Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0004050

Physical Location & Seq

Genomic Coordinates Reverse (-)

28914697 .. 28918049

Gene Structure 3353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1209900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGATGGAAACAAGTAATATGGGCATGAAAATACCCTGGACGTCCCGCGCGTCCTTTCTTCAAGCAATGCTCGTGGTGTTTTTGGTGTTTTCATGTTTTAGGGTTGAGATTTGTTACGGACAAGACGAAGATGCTGTTGTGGCAGCTCCTCCTCCCGAGCAAGAAGACTGTGATGGCATTTTCTTGTCGTACACGTTTACCTCCAGGGAGAAGGAGTTGCCGCACACGAAAAATGTGTCGGCACAGGCTTGGGCGTTCAAGTCGGAGGCGACGATCTTGAACGCCGGGTCGACCGAGCTCAAGGCGTGGAAGATGTACATAGGGTTTCAGCATCGGGAGATCTTGGTGGCCGCGGAAGGAGCTCAGATGGTTGACGGTGGTGATTTGCCCGTCGATGTTGGAACCAAAGGGGCATACTTTGCCGGGTATCCAATGACAGATTTGAAAACTATGATTGATACCGCCGGAGATTATACCCAGATTCAGGCTAAGATTGCGTTCAAAGGGACGCAGTTTGGGATGGGAGAGAAGTCTACTCCGATGCCCAAGACCATCTCCATTGTCAATGATGGCTTCAAGTGCCCTGCTGCTAAATTTAAAGGGAAGACTGCAATGTCTGTGTGCTGTAAAAAGGACCCAAAATTCAAGGCGAAGAAAGTCGAGAAAACCAAATTCATGCCACGTCAGAACGGGGATCTCTCAATCACATACGATGTAATGCAAACCTACACAATGAACTACCTGGCTCAGGTCACCATCGACAACGTCCACCCGCTCGGCCGCCTCGACCACTGGAACTTAACCTGGGAATGGATGAGGGGAGAGTTCATCAACACCATGAGAGGAGCCTACACTCACAAGAAGGACACAAGTGCATGCCTCTACGGCCAAGCCGGAAAATTCTACAAGGACTTGGACTTCTCTCAGGTCATGAACTGTGAAAAGAAGCCCGTCATCACCGACCTCCCAGCCGAGCGAAAGGATGATCCCAAGGTCGGCAAACTGCCCAGCTGCTGCCGCAACGGGACCATCTTGCCGAGCCTCATGGACAATGCACAGTCCCAGTCCATTTTCCAGCTGCAAGTGTTTAAGATCCCACCCGACGACAACAGAACTGCCATAACTCCACCTCAGCAGTGGAAAATCAGTGGCGTTCTGAACCCTACTTACAGATGCGGGCCCCCTATTAGGGTTGACCCTACTCAGTTCCCCGACCCAAGTGGGCTCCAGGCCACGTCAGACGCCATTGCCAGCTGGCAAGTGGTGTGCAACATCACCAAAACCCCGGTCCCCAGATGCTGCGTCTCGTTTTCGGCTTATTACAGCACCTCTGTGATTCCATGCAGCACGTGCGCGTGCGGGTGCAAAACATCTGAGACGAACAAATGTAACCCTAAGGCTTCCGCCATGCTTTTGCCTGCCGAAGCTCTCCTCGTGCCATTCGCAAACAGAACCGAGAAGGCAAAAGCATGGGCCAAAATCAAGCACTACGACGTGCCTAAAAAGCTTCCGTGCCCTGACAACTGCGGTGTCAGCTTGAACTGGCACATCGACTCTGATTACAGCAACGGGTGGACCGCCAGGCTCACTCTCTTCAACTGGGGAACCGACCAGTTTCAAGATTGGTACACCGCGGTGAAGATGAACAAGGCCTACCAGGACTACGAAAACGTCTACTCCTTCAACGGTACGAGGATGGAAAAGGAAGTCAACAACACAATCTTGTTCACAGGGCTCAAGGGTTTGAACTACTTGGTGGCGATAAAAAACGGGACGGATCCGAAAAAGAATCCGATGATCCCCGGGAAGCAGCAATCGGTGATTTCGTTCAAGAAGAAGCACTATCATAATATCGATATCAAAGCGGGTCAAGGGTTCCCAACGAGAGTGTTGTTCAATGGAGAAGAGTGTGCTCTTCCTAAAGTGTTCCCCAAGAACAATGCAGGGCATCTCAAGTCTAATGCTCTTTTGGTCCTATGTTTAGCCATCATGTCTTTCCTTTTCATGACAAATCGCTTCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020 GO:0031224 GO:0031225 GO:0044425

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COBRA

Protein Analysis

675

Amino Acids

75.38

Weight (kDa)

8.89

Isoelectric Point (pI)

29.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COBRA	PF04833	247 - 426	1.2e-63	COBRA-like protein
COB_C	PF25079	432 - 644	7.5e-96	COBRA family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20580 AT4G27110
fragaria_vesca	FvH4_3g02530 FvH4_3g21960 FvH4_3g21960
malus_domestica	MD03G1209900.v1.1 MD10G1315500.v1.1 MD11G1224600.v1.1
prunus_persica	Prupe.4G025000_v2.0.a1 Prupe.4G205300_v2.0.a1 Prupe.4G205300_v2.0.a1
pyrus_communis	pycom10g26780
rosa_chinensis	RchiOBHm_Chr5g0003851 RchiOBHm_Chr5g0037811
rosa_laevigata	RLG00000031181 RLG00000033811
rosa_multiflora	Rmu_sc0005416.1_g000009 Rmu_sc0006558.1_g000051
rosa_roxburghii	Rroxscaffold_1G00043110
rosa_rugosa	Rorug04G0407500 Rorug05G0167700 Rorug05G0167700 Rorug05G0167800
rosa_samantha	Rh5AG034700 Rh5AG256600 Rh5BG033100 Rh5BG259000 Rh5CG037100 Rh5CG292000 Rh5DG033400 Rh5DG268900
rosa_wichuraiana	Rw5G003180 Rw5G023790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	613
AatII	GACGTC	1 cut(s)	44
AccBSI	CCGCTC	1 cut(s)	775
AccI	GTMKAC	3 cut(s)	290, 533, 1674
AccII	CGCG	5 cut(s)	48, 50, 353, 1355, 1634
AclWI	GGATC	6 cut(s)	702, 980, 1087, 1772, 1785, 1792
AcoI	YGGCCR	3 cut(s)	348, 778, 886
AcsI	RAATTY	4 cut(s)	593, 641, 671, 899
AcvI	CACGTG	1 cut(s)	1350
AcyI	GRCGYC	2 cut(s)	41, 1242
AfaI	GTAC	4 cut(s)	191, 317, 1628, 1690
AfiI	CCNNNNNNNGG	6 cut(s)	484, 748, 810, 995, 1188, 1189
AflIII	ACRYGT	1 cut(s)	192
AjiI	CACGTC	3 cut(s)	683, 1236, 1495
AjnI	CCWGG	7 cut(s)	35, 203, 741, 803, 1227, 1580, 1656
AleI	CACNNNNGTG	2 cut(s)	1331, 1634
AluBI	AGCT	9 cut(s)	146, 298, 362, 1011, 1078, 1254, 1427, 1507, 1536
AluI	AGCT	9 cut(s)	146, 298, 362, 1011, 1078, 1254, 1427, 1507, 1536
Alw21I	GWGCWC	3 cut(s)	300, 364, 1915
Alw26I	GTCTC	2 cut(s)	1309, 1370
AlwI	GGATC	6 cut(s)	702, 980, 1087, 1772, 1785, 1792
AlwNI	CAGNNNCTG	2 cut(s)	1014, 1299
Ama87I	CYCGRG	2 cut(s)	155, 1802
AoxI	GGCC	7 cut(s)	348, 778, 886, 1178, 1230, 1473, 1650
ApaI	GGGCCC	1 cut(s)	1182
ApeKI	GCWGC	8 cut(s)	143, 587, 1011, 1014, 1078, 1299, 1344, 1810
ApoI	RAATTY	4 cut(s)	593, 641, 671, 899
ArsI	GACNNNNNNTTYG	4 cut(s)	221, 253, 1272, 1304
AspLEI	GCGC	2 cut(s)	50, 1355
AspS9I	GGNCC	8 cut(s)	634, 1026, 1178, 1179, 1288, 1473, 1575, 1972
AsuC2I	CCSGG	5 cut(s)	286, 424, 1286, 1803, 1804
AsuHPI	GGTGA	6 cut(s)	392, 745, 949, 1267, 1648, 1831
AvaI	CYCGRG	2 cut(s)	155, 1802
AvaII	GGWCC	5 cut(s)	634, 1026, 1288, 1575, 1972
AxyI	CCTNAGG	1 cut(s)	1395
BaeGI	GKGCMC	3 cut(s)	584, 1182, 1517
BamHI	GGATCC	1 cut(s)	1777
BanII	GRGCYC	5 cut(s)	300, 364, 1182, 1227, 1737
BauI	CACGAG	2 cut(s)	71, 1433
BbrPI	CACGTG	1 cut(s)	1350
BbsI	GAAGAC	2 cut(s)	171, 611
Bbv12I	GWGCWC	3 cut(s)	300, 364, 1915
BbvCI	CCTCAGC	1 cut(s)	1131
BbvI	GCAGC	8 cut(s)	155, 574, 998, 1001, 1065, 1286, 1356, 1822
BccI	CCATC	9 cut(s)	167, 361, 514, 560, 563, 764, 1037, 1690, 1994
BceAI	ACGGC	1 cut(s)	901
BciT130I	CCWGG	7 cut(s)	37, 205, 743, 805, 1229, 1582, 1658
BciVI	GTATCC	1 cut(s)	438
BcnI	CCSGG	5 cut(s)	286, 424, 1286, 1803, 1804
BcoDI	GTCTC	2 cut(s)	1309, 1370
BfuI	GTATCC	1 cut(s)	438
BglI	GCCNNNNNGGC	1 cut(s)	885
BglII	AGATCT	1 cut(s)	339
Bme18I	GGWCC	5 cut(s)	634, 1026, 1288, 1575, 1972
BmeT110I	CYCGRG	2 cut(s)	155, 1802
BmgBI	CACGTC	3 cut(s)	683, 1236, 1495
BmgT120I	GGNCC	8 cut(s)	634, 1026, 1178, 1179, 1288, 1473, 1575, 1972
BmrI	ACTGGG	2 cut(s)	1057, 1609
BmsI	GCATC	6 cut(s)	121, 340, 531, 1163, 1286, 1957
BmuI	ACTGGG	2 cut(s)	1057, 1609
BpiI	GAAGAC	2 cut(s)	171, 611
BpmI	CTGGAG	2 cut(s)	187, 1211
Bpu10I	CCTNAGC	2 cut(s)	747, 1131
BpuEI	CTTGAG	3 cut(s)	284, 1721, 1937
BpuMI	CCSGG	5 cut(s)	286, 424, 1286, 1803, 1804
Bsa29I	ATCGAT	1 cut(s)	1854
BsaAI	YACGTR	1 cut(s)	1350
BsaHI	GRCGYC	2 cut(s)	41, 1242
BsaJI	CCNNGG	9 cut(s)	35, 204, 351, 804, 990, 1284, 1632, 1801, 1802
BsaXI	ACNNNNNCTCC	4 cut(s)	200, 230, 1661, 1691
Bsc4I	CCNNNNNNNGG	6 cut(s)	484, 748, 810, 995, 1188, 1189
Bse1I	ACTGG	5 cut(s)	797, 1063, 1547, 1604, 1612
Bse21I	CCTNAGG	1 cut(s)	1395
Bse3DI	GCAATG	3 cut(s)	72, 618, 1245
BseBI	CCWGG	7 cut(s)	37, 205, 743, 805, 1229, 1582, 1658
BseCI	ATCGAT	1 cut(s)	1854
BseDI	CCNNGG	9 cut(s)	35, 204, 351, 804, 990, 1284, 1632, 1801, 1802
BseGI	GGATG	4 cut(s)	525, 819, 988, 1701
BseLI	CCNNNNNNNGG	6 cut(s)	484, 748, 810, 995, 1188, 1189
BseMI	GCAATG	3 cut(s)	72, 618, 1245
BseMII	CTCAG	6 cut(s)	377, 761, 938, 1145, 1217, 1365
BseNI	ACTGG	5 cut(s)	797, 1063, 1547, 1604, 1612
BseRI	GAGGAG	4 cut(s)	138, 141, 858, 1421
BseSI	GKGCMC	3 cut(s)	584, 1182, 1517
BseX3I	CGGCCG	1 cut(s)	778
BseXI	GCAGC	8 cut(s)	155, 574, 998, 1001, 1065, 1286, 1356, 1822
BseYI	CCCAGC	2 cut(s)	967, 1007
Bsh1236I	CGCG	5 cut(s)	48, 50, 353, 1355, 1634
Bsh1285I	CGRYCG	2 cut(s)	294, 781
BshFI	GGCC	7 cut(s)	350, 780, 888, 1180, 1232, 1475, 1652
BshVI	ATCGAT	1 cut(s)	1854
BsiEI	CGRYCG	2 cut(s)	294, 781
BsiHKAI	GWGCWC	3 cut(s)	300, 364, 1915
BsiHKCI	CYCGRG	2 cut(s)	155, 1802
BsiSI	CCGG	6 cut(s)	285, 423, 465, 894, 1286, 1803
BslFI	GGGAC	6 cut(s)	28, 520, 1039, 1045, 1274, 1786
BslI	CCNNNNNNNGG	6 cut(s)	484, 748, 810, 995, 1188, 1189
BsmAI	GTCTC	2 cut(s)	1309, 1370
BsmBI	CGTCTC	2 cut(s)	1309, 1370
BsmFI	GGGAC	6 cut(s)	28, 520, 1039, 1045, 1274, 1786
BsnI	GGCC	7 cut(s)	350, 780, 888, 1180, 1232, 1475, 1652
BsoBI	CYCGRG	2 cut(s)	155, 1802
Bsp120I	GGGCCC	1 cut(s)	1178
Bsp1286I	GDGCHC	8 cut(s)	300, 364, 584, 1182, 1227, 1517, 1737, 1915
Bsp1407I	TGTACA	1 cut(s)	315
Bsp143I	GATC	7 cut(s)	273, 339, 694, 985, 1092, 1777, 1797
BspANI	GGCC	7 cut(s)	350, 780, 888, 1180, 1232, 1475, 1652
BspCNI	CTCAG	6 cut(s)	376, 760, 937, 1144, 1216, 1366
BspDI	ATCGAT	1 cut(s)	1854
BspFNI	CGCG	5 cut(s)	48, 50, 353, 1355, 1634
BspHI	TCATGA	2 cut(s)	930, 2004
BspPI	GGATC	6 cut(s)	702, 980, 1087, 1772, 1785, 1792
BspQI	GCTCTTC	1 cut(s)	1920
BsrBI	CCGCTC	1 cut(s)	775
BsrDI	GCAATG	3 cut(s)	72, 618, 1245
BsrGI	TGTACA	1 cut(s)	315
BsrI	ACTGG	5 cut(s)	797, 1063, 1547, 1604, 1612
BssECI	CCNNGG	9 cut(s)	35, 204, 351, 804, 990, 1284, 1632, 1801, 1802
BssMI	GATC	7 cut(s)	273, 339, 694, 985, 1092, 1777, 1797
BssNI	GRCGYC	2 cut(s)	41, 1242
BssSI	CACGAG	2 cut(s)	71, 1433
BssT1I	CCWWGG	1 cut(s)	990
Bst2BI	CACGAG	2 cut(s)	71, 1433
Bst2UI	CCWGG	7 cut(s)	37, 205, 743, 805, 1229, 1582, 1658
Bst4CI	ACNGT	5 cut(s)	170, 377, 938, 1059, 1688
Bst6I	CTCTTC	3 cut(s)	1598, 1899, 1920
BstACI	GRCGYC	2 cut(s)	41, 1242
BstAPI	GCANNNNNTGC	2 cut(s)	419, 1350
BstAUI	TGTACA	1 cut(s)	315
BstBAI	YACGTR	1 cut(s)	1350
BstC8I	GCNNGC	6 cut(s)	877, 1178, 1252, 1256, 1357, 1419
BstDEI	CTNAG	8 cut(s)	363, 489, 747, 924, 1131, 1203, 1374, 1395
BstDSI	CCRYGG	2 cut(s)	351, 1632
BstEII	GGTNACC	1 cut(s)	751
BstENI	CCTNNNNNAGG	1 cut(s)	746
BstF5I	GGATG	4 cut(s)	525, 819, 988, 1701
BstFNI	CGCG	5 cut(s)	48, 50, 353, 1355, 1634
BstHHI	GCGC	2 cut(s)	50, 1355
BstKTI	GATC	7 cut(s)	276, 342, 697, 988, 1095, 1780, 1800
BstMAI	GTCTC	2 cut(s)	1309, 1370
BstMBI	GATC	7 cut(s)	273, 339, 694, 985, 1092, 1777, 1797
BstMCI	CGRYCG	2 cut(s)	294, 781
BstNI	CCWGG	7 cut(s)	37, 205, 743, 805, 1229, 1582, 1658
BstNSI	RCATGY	1 cut(s)	879
BstPI	GGTNACC	1 cut(s)	751
BstSLI	GKGCMC	3 cut(s)	584, 1182, 1517
BstUI	CGCG	5 cut(s)	48, 50, 353, 1355, 1634
BstV1I	GCAGC	8 cut(s)	155, 574, 998, 1001, 1065, 1286, 1356, 1822
BstV2I	GAAGAC	2 cut(s)	171, 611
BstX2I	RGATCY	4 cut(s)	339, 694, 1092, 1777
BstYI	RGATCY	4 cut(s)	339, 694, 1092, 1777
BstZI	CGGCCG	1 cut(s)	778
Bsu15I	ATCGAT	1 cut(s)	1854
Bsu36I	CCTNAGG	1 cut(s)	1395
BsuI	GTATCC	1 cut(s)	438
BsuRI	GGCC	7 cut(s)	350, 780, 888, 1180, 1232, 1475, 1652
BsuTUI	ATCGAT	1 cut(s)	1854
BtgI	CCRYGG	2 cut(s)	351, 1632
BtrI	CACGTC	3 cut(s)	683, 1236, 1495
BtsCI	GGATG	4 cut(s)	525, 819, 988, 1701
BtsI	GCAGTG	1 cut(s)	1142
BtsIMutI	CAGTG	3 cut(s)	790, 1142, 1153
Cac8I	GCNNGC	6 cut(s)	877, 1178, 1252, 1256, 1357, 1419
CaiI	CAGNNNCTG	2 cut(s)	1014, 1299
CciI	TCATGA	2 cut(s)	930, 2004
CfoI	GCGC	2 cut(s)	50, 1355
Cfr13I	GGNCC	8 cut(s)	634, 1026, 1178, 1179, 1288, 1473, 1575, 1972
Cfr42I	CCGCGG	2 cut(s)	354, 1635
Cfr9I	CCCGGG	1 cut(s)	1802
ClaI	ATCGAT	1 cut(s)	1854
CseI	GACGC	4 cut(s)	39, 517, 1250, 1291
Csp6I	GTAC	4 cut(s)	190, 316, 1627, 1689
CspCI	CAANNNNNGTGG	2 cut(s)	54, 89
CviQI	GTAC	4 cut(s)	190, 316, 1627, 1689
DdeI	CTNAG	8 cut(s)	363, 489, 747, 924, 1131, 1203, 1374, 1395
DpnI	GATC	7 cut(s)	275, 341, 696, 987, 1094, 1779, 1799
DpnII	GATC	7 cut(s)	273, 339, 694, 985, 1092, 1777, 1797
DraI	TTTAAA	1 cut(s)	598
DrdI	GACNNNNNNGTC	1 cut(s)	613
DseDI	GACNNNNNNGTC	1 cut(s)	613
EaeI	YGGCCR	3 cut(s)	348, 778, 886
EagI	CGGCCG	1 cut(s)	778
Eam1104I	CTCTTC	3 cut(s)	1598, 1899, 1920
EarI	CTCTTC	3 cut(s)	1598, 1899, 1920
EciI	GGCGGA	1 cut(s)	1393
Ecl136II	GAGCTC	2 cut(s)	298, 362
EclXI	CGGCCG	1 cut(s)	778
Eco130I	CCWWGG	1 cut(s)	990
Eco147I	AGGCCT	1 cut(s)	1652
Eco24I	GRGCYC	5 cut(s)	300, 364, 1182, 1227, 1737
Eco32I	GATATC	1 cut(s)	1858
Eco47I	GGWCC	5 cut(s)	634, 1026, 1288, 1575, 1972
Eco52I	CGGCCG	1 cut(s)	778
Eco53kI	GAGCTC	2 cut(s)	298, 362
Eco72I	CACGTG	1 cut(s)	1350
Eco81I	CCTNAGG	1 cut(s)	1395
Eco88I	CYCGRG	2 cut(s)	155, 1802
Eco91I	GGTNACC	1 cut(s)	751
EcoICRI	GAGCTC	2 cut(s)	298, 362
EcoNI	CCTNNNNNAGG	1 cut(s)	746
EcoO109I	RGGNCCY	2 cut(s)	634, 1179
EcoO65I	GGTNACC	1 cut(s)	751
EcoRII	CCWGG	7 cut(s)	35, 203, 741, 803, 1227, 1580, 1656
EcoRV	GATATC	1 cut(s)	1858
EcoT14I	CCWWGG	1 cut(s)	990
EcoT38I	GRGCYC	5 cut(s)	300, 364, 1182, 1227, 1737
ErhI	CCWWGG	1 cut(s)	990
Esp3I	CGTCTC	2 cut(s)	1309, 1370
FaqI	GGGAC	6 cut(s)	28, 520, 1039, 1045, 1274, 1786
FauI	CCCGC	5 cut(s)	53, 780, 1169, 1352, 1858
FblI	GTMKAC	3 cut(s)	290, 533, 1674
FokI	GGATG	4 cut(s)	532, 826, 995, 1708
FriOI	GRGCYC	5 cut(s)	300, 364, 1182, 1227, 1737
GlaI	GCGC	2 cut(s)	49, 1354
GsaI	CCCAGC	2 cut(s)	971, 1011
GsuI	CTGGAG	2 cut(s)	187, 1211
HaeIII	GGCC	7 cut(s)	350, 780, 888, 1180, 1232, 1475, 1652
HapII	CCGG	6 cut(s)	285, 423, 465, 894, 1286, 1803
HgaI	GACGC	4 cut(s)	39, 517, 1250, 1291
HhaI	GCGC	2 cut(s)	50, 1355
Hin1I	GRCGYC	2 cut(s)	41, 1242
Hin6I	GCGC	2 cut(s)	48, 1353
HinP1I	GCGC	2 cut(s)	48, 1353
HincII	GTYRAC	4 cut(s)	291, 373, 1195, 1711
HindII	GTYRAC	4 cut(s)	291, 373, 1195, 1711
HindIII	AAGCTT	1 cut(s)	1505
HinfI	GANTC	4 cut(s)	481, 1336, 1553, 1789
HpaII	CCGG	6 cut(s)	285, 423, 465, 894, 1286, 1803
HphI	GGTGA	6 cut(s)	392, 745, 949, 1267, 1648, 1831
Hpy188III	TCNNGA	8 cut(s)	155, 277, 335, 661, 931, 1619, 1831, 2005
Hpy99I	CGWCG	4 cut(s)	274, 395, 1106, 1496
HpyAV	CCTTC	5 cut(s)	205, 350, 856, 1453, 1690
HpyCH4III	ACNGT	5 cut(s)	170, 377, 938, 1059, 1688
HpyCH4IV	ACGT	8 cut(s)	41, 194, 682, 765, 1235, 1349, 1494, 1671
HpyCH4V	TGCA	9 cut(s)	611, 721, 875, 1055, 1081, 1269, 1344, 1365, 1943
HpyF3I	CTNAG	8 cut(s)	363, 489, 747, 924, 1131, 1203, 1374, 1395
HpySE526I	ACGT	8 cut(s)	41, 194, 682, 765, 1235, 1349, 1494, 1671
Hsp92I	GRCGYC	2 cut(s)	41, 1242
HspAI	GCGC	2 cut(s)	48, 1353
KspI	CCGCGG	2 cut(s)	354, 1635
Kzo9I	GATC	7 cut(s)	273, 339, 694, 985, 1092, 1777, 1797
LguI	GCTCTTC	1 cut(s)	1920
LmnI	GCTCC	4 cut(s)	151, 359, 845, 1230
Lsp1109I	GCAGC	8 cut(s)	155, 574, 998, 1001, 1065, 1286, 1356, 1822
LweI	GCATC	6 cut(s)	121, 340, 531, 1163, 1286, 1957
MaeII	ACGT	8 cut(s)	41, 194, 682, 765, 1235, 1349, 1494, 1671
MaeIII	GTNAC	3 cut(s)	113, 751, 1388
MalI	GATC	7 cut(s)	275, 341, 696, 987, 1094, 1779, 1799
MbiI	CCGCTC	1 cut(s)	775
MboI	GATC	7 cut(s)	273, 339, 694, 985, 1092, 1777, 1797
MflI	RGATCY	4 cut(s)	339, 694, 1092, 1777
MhlI	GDGCHC	8 cut(s)	300, 364, 584, 1182, 1227, 1517, 1737, 1915
MluCI	AATT	4 cut(s)	593, 641, 671, 899
MlyI	GAGTC	1 cut(s)	1547
MmeI	TCCRAC	2 cut(s)	243, 379
MseI	TTAA	3 cut(s)	597, 800, 1089
MslI	CAYNNNNRTG	2 cut(s)	1331, 1634
MspA1I	CMGCKG	5 cut(s)	353, 1011, 1078, 1254, 1634
MspI	CCGG	6 cut(s)	285, 423, 465, 894, 1286, 1803
MvaI	CCWGG	7 cut(s)	37, 205, 743, 805, 1229, 1582, 1658
MvnI	CGCG	5 cut(s)	48, 50, 353, 1355, 1634
NciI	CCSGG	5 cut(s)	286, 424, 1286, 1803, 1804
NdeII	GATC	7 cut(s)	273, 339, 694, 985, 1092, 1777, 1797
NmeAIII	GCCGAG	3 cut(s)	756, 997, 1062
NmuCI	GTSAC	1 cut(s)	751
NspI	RCATGY	1 cut(s)	879
OliI	CACNNNNGTG	2 cut(s)	1331, 1634
PaeI	GCATGC	1 cut(s)	879
PagI	TCATGA	2 cut(s)	930, 2004
PceI	AGGCCT	1 cut(s)	1652
PciSI	GCTCTTC	1 cut(s)	1920
PcsI	WCGNNNNNNNCGW	5 cut(s)	47, 123, 269, 783, 1823
PfeI	GAWTC	3 cut(s)	481, 1336, 1789
PflFI	GACNNNGTC	1 cut(s)	764
PleI	GAGTC	1 cut(s)	1547
PmaCI	CACGTG	1 cut(s)	1350
PmlI	CACGTG	1 cut(s)	1350
PpsI	GAGTC	1 cut(s)	1547
Ppu21I	YACGTR	1 cut(s)	1350
PpuMI	RGGWCCY	1 cut(s)	634
Psp124BI	GAGCTC	2 cut(s)	300, 364
Psp5II	RGGWCCY	1 cut(s)	634
Psp6I	CCWGG	7 cut(s)	35, 203, 741, 803, 1227, 1580, 1656
PspCI	CACGTG	1 cut(s)	1350
PspEI	GGTNACC	1 cut(s)	751
PspFI	CCCAGC	2 cut(s)	967, 1007
PspGI	CCWGG	7 cut(s)	35, 203, 741, 803, 1227, 1580, 1656
PspOMI	GGGCCC	1 cut(s)	1178
PspPI	GGNCC	8 cut(s)	634, 1026, 1178, 1179, 1288, 1473, 1575, 1972
PspPPI	RGGWCCY	1 cut(s)	634
PsrI	GAACNNNNNNTAC	4 cut(s)	1151, 1183, 1637, 1669
PstNI	CAGNNNCTG	2 cut(s)	1014, 1299
PsuI	RGATCY	4 cut(s)	339, 694, 1092, 1777
PsyI	GACNNNGTC	1 cut(s)	764
PvuII	CAGCTG	3 cut(s)	1011, 1078, 1254
RsaI	GTAC	4 cut(s)	191, 317, 1628, 1690
RsaNI	GTAC	4 cut(s)	190, 316, 1627, 1689
RseI	CAYNNNNRTG	2 cut(s)	1331, 1634
SacI	GAGCTC	2 cut(s)	300, 364
SacII	CCGCGG	2 cut(s)	354, 1635
SalI	GTCGAC	1 cut(s)	289
SapI	GCTCTTC	1 cut(s)	1920
SaqAI	TTAA	3 cut(s)	597, 800, 1089
Sau3AI	GATC	7 cut(s)	273, 339, 694, 985, 1092, 1777, 1797
Sau96I	GGNCC	8 cut(s)	634, 1026, 1178, 1179, 1288, 1473, 1575, 1972
SchI	GAGTC	1 cut(s)	1547
SduI	GDGCHC	8 cut(s)	300, 364, 584, 1182, 1227, 1517, 1737, 1915
SfaNI	GCATC	6 cut(s)	121, 340, 531, 1163, 1286, 1957
Sfr303I	CCGCGG	2 cut(s)	354, 1635
SgrBI	CCGCGG	2 cut(s)	354, 1635
SinI	GGWCC	5 cut(s)	634, 1026, 1288, 1575, 1972
SmaI	CCCGGG	1 cut(s)	1804
SmiMI	CAYNNNNRTG	2 cut(s)	1331, 1634
SmlI	CTYRAG	3 cut(s)	299, 1736, 1952
SmoI	CTYRAG	3 cut(s)	299, 1736, 1952
SphI	GCATGC	1 cut(s)	879
Sse9I	AATT	4 cut(s)	593, 641, 671, 899
SseBI	AGGCCT	1 cut(s)	1652
SstI	GAGCTC	2 cut(s)	300, 364
StuI	AGGCCT	1 cut(s)	1652
StyI	CCWWGG	1 cut(s)	990
TaaI	ACNGT	5 cut(s)	170, 377, 938, 1059, 1688
TaiI	ACGT	8 cut(s)	44, 197, 685, 768, 1238, 1352, 1497, 1674
TaqI	TCGA	7 cut(s)	290, 393, 660, 759, 786, 1551, 1854
TaqII	GACCGA	1 cut(s)	308
TasI	AATT	4 cut(s)	593, 641, 671, 899
TatI	WGTACW	1 cut(s)	315
TauI	GCSGC	4 cut(s)	223, 353, 783, 1020
TfiI	GAWTC	3 cut(s)	481, 1336, 1789
Tru1I	TTAA	3 cut(s)	597, 800, 1089
Tru9I	TTAA	3 cut(s)	597, 800, 1089
TscAI	CASTG	3 cut(s)	797, 1142, 1153
TseFI	GTSAC	1 cut(s)	751
TseI	GCWGC	8 cut(s)	143, 587, 1011, 1014, 1078, 1299, 1344, 1810
Tsp45I	GTSAC	1 cut(s)	751
TspDTI	ATGAA	8 cut(s)	41, 81, 664, 749, 817, 947, 1658, 1993
TspGWI	ACGGA	3 cut(s)	132, 1500, 1790
TspMI	CCCGGG	1 cut(s)	1802
TspRI	CASTG	3 cut(s)	797, 1142, 1153
Tth111I	GACNNNGTC	1 cut(s)	764
VpaK11BI	GGWCC	5 cut(s)	634, 1026, 1288, 1575, 1972
XagI	CCTNNNNNAGG	1 cut(s)	746
XapI	RAATTY	4 cut(s)	593, 641, 671, 899
XceI	RCATGY	1 cut(s)	879
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1134, 1258
XmaI	CCCGGG	1 cut(s)	1802
XmiI	GTMKAC	3 cut(s)	290, 533, 1674
ZraI	GACGTC	1 cut(s)	42

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.