Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004050

Physical Location & Seq

Genomic Coordinates Forward (+)

15015688 .. 15020568

Gene Structure 4881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g21960.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGGAAACAAGTTCGAGCATGAAGATCCCATGGAGCTTGTTGTTTCTATTGTTTTTAGGGGTGTTTGCTGCTAGGGTTGAAGTTAGTTACGGACAAAAAGCAGCCAAACTAGGAGCAGGAGCAGGCGCCAGTGGAGGTGGCGACGACGGAGGGGACGGAGACAAGCCGGCTCCTCCGCCGGAGCAAGAAGACTGCGACGGCATCTTCTTGACCTACACGTTCATCTCGCGCGAGAAGGAATATCCGCGCAAGAAGAACGTGTCGGCGCAAGCGTGGGCGTTCACGTCGGAGGCGAGCATCTTGAACGCCGGGACCGAGACGCTCAAGGCTTGGAAGATGTACGTAGGGTTTCAGAATCGAGAGATATTGGTGTCGGCCGACGGGGCTGTGTTGGTGGACGGTAGTGATTTTCCAGCCTCCGTTGGGAAAAATGGGACGTACCTTTCAGGAGATCAACAAACCGACTTGAAGAACTCCGTCGATACGGCCGGGGATATCGAACAGATTCAGGCAAAGATTGCTTTCAAGGGAACACAGTTTGGCCTCCCGGCCAAGGCAGTACCCATGCCCAAGACCATTCGCCTCGTCAACGACGGATACAAGTGCCCTGCACCTCGTATTCGTGGAAAGACAAACATGTTCGTATGCTGTGTACCGGACCCAAAGTTCAAGGTGAAGAAAGACGATAAGGACTCCAAATTCTTGCCTAGACAGAATGGTGACCTCTCCATCACATACGATGTGCTGGATTCTTATTCAAACAACTATATGGCTCAAGTCACCATCGACAACTTGCACCCACTCGGCCGTCTTGACCACTGGAACTTAACCTGGGAATGGCAGAAGAACGAGTTCATCCAGACCATGAGAGGCGCCTATACTCACAAGAAGGACATGTCCGAGTGCCTCTACGGCCCGGCCGGAAAAGCATACAAGGACATGGACTTCTCTAAGGTCATGAACTGTGAAAAGAAGCCTACCATCACCGACCTCCCACCGACGATGAAGGATGACGAGAAGGTTGGAAAGCTGCCCAAGTGCTGTAGAAACGGCACCATCTTACCGACTATCATGAACGAGACGCAGTCACAGGCACAGTTCCAGCTCCAAGTCTTTAAGCTTCCACCTGATGATAATAGAACCGCTCTCACTCCACCACAGAAGTGGAGTATCTATGGCCCTGTGAACCCTAACTACGTATGTGGACCTCCGATCAGAGTCGCACCGACTCTGTTTCCCGACCCGAGCGGCCTCCAGTCTACGACAGCTGCAGTTGCATCTTGGCAAGTGGTATGTAACATAACCAAGCCAAAGGTGCCTCGCTGCTGCGTTTCGTTTTCCGGCTACTTCAGCGAGTCAATTGTGCCGTGCAACACTTGCGCTTGTGGCTGTAAAGAAGATGAGAACCCTAACTGCGACCCAAGAGCCAAGGCAATGCTTCTACCAGCAGAAGCACTCCTTGTGCCTTTCGCCAACAGAACTCAAAAGGCAAAAGCGTGGGCCAAAATCAAGCACTTTGACATACCCAAAAAGCTTCCATGCGGAGACAACTGTGGAGTTAGTCTCAACTGGCACATAGACTCGGACTACCAGAGTGGATGGACAGCTCGTCTAACTCTCTTTAACTGGGGGAAGGAACCATTTCAGGATTGGTTCACGGCAGTAGAAATGAACAAGGCTTTTCTAGACTATGAAAATGTGTACTCATTTAACGGAACGAGAATGGCCAAGCCGAAAAACACCATCTTGTTCCAGGGTCTGAAAGGTTTGAACTACTTGATAGAAATGAGAAATGCGACCAACCCAAAAGACCCTCGGGTACCCGGAAAGCAGCAGTCGGTTATTTCTTTCAAGAAGCACCACTATCATGGTATTAATATAAAGGCTGGTGAAGGTTTCCCATCAAGAGTCTTGTTCAATGGAGAGGAGTGCTCACTTCCTAAGCGATTCCCCAACGGCGCAGATCATCAGGCCAGTAGTAATGTCCTCCTCATCTTGTTCGTTGCAATTGCGAGTTTTGTGTTCATGACAGACCGCTTCCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020 GO:0031224 GO:0031225 GO:0044425

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COBRA

Protein Analysis

682

Amino Acids

75.61

Weight (kDa)

8.68

Isoelectric Point (pI)

31.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COBRA	PF04833	256 - 435	1.6e-63	COBRA-like protein
COB_C	PF25079	441 - 651	1.3e-95	COBRA family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20580 AT4G27110
fragaria_vesca	FvH4_3g02530 FvH4_3g21960 FvH4_3g21960
malus_domestica	MD03G1209900.v1.1 MD10G1315500.v1.1 MD11G1224600.v1.1
prunus_persica	Prupe.4G025000_v2.0.a1 Prupe.4G205300_v2.0.a1 Prupe.4G205300_v2.0.a1
pyrus_communis	pycom10g26780
rosa_chinensis	RchiOBHm_Chr5g0003851 RchiOBHm_Chr5g0037811
rosa_laevigata	RLG00000031181 RLG00000033811
rosa_multiflora	Rmu_sc0005416.1_g000009 Rmu_sc0006558.1_g000051
rosa_roxburghii	Rroxscaffold_1G00043110
rosa_rugosa	Rorug04G0407500 Rorug05G0167700 Rorug05G0167700 Rorug05G0167800
rosa_samantha	Rh5AG034700 Rh5AG256600 Rh5BG033100 Rh5BG259000 Rh5CG037100 Rh5CG292000 Rh5DG033400 Rh5DG268900
rosa_wichuraiana	Rw5G003180 Rw5G023790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1819
AccB1I	GGYRCC	5 cut(s)	125, 872, 1052, 1315, 1819
AccBSI	CCGCTC	2 cut(s)	1145, 1248
AccI	GTMKAC	1 cut(s)	1259
AccII	CGCG	3 cut(s)	229, 231, 247
AciI	CCGC	6 cut(s)	176, 245, 1143, 1248, 1542, 2035
AclWI	GGATC	1 cut(s)	19
AcoI	YGGCCR	6 cut(s)	375, 486, 549, 805, 918, 1725
AcsI	RAATTY	1 cut(s)	698
AcuI	CTGAAG	1 cut(s)	1333
AcyI	GRCGYC	2 cut(s)	126, 873
AfaI	GTAC	6 cut(s)	341, 440, 561, 654, 1703, 1821
AfiI	CCNNNNNNNGG	3 cut(s)	423, 553, 837
AflIII	ACRYGT	4 cut(s)	216, 258, 636, 894
AgsI	TTSAA	9 cut(s)	80, 304, 469, 526, 670, 759, 1771, 1852, 1918
AhdI	GACNNNNNGTC	1 cut(s)	1608
AjiI	CACGTC	1 cut(s)	285
AjnI	CCWGG	2 cut(s)	830, 1752
AleI	CACNNNNGTG	1 cut(s)	1162
AloI	GAACNNNNNNTCC	2 cut(s)	650, 682
AluBI	AGCT	7 cut(s)	36, 1030, 1105, 1120, 1268, 1534, 1607
AluI	AGCT	7 cut(s)	36, 1030, 1105, 1120, 1268, 1534, 1607
Alw21I	GWGCWC	1 cut(s)	1934
Alw26I	GTCTC	5 cut(s)	153, 311, 1073, 1539, 1568
AlwI	GGATC	1 cut(s)	19
AlwNI	CAGNNNCTG	1 cut(s)	1759
Ama87I	CYCGRG	2 cut(s)	1243, 1815
ApeKI	GCWGC	7 cut(s)	68, 101, 1030, 1268, 1323, 1326, 1831
ApoI	RAATTY	1 cut(s)	698
AseI	ATTAAT	1 cut(s)	1875
Asp700I	GAANNNNTTC	3 cut(s)	504, 851, 1641
Asp718I	GGTACC	1 cut(s)	1819
AspLEI	GCGC	7 cut(s)	128, 231, 249, 268, 875, 1382, 1961
AspS9I	GGNCC	6 cut(s)	312, 658, 914, 1178, 1205, 1500
AsuC2I	CCSGG	5 cut(s)	310, 490, 548, 917, 1824
AsuHPI	GGTGA	5 cut(s)	685, 731, 772, 976, 1901
AvaI	CYCGRG	2 cut(s)	1243, 1815
AvaII	GGWCC	3 cut(s)	312, 658, 1205
BaeGI	GKGCMC	1 cut(s)	608
BalI	TGGCCA	1 cut(s)	1727
BanI	GGYRCC	5 cut(s)	125, 872, 1052, 1315, 1819
BbsI	GAAGAC	1 cut(s)	195
Bbv12I	GWGCWC	1 cut(s)	1934
BbvI	GCAGC	7 cut(s)	55, 113, 1017, 1255, 1310, 1313, 1843
BccI	CCATC	7 cut(s)	737, 791, 989, 1064, 1593, 1751, 1909
BceAI	ACGGC	8 cut(s)	214, 501, 792, 928, 1066, 1351, 1674, 1972
BciT130I	CCWGG	2 cut(s)	832, 1754
BciVI	GTATCC	1 cut(s)	590
BcnI	CCSGG	5 cut(s)	310, 490, 548, 917, 1824
BcoDI	GTCTC	5 cut(s)	153, 311, 1073, 1539, 1568
BfaI	CTAG	4 cut(s)	72, 110, 708, 1685
BfmI	CTRYAG	2 cut(s)	1042, 1269
BfoI	RGCGCY	2 cut(s)	129, 876
BfuI	GTATCC	1 cut(s)	590
BglI	GCCNNNNNGGC	2 cut(s)	383, 912
BisI	GCNGC	8 cut(s)	69, 102, 1031, 1249, 1269, 1324, 1327, 1832
BlsI	GCNGC	8 cut(s)	70, 103, 1032, 1250, 1270, 1325, 1328, 1833
Bme1390I	CCNGG	7 cut(s)	310, 490, 548, 832, 917, 1754, 1824
Bme18I	GGWCC	3 cut(s)	312, 658, 1205
BmeRI	GACNNNNNGTC	1 cut(s)	1608
BmeT110I	CYCGRG	2 cut(s)	1243, 1815
BmgBI	CACGTC	1 cut(s)	285
BmgT120I	GGNCC	6 cut(s)	312, 658, 914, 1178, 1205, 1500
BmiI	GGNNCC	9 cut(s)	127, 171, 313, 660, 874, 1054, 1317, 1638, 1821
BmrFI	CCNGG	7 cut(s)	310, 490, 548, 832, 917, 1754, 1824
BmrI	ACTGGG	1 cut(s)	1636
BmsI	GCATC	3 cut(s)	210, 306, 1286
BmuI	ACTGGG	1 cut(s)	1636
BpiI	GAAGAC	1 cut(s)	195
BplI	GAGNNNNNCTC	4 cut(s)	1548, 1580, 1916, 1948
BpmI	CTGGAG	1 cut(s)	1238
Bpu10I	CCTNAGC	1 cut(s)	1941
BpuEI	CTTGAG	2 cut(s)	308, 759
BpuMI	CCSGG	5 cut(s)	310, 490, 548, 917, 1824
BsaAI	YACGTR	2 cut(s)	343, 1198
BsaHI	GRCGYC	2 cut(s)	126, 873
BsaJI	CCNNGG	7 cut(s)	29, 489, 552, 831, 1428, 1753, 1814
BsaWI	WCCGGW	1 cut(s)	655
Bsc4I	CCNNNNNNNGG	3 cut(s)	423, 553, 837
Bse118I	RCCGGY	1 cut(s)	166
Bse1I	ACTGG	6 cut(s)	129, 824, 1255, 1574, 1631, 1974
Bse3DI	GCAATG	1 cut(s)	1440
BseBI	CCWGG	2 cut(s)	832, 1754
BseDI	CCNNGG	7 cut(s)	29, 489, 552, 831, 1428, 1753, 1814
BseGI	GGATG	3 cut(s)	855, 1015, 1604
BseLI	CCNNNNNNNGG	3 cut(s)	423, 553, 837
BseMI	GCAATG	1 cut(s)	1440
BseNI	ACTGG	6 cut(s)	129, 824, 1255, 1574, 1631, 1974
BseRI	GAGGAG	3 cut(s)	162, 1940, 1979
BseSI	GKGCMC	1 cut(s)	608
BseX3I	CGGCCG	4 cut(s)	375, 486, 805, 918
BseXI	GCAGC	7 cut(s)	55, 113, 1017, 1255, 1310, 1313, 1843
BsgI	GTGCAG	1 cut(s)	594
Bsh1236I	CGCG	3 cut(s)	229, 231, 247
Bsh1285I	CGRYCG	4 cut(s)	378, 489, 808, 921
BshNI	GGYRCC	5 cut(s)	125, 872, 1052, 1315, 1819
BsiEI	CGRYCG	4 cut(s)	378, 489, 808, 921
BsiHKAI	GWGCWC	1 cut(s)	1934
BsiHKCI	CYCGRG	2 cut(s)	1243, 1815
BslFI	GGGAC	3 cut(s)	167, 325, 448
BslI	CCNNNNNNNGG	3 cut(s)	423, 553, 837
BsmAI	GTCTC	5 cut(s)	153, 311, 1073, 1539, 1568
BsmBI	CGTCTC	2 cut(s)	311, 1073
BsmFI	GGGAC	3 cut(s)	167, 325, 448
BsoBI	CYCGRG	2 cut(s)	1243, 1815
Bsp1286I	GDGCHC	2 cut(s)	608, 1934
Bsp143I	GATC	4 cut(s)	24, 451, 1212, 1963
Bsp19I	CCATGG	1 cut(s)	29
BspACI	CCGC	6 cut(s)	176, 245, 1143, 1248, 1542, 2035
BspFNI	CGCG	3 cut(s)	229, 231, 247
BspHI	TCATGA	3 cut(s)	957, 1071, 2025
BspLI	GGNNCC	9 cut(s)	127, 171, 313, 660, 874, 1054, 1317, 1638, 1821
BspMAI	CTGCAG	1 cut(s)	1273
BspPI	GGATC	1 cut(s)	19
BspT107I	GGYRCC	5 cut(s)	125, 872, 1052, 1315, 1819
BsrBI	CCGCTC	2 cut(s)	1145, 1248
BsrDI	GCAATG	1 cut(s)	1440
BsrFI	RCCGGY	1 cut(s)	166
BsrI	ACTGG	6 cut(s)	129, 824, 1255, 1574, 1631, 1974
BssAI	RCCGGY	1 cut(s)	166
BssECI	CCNNGG	7 cut(s)	29, 489, 552, 831, 1428, 1753, 1814
BssMI	GATC	4 cut(s)	24, 451, 1212, 1963
BssNI	GRCGYC	2 cut(s)	126, 873
BssT1I	CCWWGG	3 cut(s)	29, 552, 1428
Bst2UI	CCWGG	2 cut(s)	832, 1754
Bst4CI	ACNGT	5 cut(s)	401, 537, 965, 1098, 1553
BstACI	GRCGYC	2 cut(s)	126, 873
BstAPI	GCANNNNNTGC	2 cut(s)	518, 1377
BstBAI	YACGTR	2 cut(s)	343, 1198
BstC8I	GCNNGC	4 cut(s)	124, 168, 270, 295
BstDEI	CTNAG	2 cut(s)	951, 1941
BstDSI	CCRYGG	1 cut(s)	29
BstEII	GGTNACC	1 cut(s)	719
BstF5I	GGATG	3 cut(s)	855, 1015, 1604
BstFNI	CGCG	3 cut(s)	229, 231, 247
BstH2I	RGCGCY	2 cut(s)	129, 876
BstHHI	GCGC	7 cut(s)	128, 231, 249, 268, 875, 1382, 1961
BstKTI	GATC	4 cut(s)	27, 454, 1215, 1966
BstMAI	GTCTC	5 cut(s)	153, 311, 1073, 1539, 1568
BstMBI	GATC	4 cut(s)	24, 451, 1212, 1963
BstMCI	CGRYCG	4 cut(s)	378, 489, 808, 921
BstMWI	GCNNNNNNNGC	9 cut(s)	383, 518, 912, 926, 1274, 1315, 1350, 1377, 1386
BstNI	CCWGG	2 cut(s)	832, 1754
BstNSI	RCATGY	2 cut(s)	640, 898
BstPI	GGTNACC	1 cut(s)	719
BstSCI	CCNGG	7 cut(s)	308, 488, 546, 830, 915, 1752, 1822
BstSFI	CTRYAG	2 cut(s)	1042, 1269
BstSLI	GKGCMC	1 cut(s)	608
BstSNI	TACGTA	2 cut(s)	343, 1198
BstUI	CGCG	3 cut(s)	229, 231, 247
BstV1I	GCAGC	7 cut(s)	55, 113, 1017, 1255, 1310, 1313, 1843
BstV2I	GAAGAC	1 cut(s)	195
BstX2I	RGATCY	1 cut(s)	24
BstXI	CCANNNNNNTGG	2 cut(s)	1164, 1868
BstYI	RGATCY	1 cut(s)	24
BstZI	CGGCCG	4 cut(s)	375, 486, 805, 918
BsuI	GTATCC	1 cut(s)	590
BtgI	CCRYGG	1 cut(s)	29
BtrI	CACGTC	1 cut(s)	285
BtsCI	GGATG	3 cut(s)	855, 1015, 1604
BtsIMutI	CAGTG	3 cut(s)	136, 817, 2041
Cac8I	GCNNGC	4 cut(s)	124, 168, 270, 295
CaiI	CAGNNNCTG	1 cut(s)	1759
CciI	TCATGA	3 cut(s)	957, 1071, 2025
CfoI	GCGC	7 cut(s)	128, 231, 249, 268, 875, 1382, 1961
Cfr10I	RCCGGY	1 cut(s)	166
Cfr13I	GGNCC	6 cut(s)	312, 658, 914, 1178, 1205, 1500
CseI	GACGC	2 cut(s)	328, 1090
Csp6I	GTAC	6 cut(s)	340, 439, 560, 653, 1702, 1820
CviQI	GTAC	6 cut(s)	340, 439, 560, 653, 1702, 1820
DdeI	CTNAG	2 cut(s)	951, 1941
DinI	GGCGCC	2 cut(s)	127, 874
DpnI	GATC	4 cut(s)	26, 453, 1214, 1965
DpnII	GATC	4 cut(s)	24, 451, 1212, 1963
DriI	GACNNNNNGTC	1 cut(s)	1608
EaeI	YGGCCR	6 cut(s)	375, 486, 549, 805, 918, 1725
EagI	CGGCCG	4 cut(s)	375, 486, 805, 918
Eam1105I	GACNNNNNGTC	1 cut(s)	1608
EciI	GGCGGA	1 cut(s)	165
EclXI	CGGCCG	4 cut(s)	375, 486, 805, 918
Eco105I	TACGTA	2 cut(s)	343, 1198
Eco130I	CCWWGG	3 cut(s)	29, 552, 1428
Eco32I	GATATC	1 cut(s)	496
Eco47I	GGWCC	3 cut(s)	312, 658, 1205
Eco52I	CGGCCG	4 cut(s)	375, 486, 805, 918
Eco57I	CTGAAG	1 cut(s)	1333
Eco88I	CYCGRG	2 cut(s)	1243, 1815
Eco91I	GGTNACC	1 cut(s)	719
EcoO65I	GGTNACC	1 cut(s)	719
EcoRII	CCWGG	2 cut(s)	830, 1752
EcoRV	GATATC	1 cut(s)	496
EcoT14I	CCWWGG	3 cut(s)	29, 552, 1428
EgeI	GGCGCC	2 cut(s)	127, 874
EheI	GGCGCC	2 cut(s)	127, 874
ErhI	CCWWGG	3 cut(s)	29, 552, 1428
Esp3I	CGTCTC	2 cut(s)	311, 1073
FalI	AAGNNNNNCTT	2 cut(s)	1443, 1475
FaqI	GGGAC	3 cut(s)	167, 325, 448
FblI	GTMKAC	1 cut(s)	1259
Fnu4HI	GCNGC	8 cut(s)	69, 102, 1031, 1249, 1269, 1324, 1327, 1832
FokI	GGATG	3 cut(s)	842, 1022, 1611
Fsp4HI	GCNGC	8 cut(s)	69, 102, 1031, 1249, 1269, 1324, 1327, 1832
FspBI	CTAG	4 cut(s)	72, 110, 708, 1685
GlaI	GCGC	7 cut(s)	127, 230, 248, 267, 874, 1381, 1960
GluI	GCNGC	8 cut(s)	69, 102, 1031, 1249, 1269, 1324, 1327, 1832
GsuI	CTGGAG	1 cut(s)	1238
HaeII	RGCGCY	2 cut(s)	129, 876
HgaI	GACGC	2 cut(s)	328, 1090
HhaI	GCGC	7 cut(s)	128, 231, 249, 268, 875, 1382, 1961
Hin1I	GRCGYC	2 cut(s)	126, 873
Hin6I	GCGC	7 cut(s)	126, 229, 247, 266, 873, 1380, 1959
HinP1I	GCGC	7 cut(s)	126, 229, 247, 266, 873, 1380, 1959
HincII	GTYRAC	1 cut(s)	589
HindII	GTYRAC	1 cut(s)	589
HindIII	AAGCTT	2 cut(s)	1118, 1532
HphI	GGTGA	5 cut(s)	685, 731, 772, 976, 1901
Hpy166II	GTNNAC	9 cut(s)	282, 397, 589, 653, 1186, 1205, 1260, 1656, 1702
Hpy188I	TCNGA	7 cut(s)	289, 354, 901, 1212, 1217, 1585, 1761
Hpy8I	GTNNAC	9 cut(s)	282, 397, 589, 653, 1186, 1205, 1260, 1656, 1702
Hpy99I	CGWCG	8 cut(s)	146, 149, 200, 289, 383, 482, 596, 1003
HpyAV	CCTTC	6 cut(s)	229, 883, 1000, 1012, 1627, 1886
HpyCH4III	ACNGT	5 cut(s)	401, 537, 965, 1098, 1553
HpyCH4IV	ACGT	6 cut(s)	218, 258, 284, 342, 437, 1197
HpyCH4V	TGCA	6 cut(s)	611, 796, 1271, 1277, 1371, 2006
HpyF10VI	GCNNNNNNNGC	9 cut(s)	383, 518, 912, 926, 1274, 1315, 1350, 1377, 1386
HpyF3I	CTNAG	2 cut(s)	951, 1941
HpySE526I	ACGT	6 cut(s)	218, 258, 284, 342, 437, 1197
Hsp92I	GRCGYC	2 cut(s)	126, 873
HspAI	GCGC	7 cut(s)	126, 229, 247, 266, 873, 1380, 1959
KasI	GGCGCC	2 cut(s)	125, 872
KpnI	GGTACC	1 cut(s)	1823
KroI	GCCGGC	1 cut(s)	166
KroNI	GCCGGC	1 cut(s)	168
Kzo9I	GATC	4 cut(s)	24, 451, 1212, 1963
LmnI	GCTCC	6 cut(s)	33, 113, 119, 175, 181, 1110
Lsp1109I	GCAGC	7 cut(s)	55, 113, 1017, 1255, 1310, 1313, 1843
LweI	GCATC	3 cut(s)	210, 306, 1286
MaeI	CTAG	4 cut(s)	72, 110, 708, 1685
MaeII	ACGT	6 cut(s)	218, 258, 284, 342, 437, 1197
MaeIII	GTNAC	5 cut(s)	86, 719, 778, 1086, 1295
MalI	GATC	4 cut(s)	26, 453, 1214, 1965
MbiI	CCGCTC	2 cut(s)	1145, 1248
MboI	GATC	4 cut(s)	24, 451, 1212, 1963
MboII	GAAGA	9 cut(s)	34, 196, 200, 265, 346, 481, 688, 856, 1409
MfeI	CAATTG	2 cut(s)	1359, 2007
MflI	RGATCY	1 cut(s)	24
MhlI	GDGCHC	2 cut(s)	608, 1934
MlsI	TGGCCA	1 cut(s)	1727
MluCI	AATT	3 cut(s)	698, 1359, 2007
MluNI	TGGCCA	1 cut(s)	1727
Mly113I	GGCGCC	2 cut(s)	126, 873
MlyI	GAGTC	6 cut(s)	686, 1222, 1227, 1364, 1574, 1917
MmeI	TCCRAC	2 cut(s)	267, 1003
Mox20I	TGGCCA	1 cut(s)	1727
MroNI	GCCGGC	1 cut(s)	166
MroXI	GAANNNNTTC	3 cut(s)	504, 851, 1641
MscI	TGGCCA	1 cut(s)	1727
MseI	TTAA	5 cut(s)	827, 1116, 1623, 1710, 1875
MslI	CAYNNNNRTG	2 cut(s)	1162, 1866
Msp20I	TGGCCA	1 cut(s)	1727
MspA1I	CMGCKG	1 cut(s)	1268
MspR9I	CCNGG	7 cut(s)	310, 490, 548, 832, 917, 1754, 1824
MunI	CAATTG	2 cut(s)	1359, 2007
MvaI	CCWGG	2 cut(s)	832, 1754
MvnI	CGCG	3 cut(s)	229, 231, 247
MwoI	GCNNNNNNNGC	9 cut(s)	383, 518, 912, 926, 1274, 1315, 1350, 1377, 1386
NaeI	GCCGGC	1 cut(s)	168
NarI	GGCGCC	2 cut(s)	126, 873
NciI	CCSGG	5 cut(s)	310, 490, 548, 917, 1824
NcoI	CCATGG	1 cut(s)	29
NdeII	GATC	4 cut(s)	24, 451, 1212, 1963
NgoMIV	GCCGGC	1 cut(s)	166
NlaIV	GGNNCC	9 cut(s)	127, 171, 313, 660, 874, 1054, 1317, 1638, 1821
NmeAIII	GCCGAG	1 cut(s)	783
NmuCI	GTSAC	3 cut(s)	719, 778, 1086
NspI	RCATGY	2 cut(s)	640, 898
OliI	CACNNNNGTG	1 cut(s)	1162
PagI	TCATGA	3 cut(s)	957, 1071, 2025
PciI	ACATGT	2 cut(s)	636, 894
PcsI	WCGNNNNNNNCGW	3 cut(s)	269, 290, 312
PdiI	GCCGGC	1 cut(s)	168
PdmI	GAANNNNTTC	3 cut(s)	504, 851, 1641
PfeI	GAWTC	4 cut(s)	355, 505, 749, 1947
PflFI	GACNNNGTC	1 cut(s)	1084
PkrI	GCNGC	8 cut(s)	70, 103, 1032, 1250, 1270, 1325, 1328, 1833
PleI	GAGTC	6 cut(s)	686, 1222, 1226, 1363, 1574, 1916
PluTI	GGCGCC	2 cut(s)	129, 876
PpsI	GAGTC	6 cut(s)	686, 1222, 1226, 1363, 1574, 1916
Ppu21I	YACGTR	2 cut(s)	343, 1198
PscI	ACATGT	2 cut(s)	636, 894
PshBI	ATTAAT	1 cut(s)	1875
Psp6I	CCWGG	2 cut(s)	830, 1752
PspEI	GGTNACC	1 cut(s)	719
PspGI	CCWGG	2 cut(s)	830, 1752
PspN4I	GGNNCC	9 cut(s)	127, 171, 313, 660, 874, 1054, 1317, 1638, 1821
PspPI	GGNCC	6 cut(s)	312, 658, 914, 1178, 1205, 1500
PsrI	GAACNNNNNNTAC	2 cut(s)	1178, 1210
PstI	CTGCAG	1 cut(s)	1273
PstNI	CAGNNNCTG	1 cut(s)	1759
PsuI	RGATCY	1 cut(s)	24
PsyI	GACNNNGTC	1 cut(s)	1084
PvuII	CAGCTG	1 cut(s)	1268
RsaI	GTAC	6 cut(s)	341, 440, 561, 654, 1703, 1821
RsaNI	GTAC	6 cut(s)	340, 439, 560, 653, 1702, 1820
RseI	CAYNNNNRTG	2 cut(s)	1162, 1866
SaqAI	TTAA	5 cut(s)	827, 1116, 1623, 1710, 1875
SatI	GCNGC	8 cut(s)	69, 102, 1031, 1249, 1269, 1324, 1327, 1832
Sau3AI	GATC	4 cut(s)	24, 451, 1212, 1963
Sau96I	GGNCC	6 cut(s)	312, 658, 914, 1178, 1205, 1500
SchI	GAGTC	6 cut(s)	686, 1222, 1227, 1364, 1574, 1917
ScrFI	CCNGG	7 cut(s)	310, 490, 548, 832, 917, 1754, 1824
SduI	GDGCHC	2 cut(s)	608, 1934
SfaNI	GCATC	3 cut(s)	210, 306, 1286
SfcI	CTRYAG	2 cut(s)	1042, 1269
SfoI	GGCGCC	2 cut(s)	127, 874
SinI	GGWCC	3 cut(s)	312, 658, 1205
SmiMI	CAYNNNNRTG	2 cut(s)	1162, 1866
SmlI	CTYRAG	2 cut(s)	323, 774
SmoI	CTYRAG	2 cut(s)	323, 774
SnaBI	TACGTA	2 cut(s)	343, 1198
Sse9I	AATT	3 cut(s)	698, 1359, 2007
SsiI	CCGC	6 cut(s)	176, 245, 1143, 1248, 1542, 2035
SspDI	GGCGCC	2 cut(s)	125, 872
SspMI	CTAG	4 cut(s)	72, 110, 708, 1685
StyD4I	CCNGG	7 cut(s)	308, 488, 546, 830, 915, 1752, 1822
StyI	CCWWGG	3 cut(s)	29, 552, 1428
TaaI	ACNGT	5 cut(s)	401, 537, 965, 1098, 1553
TaiI	ACGT	6 cut(s)	221, 261, 287, 345, 440, 1200
TaqI	TCGA	5 cut(s)	14, 358, 480, 498, 786
TaqII	GACCGA	1 cut(s)	329
TasI	AATT	3 cut(s)	698, 1359, 2007
TatI	WGTACW	1 cut(s)	1701
TauI	GCSGC	1 cut(s)	1251
TfiI	GAWTC	4 cut(s)	355, 505, 749, 1947
Tru1I	TTAA	5 cut(s)	827, 1116, 1623, 1710, 1875
Tru9I	TTAA	5 cut(s)	827, 1116, 1623, 1710, 1875
TscAI	CASTG	2 cut(s)	136, 824
TseFI	GTSAC	3 cut(s)	719, 778, 1086
TseI	GCWGC	7 cut(s)	68, 101, 1030, 1268, 1323, 1326, 1831
Tsp45I	GTSAC	3 cut(s)	719, 778, 1086
TspDTI	ATGAA	9 cut(s)	35, 211, 844, 974, 1019, 1088, 1685, 1707, 2014
TspGWI	ACGGA	7 cut(s)	105, 162, 171, 409, 466, 609, 1728
TspRI	CASTG	2 cut(s)	136, 824
Tth111I	GACNNNGTC	1 cut(s)	1084
VpaK11BI	GGWCC	3 cut(s)	312, 658, 1205
VspI	ATTAAT	1 cut(s)	1875
XapI	RAATTY	1 cut(s)	698
XbaI	TCTAGA	1 cut(s)	1684
XceI	RCATGY	2 cut(s)	640, 898
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1161, 1647
XmiI	GTMKAC	1 cut(s)	1259
XmnI	GAANNNNTTC	3 cut(s)	504, 851, 1641
XspI	CTAG	4 cut(s)	72, 110, 708, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.