Rw4G037040

Uncharacterized ACR, COG1678

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0009991
Physical Location & Seq
Reverse (-)
63769594 .. 63774796
5203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G037040.1

Sequence Viewer

Length: 3294 bp
ATGCCGACGACAAACATGGTGCTCCTGGCGTGCTTGGTGTCGCTGGTGGCAGCAATCGCCGCCGTTGATTCAAAATCAGACAGCTCCGGCGAGTGGCACATCCTCACGAAGCAGAACTTCTCGTCTCAGATCCGTCTCCATCCTCACATCCTCCTCTTCGTCACTCTTCCATGGTCCGGTGAGTGTCGATCACTCATGAGAGACGTGGCGAAGTTGGTCACTGATAGACCTGAAGAGTTCAGCTCGCTGAAGCTGATGGTGTTGCACAGAAATACAGAGAAGATGGTGGCAACTGCGATCGGTGCCGCTTCAGAATGGGAGGAAATTACGGTTTTGTACTATCACCATTCTGTTTCGTACAAATATGGAGGGAGGCTTCGAGCGCAGAACATTTTGAGTTCAATTCGTCCCTATGTGTCGGCTTTAGGTGAAGAACTTCCATTCAAATCGCTGAAGAGTCAGGAAGAGTTGAAAGCTTTCGTTGATTCAACTGACAAAGCTTTGGTCGTGTTTGAGTTTTGTGAATGGACTCCTAAATTGGTGGCCAAGAGGAAGATGAATGGGACTGATCACAGTGGCTTTGGGGAATTTTTTGGGTTAAACTTGAATGCAGAGACAAATAGAACCGACTGGCGGAAGAATAACCAGAAGGGTATGGAAACTGCAAAGATGAAGTGTAATGTTGATAATGAGCTTGGTGCAGTTCCTTGGGTTGGGGACTTCAGCTCAGTAAATGACAGTGCTGCTTCTGAAGAGACTGAGAACAGTTGGCCCGATGGTGCATCGTTTTGCACACTTGAAGAATATCAGTTGTTTGACTTTTTCTTCTCAAAGTTCATGACTATTGCAAGAGAGTTCGTTCTGCCTCCTGAAAGGCATAAATTTGGTTTGGTCTCAGAAAGATCTATGCTCTCAGCTCTTGGTATTGGAGATTCCAGTTCGTGGTTGGCAGTGCTATACTTTGCTGGATGTCCCAGTTGTTCGAAGATTATTAAAAAAGAGGATGACCTTAATAATGCTTTAAAGATGGATAGTTTTGTTAAGGAGCTAGAGGGTCATGGCAACGCTTTGGAGCCTGCTTTGCCTGCAAACCAGCCATCAGTTCTCTTATTTGTGGATAGATCATCTGACTTGTTAGAGACTAGAATCAATGGCAAGGAAGCTCTTGATGCTTTTTGGAAGCTGGCACTGCACTATCACATGCCTGACCAGATTGGCAGTCAAAGTAAAGACAAGCATGAGAAATCCTCATCCCAGCATTATCGAGCATTAAGGACCACATCTGGACATCCTAACTTAAAATTATCTCAGACAGTGCAGTTTAGCAAACTAGAAGACAAGATGTCTACTTTCACAATTATAAATGAGGACAAACAATTCAGAGTGGAGAAGTTGGCTTTGGATCTAAAGGGTAATTCCTTGCAGGATATTTTGGAAATTGTACTTAAGCAAAAGAAGAAAGCTAAGTTAAGCTCACTGGTGAAGGATTTGGGTTTCCAACTTTTGTCAGCTGATATGGACATCAAACCAGAGAGTACATTGCCATTACCGAAGGAATCTGAATCTGATACAGTTACAGAAGAGCCATATAAGGAGGGCCTTGCTACAAGTAGTACTGACTCAGACAGAGATCAACAGCCAGATGCAACAAGTATATCTACCGAACAGCATCCAGAAACTTCTGAAGTCATGGATACTGAAACGTCATCTCAGAACAATGAAGAAAAAACAGATTATGTTGATACAAGCAATCAGATCTTATCTGTCGATAGTGAGCAACAGCTTGCAGATCATAAATGTGAAGATTTAGATACAGAAGATAGTAATCCACAGGGCGAAAAGTCAGCAGAGCAGCAGCTTCACTTTCAAGGCTTTAAGGGTTCATTTTTCTTTTCTGATGGTAATTGTCGGTTGCTTCGAGCGCTGACTGGCAGTTCAAAATTTCCAGCCCTGGTAATAGTTGATCCCAATATGCAGCAGCATTATGTCTTCCCAGAGGAGACTAATGTCAATTATTCTACACTGGTTGATTTTGTTTCCGCCTTTCTTAATGGAAGTCTTCTTCCATATCAACAGTCTGAAACTGTACTTGAAAGCTCTAGGAAAGCCACTCAACCACCATTTGTTAATCTGGACTTCCATCAGGTGGATTCTATCCCTCGAGTAACAACTCACACTTTCTCTGAGCTGGTTGTTGGGTTCAATCAATCTGACAGTGAGGCTTGGAATAAGGATGTCTTAGTTCTTTTTAGCAATAGATGGTGTGGTTTTTGCCAGCGAATGGAGTTAGTTGTTCATGAAGTATACCGAGCTATGAAGGATTATGCTAAGATGCTGAAAAGGGAATCAAAGAATGACAAATCAACGTTTCACGATAATATGACGGGCGACGTGAAAAATGAAATGCTGGAGCTGCCATTAATGTACTTGCTGGATTGCACATTGAATGATTGCAGTTTGATACTGAAATCGATGAATCAGAGGGAGGTTTATCCTACTCTGGTGCTCTTTCCAGCAGAAAAGAAGCATGCTCTTCCTTATGAAGGAGATATGGCAGTCACTGAGATTTTCAATTTCATGGCTGATCATGGAAGTAACTCTCATCATCTTACCAGTGAAAAAGGAATGTTGTGGACTTTAGCTGAAAAGAGAGGAAGAAATCAAGATTTCTTTATGGTTCAGTCATCTGACGTTCATGAGCAGTCTAAGGACAGGCTTCATGAAGTCCTATTAACAAATGTTCATAAACCAGTAATTGAAGACAAGCAGATCAAGTCTCACATACCCCAAGGCTTGCATGAAGCACCCCCGAATGTGGTGGTTGGTTCTGTCCTAGTTGCTACTGATAAACTTCATAGCGTACACCCCTTTGATAAATCAGAGATTCTCATTGTGAAGGCAGATCAAACTACTGGATTTCAAGGTTTAATTATCAACAAGCATATCAGATGGGATGCTCTGCCTGAATTGGGAGAAGGAGTTAAGATGTTAGTAGAAGCCCCTTTGTCCTTTGGAGGACCGCTTATAAAGGGTGGAATGCCTCTTGTCGCGTTAACTCAAAAATTTGTCAAGGATGAATATCCGGAAATCTTACCAGGCATTGCATTTCTTGATCCATCAGCAACAATTCAAAAAATCAAAGAGCTCAAGTTAGGAAATCAATCTGTCACTGACTACTGGTTTTTCTTTGGGTATTCAAGTTGGGGTTGGGACCAGCTCTTTGGTGAGATTGATAAAGGAGCTTGGAATTTAAGTGATGATGGTATGAGACATTTAGATTGGCCATCAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF179 Thioredoxin

Protein Analysis

1097

Amino Acids

123.65

Weight (kDa)

5.28

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF179 PF02622 957 - 1086 7.1e-11 AlgH-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1361, 3026
AccB1I GGYRCC 1 cut(s) 302
AccB7I CCANNNNNTGG 3 cut(s) 942, 2146, 2281
AccI GTMKAC 2 cut(s) 1346, 2304
AccII CGCG 1 cut(s) 3050
AccIII TCCGGA 1 cut(s) 3082
AciI CCGC 5 cut(s) 60, 306, 634, 2040, 3020
AclI AACGTT 1 cut(s) 2366
AclWI GGATC 4 cut(s) 124, 1410, 1958, 3107
AcoI YGGCCR 2 cut(s) 543, 3281
AcsI RAATTY 5 cut(s) 587, 881, 1940, 3062, 3247
AcuI CTGAAG 7 cut(s) 252, 269, 294, 473, 706, 771, 1704
AfaI GTAC 8 cut(s) 338, 359, 1443, 1537, 1615, 2088, 2426, 2862
AfeI AGCGCT 1 cut(s) 1923
AflII CTTAAG 1 cut(s) 1445
AhdI GACNNNNNGTC 1 cut(s) 1342
AjiI CACGTC 2 cut(s) 205, 2392
AjnI CCWGG 3 cut(s) 24, 1950, 3094
AjuI GAANNNNNNNTTGG 2 cut(s) 1382, 1414
Alw21I GWGCWC 3 cut(s) 24, 2508, 3147
AlwI GGATC 4 cut(s) 124, 1410, 1958, 3107
AlwNI CAGNNNCTG 1 cut(s) 2561
Ama87I CYCGRG 1 cut(s) 2160
Aor13HI TCCGGA 1 cut(s) 3082
Aor51HI AGCGCT 1 cut(s) 1923
AoxI GGCC 4 cut(s) 543, 770, 1597, 3281
ApeKI GCWGC 7 cut(s) 50, 743, 1852, 1855, 1975, 1978, 2413
ApoI RAATTY 5 cut(s) 587, 881, 1940, 3062, 3247
ArsI GACNNNNNNTTYG 4 cut(s) 489, 521, 3203, 3235
AseI ATTAAT 1 cut(s) 2420
Asp700I GAANNNNTTC 2 cut(s) 435, 476
AspLEI GCGC 2 cut(s) 385, 1924
AspS9I GGNCC 6 cut(s) 174, 771, 1275, 1597, 3017, 3211
AsuHPI GGTGA 5 cut(s) 191, 335, 440, 1492, 3236
AsuII TTCGAA 1 cut(s) 983
AvaI CYCGRG 1 cut(s) 2160
AvaII GGWCC 4 cut(s) 174, 1275, 3017, 3211
BalI TGGCCA 2 cut(s) 545, 3283
BanI GGYRCC 1 cut(s) 302
BanII GRGCYC 1 cut(s) 3147
BbsI GAAGAC 4 cut(s) 1341, 1981, 2051, 2766
Bbv12I GWGCWC 3 cut(s) 24, 2508, 3147
BbvI GCAGC 7 cut(s) 62, 730, 1864, 1867, 1987, 1990, 2400
BceAI ACGGC 1 cut(s) 47
BciT130I CCWGG 3 cut(s) 26, 1952, 3096
BciVI GTATCC 1 cut(s) 1687
BclI TGATCA 2 cut(s) 568, 2584
BfaI CTAG 5 cut(s) 1049, 1143, 1331, 2100, 2834
BfoI RGCGCY 1 cut(s) 1925
BfrI CTTAAG 1 cut(s) 1445
BfuI GTATCC 1 cut(s) 1687
BglII AGATCT 2 cut(s) 902, 1755
BisI GCNGC 9 cut(s) 51, 60, 306, 744, 1853, 1856, 1976, 1979, 2414
BlsI GCNGC 9 cut(s) 52, 61, 307, 745, 1854, 1857, 1977, 1980, 2415
BmcAI AGTACT 1 cut(s) 1615
Bme1390I CCNGG 3 cut(s) 26, 1952, 3096
Bme18I GGWCC 4 cut(s) 174, 1275, 3017, 3211
BmeRI GACNNNNNGTC 1 cut(s) 1342
BmeT110I CYCGRG 1 cut(s) 2160
BmgBI CACGTC 2 cut(s) 205, 2392
BmgT120I GGNCC 6 cut(s) 174, 771, 1275, 1597, 3017, 3211
BmiI GGNNCC 3 cut(s) 304, 1074, 3212
BmrFI CCNGG 3 cut(s) 26, 1952, 3096
BmrI ACTGGG 1 cut(s) 969
BmsI GCATC 6 cut(s) 791, 1159, 1633, 1678, 2322, 2944
BmuI ACTGGG 1 cut(s) 969
BoxI GACNNNNGTC 1 cut(s) 2006
BpiI GAAGAC 4 cut(s) 1341, 1981, 2051, 2766
BplI GAGNNNNNCTC 4 cut(s) 227, 259, 1232, 1264
BpmI CTGGAG 1 cut(s) 2429
Bpu14I TTCGAA 1 cut(s) 983
BpuEI CTTGAG 1 cut(s) 3131
Bsa29I ATCGAT 1 cut(s) 2471
BsaBI GATNNNNATC 2 cut(s) 1824, 3078
BsaI GGTCTC 1 cut(s) 898
BsaJI CCNNGG 4 cut(s) 170, 707, 1950, 2788
BsaWI WCCGGW 2 cut(s) 176, 3082
BsaXI ACNNNNNCTCC 2 cut(s) 2964, 2994
Bse3DI GCAATG 2 cut(s) 1538, 3099
Bse8I GATNNNNATC 2 cut(s) 1824, 3078
BseAI TCCGGA 1 cut(s) 3082
BseBI CCWGG 3 cut(s) 26, 1952, 3096
BseCI ATCGAT 1 cut(s) 2471
BseDI CCNNGG 4 cut(s) 170, 707, 1950, 2788
BseJI GATNNNNATC 2 cut(s) 1824, 3078
BseMI GCAATG 2 cut(s) 1538, 3099
BseRI GAGGAG 2 cut(s) 143, 2012
BseXI GCAGC 7 cut(s) 62, 730, 1864, 1867, 1987, 1990, 2400
BseYI CCCAGC 1 cut(s) 1254
BsgI GTGCAG 3 cut(s) 720, 1175, 1337
Bsh1236I CGCG 1 cut(s) 3050
Bsh1285I CGRYCG 1 cut(s) 300
BshFI GGCC 4 cut(s) 545, 772, 1599, 3283
BshNI GGYRCC 1 cut(s) 302
BshVI ATCGAT 1 cut(s) 2471
BsiEI CGRYCG 1 cut(s) 300
BsiHKAI GWGCWC 3 cut(s) 24, 2508, 3147
BsiHKCI CYCGRG 1 cut(s) 2160
BsiSI CCGG 3 cut(s) 87, 177, 3083
BslFI GGGAC 5 cut(s) 393, 577, 731, 957, 3224
BsmBI CGTCTC 3 cut(s) 129, 140, 195
BsmFI GGGAC 5 cut(s) 393, 577, 731, 957, 3224
BsmI GAATGC 2 cut(s) 613, 3042
BsnI GGCC 4 cut(s) 545, 772, 1599, 3283
Bso31I GGTCTC 1 cut(s) 898
BsoBI CYCGRG 1 cut(s) 2160
Bsp119I TTCGAA 1 cut(s) 983
Bsp1286I GDGCHC 3 cut(s) 24, 2508, 3147
Bsp13I TCCGGA 1 cut(s) 3082
Bsp19I CCATGG 1 cut(s) 170
BspACI CCGC 5 cut(s) 60, 306, 634, 2040, 3020
BspANI GGCC 4 cut(s) 545, 772, 1599, 3283
BspDI ATCGAT 1 cut(s) 2471
BspEI TCCGGA 1 cut(s) 3082
BspFNI CGCG 1 cut(s) 3050
BspHI TCATGA 5 cut(s) 195, 837, 2296, 2695, 2719
BspLI GGNNCC 3 cut(s) 304, 1074, 3212
BspPI GGATC 4 cut(s) 124, 1410, 1958, 3107
BspQI GCTCTTC 2 cut(s) 1575, 2538
BspT104I TTCGAA 1 cut(s) 983
BspT107I GGYRCC 1 cut(s) 302
BspTI CTTAAG 1 cut(s) 1445
BspTNI GGTCTC 1 cut(s) 898
BsrDI GCAATG 2 cut(s) 1538, 3099
BssECI CCNNGG 4 cut(s) 170, 707, 1950, 2788
BssNAI GTATAC 1 cut(s) 2305
BssT1I CCWWGG 3 cut(s) 170, 707, 2788
Bst1107I GTATAC 1 cut(s) 2305
Bst2UI CCWGG 3 cut(s) 26, 1952, 3096
Bst4CI ACNGT 9 cut(s) 331, 575, 740, 767, 1315, 1573, 2076, 2086, 2216
Bst6I CTCTTC 8 cut(s) 161, 171, 228, 449, 459, 747, 1575, 2538
BstAFI CTTAAG 1 cut(s) 1445
BstBI TTCGAA 1 cut(s) 983
BstC8I GCNNGC 9 cut(s) 31, 245, 1077, 1086, 1185, 1785, 2276, 2529, 2795
BstDSI CCRYGG 1 cut(s) 170
BstENI CCTNNNNNAGG 1 cut(s) 2541
BstFNI CGCG 1 cut(s) 3050
BstH2I RGCGCY 1 cut(s) 1925
BstHHI GCGC 2 cut(s) 385, 1924
BstMCI CGRYCG 1 cut(s) 300
BstNI CCWGG 3 cut(s) 26, 1952, 3096
BstNSI RCATGY 2 cut(s) 1204, 2531
BstPAI GACNNNNGTC 1 cut(s) 2006
BstSCI CCNGG 3 cut(s) 24, 1950, 3094
BstUI CGCG 1 cut(s) 3050
BstV1I GCAGC 7 cut(s) 62, 730, 1864, 1867, 1987, 1990, 2400
BstV2I GAAGAC 4 cut(s) 1341, 1981, 2051, 2766
BstX2I RGATCY 4 cut(s) 129, 902, 1402, 1755
BstXI CCANNNNNNTGG 1 cut(s) 3221
BstYI RGATCY 4 cut(s) 129, 902, 1402, 1755
BstZ17I GTATAC 1 cut(s) 2305
Bsu15I ATCGAT 1 cut(s) 2471
BsuI GTATCC 1 cut(s) 1687
BsuRI GGCC 4 cut(s) 545, 772, 1599, 3283
BsuTUI ATCGAT 1 cut(s) 2471
BtgI CCRYGG 1 cut(s) 170
BtrI CACGTC 2 cut(s) 205, 2392
BtsI GCAGTG 2 cut(s) 957, 1187
Cac8I GCNNGC 9 cut(s) 31, 245, 1077, 1086, 1185, 1785, 2276, 2529, 2795
CaiI CAGNNNCTG 1 cut(s) 2561
CciI TCATGA 5 cut(s) 195, 837, 2296, 2695, 2719
CfoI GCGC 2 cut(s) 385, 1924
Cfr13I GGNCC 6 cut(s) 174, 771, 1275, 1597, 3017, 3211
ClaI ATCGAT 1 cut(s) 2471
Csp6I GTAC 8 cut(s) 337, 358, 1442, 1536, 1614, 2087, 2425, 2861
CviQI GTAC 8 cut(s) 337, 358, 1442, 1536, 1614, 2087, 2425, 2861
DraI TTTAAA 1 cut(s) 1023
DriI GACNNNNNGTC 1 cut(s) 1342
EaeI YGGCCR 2 cut(s) 543, 3281
Eam1104I CTCTTC 8 cut(s) 161, 171, 228, 449, 459, 747, 1575, 2538
Eam1105I GACNNNNNGTC 1 cut(s) 1342
EarI CTCTTC 8 cut(s) 161, 171, 228, 449, 459, 747, 1575, 2538
EciI GGCGGA 2 cut(s) 649, 2029
Ecl136II GAGCTC 1 cut(s) 3145
Eco130I CCWWGG 3 cut(s) 170, 707, 2788
Eco24I GRGCYC 1 cut(s) 3147
Eco31I GGTCTC 1 cut(s) 898
Eco47I GGWCC 4 cut(s) 174, 1275, 3017, 3211
Eco47III AGCGCT 1 cut(s) 1923
Eco53kI GAGCTC 1 cut(s) 3145
Eco57I CTGAAG 7 cut(s) 252, 269, 294, 473, 706, 771, 1704
Eco88I CYCGRG 1 cut(s) 2160
EcoICRI GAGCTC 1 cut(s) 3145
EcoNI CCTNNNNNAGG 1 cut(s) 2541
EcoO109I RGGNCCY 1 cut(s) 1597
EcoRII CCWGG 3 cut(s) 24, 1950, 3094
EcoT14I CCWWGG 3 cut(s) 170, 707, 2788
EcoT38I GRGCYC 1 cut(s) 3147
ErhI CCWWGG 3 cut(s) 170, 707, 2788
Esp3I CGTCTC 3 cut(s) 129, 140, 195
FalI AAGNNNNNCTT 4 cut(s) 101, 133, 2222, 2254
FaqI GGGAC 5 cut(s) 393, 577, 731, 957, 3224
FbaI TGATCA 2 cut(s) 568, 2584
FblI GTMKAC 2 cut(s) 1346, 2304
Fnu4HI GCNGC 9 cut(s) 51, 60, 306, 744, 1853, 1856, 1976, 1979, 2414
FriOI GRGCYC 1 cut(s) 3147
Fsp4HI GCNGC 9 cut(s) 51, 60, 306, 744, 1853, 1856, 1976, 1979, 2414
FspBI CTAG 5 cut(s) 1049, 1143, 1331, 2100, 2834
GlaI GCGC 2 cut(s) 384, 1923
GluI GCNGC 9 cut(s) 51, 60, 306, 744, 1853, 1856, 1976, 1979, 2414
GsaI CCCAGC 1 cut(s) 1258
GsuI CTGGAG 1 cut(s) 2429
HaeII RGCGCY 1 cut(s) 1925
HaeIII GGCC 4 cut(s) 545, 772, 1599, 3283
HapII CCGG 3 cut(s) 87, 177, 3083
HhaI GCGC 2 cut(s) 385, 1924
Hin6I GCGC 2 cut(s) 383, 1922
HinP1I GCGC 2 cut(s) 383, 1922
HincII GTYRAC 1 cut(s) 3054
HindII GTYRAC 1 cut(s) 3054
HindIII AAGCTT 2 cut(s) 474, 498
HpaI GTTAAC 1 cut(s) 3054
HpaII CCGG 3 cut(s) 87, 177, 3083
HphI GGTGA 5 cut(s) 191, 335, 440, 1492, 3236
Hpy166II GTNNAC 5 cut(s) 1347, 2305, 2634, 2863, 3054
Hpy8I GTNNAC 5 cut(s) 1347, 2305, 2634, 2863, 3054
Hpy99I CGWCG 2 cut(s) 10, 2393
HpyAV CCTTC 7 cut(s) 643, 1477, 1546, 2311, 2537, 2890, 2969
HpyCH4III ACNGT 9 cut(s) 331, 575, 740, 767, 1315, 1573, 2076, 2086, 2216
HpyCH4IV ACGT 5 cut(s) 204, 1703, 2366, 2391, 2691
HpySE526I ACGT 5 cut(s) 204, 1703, 2366, 2391, 2691
HspAI GCGC 2 cut(s) 383, 1922
Kpn2I TCCGGA 1 cut(s) 3082
Ksp22I TGATCA 2 cut(s) 568, 2584
KspAI GTTAAC 1 cut(s) 3054
LguI GCTCTTC 2 cut(s) 1575, 2538
LmnI GCTCC 6 cut(s) 27, 89, 1045, 1072, 2410, 3239
Lsp1109I GCAGC 7 cut(s) 62, 730, 1864, 1867, 1987, 1990, 2400
LweI GCATC 6 cut(s) 791, 1159, 1633, 1678, 2322, 2944
MaeI CTAG 5 cut(s) 1049, 1143, 1331, 2100, 2834
MaeII ACGT 5 cut(s) 204, 1703, 2366, 2391, 2691
MaeIII GTNAC 7 cut(s) 160, 217, 1573, 2164, 2557, 2594, 3166
MflI RGATCY 4 cut(s) 129, 902, 1402, 1755
MhlI GDGCHC 3 cut(s) 24, 2508, 3147
MlsI TGGCCA 2 cut(s) 545, 3283
MluNI TGGCCA 2 cut(s) 545, 3283
MlyI GAGTC 3 cut(s) 466, 523, 1613
MmeI TCCRAC 1 cut(s) 1522
Mox20I TGGCCA 2 cut(s) 545, 3283
MroI TCCGGA 1 cut(s) 3082
MroXI GAANNNNTTC 2 cut(s) 435, 476
MscI TGGCCA 2 cut(s) 545, 3283
MslI CAYNNNNRTG 1 cut(s) 1797
Msp20I TGGCCA 2 cut(s) 545, 3283
MspA1I CMGCKG 1 cut(s) 1511
MspCI CTTAAG 1 cut(s) 1445
MspI CCGG 3 cut(s) 87, 177, 3083
MspR9I CCNGG 3 cut(s) 26, 1952, 3096
Mva1269I GAATGC 2 cut(s) 613, 3042
MvaI CCWGG 3 cut(s) 26, 1952, 3096
MvnI CGCG 1 cut(s) 3050
NcoI CCATGG 1 cut(s) 170
NlaIV GGNNCC 3 cut(s) 304, 1074, 3212
NmuCI GTSAC 4 cut(s) 160, 217, 2557, 3166
NspI RCATGY 2 cut(s) 1204, 2531
NspV TTCGAA 1 cut(s) 983
PaeI GCATGC 1 cut(s) 2531
PaeR7I CTCGAG 1 cut(s) 2160
PagI TCATGA 5 cut(s) 195, 837, 2296, 2695, 2719
PciSI GCTCTTC 2 cut(s) 1575, 2538
PcsI WCGNNNNNNNCGW 1 cut(s) 1915
PctI GAATGC 2 cut(s) 613, 3042
PdmI GAANNNNTTC 2 cut(s) 435, 476
PflMI CCANNNNNTGG 3 cut(s) 942, 2146, 2281
PkrI GCNGC 9 cut(s) 52, 61, 307, 745, 1854, 1857, 1977, 1980, 2415
Ple19I CGATCG 1 cut(s) 300
PleI GAGTC 3 cut(s) 465, 523, 1613
PpsI GAGTC 3 cut(s) 465, 523, 1613
PshAI GACNNNNGTC 1 cut(s) 2006
PshBI ATTAAT 1 cut(s) 2420
PsiI TTATAA 2 cut(s) 1361, 3026
Psp124BI GAGCTC 1 cut(s) 3147
Psp1406I AACGTT 1 cut(s) 2366
Psp6I CCWGG 3 cut(s) 24, 1950, 3094
PspFI CCCAGC 1 cut(s) 1254
PspGI CCWGG 3 cut(s) 24, 1950, 3094
PspN4I GGNNCC 3 cut(s) 304, 1074, 3212
PspPI GGNCC 6 cut(s) 174, 771, 1275, 1597, 3017, 3211
PspXI VCTCGAGB 1 cut(s) 2160
PstNI CAGNNNCTG 1 cut(s) 2561
PsuI RGATCY 4 cut(s) 129, 902, 1402, 1755
PvuI CGATCG 1 cut(s) 300
PvuII CAGCTG 1 cut(s) 1511
RsaI GTAC 8 cut(s) 338, 359, 1443, 1537, 1615, 2088, 2426, 2862
RsaNI GTAC 8 cut(s) 337, 358, 1442, 1536, 1614, 2087, 2425, 2861
RseI CAYNNNNRTG 1 cut(s) 1797
SacI GAGCTC 1 cut(s) 3147
SapI GCTCTTC 2 cut(s) 1575, 2538
SatI GCNGC 9 cut(s) 51, 60, 306, 744, 1853, 1856, 1976, 1979, 2414
Sau96I GGNCC 6 cut(s) 174, 771, 1275, 1597, 3017, 3211
ScaI AGTACT 1 cut(s) 1615
SchI GAGTC 3 cut(s) 466, 523, 1613
ScrFI CCNGG 3 cut(s) 26, 1952, 3096
SduI GDGCHC 3 cut(s) 24, 2508, 3147
SfaNI GCATC 6 cut(s) 791, 1159, 1633, 1678, 2322, 2944
Sfr274I CTCGAG 1 cut(s) 2160
SfuI TTCGAA 1 cut(s) 983
SinI GGWCC 4 cut(s) 174, 1275, 3017, 3211
SlaI CTCGAG 1 cut(s) 2160
SmiMI CAYNNNNRTG 1 cut(s) 1797
SmlI CTYRAG 3 cut(s) 1445, 2160, 3146
SmoI CTYRAG 3 cut(s) 1445, 2160, 3146
SphI GCATGC 1 cut(s) 2531
SsiI CCGC 5 cut(s) 60, 306, 634, 2040, 3020
SspMI CTAG 5 cut(s) 1049, 1143, 1331, 2100, 2834
SstI GAGCTC 1 cut(s) 3147
StyD4I CCNGG 3 cut(s) 24, 1950, 3094
StyI CCWWGG 3 cut(s) 170, 707, 2788
TaaI ACNGT 9 cut(s) 331, 575, 740, 767, 1315, 1573, 2076, 2086, 2216
TaiI ACGT 5 cut(s) 207, 1706, 2369, 2394, 2694
TaqI TCGA 8 cut(s) 187, 379, 983, 1264, 1767, 1918, 2161, 2471
TatI WGTACW 6 cut(s) 336, 1441, 1535, 1613, 2086, 2424
TauI GCSGC 2 cut(s) 62, 308
TseFI GTSAC 4 cut(s) 160, 217, 2557, 3166
TseI GCWGC 7 cut(s) 50, 743, 1852, 1855, 1975, 1978, 2413
Tsp45I GTSAC 4 cut(s) 160, 217, 2557, 3166
TspGWI ACGGA 1 cut(s) 122
Van91I CCANNNNNTGG 3 cut(s) 942, 2146, 2281
Vha464I CTTAAG 1 cut(s) 1445
VpaK11BI GGWCC 4 cut(s) 174, 1275, 3017, 3211
VspI ATTAAT 1 cut(s) 2420
XagI CCTNNNNNAGG 1 cut(s) 2541
XapI RAATTY 5 cut(s) 587, 881, 1940, 3062, 3247
XceI RCATGY 2 cut(s) 1204, 2531
XcmI CCANNNNNNNNNTGG 1 cut(s) 943
XhoI CTCGAG 1 cut(s) 2160
XmiI GTMKAC 2 cut(s) 1346, 2304
XmnI GAANNNNTTC 2 cut(s) 435, 476
XspI CTAG 5 cut(s) 1049, 1143, 1331, 2100, 2834
ZrmI AGTACT 1 cut(s) 1615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.