COBRA-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20580 AT4G27110 |
| fragaria_vesca | FvH4_3g02530 FvH4_3g21960 FvH4_3g21960 |
| malus_domestica | MD03G1209900.v1.1 MD10G1315500.v1.1 MD11G1224600.v1.1 |
| prunus_persica | Prupe.4G025000_v2.0.a1 Prupe.4G205300_v2.0.a1 Prupe.4G205300_v2.0.a1 |
| pyrus_communis | pycom10g26780 |
| rosa_chinensis | RchiOBHm_Chr5g0003851 RchiOBHm_Chr5g0037811 |
| rosa_laevigata | RLG00000031181 RLG00000033811 |
| rosa_multiflora | Rmu_sc0005416.1_g000009 Rmu_sc0006558.1_g000051 |
| rosa_roxburghii | Rroxscaffold_1G00043110 |
| rosa_rugosa | Rorug04G0407500 Rorug05G0167700 Rorug05G0167700 Rorug05G0167800 |
| rosa_samantha | Rh5AG034700 Rh5AG256600 Rh5BG033100 Rh5BG259000 Rh5CG037100 Rh5CG292000 Rh5DG033400 Rh5DG268900 |
| rosa_wichuraiana | Rw5G003180 Rw5G023790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1030 |
| Acc36I | ACCTGC | 1 cut(s) | 1030 |
| Acc65I | GGTACC | 1 cut(s) | 1753 |
| AccB1I | GGYRCC | 2 cut(s) | 470, 1753 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1428 |
| AccBSI | CCGCTC | 1 cut(s) | 1076 |
| AccII | CGCG | 1 cut(s) | 814 |
| AciI | CCGC | 4 cut(s) | 234, 812, 1074, 1614 |
| AclWI | GGATC | 4 cut(s) | 397, 1148, 1294, 1739 |
| AcsI | RAATTY | 6 cut(s) | 444, 456, 782, 1653, 1702, 1915 |
| AcuI | CTGAAG | 1 cut(s) | 1169 |
| AfaI | GTAC | 3 cut(s) | 817, 1634, 1755 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 706, 768, 914, 1039, 1248, 1428 |
| AflIII | ACRYGT | 1 cut(s) | 1313 |
| AjnI | CCWGG | 4 cut(s) | 272, 761, 1247, 1756 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 446, 478, 1013, 1045 |
| Alw21I | GWGCWC | 3 cut(s) | 76, 267, 1116 |
| Alw26I | GTCTC | 1 cut(s) | 912 |
| AlwI | GGATC | 4 cut(s) | 397, 1148, 1294, 1739 |
| AoxI | GGCC | 5 cut(s) | 219, 270, 609, 1239, 1419 |
| ApeKI | GCWGC | 4 cut(s) | 110, 726, 972, 1597 |
| ApoI | RAATTY | 6 cut(s) | 444, 456, 782, 1653, 1702, 1915 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1386 |
| Asp718I | GGTACC | 1 cut(s) | 1753 |
| AspLEI | GCGC | 2 cut(s) | 177, 806 |
| AspS9I | GGNCC | 6 cut(s) | 219, 499, 745, 1006, 1239, 1647 |
| AsuC2I | CCSGG | 1 cut(s) | 356 |
| AsuHPI | GGTGA | 6 cut(s) | 356, 543, 662, 721, 857, 1487 |
| AsuII | TTCGAA | 1 cut(s) | 165 |
| AvaII | GGWCC | 4 cut(s) | 499, 745, 1006, 1647 |
| BaeGI | GKGCMC | 2 cut(s) | 548, 1458 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 936, 969 |
| BanI | GGYRCC | 2 cut(s) | 470, 1753 |
| BanII | GRGCYC | 2 cut(s) | 76, 267 |
| BbsI | GAAGAC | 2 cut(s) | 1175, 1898 |
| Bbv12I | GWGCWC | 3 cut(s) | 76, 267, 1116 |
| BbvI | GCAGC | 4 cut(s) | 97, 738, 959, 1609 |
| BceAI | ACGGC | 2 cut(s) | 536, 1577 |
| BciT130I | CCWGG | 4 cut(s) | 274, 763, 1249, 1758 |
| BciVI | GTATCC | 2 cut(s) | 530, 1092 |
| BcnI | CCSGG | 1 cut(s) | 356 |
| BcoDI | GTCTC | 1 cut(s) | 912 |
| BfaI | CTAG | 3 cut(s) | 311, 927, 1539 |
| BfmI | CTRYAG | 3 cut(s) | 426, 724, 973 |
| BfoI | RGCGCY | 1 cut(s) | 807 |
| BfuAI | ACCTGC | 1 cut(s) | 1030 |
| BfuI | GTATCC | 2 cut(s) | 530, 1092 |
| BisI | GCNGC | 4 cut(s) | 111, 727, 973, 1598 |
| BlpI | GCTNAGC | 1 cut(s) | 1198 |
| BlsI | GCNGC | 4 cut(s) | 112, 728, 974, 1599 |
| Bme1390I | CCNGG | 5 cut(s) | 274, 356, 763, 1249, 1758 |
| Bme18I | GGWCC | 4 cut(s) | 499, 745, 1006, 1647 |
| BmgT120I | GGNCC | 6 cut(s) | 219, 499, 745, 1006, 1239, 1647 |
| BmiI | GGNNCC | 6 cut(s) | 472, 500, 501, 596, 1648, 1755 |
| BmrFI | CCNGG | 5 cut(s) | 274, 356, 763, 1249, 1758 |
| BmsI | GCATC | 2 cut(s) | 838, 1513 |
| BpiI | GAAGAC | 2 cut(s) | 1175, 1898 |
| BpmI | CTGGAG | 1 cut(s) | 1362 |
| Bpu10I | CCTNAGC | 1 cut(s) | 705 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1198 |
| Bpu14I | TTCGAA | 1 cut(s) | 165 |
| BpuEI | CTTGAG | 5 cut(s) | 60, 179, 251, 933, 1586 |
| BpuMI | CCSGG | 1 cut(s) | 356 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1065 |
| BsaI | GGTCTC | 1 cut(s) | 912 |
| BsaJI | CCNNGG | 5 cut(s) | 638, 762, 882, 1684, 1749 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 706, 768, 914, 1039, 1248, 1428 |
| Bse1I | ACTGG | 1 cut(s) | 328 |
| Bse3DI | GCAATG | 1 cut(s) | 1203 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1065 |
| BseBI | CCWGG | 4 cut(s) | 274, 763, 1249, 1758 |
| BseDI | CCNNGG | 5 cut(s) | 638, 762, 882, 1684, 1749 |
| BseGI | GGATG | 3 cut(s) | 777, 1111, 1531 |
| BseJI | GATNNNNATC | 1 cut(s) | 1065 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 706, 768, 914, 1039, 1248, 1428 |
| BseMI | GCAATG | 1 cut(s) | 1203 |
| BseMII | CTCAG | 3 cut(s) | 719, 1730, 1937 |
| BseNI | ACTGG | 1 cut(s) | 328 |
| BseRI | GAGGAG | 1 cut(s) | 108 |
| BseSI | GKGCMC | 2 cut(s) | 548, 1458 |
| BseXI | GCAGC | 4 cut(s) | 97, 738, 959, 1609 |
| BseYI | CCCAGC | 1 cut(s) | 121 |
| BsgI | GTGCAG | 2 cut(s) | 96, 1616 |
| Bsh1236I | CGCG | 1 cut(s) | 814 |
| BshFI | GGCC | 5 cut(s) | 221, 272, 611, 1241, 1421 |
| BshNI | GGYRCC | 2 cut(s) | 470, 1753 |
| BsiHKAI | GWGCWC | 3 cut(s) | 76, 267, 1116 |
| BsiSI | CCGG | 2 cut(s) | 356, 1736 |
| BsiWI | CGTACG | 1 cut(s) | 815 |
| BslFI | GGGAC | 5 cut(s) | 388, 485, 750, 1574, 1660 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 706, 768, 914, 1039, 1248, 1428 |
| BsmAI | GTCTC | 1 cut(s) | 912 |
| BsmFI | GGGAC | 5 cut(s) | 388, 485, 750, 1574, 1660 |
| BsmI | GAATGC | 1 cut(s) | 205 |
| BsnI | GGCC | 5 cut(s) | 221, 272, 611, 1241, 1421 |
| Bso31I | GGTCTC | 1 cut(s) | 912 |
| Bsp119I | TTCGAA | 1 cut(s) | 165 |
| Bsp1286I | GDGCHC | 5 cut(s) | 76, 267, 548, 1116, 1458 |
| Bsp143I | GATC | 7 cut(s) | 97, 389, 652, 909, 1153, 1299, 1744 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1198 |
| BspACI | CCGC | 4 cut(s) | 234, 812, 1074, 1614 |
| BspANI | GGCC | 5 cut(s) | 221, 272, 611, 1241, 1421 |
| BspCNI | CTCAG | 3 cut(s) | 718, 1729, 1938 |
| BspFNI | CGCG | 1 cut(s) | 814 |
| BspLI | GGNNCC | 6 cut(s) | 472, 500, 501, 596, 1648, 1755 |
| BspMAI | CTGCAG | 3 cut(s) | 430, 728, 977 |
| BspMI | ACCTGC | 1 cut(s) | 1030 |
| BspPI | GGATC | 4 cut(s) | 397, 1148, 1294, 1739 |
| BspT104I | TTCGAA | 1 cut(s) | 165 |
| BspT107I | GGYRCC | 2 cut(s) | 470, 1753 |
| BspTNI | GGTCTC | 1 cut(s) | 912 |
| BsrBI | CCGCTC | 1 cut(s) | 1076 |
| BsrDI | GCAATG | 1 cut(s) | 1203 |
| BsrI | ACTGG | 1 cut(s) | 328 |
| BssECI | CCNNGG | 5 cut(s) | 638, 762, 882, 1684, 1749 |
| BssMI | GATC | 7 cut(s) | 97, 389, 652, 909, 1153, 1299, 1744 |
| BssT1I | CCWWGG | 3 cut(s) | 882, 1684, 1749 |
| Bst2UI | CCWGG | 4 cut(s) | 274, 763, 1249, 1758 |
| Bst4CI | ACNGT | 3 cut(s) | 344, 896, 1904 |
| Bst6I | CTCTTC | 1 cut(s) | 1875 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 326 |
| BstBI | TTCGAA | 1 cut(s) | 165 |
| BstC8I | GCNNGC | 4 cut(s) | 213, 1210, 1214, 1435 |
| BstDEI | CTNAG | 4 cut(s) | 705, 1198, 1716, 1946 |
| BstEII | GGTNACC | 1 cut(s) | 1475 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 704 |
| BstF5I | GGATG | 3 cut(s) | 777, 1111, 1531 |
| BstFNI | CGCG | 1 cut(s) | 814 |
| BstH2I | RGCGCY | 1 cut(s) | 807 |
| BstHHI | GCGC | 2 cut(s) | 177, 806 |
| BstKTI | GATC | 7 cut(s) | 100, 392, 655, 912, 1156, 1302, 1747 |
| BstMAI | GTCTC | 1 cut(s) | 912 |
| BstMBI | GATC | 7 cut(s) | 97, 389, 652, 909, 1153, 1299, 1744 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 326, 1695 |
| BstNI | CCWGG | 4 cut(s) | 274, 763, 1249, 1758 |
| BstNSI | RCATGY | 1 cut(s) | 1317 |
| BstPI | GGTNACC | 1 cut(s) | 1475 |
| BstSCI | CCNGG | 5 cut(s) | 272, 354, 761, 1247, 1756 |
| BstSFI | CTRYAG | 3 cut(s) | 426, 724, 973 |
| BstSLI | GKGCMC | 2 cut(s) | 548, 1458 |
| BstUI | CGCG | 1 cut(s) | 814 |
| BstV1I | GCAGC | 4 cut(s) | 97, 738, 959, 1609 |
| BstV2I | GAAGAC | 2 cut(s) | 1175, 1898 |
| BstX2I | RGATCY | 2 cut(s) | 1153, 1744 |
| BstYI | RGATCY | 2 cut(s) | 1153, 1744 |
| BsuI | GTATCC | 2 cut(s) | 530, 1092 |
| BsuRI | GGCC | 5 cut(s) | 221, 272, 611, 1241, 1421 |
| BtgZI | GCGATG | 2 cut(s) | 102, 1408 |
| BtsCI | GGATG | 3 cut(s) | 777, 1111, 1531 |
| BtsI | GCAGTG | 3 cut(s) | 423, 1336, 1463 |
| BtsIMutI | CAGTG | 4 cut(s) | 423, 472, 1336, 1463 |
| BveI | ACCTGC | 1 cut(s) | 1030 |
| Cac8I | GCNNGC | 4 cut(s) | 213, 1210, 1214, 1435 |
| CfoI | GCGC | 2 cut(s) | 177, 806 |
| Cfr13I | GGNCC | 6 cut(s) | 219, 499, 745, 1006, 1239, 1647 |
| Csp6I | GTAC | 3 cut(s) | 816, 1633, 1754 |
| CviQI | GTAC | 3 cut(s) | 816, 1633, 1754 |
| DdeI | CTNAG | 4 cut(s) | 705, 1198, 1716, 1946 |
| DpnI | GATC | 7 cut(s) | 99, 391, 654, 911, 1155, 1301, 1746 |
| DpnII | GATC | 7 cut(s) | 97, 389, 652, 909, 1153, 1299, 1744 |
| DraI | TTTAAA | 2 cut(s) | 1099, 1786 |
| Eam1104I | CTCTTC | 1 cut(s) | 1875 |
| EarI | CTCTTC | 1 cut(s) | 1875 |
| Ecl136II | GAGCTC | 2 cut(s) | 74, 265 |
| Eco130I | CCWWGG | 3 cut(s) | 882, 1684, 1749 |
| Eco147I | AGGCCT | 1 cut(s) | 272 |
| Eco24I | GRGCYC | 2 cut(s) | 76, 267 |
| Eco31I | GGTCTC | 1 cut(s) | 912 |
| Eco47I | GGWCC | 4 cut(s) | 499, 745, 1006, 1647 |
| Eco53kI | GAGCTC | 2 cut(s) | 74, 265 |
| Eco57I | CTGAAG | 1 cut(s) | 1169 |
| Eco91I | GGTNACC | 1 cut(s) | 1475 |
| EcoICRI | GAGCTC | 2 cut(s) | 74, 265 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 704 |
| EcoO109I | RGGNCCY | 1 cut(s) | 499 |
| EcoO65I | GGTNACC | 1 cut(s) | 1475 |
| EcoRI | GAATTC | 1 cut(s) | 782 |
| EcoRII | CCWGG | 4 cut(s) | 272, 761, 1247, 1756 |
| EcoT14I | CCWWGG | 3 cut(s) | 882, 1684, 1749 |
| EcoT38I | GRGCYC | 2 cut(s) | 76, 267 |
| ErhI | CCWWGG | 3 cut(s) | 882, 1684, 1749 |
| FaqI | GGGAC | 5 cut(s) | 388, 485, 750, 1574, 1660 |
| FauNDI | CATATG | 1 cut(s) | 667 |
| Fnu4HI | GCNGC | 4 cut(s) | 111, 727, 973, 1598 |
| FokI | GGATG | 3 cut(s) | 784, 1118, 1538 |
| FriOI | GRGCYC | 2 cut(s) | 76, 267 |
| Fsp4HI | GCNGC | 4 cut(s) | 111, 727, 973, 1598 |
| FspBI | CTAG | 3 cut(s) | 311, 927, 1539 |
| GlaI | GCGC | 2 cut(s) | 176, 805 |
| GluI | GCNGC | 4 cut(s) | 111, 727, 973, 1598 |
| GsaI | CCCAGC | 1 cut(s) | 125 |
| GsuI | CTGGAG | 1 cut(s) | 1362 |
| HaeII | RGCGCY | 1 cut(s) | 807 |
| HaeIII | GGCC | 5 cut(s) | 221, 272, 611, 1241, 1421 |
| HapII | CCGG | 2 cut(s) | 356, 1736 |
| HhaI | GCGC | 2 cut(s) | 177, 806 |
| Hin6I | GCGC | 2 cut(s) | 175, 804 |
| HinP1I | GCGC | 2 cut(s) | 175, 804 |
| HincII | GTYRAC | 3 cut(s) | 66, 247, 529 |
| HindII | GTYRAC | 3 cut(s) | 66, 247, 529 |
| HindIII | AAGCTT | 1 cut(s) | 1195 |
| HinfI | GANTC | 5 cut(s) | 167, 307, 1066, 1292, 1542 |
| HpaI | GTTAAC | 2 cut(s) | 66, 529 |
| HpaII | CCGG | 2 cut(s) | 356, 1736 |
| HphI | GGTGA | 6 cut(s) | 356, 543, 662, 721, 857, 1487 |
| Hpy166II | GTNNAC | 4 cut(s) | 66, 247, 529, 1587 |
| Hpy188I | TCNGA | 4 cut(s) | 917, 1516, 1719, 1947 |
| Hpy8I | GTNNAC | 4 cut(s) | 66, 247, 529, 1587 |
| HpyAV | CCTTC | 5 cut(s) | 232, 640, 1376, 1411, 1687 |
| HpyCH4III | ACNGT | 3 cut(s) | 344, 896, 1904 |
| HpyCH4IV | ACGT | 1 cut(s) | 739 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 326, 1695 |
| HpyF3I | CTNAG | 4 cut(s) | 705, 1198, 1716, 1946 |
| HpySE526I | ACGT | 1 cut(s) | 739 |
| HspAI | GCGC | 2 cut(s) | 175, 804 |
| KflI | GGGWCCC | 1 cut(s) | 499 |
| KpnI | GGTACC | 1 cut(s) | 1757 |
| KspAI | GTTAAC | 2 cut(s) | 66, 529 |
| Kzo9I | GATC | 7 cut(s) | 97, 389, 652, 909, 1153, 1299, 1744 |
| Lsp1109I | GCAGC | 4 cut(s) | 97, 738, 959, 1609 |
| LweI | GCATC | 2 cut(s) | 838, 1513 |
| MaeI | CTAG | 3 cut(s) | 311, 927, 1539 |
| MaeII | ACGT | 1 cut(s) | 739 |
| MaeIII | GTNAC | 4 cut(s) | 616, 709, 1331, 1475 |
| MalI | GATC | 7 cut(s) | 99, 391, 654, 911, 1155, 1301, 1746 |
| MbiI | CCGCTC | 1 cut(s) | 1076 |
| MboI | GATC | 7 cut(s) | 97, 389, 652, 909, 1153, 1299, 1744 |
| MboII | GAAGA | 9 cut(s) | 289, 970, 1175, 1361, 1589, 1669, 1862, 1871, 1898 |
| MfeI | CAATTG | 1 cut(s) | 1555 |
| MflI | RGATCY | 2 cut(s) | 1153, 1744 |
| MhlI | GDGCHC | 5 cut(s) | 76, 267, 548, 1116, 1458 |
| MlyI | GAGTC | 1 cut(s) | 1301 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1386 |
| MseI | TTAA | 4 cut(s) | 65, 528, 1098, 1785 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1449 |
| MspA1I | CMGCKG | 2 cut(s) | 110, 1616 |
| MspI | CCGG | 2 cut(s) | 356, 1736 |
| MspR9I | CCNGG | 5 cut(s) | 274, 356, 763, 1249, 1758 |
| MunI | CAATTG | 1 cut(s) | 1555 |
| Mva1269I | GAATGC | 1 cut(s) | 205 |
| MvaI | CCWGG | 4 cut(s) | 274, 763, 1249, 1758 |
| MvnI | CGCG | 1 cut(s) | 814 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 326, 1695 |
| NciI | CCSGG | 1 cut(s) | 356 |
| NdeI | CATATG | 1 cut(s) | 667 |
| NdeII | GATC | 7 cut(s) | 97, 389, 652, 909, 1153, 1299, 1744 |
| NlaIV | GGNNCC | 6 cut(s) | 472, 500, 501, 596, 1648, 1755 |
| NmeAIII | GCCGAG | 2 cut(s) | 151, 619 |
| NmuCI | GTSAC | 3 cut(s) | 709, 1331, 1475 |
| NspI | RCATGY | 1 cut(s) | 1317 |
| NspV | TTCGAA | 1 cut(s) | 165 |
| PaqCI | CACCTGC | 1 cut(s) | 1030 |
| PceI | AGGCCT | 1 cut(s) | 272 |
| PciI | ACATGT | 1 cut(s) | 1313 |
| PctI | GAATGC | 1 cut(s) | 205 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1386 |
| PfeI | GAWTC | 4 cut(s) | 167, 307, 1066, 1542 |
| Pfl23II | CGTACG | 1 cut(s) | 815 |
| PflFI | GACNNNGTC | 1 cut(s) | 1021 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1428 |
| PkrI | GCNGC | 4 cut(s) | 112, 728, 974, 1599 |
| PleI | GAGTC | 1 cut(s) | 1300 |
| PpsI | GAGTC | 1 cut(s) | 1300 |
| PpuMI | RGGWCCY | 1 cut(s) | 499 |
| PscI | ACATGT | 1 cut(s) | 1313 |
| Psp124BI | GAGCTC | 2 cut(s) | 76, 267 |
| Psp5II | RGGWCCY | 1 cut(s) | 499 |
| Psp6I | CCWGG | 4 cut(s) | 272, 761, 1247, 1756 |
| PspEI | GGTNACC | 1 cut(s) | 1475 |
| PspFI | CCCAGC | 1 cut(s) | 121 |
| PspGI | CCWGG | 4 cut(s) | 272, 761, 1247, 1756 |
| PspLI | CGTACG | 1 cut(s) | 815 |
| PspN4I | GGNNCC | 6 cut(s) | 472, 500, 501, 596, 1648, 1755 |
| PspPI | GGNCC | 6 cut(s) | 219, 499, 745, 1006, 1239, 1647 |
| PspPPI | RGGWCCY | 1 cut(s) | 499 |
| PstI | CTGCAG | 3 cut(s) | 430, 728, 977 |
| PsuI | RGATCY | 2 cut(s) | 1153, 1744 |
| PsyI | GACNNNGTC | 1 cut(s) | 1021 |
| PvuII | CAGCTG | 1 cut(s) | 110 |
| RsaI | GTAC | 3 cut(s) | 817, 1634, 1755 |
| RsaNI | GTAC | 3 cut(s) | 816, 1633, 1754 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1449 |
| SacI | GAGCTC | 2 cut(s) | 76, 267 |
| SaqAI | TTAA | 4 cut(s) | 65, 528, 1098, 1785 |
| SatI | GCNGC | 4 cut(s) | 111, 727, 973, 1598 |
| Sau3AI | GATC | 7 cut(s) | 97, 389, 652, 909, 1153, 1299, 1744 |
| Sau96I | GGNCC | 6 cut(s) | 219, 499, 745, 1006, 1239, 1647 |
| SchI | GAGTC | 1 cut(s) | 1301 |
| ScrFI | CCNGG | 5 cut(s) | 274, 356, 763, 1249, 1758 |
| SduI | GDGCHC | 5 cut(s) | 76, 267, 548, 1116, 1458 |
| SfaNI | GCATC | 2 cut(s) | 838, 1513 |
| SfcI | CTRYAG | 3 cut(s) | 426, 724, 973 |
| SfuI | TTCGAA | 1 cut(s) | 165 |
| SinI | GGWCC | 4 cut(s) | 499, 745, 1006, 1647 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1449 |
| SmlI | CTYRAG | 5 cut(s) | 75, 194, 266, 948, 1601 |
| SmoI | CTYRAG | 5 cut(s) | 75, 194, 266, 948, 1601 |
| SseBI | AGGCCT | 1 cut(s) | 272 |
| SsiI | CCGC | 4 cut(s) | 234, 812, 1074, 1614 |
| SspMI | CTAG | 3 cut(s) | 311, 927, 1539 |
| SstI | GAGCTC | 2 cut(s) | 76, 267 |
| StuI | AGGCCT | 1 cut(s) | 272 |
| StyD4I | CCNGG | 5 cut(s) | 272, 354, 761, 1247, 1756 |
| StyI | CCWWGG | 3 cut(s) | 882, 1684, 1749 |
| TaaI | ACNGT | 3 cut(s) | 344, 896, 1904 |
| TaiI | ACGT | 1 cut(s) | 742 |
| TaqI | TCGA | 2 cut(s) | 165, 1069 |
| TfiI | GAWTC | 4 cut(s) | 167, 307, 1066, 1542 |
| Tru1I | TTAA | 4 cut(s) | 65, 528, 1098, 1785 |
| Tru9I | TTAA | 4 cut(s) | 65, 528, 1098, 1785 |
| TscAI | CASTG | 4 cut(s) | 430, 472, 1336, 1470 |
| TseFI | GTSAC | 3 cut(s) | 709, 1331, 1475 |
| TseI | GCWGC | 4 cut(s) | 110, 726, 972, 1597 |
| Tsp45I | GTSAC | 3 cut(s) | 709, 1331, 1475 |
| TspDTI | ATGAA | 7 cut(s) | 17, 353, 775, 812, 1260, 1638, 1898 |
| TspRI | CASTG | 4 cut(s) | 430, 472, 1336, 1470 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1021 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1428 |
| VpaK11BI | GGWCC | 4 cut(s) | 499, 745, 1006, 1647 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 704 |
| XapI | RAATTY | 6 cut(s) | 444, 456, 782, 1653, 1702, 1915 |
| XceI | RCATGY | 1 cut(s) | 1317 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1386 |
| XspI | CTAG | 3 cut(s) | 311, 927, 1539 |