324
SacI GAGCTC 2 cut(s) 1367, 2874
SalI GTCGAC 1 cut(s) 1898
SapI GCTCTTC 1 cut(s) 1605
SatI GCNGC 8 cut(s) 67, 288, 645, 849, 1092, 1980, 2332, 2742
SbfI CCTGCAGG 1 cut(s) 1317
ScaI AGTACT 1 cut(s) 3071
SchI GAGTC 8 cut(s) 176, 576, 986, 1548, 2435, 2487, 2878, 2948
SdaI CCTGCAGG 1 cut(s) 1317
SduI GDGCHC 5 cut(s) 1367, 1413, 1801, 2625, 2874
SexAI ACCWGGT 1 cut(s) 2649
SfaNI GCATC 2 cut(s) 1417, 1765
SfcI CTRYAG 7 cut(s) 1284, 1313, 1482, 1515, 1980, 2727, 2907
SfuI TTCGAA 1 cut(s) 489
SinI GGWCC 5 cut(s) 853, 970, 1035, 1179, 2903
SmiMI CAYNNNNRTG 1 cut(s) 324
SmlI CTYRAG 5 cut(s) 61, 179, 543, 614, 3091
SmoI CTYRAG 5 cut(s) 61, 179, 543, 614, 3091
Sse8387I CCTGCAGG 1 cut(s) 1317
SsiI CCGC 4 cut(s) 498, 851, 2561, 2625
SstI GAGCTC 2 cut(s) 1367, 2874
StyI CCWWGG 3 cut(s) 70, 155, 1038
TaaI ACNGT 7 cut(s) 1002, 1201, 1437, 1947, 2041, 2716, 3155
TaiI ACGT 3 cut(s) 135, 2121, 2321
TaqI TCGA 5 cut(s) 362, 489, 1227, 1899, 3028
TaqII GACCGA 1 cut(s) 3116
TatI WGTACW 2 cut(s) 312, 3069
TscAI CASTG 5 cut(s) 519, 1501, 1899, 2089, 3160
TseFI GTSAC 7 cut(s) 145, 1437, 1890, 2035, 2407, 2575, 3155
TseI GCWGC 8 cut(s) 66, 287, 644, 848, 1091, 1979, 2331, 2741
Tsp45I GTSAC 7 cut(s) 145, 1437, 1890, 2035, 2407, 2575, 3155
TspGWI ACGGA 5 cut(s) 107, 107, 1171, 1379, 2842
TspRI CASTG 5 cut(s) 519, 1501, 1899, 2089, 3160
Tth111I GACNNNGTC 1 cut(s) 2651
Van91I CCANNNNNTGG 3 cut(s) 156, 161, 2273
Vha464I CTTAAG 1 cut(s) 179
VneI GTGCAC 1 cut(s) 1409
VpaK11BI GGWCC 5 cut(s) 853, 970, 1035, 1179, 2903
XagI CCTNNNNNAGG 1 cut(s) 557
XapI RAATTY 4 cut(s) 491, 782, 1500, 1748
XbaI TCTAGA 2 cut(s) 2510, 3047
XceI RCATGY 2 cut(s) 693, 1271
XcmI CCANNNNNNNNNTGG 3 cut(s) 593, 2705, 3069
XmiI GTMKAC 2 cut(s) 246, 1899
XmnI GAANNNNTTC 2 cut(s) 452, 2843
ZrmI AGTACT 1 cut(s) 3071
Zsp2I ATGCAT 1 cut(s) 2071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.