Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004050

Physical Location & Seq

Genomic Coordinates Reverse (-)

2952553 .. 2954716

Gene Structure 2164 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G003180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGAAAAGGGCTTGGAGGGTTCTAACACCCATGTTTATCTTGTTTGCTTTTGAATTCTCTAATTTCACCATAGCTCAAGATTATGGTGATGATGATCAACAACCAGCTGCACCACCCCCGGCACAAGACAATTGCAATGGGATCTTTCTAGCCTACTACTTCATTTCGCGCCACAAAATATACCCTCTCCTCAAGAATGCAGACAAGCAAGCATGGGCCTTCAATTCCACGGCGACCATAATCAACACCGGCTCTTACGAACTCAAAGCATGGAAGATTTATATAGGTTTTCAACACAAAGAGATTCTAGTTGCTGCAAATGGAGCGGTTCTAGTGAATGGTGAGGATTTCCCGGCTGAGGTTGGAACTAATGGGACTTATTTTTCTGGTGCCCAACAGACAGATTTGAAAACCTCAATTAGCACAGGTGGAGATTATACCCAAATTCAAGCCCAGATACAAATAAGTGGCACTCAATTCGGGCTCAAGTCATCTGTGACCCCAATGCCTAAAACAATACGCCTCGTTAACGATGGATTCAAGTGCCCCTCACCAACCAAAAAAAAGACAGCACTTACTGTTTGTTGCGTTAGGAATCCGAAAAGCAAGGTCACTACCAACACGGTCAAGTTCTTACCTCGCCAAAAGGGTGATCTATCAATCTCTTATGATGTAATTCAAGCATATGGGAACAATTATCAAGCTCAGGTGACAATGGAGAGCACTAGCCCTTTGGGACGTTTGGACCATTGGAACATAAGCTGGGAATGGATGAGAGGGGAATTCATATACAATATGAAAGGAGCTTATACACATAAAATGGACTATCTGCCTTGCATTTATGGTGCTCCCGGACAACAATACCAACAGATGGACTTCTCGAAGGTTATGAACTGCGAAAAGAATCCCACCATCGCTGACCTTCCCAGGGAGAGATCAAACGACTCTGAAGTCGGAAGGATACCTTACTGTTGTAGAAATGGTAGTCTCTTGTCTCCCATAATGAACGTAACCCAATCCAAGTCTGTTTTCCAATTGCAAGTGTTCAAGCTAGCTCCTGACTTGGAACGAACAACATTGTACCCTCCGGAAAAATGGAAAGTTTCAGGGGTAATTAGTGCTGATTACAAATGCGGGCAACCTATTAGGGTCGATCCTACTGAATTTCCAGACCCAAGTGGTCTTCAAGCTTCAACATTAGCAATTGCAAGCTGGCAAGTAATTTGCAACATCACAAGGCCTCAAAATAAGAAAAATAAGTGTTGTGTTTCATTCTCTTCTTACTACAATGAATCTGTCATACCCTGCAACACGTGTGCCTGTGGCTGTACTAACACTAAAAATTGCAACCCTTCTGCACGAGCCATGTTTCTACCTCCTGAAGCTCTTCTTGTACCGTTTGAAAATAGGTCATCCATGGCGGAAGCTTGGGCGAAAATCAAGCATTTTCATAAGCCCAAGCCACTACCTTGTGGTGACAATTGTGGAGTTAGCATCAATTGGCATGTGCTATCAGATTACAATGATGGATGGACAGCTAGAATCACATTGTTCAATTGGATGCCAATGAATTTCGAAGATTGGTTTACCGCAGTCGAAATGAAGAAGGGTGGTGGACGTGGCTTTGAAAATGCTTACTCTATGAATGGGACCAAAATTTCTAATATGAATAACATCATCTTCCTCCAAGGTTTGAAGGGCATGAATTTTTTGGTGATGCAGACAAATGGAACAAAGCCTAATAGTCCCAAGGTTCCTGGAAAGCAACAGTCTGTGATTTCTTTTAAAAAGTCTAGTACACCGGGTATAGAAGTAGCCAAAGGGGATGGCTTTCCTGCAAAAGTGTTTTTCAATGGGGAAGAATGTTCGCTTCCTACTTCAATTCCATCATATGGAAACCAGAATCATGTAAATTTGGTAGTTGTATTTTTCCTTTCAATTTTGAGTACTTTTGCTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COBRA

Protein Analysis

653

Amino Acids

72.85

Weight (kDa)

8.9

Isoelectric Point (pI)

30.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COBRA	PF04833	233 - 412	3.7e-59	COBRA-like protein
COB_C	PF25079	420 - 629	4.7e-96	COBRA family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20580 AT4G27110
fragaria_vesca	FvH4_3g02530 FvH4_3g21960 FvH4_3g21960
malus_domestica	MD03G1209900.v1.1 MD10G1315500.v1.1 MD11G1224600.v1.1
prunus_persica	Prupe.4G025000_v2.0.a1 Prupe.4G205300_v2.0.a1 Prupe.4G205300_v2.0.a1
pyrus_communis	pycom10g26780
rosa_chinensis	RchiOBHm_Chr5g0003851 RchiOBHm_Chr5g0037811
rosa_laevigata	RLG00000031181 RLG00000033811
rosa_multiflora	Rmu_sc0005416.1_g000009 Rmu_sc0006558.1_g000051
rosa_roxburghii	Rroxscaffold_1G00043110
rosa_rugosa	Rorug04G0407500 Rorug05G0167700 Rorug05G0167700 Rorug05G0167800
rosa_samantha	Rh5AG034700 Rh5AG256600 Rh5BG033100 Rh5BG259000 Rh5CG037100 Rh5CG292000 Rh5DG033400 Rh5DG268900
rosa_wichuraiana	Rw5G003180 Rw5G023790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	950
AccB1I	GGYRCC	1 cut(s)	389
AccB7I	CCANNNNNTGG	2 cut(s)	871, 1892
AccBSI	CCGCTC	1 cut(s)	326
AccII	CGCG	1 cut(s)	169
AccIII	TCCGGA	1 cut(s)	1087
AciI	CCGC	4 cut(s)	326, 1134, 1421, 1590
AclWI	GGATC	2 cut(s)	149, 1148
AcsI	RAATTY	8 cut(s)	53, 444, 782, 1163, 1570, 1656, 1705, 1912
AcuI	CTGAAG	2 cut(s)	969, 1401
AcvI	CACGTG	1 cut(s)	1314
AfaI	GTAC	5 cut(s)	1082, 1330, 1395, 1798, 1948
AfiI	CCNNNNNNNGG	4 cut(s)	358, 871, 928, 1892
AflIII	ACRYGT	2 cut(s)	1311, 1313
AjiI	CACGTC	1 cut(s)	1619
AjnI	CCWGG	2 cut(s)	926, 1756
AjuI	GAANNNNNNNTTGG	2 cut(s)	1013, 1045
Alw21I	GWGCWC	2 cut(s)	725, 850
Alw26I	GTCTC	2 cut(s)	992, 999
AlwI	GGATC	2 cut(s)	149, 1148
Aor13HI	TCCGGA	1 cut(s)	1087
AoxI	GGCC	2 cut(s)	216, 1238
ApeKI	GCWGC	2 cut(s)	107, 314
ApoI	RAATTY	8 cut(s)	53, 444, 782, 1163, 1570, 1656, 1705, 1912
Asp700I	GAANNNNTTC	1 cut(s)	1386
AspLEI	GCGC	1 cut(s)	171
AspS9I	GGNCC	3 cut(s)	216, 745, 1650
AsuC2I	CCSGG	4 cut(s)	119, 353, 852, 1803
AsuHPI	GGTGA	8 cut(s)	58, 98, 353, 543, 662, 721, 1487, 1726
AsuII	TTCGAA	1 cut(s)	1575
AsuNHI	GCTAGC	1 cut(s)	1051
AvaII	GGWCC	2 cut(s)	745, 1650
BaeGI	GKGCMC	2 cut(s)	394, 548
BanI	GGYRCC	1 cut(s)	389
BanII	GRGCYC	1 cut(s)	486
BauI	CACGAG	1 cut(s)	1359
BbrPI	CACGTG	1 cut(s)	1314
BbsI	GAAGAC	1 cut(s)	1175
Bbv12I	GWGCWC	2 cut(s)	725, 850
BbvCI	CCTCAGC	1 cut(s)	357
BbvI	GCAGC	2 cut(s)	94, 301
BccI	CCATC	7 cut(s)	527, 865, 920, 1520, 1524, 1820, 1894
BceAI	ACGGC	1 cut(s)	246
BcgI	CGANNNNNNTGC	2 cut(s)	460, 494
BciT130I	CCWGG	2 cut(s)	928, 1758
BciVI	GTATCC	1 cut(s)	954
BclI	TGATCA	1 cut(s)	94
BcnI	CCSGG	4 cut(s)	119, 353, 852, 1803
BcoDI	GTCTC	2 cut(s)	992, 999
BfaI	CTAG	7 cut(s)	149, 308, 332, 726, 1052, 1539, 1794
BfuI	GTATCC	1 cut(s)	954
BisI	GCNGC	2 cut(s)	108, 315
BlsI	GCNGC	2 cut(s)	109, 316
BmcAI	AGTACT	1 cut(s)	1948
Bme1390I	CCNGG	6 cut(s)	119, 353, 852, 928, 1758, 1803
Bme18I	GGWCC	2 cut(s)	745, 1650
BmgBI	CACGTC	1 cut(s)	1619
BmgT120I	GGNCC	3 cut(s)	216, 745, 1650
BmiI	GGNNCC	3 cut(s)	391, 1651, 1755
BmrFI	CCNGG	6 cut(s)	119, 353, 852, 928, 1758, 1803
BmsI	GCATC	3 cut(s)	1503, 1551, 1707
BmtI	GCTAGC	1 cut(s)	1055
BpiI	GAAGAC	1 cut(s)	1175
Bpu10I	CCTNAGC	2 cut(s)	357, 705
Bpu14I	TTCGAA	1 cut(s)	1575
BpuEI	CTTGAG	3 cut(s)	60, 176, 470
BpuMI	CCSGG	4 cut(s)	119, 353, 852, 1803
BsaAI	YACGTR	1 cut(s)	1314
BsaBI	GATNNNNATC	1 cut(s)	93
BsaJI	CCNNGG	7 cut(s)	117, 228, 926, 927, 1416, 1687, 1749
BsaWI	WCCGGW	1 cut(s)	1087
Bsc4I	CCNNNNNNNGG	4 cut(s)	358, 871, 928, 1892
Bse118I	RCCGGY	1 cut(s)	248
Bse3DI	GCAATG	1 cut(s)	142
Bse8I	GATNNNNATC	1 cut(s)	93
BseAI	TCCGGA	1 cut(s)	1087
BseBI	CCWGG	2 cut(s)	928, 1758
BseDI	CCNNGG	7 cut(s)	117, 228, 926, 927, 1416, 1687, 1749
BseGI	GGATG	5 cut(s)	777, 1412, 1535, 1566, 1831
BseJI	GATNNNNATC	1 cut(s)	93
BseLI	CCNNNNNNNGG	4 cut(s)	358, 871, 928, 1892
BseMI	GCAATG	1 cut(s)	142
BseMII	CTCAG	2 cut(s)	348, 719
BseRI	GAGGAG	1 cut(s)	179
BseSI	GKGCMC	2 cut(s)	394, 548
BseXI	GCAGC	2 cut(s)	94, 301
BseYI	CCCAGC	1 cut(s)	762
BsgI	GTGCAG	2 cut(s)	93, 1341
Bsh1236I	CGCG	1 cut(s)	169
BshFI	GGCC	2 cut(s)	218, 1240
BshNI	GGYRCC	1 cut(s)	389
BsiHKAI	GWGCWC	2 cut(s)	725, 850
BsiSI	CCGG	6 cut(s)	119, 249, 353, 852, 1088, 1802
BslFI	GGGAC	4 cut(s)	388, 750, 1663, 1731
BslI	CCNNNNNNNGG	4 cut(s)	358, 871, 928, 1892
BsmAI	GTCTC	2 cut(s)	992, 999
BsmFI	GGGAC	4 cut(s)	388, 750, 1663, 1731
BsmI	GAATGC	1 cut(s)	202
BsnI	GGCC	2 cut(s)	218, 1240
Bsp119I	TTCGAA	1 cut(s)	1575
Bsp1286I	GDGCHC	5 cut(s)	394, 486, 548, 725, 850
Bsp13I	TCCGGA	1 cut(s)	1087
Bsp143I	GATC	5 cut(s)	94, 141, 652, 935, 1153
Bsp19I	CCATGG	1 cut(s)	1416
BspACI	CCGC	4 cut(s)	326, 1134, 1421, 1590
BspANI	GGCC	2 cut(s)	218, 1240
BspCNI	CTCAG	2 cut(s)	349, 718
BspEI	TCCGGA	1 cut(s)	1087
BspFNI	CGCG	1 cut(s)	169
BspLI	GGNNCC	3 cut(s)	391, 1651, 1755
BspOI	GCTAGC	1 cut(s)	1055
BspPI	GGATC	2 cut(s)	149, 1148
BspQI	GCTCTTC	1 cut(s)	1392
BspT104I	TTCGAA	1 cut(s)	1575
BspT107I	GGYRCC	1 cut(s)	389
BsrBI	CCGCTC	1 cut(s)	326
BsrDI	GCAATG	1 cut(s)	142
BsrFI	RCCGGY	1 cut(s)	248
BssAI	RCCGGY	1 cut(s)	248
BssECI	CCNNGG	7 cut(s)	117, 228, 926, 927, 1416, 1687, 1749
BssMI	GATC	5 cut(s)	94, 141, 652, 935, 1153
BssSI	CACGAG	1 cut(s)	1359
BssT1I	CCWWGG	3 cut(s)	1416, 1687, 1749
Bst2BI	CACGAG	1 cut(s)	1359
Bst2UI	CCWGG	2 cut(s)	928, 1758
Bst4CI	ACNGT	5 cut(s)	580, 625, 971, 1398, 1770
Bst6I	CTCTTC	2 cut(s)	1282, 1392
BstBAI	YACGTR	1 cut(s)	1314
BstBI	TTCGAA	1 cut(s)	1575
BstC8I	GCNNGC	5 cut(s)	210, 1053, 1136, 1210, 1214
BstDEI	CTNAG	2 cut(s)	357, 705
BstDSI	CCRYGG	2 cut(s)	228, 1416
BstF5I	GGATG	5 cut(s)	777, 1412, 1535, 1566, 1831
BstFNI	CGCG	1 cut(s)	169
BstHHI	GCGC	1 cut(s)	171
BstKTI	GATC	5 cut(s)	97, 144, 655, 938, 1156
BstMAI	GTCTC	2 cut(s)	992, 999
BstMBI	GATC	5 cut(s)	94, 141, 652, 935, 1153
BstMWI	GCNNNNNNNGC	1 cut(s)	323
BstNI	CCWGG	2 cut(s)	928, 1758
BstNSI	RCATGY	1 cut(s)	1508
BstSCI	CCNGG	6 cut(s)	117, 351, 850, 926, 1756, 1801
BstSLI	GKGCMC	2 cut(s)	394, 548
BstUI	CGCG	1 cut(s)	169
BstV1I	GCAGC	2 cut(s)	94, 301
BstV2I	GAAGAC	1 cut(s)	1175
BstX2I	RGATCY	1 cut(s)	141
BstYI	RGATCY	1 cut(s)	141
BsuI	GTATCC	1 cut(s)	954
BsuRI	GGCC	2 cut(s)	218, 1240
BtgI	CCRYGG	2 cut(s)	228, 1416
BtgZI	GCGATG	1 cut(s)	898
BtrI	CACGTC	1 cut(s)	1619
BtsCI	GGATG	5 cut(s)	777, 1412, 1535, 1566, 1831
Cac8I	GCNNGC	5 cut(s)	210, 1053, 1136, 1210, 1214
CfoI	GCGC	1 cut(s)	171
Cfr10I	RCCGGY	1 cut(s)	248
Cfr13I	GGNCC	3 cut(s)	216, 745, 1650
Csp6I	GTAC	5 cut(s)	1081, 1329, 1394, 1797, 1947
CviAII	CATG	8 cut(s)	31, 213, 270, 1366, 1417, 1505, 1702, 1907
CviQI	GTAC	5 cut(s)	1081, 1329, 1394, 1797, 1947
DdeI	CTNAG	2 cut(s)	357, 705
DpnI	GATC	5 cut(s)	96, 143, 654, 937, 1155
DpnII	GATC	5 cut(s)	94, 141, 652, 935, 1153
DraI	TTTAAA	1 cut(s)	1786
DrdI	GACNNNNNNGTC	1 cut(s)	950
DseDI	GACNNNNNNGTC	1 cut(s)	950
Eam1104I	CTCTTC	2 cut(s)	1282, 1392
EarI	CTCTTC	2 cut(s)	1282, 1392
EciI	GGCGGA	1 cut(s)	1436
Eco130I	CCWWGG	3 cut(s)	1416, 1687, 1749
Eco147I	AGGCCT	1 cut(s)	1240
Eco24I	GRGCYC	1 cut(s)	486
Eco47I	GGWCC	2 cut(s)	745, 1650
Eco57I	CTGAAG	2 cut(s)	969, 1401
Eco72I	CACGTG	1 cut(s)	1314
EcoRI	GAATTC	2 cut(s)	53, 782
EcoRII	CCWGG	2 cut(s)	926, 1756
EcoT14I	CCWWGG	3 cut(s)	1416, 1687, 1749
EcoT38I	GRGCYC	1 cut(s)	486
ErhI	CCWWGG	3 cut(s)	1416, 1687, 1749
FaeI	CATG	8 cut(s)	34, 216, 273, 1369, 1420, 1508, 1705, 1910
FalI	AAGNNNNNCTT	4 cut(s)	949, 981, 1374, 1406
FaqI	GGGAC	4 cut(s)	388, 750, 1663, 1731
FatI	CATG	8 cut(s)	30, 212, 269, 1365, 1416, 1504, 1701, 1906
FauI	CCCGC	1 cut(s)	1127
FauNDI	CATATG	2 cut(s)	685, 1891
FbaI	TGATCA	1 cut(s)	94
Fnu4HI	GCNGC	2 cut(s)	108, 315
FokI	GGATG	5 cut(s)	784, 1399, 1542, 1573, 1838
FriOI	GRGCYC	1 cut(s)	486
Fsp4HI	GCNGC	2 cut(s)	108, 315
FspBI	CTAG	7 cut(s)	149, 308, 332, 726, 1052, 1539, 1794
GlaI	GCGC	1 cut(s)	170
GluI	GCNGC	2 cut(s)	108, 315
GsaI	CCCAGC	1 cut(s)	766
HaeIII	GGCC	2 cut(s)	218, 1240
HapII	CCGG	6 cut(s)	119, 249, 353, 852, 1088, 1802
HhaI	GCGC	1 cut(s)	171
Hin1II	CATG	8 cut(s)	34, 216, 273, 1369, 1420, 1508, 1705, 1910
Hin6I	GCGC	1 cut(s)	169
HinP1I	GCGC	1 cut(s)	169
HincII	GTYRAC	1 cut(s)	529
HindII	GTYRAC	1 cut(s)	529
HindIII	AAGCTT	2 cut(s)	1188, 1425
HinfI	GANTC	8 cut(s)	304, 537, 595, 904, 944, 1292, 1542, 1903
HpaI	GTTAAC	1 cut(s)	529
HpaII	CCGG	6 cut(s)	119, 249, 353, 852, 1088, 1802
HphI	GGTGA	8 cut(s)	58, 98, 353, 543, 662, 721, 1487, 1726
Hpy166II	GTNNAC	4 cut(s)	529, 1587, 1616, 1799
Hpy188I	TCNGA	4 cut(s)	600, 949, 956, 1516
Hpy188III	TCNNGA	7 cut(s)	77, 193, 880, 1058, 1088, 1169, 1379
Hpy8I	GTNNAC	4 cut(s)	529, 1587, 1616, 1799
HpyAV	CCTTC	7 cut(s)	229, 877, 932, 951, 1362, 1600, 1690
HpyCH4III	ACNGT	5 cut(s)	580, 625, 971, 1398, 1770
HpyCH4IV	ACGT	4 cut(s)	739, 1008, 1313, 1618
HpyF10VI	GCNNNNNNNGC	1 cut(s)	323
HpyF3I	CTNAG	2 cut(s)	357, 705
HpySE526I	ACGT	4 cut(s)	739, 1008, 1313, 1618
Hsp92II	CATG	8 cut(s)	34, 216, 273, 1369, 1420, 1508, 1705, 1910
HspAI	GCGC	1 cut(s)	169
Kpn2I	TCCGGA	1 cut(s)	1087
Ksp22I	TGATCA	1 cut(s)	94
KspAI	GTTAAC	1 cut(s)	529
Kzo9I	GATC	5 cut(s)	94, 141, 652, 935, 1153
LguI	GCTCTTC	1 cut(s)	1392
LmnI	GCTCC	4 cut(s)	323, 803, 853, 1060
Lsp1109I	GCAGC	2 cut(s)	94, 301
LweI	GCATC	3 cut(s)	1503, 1551, 1707
MaeI	CTAG	7 cut(s)	149, 308, 332, 726, 1052, 1539, 1794
MaeII	ACGT	4 cut(s)	739, 1008, 1313, 1618
MaeIII	GTNAC	5 cut(s)	496, 610, 709, 1009, 1475
MalI	GATC	5 cut(s)	96, 143, 654, 937, 1155
MbiI	CCGCTC	1 cut(s)	326
MboI	GATC	5 cut(s)	94, 141, 652, 935, 1153
MboII	GAAGA	8 cut(s)	286, 1175, 1269, 1379, 1589, 1615, 1672, 1871
MfeI	CAATTG	6 cut(s)	130, 1034, 1203, 1480, 1498, 1555
MflI	RGATCY	1 cut(s)	141
MhlI	GDGCHC	5 cut(s)	394, 486, 548, 725, 850
MlyI	GAGTC	1 cut(s)	938
MmeI	TCCRAC	2 cut(s)	343, 934
MroI	TCCGGA	1 cut(s)	1087
MroXI	GAANNNNTTC	1 cut(s)	1386
MseI	TTAA	2 cut(s)	528, 1785
MspA1I	CMGCKG	1 cut(s)	107
MspI	CCGG	6 cut(s)	119, 249, 353, 852, 1088, 1802
MspR9I	CCNGG	6 cut(s)	119, 353, 852, 928, 1758, 1803
MunI	CAATTG	6 cut(s)	130, 1034, 1203, 1480, 1498, 1555
Mva1269I	GAATGC	1 cut(s)	202
MvaI	CCWGG	2 cut(s)	928, 1758
MvnI	CGCG	1 cut(s)	169
MwoI	GCNNNNNNNGC	1 cut(s)	323
NciI	CCSGG	4 cut(s)	119, 353, 852, 1803
NcoI	CCATGG	1 cut(s)	1416
NdeI	CATATG	2 cut(s)	685, 1891
NdeII	GATC	5 cut(s)	94, 141, 652, 935, 1153
NheI	GCTAGC	1 cut(s)	1051
NlaIII	CATG	8 cut(s)	34, 216, 273, 1369, 1420, 1508, 1705, 1910
NlaIV	GGNNCC	3 cut(s)	391, 1651, 1755
NmuCI	GTSAC	4 cut(s)	496, 610, 709, 1475
NspI	RCATGY	1 cut(s)	1508
NspV	TTCGAA	1 cut(s)	1575
PasI	CCCWGGG	1 cut(s)	927
PceI	AGGCCT	1 cut(s)	1240
PciSI	GCTCTTC	1 cut(s)	1392
PctI	GAATGC	1 cut(s)	202
PdmI	GAANNNNTTC	1 cut(s)	1386
PfeI	GAWTC	7 cut(s)	304, 537, 595, 904, 1292, 1542, 1903
PflMI	CCANNNNNTGG	2 cut(s)	871, 1892
PfoI	TCCNGGA	2 cut(s)	850, 1756
PkrI	GCNGC	2 cut(s)	109, 316
PleI	GAGTC	1 cut(s)	938
PmaCI	CACGTG	1 cut(s)	1314
PmlI	CACGTG	1 cut(s)	1314
PpsI	GAGTC	1 cut(s)	938
Ppu21I	YACGTR	1 cut(s)	1314
Psp6I	CCWGG	2 cut(s)	926, 1756
PspCI	CACGTG	1 cut(s)	1314
PspFI	CCCAGC	1 cut(s)	762
PspGI	CCWGG	2 cut(s)	926, 1756
PspN4I	GGNNCC	3 cut(s)	391, 1651, 1755
PspPI	GGNCC	3 cut(s)	216, 745, 1650
PsuI	RGATCY	1 cut(s)	141
PvuII	CAGCTG	1 cut(s)	107
RsaI	GTAC	5 cut(s)	1082, 1330, 1395, 1798, 1948
RsaNI	GTAC	5 cut(s)	1081, 1329, 1394, 1797, 1947
SapI	GCTCTTC	1 cut(s)	1392
SaqAI	TTAA	2 cut(s)	528, 1785
SatI	GCNGC	2 cut(s)	108, 315
Sau3AI	GATC	5 cut(s)	94, 141, 652, 935, 1153
Sau96I	GGNCC	3 cut(s)	216, 745, 1650
ScaI	AGTACT	1 cut(s)	1948
SchI	GAGTC	1 cut(s)	938
ScrFI	CCNGG	6 cut(s)	119, 353, 852, 928, 1758, 1803
SduI	GDGCHC	5 cut(s)	394, 486, 548, 725, 850
SfaNI	GCATC	3 cut(s)	1503, 1551, 1707
SfuI	TTCGAA	1 cut(s)	1575
SinI	GGWCC	2 cut(s)	745, 1650
SmlI	CTYRAG	3 cut(s)	75, 191, 485
SmoI	CTYRAG	3 cut(s)	75, 191, 485
SseBI	AGGCCT	1 cut(s)	1240
SsiI	CCGC	4 cut(s)	326, 1134, 1421, 1590
SspMI	CTAG	7 cut(s)	149, 308, 332, 726, 1052, 1539, 1794
StuI	AGGCCT	1 cut(s)	1240
StyD4I	CCNGG	6 cut(s)	117, 351, 850, 926, 1756, 1801
StyI	CCWWGG	3 cut(s)	1416, 1687, 1749
TaaI	ACNGT	5 cut(s)	580, 625, 971, 1398, 1770
TaiI	ACGT	4 cut(s)	742, 1011, 1316, 1621
TaqI	TCGA	4 cut(s)	881, 1152, 1575, 1596
TatI	WGTACW	3 cut(s)	1328, 1796, 1946
TfiI	GAWTC	7 cut(s)	304, 537, 595, 904, 1292, 1542, 1903
Tru1I	TTAA	2 cut(s)	528, 1785
Tru9I	TTAA	2 cut(s)	528, 1785
TseFI	GTSAC	4 cut(s)	496, 610, 709, 1475
TseI	GCWGC	2 cut(s)	107, 314
Tsp45I	GTSAC	4 cut(s)	496, 610, 709, 1475
Van91I	CCANNNNNTGG	2 cut(s)	871, 1892
VpaK11BI	GGWCC	2 cut(s)	745, 1650
XapI	RAATTY	8 cut(s)	53, 444, 782, 1163, 1570, 1656, 1705, 1912
XceI	RCATGY	1 cut(s)	1508
XmnI	GAANNNNTTC	1 cut(s)	1386
XspI	CTAG	7 cut(s)	149, 308, 332, 726, 1052, 1539, 1794
ZrmI	AGTACT	1 cut(s)	1948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.