Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004050

Physical Location & Seq

Genomic Coordinates Reverse (-)

7187699 .. 7190648

Gene Structure 2950 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G20580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGAGGGCTATTGACGTTAAAACGGGGATGAAGATACCTTGGGACGTACGCTATTCATTAAGTCTATTTATTTTCTTATCATCAATTCTTTTTCTTTCCAACGGCCAAGATTATGGAATGCCGGGCGAGGATGGAGGAGGAGGAGCTGAGCCACCGCCGGAGATGGCACATTGTAACGGTATTTTCATGAGCTACAACTTTGGTAGCCGTGAAAGAGAGTACCCGCACGTGAAGAATGTAACCGCCCAATCATGGGCGTTTAAATCGACTGCGATGATTGTAAACGCGGGTAGGGAAGAGCTTAAGGGATGGCAAATGTTCATAGGGTTCCGTCACAAAGAACTGATCGTTTCCGCGACTGGTGCGACTCCTATGGACGGAGATTATCCTCTAGACGCGAGCAATGGAACCACGTTCGTTGGATCGCCAAACATGGATTTAAAAACCTCTATTGAAACAGCCGGTGATTTCACTCAGATATCTGCGAATATCGAGATCACAGGAACTCTTTTTGGGGTTTCAAAAGCGGTCACGCCCATGCCAAGAACTATTAAGCTCACCAACGATGGTTGGGAATGTCCCGCCGCTAAAAGAAAAGGAGGTAGTATGCACGTGTGTTGCAAGAGAAACCCTAAGATCAAGAACAAGATCGGACTAAAGACAAAGTTTGCACCGAGAAGGTACGGTGACCTGAACATAGTCTACGATGTTCTGCAATCATTCGACAGCAACTACTTAGCCCAAGTGACCATCGACAATGATAATCCTCTCGGGCGGTTAGACCGTTGGAACCTGACTTTTGAATGGATGCGAGGAGAGTTTATAAACACTATGCGAGGAGCTTACACTCATAAGAAAGATCCATCGGAATGCCTTTATAGCAAAGCTGGACAGTATTACAAAGACTTAGATTTCTCCCAGGTCATGAATTGTCAGAGAAAACCAGCCATTTCCGATTTGCCTCCTGAGAAGAAGGAAGATAACATGACAGGAAAGTTACCTTTCTGTTGCAAAAACGGAACTCTCTTGCCACCTATTATGGATCCTTCGAAATCTAGATCTATGTTTCAATTGCAGGTTTTCAAGTTGCCTCCTGACCTAAACAGAACAGCTCTATACCCACCTCAGCATTGGAAAATCGACGGTGTTCTCAATCCTCAGTACAAATGCGGGCCACCGGTTCGTGTTGACCCGTCTCAATTCCCTGATCCTAGCGGTCTACTGGCTGTAACCTACGCCATCTCCAGCTGGCAAGTGGTCTGCAACATAACCAAGCCTAAAGCCCAAGCCTCAAGATGTTGTGTCTCTTTCTCTGCATTTTACAACAACTCTGCAGTTCCTTGCAACACTTGTGCTTGCGGATGCAATGACATCGATACCGACACTTGCAATGCTAACAGTAACCCGCTCCTCCTCCCTCCTGACGCTCTCCTTGTTCCGTTCGATAACCGAACCTTAAAAGCTAAAGCTTGGGCTAAACAAAATCACATGCCAGTACCAAAGAAACTTCCTTGTCCAGATAACTGCGGAGTCAGCATTAACTGGCACGTTAGCACGGATTACAAAAATGGTTGGACCGCAAGGTTAACCGTTTTTAATTGGAGAGATTTCGCGTTTGAGGATTGGTTTGTGGCGATTGATATGGGAAAGGCAGGTCCAGGATATGAAAACGTTTACTCCTTTAATGGAACACGTGTTCCACCAAGCAATCGAACCGTTATCTTCCAAGGCTTGCCTGGTATGAACTATCTTGTAGGTCAAGTTAATGGAACAAATCCATTAAGAGACCCTCCCGTGCCCGGAAAGCAACAATCTGTCATCTCCTTCACCAAGAAAAACATCAAAGGACTGAATATTCCCGAAGGCGACGGTTTCCCAACAAAGCTTTTCTTCAATGGAGAAGAATGTGCGCTTCCAAAACATTTCCCTAAGAAGAGCTCAGGGCATAGACGCGGTATCAGTGTCTCAATGTCCTTTGTTTTCGCAACAATCGCGGCTTTTGCACTAATGATGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020 GO:0031224 GO:0031225 GO:0044425

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COBRA

Protein Analysis

672

Amino Acids

74.67

Weight (kDa)

8.91

Isoelectric Point (pI)

39.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COBRA	PF04833	245 - 424	2.4e-64	COBRA-like protein
COB_C	PF25079	432 - 643	6.9e-96	COBRA family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20580 AT4G27110
fragaria_vesca	FvH4_3g02530 FvH4_3g21960 FvH4_3g21960
malus_domestica	MD03G1209900.v1.1 MD10G1315500.v1.1 MD11G1224600.v1.1
prunus_persica	Prupe.4G025000_v2.0.a1 Prupe.4G205300_v2.0.a1 Prupe.4G205300_v2.0.a1
pyrus_communis	pycom10g26780
rosa_chinensis	RchiOBHm_Chr5g0003851 RchiOBHm_Chr5g0037811
rosa_laevigata	RLG00000031181 RLG00000033811
rosa_multiflora	Rmu_sc0005416.1_g000009 Rmu_sc0006558.1_g000051
rosa_roxburghii	Rroxscaffold_1G00043110
rosa_rugosa	Rorug04G0407500 Rorug05G0167700 Rorug05G0167700 Rorug05G0167800
rosa_samantha	Rh5AG034700 Rh5AG256600 Rh5BG033100 Rh5BG259000 Rh5CG037100 Rh5CG292000 Rh5DG033400 Rh5DG268900
rosa_wichuraiana	Rw5G003180 Rw5G023790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	824
Acc36I	ACCTGC	2 cut(s)	1066, 1643
AccBSI	CCGCTC	1 cut(s)	1408
AccI	GTMKAC	2 cut(s)	702, 1219
AccII	CGCG	6 cut(s)	287, 356, 398, 1613, 1953, 1994
AclI	AACGTT	1 cut(s)	1671
AclWI	GGATC	5 cut(s)	430, 854, 1037, 1050, 1202
AcoI	YGGCCR	1 cut(s)	103
AcvI	CACGTG	3 cut(s)	229, 613, 1694
AfaI	GTAC	5 cut(s)	48, 221, 683, 1163, 1497
AfiI	CCNNNNNNNGG	4 cut(s)	252, 253, 377, 1799
AflII	CTTAAG	1 cut(s)	302
AflIII	ACRYGT	3 cut(s)	612, 1691, 1693
AgeI	ACCGGT	1 cut(s)	1177
AgsI	TTSAA	6 cut(s)	455, 522, 803, 1070, 1084, 1894
AjnI	CCWGG	3 cut(s)	918, 1657, 1735
AloI	GAACNNNNNNTCC	4 cut(s)	1680, 1681, 1712, 1713
Alw21I	GWGCWC	1 cut(s)	1940
Alw26I	GTCTC	4 cut(s)	1200, 1309, 1779, 1969
AlwI	GGATC	5 cut(s)	430, 854, 1037, 1050, 1202
Ama87I	CYCGRG	1 cut(s)	770
AoxI	GGCC	2 cut(s)	103, 1172
AsiGI	ACCGGT	1 cut(s)	1177
AspLEI	GCGC	1 cut(s)	1912
AspS9I	GGNCC	3 cut(s)	1172, 1575, 1655
AsuC2I	CCSGG	2 cut(s)	123, 1800
AsuHPI	GGTGA	4 cut(s)	476, 550, 698, 1819
AsuII	TTCGAA	1 cut(s)	1049
AvaI	CYCGRG	1 cut(s)	770
AvaII	GGWCC	2 cut(s)	1575, 1655
BaeGI	GKGCMC	1 cut(s)	1800
BamHI	GGATCC	1 cut(s)	1042
BanII	GRGCYC	1 cut(s)	1940
BbrPI	CACGTG	3 cut(s)	229, 613, 1694
Bbv12I	GWGCWC	1 cut(s)	1940
BbvCI	CCTCAGC	1 cut(s)	1125
BccI	CCATC	8 cut(s)	125, 157, 303, 560, 758, 871, 1247, 2005
BceAI	ACGGC	2 cut(s)	118, 192
BcgI	CGANNNNNNTGC	2 cut(s)	1354, 1388
BciT130I	CCWGG	3 cut(s)	920, 1659, 1737
BcnI	CCSGG	2 cut(s)	123, 1800
BcoDI	GTCTC	4 cut(s)	1200, 1309, 1779, 1969
BfaI	CTAG	3 cut(s)	392, 1056, 1212
BfmI	CTRYAG	1 cut(s)	1332
BfrI	CTTAAG	1 cut(s)	302
BfuAI	ACCTGC	2 cut(s)	1066, 1643
BglII	AGATCT	1 cut(s)	1058
BisI	GCNGC	2 cut(s)	585, 1995
BlpI	GCTNAGC	1 cut(s)	147
BlsI	GCNGC	2 cut(s)	586, 1996
Bme1390I	CCNGG	5 cut(s)	123, 920, 1659, 1737, 1800
Bme18I	GGWCC	2 cut(s)	1575, 1655
BmeT110I	CYCGRG	1 cut(s)	770
BmgT120I	GGNCC	3 cut(s)	1172, 1575, 1655
BmiI	GGNNCC	4 cut(s)	329, 409, 791, 1044
BmrFI	CCNGG	5 cut(s)	123, 920, 1659, 1737, 1800
BmsI	GCATC	2 cut(s)	798, 1352
BpmI	CTGGAG	1 cut(s)	1228
Bpu10I	CCTNAGC	2 cut(s)	1125, 1939
Bpu1102I	GCTNAGC	1 cut(s)	147
Bpu14I	TTCGAA	1 cut(s)	1049
BpuEI	CTTGAG	1 cut(s)	1276
BpuMI	CCSGG	2 cut(s)	123, 1800
Bsa29I	ATCGAT	1 cut(s)	1374
BsaAI	YACGTR	3 cut(s)	229, 613, 1694
BsaI	GGTCTC	1 cut(s)	1779
BsaJI	CCNNGG	3 cut(s)	38, 918, 1726
BsaWI	WCCGGW	1 cut(s)	1177
BsaXI	ACNNNNNCTCC	4 cut(s)	1226, 1256, 1661, 1691
Bsc4I	CCNNNNNNNGG	4 cut(s)	252, 253, 377, 1799
Bse118I	RCCGGY	2 cut(s)	461, 1177
Bse1I	ACTGG	4 cut(s)	364, 1227, 1493, 1547
Bse3DI	GCAATG	3 cut(s)	409, 1372, 1396
BseBI	CCWGG	3 cut(s)	920, 1659, 1737
BseCI	ATCGAT	1 cut(s)	1374
BseDI	CCNNGG	3 cut(s)	38, 918, 1726
BseGI	GGATG	5 cut(s)	33, 136, 314, 813, 1367
BseLI	CCNNNNNNNGG	4 cut(s)	252, 253, 377, 1799
BseMI	GCAATG	3 cut(s)	409, 1372, 1396
BseMII	CTCAG	6 cut(s)	138, 488, 957, 1139, 1172, 1953
BseNI	ACTGG	4 cut(s)	364, 1227, 1493, 1547
BseRI	GAGGAG	7 cut(s)	150, 153, 156, 828, 852, 1400, 1403
BseSI	GKGCMC	1 cut(s)	1800
Bsh1236I	CGCG	6 cut(s)	287, 356, 398, 1613, 1953, 1994
BshFI	GGCC	2 cut(s)	105, 1174
BshTI	ACCGGT	1 cut(s)	1177
BshVI	ATCGAT	1 cut(s)	1374
BsiHKAI	GWGCWC	1 cut(s)	1940
BsiHKCI	CYCGRG	1 cut(s)	770
BsiSI	CCGG	5 cut(s)	122, 158, 462, 1178, 1800
BsiWI	CGTACG	1 cut(s)	46
BslFI	GGGAC	2 cut(s)	56, 564
BslI	CCNNNNNNNGG	4 cut(s)	252, 253, 377, 1799
BsmAI	GTCTC	4 cut(s)	1200, 1309, 1779, 1969
BsmBI	CGTCTC	1 cut(s)	1200
BsmFI	GGGAC	2 cut(s)	56, 564
BsmI	GAATGC	2 cut(s)	123, 875
BsnI	GGCC	2 cut(s)	105, 1174
Bso31I	GGTCTC	1 cut(s)	1779
BsoBI	CYCGRG	1 cut(s)	770
Bsp119I	TTCGAA	1 cut(s)	1049
Bsp1286I	GDGCHC	2 cut(s)	1800, 1940
Bsp143I	GATC	9 cut(s)	345, 422, 495, 636, 648, 859, 1042, 1058, 1207
Bsp1720I	GCTNAGC	1 cut(s)	147
BspANI	GGCC	2 cut(s)	105, 1174
BspCNI	CTCAG	6 cut(s)	139, 487, 958, 1138, 1171, 1952
BspDI	ATCGAT	1 cut(s)	1374
BspFNI	CGCG	6 cut(s)	287, 356, 398, 1613, 1953, 1994
BspHI	TCATGA	2 cut(s)	186, 924
BspLI	GGNNCC	4 cut(s)	329, 409, 791, 1044
BspMAI	CTGCAG	1 cut(s)	1336
BspMI	ACCTGC	2 cut(s)	1066, 1643
BspPI	GGATC	5 cut(s)	430, 854, 1037, 1050, 1202
BspQI	GCTCTTC	2 cut(s)	291, 1928
BspT104I	TTCGAA	1 cut(s)	1049
BspTI	CTTAAG	1 cut(s)	302
BspTNI	GGTCTC	1 cut(s)	1779
BsrBI	CCGCTC	1 cut(s)	1408
BsrDI	GCAATG	3 cut(s)	409, 1372, 1396
BsrFI	RCCGGY	2 cut(s)	461, 1177
BsrI	ACTGG	4 cut(s)	364, 1227, 1493, 1547
BssAI	RCCGGY	2 cut(s)	461, 1177
BssECI	CCNNGG	3 cut(s)	38, 918, 1726
BssMI	GATC	9 cut(s)	345, 422, 495, 636, 648, 859, 1042, 1058, 1207
BssT1I	CCWWGG	2 cut(s)	38, 1726
Bst2UI	CCWGG	3 cut(s)	920, 1659, 1737
Bst4CI	ACNGT	9 cut(s)	179, 686, 785, 894, 1145, 1400, 1591, 1717, 1871
Bst6I	CTCTTC	2 cut(s)	291, 1928
BstAFI	CTTAAG	1 cut(s)	302
BstBAI	YACGTR	3 cut(s)	229, 613, 1694
BstBI	TTCGAA	1 cut(s)	1049
BstC8I	GCNNGC	5 cut(s)	400, 1172, 1250, 1357, 1733
BstEII	GGTNACC	1 cut(s)	686
BstF5I	GGATG	5 cut(s)	33, 136, 314, 813, 1367
BstFNI	CGCG	6 cut(s)	287, 356, 398, 1613, 1953, 1994
BstHHI	GCGC	1 cut(s)	1912
BstKTI	GATC	9 cut(s)	348, 425, 498, 639, 651, 862, 1045, 1061, 1210
BstMAI	GTCTC	4 cut(s)	1200, 1309, 1779, 1969
BstMBI	GATC	9 cut(s)	345, 422, 495, 636, 648, 859, 1042, 1058, 1207
BstMWI	GCNNNNNNNGC	6 cut(s)	362, 879, 1533, 1804, 1991, 2000
BstNI	CCWGG	3 cut(s)	920, 1659, 1737
BstNSI	RCATGY	1 cut(s)	1492
BstPI	GGTNACC	1 cut(s)	686
BstSCI	CCNGG	5 cut(s)	121, 918, 1657, 1735, 1798
BstSFI	CTRYAG	1 cut(s)	1332
BstSLI	GKGCMC	1 cut(s)	1800
BstUI	CGCG	6 cut(s)	287, 356, 398, 1613, 1953, 1994
BstX2I	RGATCY	3 cut(s)	859, 1042, 1058
BstXI	CCANNNNNNTGG	1 cut(s)	113
BstYI	RGATCY	3 cut(s)	859, 1042, 1058
Bsu15I	ATCGAT	1 cut(s)	1374
BsuRI	GGCC	2 cut(s)	105, 1174
BsuTUI	ATCGAT	1 cut(s)	1374
BtgZI	GCGATG	1 cut(s)	287
BtsCI	GGATG	5 cut(s)	33, 136, 314, 813, 1367
BtsIMutI	CAGTG	1 cut(s)	1966
BveI	ACCTGC	2 cut(s)	1066, 1643
Cac8I	GCNNGC	5 cut(s)	400, 1172, 1250, 1357, 1733
CciI	TCATGA	2 cut(s)	186, 924
CfoI	GCGC	1 cut(s)	1912
Cfr10I	RCCGGY	2 cut(s)	461, 1177
Cfr13I	GGNCC	3 cut(s)	1172, 1575, 1655
ClaI	ATCGAT	1 cut(s)	1374
CseI	GACGC	3 cut(s)	404, 1433, 1959
Csp6I	GTAC	5 cut(s)	47, 220, 682, 1162, 1496
CspAI	ACCGGT	1 cut(s)	1177
CspCI	CAANNNNNGTGG	2 cut(s)	400, 435
CviAII	CATG	7 cut(s)	187, 252, 433, 538, 925, 985, 1489
CviQI	GTAC	5 cut(s)	47, 220, 682, 1162, 1496
DpnI	GATC	9 cut(s)	347, 424, 497, 638, 650, 861, 1044, 1060, 1209
DpnII	GATC	9 cut(s)	345, 422, 495, 636, 648, 859, 1042, 1058, 1207
DraI	TTTAAA	2 cut(s)	262, 441
EaeI	YGGCCR	1 cut(s)	103
Eam1104I	CTCTTC	2 cut(s)	291, 1928
EarI	CTCTTC	2 cut(s)	291, 1928
Ecl136II	GAGCTC	1 cut(s)	1938
Eco130I	CCWWGG	2 cut(s)	38, 1726
Eco24I	GRGCYC	1 cut(s)	1940
Eco31I	GGTCTC	1 cut(s)	1779
Eco32I	GATATC	1 cut(s)	480
Eco47I	GGWCC	2 cut(s)	1575, 1655
Eco53kI	GAGCTC	1 cut(s)	1938
Eco72I	CACGTG	3 cut(s)	229, 613, 1694
Eco88I	CYCGRG	1 cut(s)	770
Eco91I	GGTNACC	1 cut(s)	686
EcoICRI	GAGCTC	1 cut(s)	1938
EcoO65I	GGTNACC	1 cut(s)	686
EcoRII	CCWGG	3 cut(s)	918, 1657, 1735
EcoRV	GATATC	1 cut(s)	480
EcoT14I	CCWWGG	2 cut(s)	38, 1726
EcoT38I	GRGCYC	1 cut(s)	1940
ErhI	CCWWGG	2 cut(s)	38, 1726
Esp3I	CGTCTC	1 cut(s)	1200
FaeI	CATG	7 cut(s)	190, 255, 436, 541, 928, 988, 1492
FalI	AAGNNNNNCTT	2 cut(s)	1874, 1906
FaqI	GGGAC	2 cut(s)	56, 564
FatI	CATG	7 cut(s)	186, 251, 432, 537, 924, 984, 1488
FauI	CCCGC	5 cut(s)	231, 280, 589, 1163, 1413
FblI	GTMKAC	2 cut(s)	702, 1219
Fnu4HI	GCNGC	2 cut(s)	585, 1995
FokI	GGATG	5 cut(s)	40, 143, 321, 820, 1374
FriOI	GRGCYC	1 cut(s)	1940
Fsp4HI	GCNGC	2 cut(s)	585, 1995
FspBI	CTAG	3 cut(s)	392, 1056, 1212
GlaI	GCGC	1 cut(s)	1911
GluI	GCNGC	2 cut(s)	585, 1995
GsuI	CTGGAG	1 cut(s)	1228
HaeIII	GGCC	2 cut(s)	105, 1174
HapII	CCGG	5 cut(s)	122, 158, 462, 1178, 1800
HgaI	GACGC	3 cut(s)	404, 1433, 1959
HhaI	GCGC	1 cut(s)	1912
Hin1II	CATG	7 cut(s)	190, 255, 436, 541, 928, 988, 1492
Hin6I	GCGC	1 cut(s)	1910
HinP1I	GCGC	1 cut(s)	1910
HincII	GTYRAC	2 cut(s)	1189, 1587
HindII	GTYRAC	2 cut(s)	1189, 1587
HindIII	AAGCTT	2 cut(s)	1467, 1883
HinfI	GANTC	2 cut(s)	367, 1530
HpaI	GTTAAC	1 cut(s)	1587
HpaII	CCGG	5 cut(s)	122, 158, 462, 1178, 1800
HphI	GGTGA	4 cut(s)	476, 550, 698, 1819
Hpy166II	GTNNAC	6 cut(s)	283, 703, 1189, 1220, 1587, 1675
Hpy188I	TCNGA	5 cut(s)	477, 653, 868, 936, 955
Hpy8I	GTNNAC	6 cut(s)	283, 703, 1189, 1220, 1587, 1675
Hpy99I	CGWCG	2 cut(s)	1145, 1871
HpyAV	CCTTC	5 cut(s)	672, 967, 1056, 1834, 1856
HpyCH4III	ACNGT	9 cut(s)	179, 686, 785, 894, 1145, 1400, 1591, 1717, 1871
HpyCH4IV	ACGT	8 cut(s)	15, 45, 228, 413, 612, 1548, 1671, 1693
HpyF10VI	GCNNNNNNNGC	6 cut(s)	362, 879, 1533, 1804, 1991, 2000
HpySE526I	ACGT	8 cut(s)	15, 45, 228, 413, 612, 1548, 1671, 1693
Hsp92II	CATG	7 cut(s)	190, 255, 436, 541, 928, 988, 1492
HspAI	GCGC	1 cut(s)	1910
KspAI	GTTAAC	1 cut(s)	1587
Kzo9I	GATC	9 cut(s)	345, 422, 495, 636, 648, 859, 1042, 1058, 1207
LguI	GCTCTTC	2 cut(s)	291, 1928
LmnI	GCTCC	3 cut(s)	143, 839, 1413
LweI	GCATC	2 cut(s)	798, 1352
MaeI	CTAG	3 cut(s)	392, 1056, 1212
MaeII	ACGT	8 cut(s)	15, 45, 228, 413, 612, 1548, 1671, 1693
MaeIII	GTNAC	9 cut(s)	173, 238, 332, 529, 686, 745, 996, 1228, 1400
MalI	GATC	9 cut(s)	347, 424, 497, 638, 650, 861, 1044, 1060, 1209
MbiI	CCGCTC	1 cut(s)	1408
MboI	GATC	9 cut(s)	345, 422, 495, 636, 648, 859, 1042, 1058, 1207
MboII	GAAGA	9 cut(s)	43, 244, 308, 982, 989, 1714, 1882, 1913, 1945
MfeI	CAATTG	1 cut(s)	1070
MflI	RGATCY	3 cut(s)	859, 1042, 1058
MhlI	GDGCHC	2 cut(s)	1800, 1940
MluCI	AATT	5 cut(s)	84, 928, 1070, 1199, 1597
MlyI	GAGTC	2 cut(s)	361, 1539
MmeI	TCCRAC	4 cut(s)	123, 400, 767, 1553
MslI	CAYNNNNRTG	2 cut(s)	536, 868
MspA1I	CMGCKG	1 cut(s)	1248
MspCI	CTTAAG	1 cut(s)	302
MspI	CCGG	5 cut(s)	122, 158, 462, 1178, 1800
MspR9I	CCNGG	5 cut(s)	123, 920, 1659, 1737, 1800
MunI	CAATTG	1 cut(s)	1070
Mva1269I	GAATGC	2 cut(s)	123, 875
MvaI	CCWGG	3 cut(s)	920, 1659, 1737
MvnI	CGCG	6 cut(s)	287, 356, 398, 1613, 1953, 1994
MwoI	GCNNNNNNNGC	6 cut(s)	362, 879, 1533, 1804, 1991, 2000
NciI	CCSGG	2 cut(s)	123, 1800
NdeII	GATC	9 cut(s)	345, 422, 495, 636, 648, 859, 1042, 1058, 1207
NlaIII	CATG	7 cut(s)	190, 255, 436, 541, 928, 988, 1492
NlaIV	GGNNCC	4 cut(s)	329, 409, 791, 1044
NmuCI	GTSAC	4 cut(s)	332, 529, 686, 745
NspI	RCATGY	1 cut(s)	1492
NspV	TTCGAA	1 cut(s)	1049
PagI	TCATGA	2 cut(s)	186, 924
PciSI	GCTCTTC	2 cut(s)	291, 1928
PctI	GAATGC	2 cut(s)	123, 875
Pfl23II	CGTACG	1 cut(s)	46
PfoI	TCCNGGA	1 cut(s)	1657
PinAI	ACCGGT	1 cut(s)	1177
PkrI	GCNGC	2 cut(s)	586, 1996
PleI	GAGTC	2 cut(s)	361, 1538
PmaCI	CACGTG	3 cut(s)	229, 613, 1694
PmlI	CACGTG	3 cut(s)	229, 613, 1694
PpsI	GAGTC	2 cut(s)	361, 1538
Ppu21I	YACGTR	3 cut(s)	229, 613, 1694
PsiI	TTATAA	1 cut(s)	824
Psp124BI	GAGCTC	1 cut(s)	1940
Psp1406I	AACGTT	1 cut(s)	1671
Psp6I	CCWGG	3 cut(s)	918, 1657, 1735
PspCI	CACGTG	3 cut(s)	229, 613, 1694
PspEI	GGTNACC	1 cut(s)	686
PspGI	CCWGG	3 cut(s)	918, 1657, 1735
PspLI	CGTACG	1 cut(s)	46
PspN4I	GGNNCC	4 cut(s)	329, 409, 791, 1044
PspPI	GGNCC	3 cut(s)	1172, 1575, 1655
PsrI	GAACNNNNNNTAC	2 cut(s)	686, 718
PstI	CTGCAG	1 cut(s)	1336
PsuI	RGATCY	3 cut(s)	859, 1042, 1058
PvuII	CAGCTG	1 cut(s)	1248
RsaI	GTAC	5 cut(s)	48, 221, 683, 1163, 1497
RsaNI	GTAC	5 cut(s)	47, 220, 682, 1162, 1496
RseI	CAYNNNNRTG	2 cut(s)	536, 868
SacI	GAGCTC	1 cut(s)	1940
SapI	GCTCTTC	2 cut(s)	291, 1928
SatI	GCNGC	2 cut(s)	585, 1995
Sau3AI	GATC	9 cut(s)	345, 422, 495, 636, 648, 859, 1042, 1058, 1207
Sau96I	GGNCC	3 cut(s)	1172, 1575, 1655
SchI	GAGTC	2 cut(s)	361, 1539
ScrFI	CCNGG	5 cut(s)	123, 920, 1659, 1737, 1800
SduI	GDGCHC	2 cut(s)	1800, 1940
SfaNI	GCATC	2 cut(s)	798, 1352
SfcI	CTRYAG	1 cut(s)	1332
SfuI	TTCGAA	1 cut(s)	1049
SinI	GGWCC	2 cut(s)	1575, 1655
SmiMI	CAYNNNNRTG	2 cut(s)	536, 868
SmlI	CTYRAG	2 cut(s)	302, 1291
SmoI	CTYRAG	2 cut(s)	302, 1291
Sse9I	AATT	5 cut(s)	84, 928, 1070, 1199, 1597
SspI	AATATT	1 cut(s)	1855
SspMI	CTAG	3 cut(s)	392, 1056, 1212
SstI	GAGCTC	1 cut(s)	1940
StyD4I	CCNGG	5 cut(s)	121, 918, 1657, 1735, 1798
StyI	CCWWGG	2 cut(s)	38, 1726
TaaI	ACNGT	9 cut(s)	179, 686, 785, 894, 1145, 1400, 1591, 1717, 1871
TaiI	ACGT	8 cut(s)	18, 48, 231, 416, 615, 1551, 1674, 1696
TaqI	TCGA	9 cut(s)	266, 492, 723, 753, 1049, 1140, 1374, 1443, 1711
TasI	AATT	5 cut(s)	84, 928, 1070, 1199, 1597
TatI	WGTACW	1 cut(s)	1161
TauI	GCSGC	2 cut(s)	587, 1997
TscAI	CASTG	1 cut(s)	1966
TseFI	GTSAC	4 cut(s)	332, 529, 686, 745
Tsp45I	GTSAC	4 cut(s)	332, 529, 686, 745
TspDTI	ATGAA	7 cut(s)	44, 45, 175, 310, 941, 1680, 1757
TspGWI	ACGGA	5 cut(s)	320, 393, 1032, 1428, 1571
TspRI	CASTG	1 cut(s)	1966
Vha464I	CTTAAG	1 cut(s)	302
VpaK11BI	GGWCC	2 cut(s)	1575, 1655
XbaI	TCTAGA	2 cut(s)	391, 1055
XceI	RCATGY	1 cut(s)	1492
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1128, 1252, 1733
XmiI	GTMKAC	2 cut(s)	702, 1219
XspI	CTAG	3 cut(s)	392, 1056, 1212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.