AT3G22070

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
7775329 .. 7776109
781 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G22070.1

Sequence Viewer

Length: 537 bp
ATGCTCTGCTATGTCGGCAAAGCCACCAAGATTTTCATTTTCATCGTCACCGTCGTCTTCGTCATTGGCCTCGTCGTAGCCTTCGGTGTTCTCCGCCGTCACTCTCACCACTGCTCCGGCGACTATTGCTCATCTTCCACCGATCCCTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTACTTCTCCTTTCATAACTCCATTCCCAAACCCAAACCCGAATCCAAACCCGAACCCGCCTGTTCTCGGATCTTCTCCTCCATCTCCAACTGATTCATCATCATCTACTTCAATTTCCCCAAATCCGCCGGCTCCGATCGTAAATCCGAATCCGCCTCCTCCATCCACTCCGAATCCTCCGCCGGAATTTTCACCTCCTCCGCCGGATTTAGATACAACCACCGCACCTCCTCCGCCTTCAACGGATATACCAATCCCACCACCACCTCCGGCTCCAGTATCAGCATCTCCGCCGTTAACTCCGCCGAGCTCCGTCGTCACTAGTCCTGCTCCTGTGCATGCCAAGCTAGTCAACGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

178

Amino Acids

18.14

Weight (kDa)

5.64

Isoelectric Point (pI)

86.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016625)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22070
fragaria_vesca FvH4_6g43650
prunus_persica Prupe.3G221700_v2.0.a1
pyrus_communis pycom09g02720 pycom17g08890
rosa_chinensis RchiOBHm_Chr2g0160271
rosa_laevigata RLG00000021209
rosa_multiflora Rmu_sc0000403.1_g000001 Rmu_sc0008269.1_g000005
rosa_roxburghii Rroxscaffold_2G00089890
rosa_rugosa Rorug02G0482500
rosa_samantha Rh2AG548000 Rh2CG532300
rosa_wichuraiana Rw2G045340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 137, 253
AcsI RAATTY 1 cut(s) 362
AfiI CCNNNNNNNGG 1 cut(s) 242
AgsI TTSAA 2 cut(s) 288, 417
AhlI ACTAGT 1 cut(s) 497
AluBI AGCT 2 cut(s) 486, 523
AluI AGCT 2 cut(s) 486, 523
Alw21I GWGCWC 1 cut(s) 488
AlwI GGATC 2 cut(s) 137, 253
AoxI GGCC 1 cut(s) 67
ApoI RAATTY 1 cut(s) 362
AsuHPI GGTGA 3 cut(s) 40, 98, 360
BanII GRGCYC 1 cut(s) 488
BbsI GAAGAC 1 cut(s) 49
Bbv12I GWGCWC 1 cut(s) 488
BccI CCATC 2 cut(s) 265, 346
BceAI ACGGC 2 cut(s) 81, 454
BcuI ACTAGT 1 cut(s) 497
BfaI CTAG 2 cut(s) 498, 524
BmiI GGNNCC 2 cut(s) 309, 450
BmsI GCATC 1 cut(s) 470
BpiI GAAGAC 1 cut(s) 49
BpmI CTGGAG 1 cut(s) 435
BsaXI ACNNNNNCTCC 4 cut(s) 98, 128, 388, 418
Bsc4I CCNNNNNNNGG 1 cut(s) 242
Bse118I RCCGGY 1 cut(s) 304
Bse1I ACTGG 1 cut(s) 452
BseGI GGATG 1 cut(s) 338
BseLI CCNNNNNNNGG 1 cut(s) 242
BseNI ACTGG 1 cut(s) 452
BseRI GAGGAG 4 cut(s) 243, 324, 363, 396
Bsh1285I CGRYCG 1 cut(s) 315
BshFI GGCC 1 cut(s) 69
BsiEI CGRYCG 1 cut(s) 315
BsiHKAI GWGCWC 1 cut(s) 488
BsiSI CCGG 5 cut(s) 117, 305, 359, 380, 446
BslI CCNNNNNNNGG 1 cut(s) 242
BsnI GGCC 1 cut(s) 69
Bsp1286I GDGCHC 1 cut(s) 488
Bsp143I GATC 3 cut(s) 142, 245, 312
BspANI GGCC 1 cut(s) 69
BspLI GGNNCC 2 cut(s) 309, 450
BspPI GGATC 2 cut(s) 137, 253
BsrFI RCCGGY 1 cut(s) 304
BsrI ACTGG 1 cut(s) 452
BssAI RCCGGY 1 cut(s) 304
BssMI GATC 3 cut(s) 142, 245, 312
Bst4CI ACNGT 1 cut(s) 52
Bst6I CTCTTC 2 cut(s) 154, 175
BstC8I GCNNGC 2 cut(s) 306, 516
BstF5I GGATG 1 cut(s) 338
BstKTI GATC 3 cut(s) 145, 248, 315
BstMBI GATC 3 cut(s) 142, 245, 312
BstMCI CGRYCG 1 cut(s) 315
BstMWI GCNNNNNNNGC 3 cut(s) 15, 126, 520
BstNSI RCATGY 1 cut(s) 518
BstV2I GAAGAC 1 cut(s) 49
BstX2I RGATCY 1 cut(s) 245
BstYI RGATCY 1 cut(s) 245
BsuRI GGCC 1 cut(s) 69
BtsCI GGATG 1 cut(s) 338
BtsI GCAGTG 1 cut(s) 109
BtsIMutI CAGTG 1 cut(s) 109
Cac8I GCNNGC 2 cut(s) 306, 516
Cfr10I RCCGGY 1 cut(s) 304
CviAII CATG 1 cut(s) 515
CviJI RGCY 7 cut(s) 23, 69, 80, 308, 449, 486, 523
CviKI_1 RGCY 7 cut(s) 23, 69, 80, 308, 449, 486, 523
DpnI GATC 3 cut(s) 144, 247, 314
DpnII GATC 3 cut(s) 142, 245, 312
Eam1104I CTCTTC 2 cut(s) 154, 175
EarI CTCTTC 2 cut(s) 154, 175
EciI GGCGGA 8 cut(s) 83, 291, 318, 345, 366, 399, 456, 468
Ecl136II GAGCTC 1 cut(s) 486
Eco24I GRGCYC 1 cut(s) 488
Eco53kI GAGCTC 1 cut(s) 486
EcoICRI GAGCTC 1 cut(s) 486
EcoT38I GRGCYC 1 cut(s) 488
FaeI CATG 1 cut(s) 518
FaiI YATR 4 cut(s) 12, 191, 425, 516
FatI CATG 1 cut(s) 514
FauI CCCGC 1 cut(s) 240
FokI GGATG 1 cut(s) 325
FriOI GRGCYC 1 cut(s) 488
FspBI CTAG 2 cut(s) 498, 524
GsuI CTGGAG 1 cut(s) 435
HaeIII GGCC 1 cut(s) 69
HapII CCGG 5 cut(s) 117, 305, 359, 380, 446
Hin1II CATG 1 cut(s) 518
HincII GTYRAC 2 cut(s) 474, 529
HindII GTYRAC 2 cut(s) 474, 529
HinfI GANTC 4 cut(s) 217, 269, 325, 349
HpaI GTTAAC 1 cut(s) 474
HpaII CCGG 5 cut(s) 117, 305, 359, 380, 446
HphI GGTGA 3 cut(s) 40, 98, 360
Hpy166II GTNNAC 2 cut(s) 474, 529
Hpy188I TCNGA 4 cut(s) 245, 312, 324, 348
Hpy8I GTNNAC 2 cut(s) 474, 529
Hpy99I CGWCG 3 cut(s) 56, 77, 494
HpyAV CCTTC 2 cut(s) 91, 423
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4V TGCA 1 cut(s) 514
HpyF10VI GCNNNNNNNGC 3 cut(s) 15, 126, 520
Hsp92II CATG 1 cut(s) 518
KroI GCCGGC 1 cut(s) 304
KroNI GCCGGC 1 cut(s) 306
KspAI GTTAAC 1 cut(s) 474
Kzo9I GATC 3 cut(s) 142, 245, 312
LmnI GCTCC 5 cut(s) 119, 313, 454, 491, 511
LpnPI CCDG 9 cut(s) 130, 249, 318, 372, 393, 459, 465, 516, 522
LweI GCATC 1 cut(s) 470
MaeI CTAG 2 cut(s) 498, 524
MaeIII GTNAC 3 cut(s) 46, 98, 493
MalI GATC 3 cut(s) 144, 247, 314
MboI GATC 3 cut(s) 142, 245, 312
MflI RGATCY 1 cut(s) 245
MhlI GDGCHC 1 cut(s) 488
MluCI AATT 2 cut(s) 288, 362
MmeI TCCRAC 1 cut(s) 287
MroNI GCCGGC 1 cut(s) 304
MseI TTAA 2 cut(s) 473, 535
MspI CCGG 5 cut(s) 117, 305, 359, 380, 446
MwoI GCNNNNNNNGC 3 cut(s) 15, 126, 520
NaeI GCCGGC 1 cut(s) 306
NdeII GATC 3 cut(s) 142, 245, 312
NgoMIV GCCGGC 1 cut(s) 304
NlaIII CATG 1 cut(s) 518
NlaIV GGNNCC 2 cut(s) 309, 450
NmeAIII GCCGAG 1 cut(s) 507
NmuCI GTSAC 3 cut(s) 46, 98, 493
NspI RCATGY 1 cut(s) 518
PaeI GCATGC 1 cut(s) 518
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PdiI GCCGGC 1 cut(s) 306
PfeI GAWTC 4 cut(s) 217, 269, 325, 349
Ple19I CGATCG 1 cut(s) 315
Psp124BI GAGCTC 1 cut(s) 488
PspN4I GGNNCC 2 cut(s) 309, 450
PsuI RGATCY 1 cut(s) 245
PvuI CGATCG 1 cut(s) 315
SacI GAGCTC 1 cut(s) 488
SaqAI TTAA 2 cut(s) 473, 535
Sau3AI GATC 3 cut(s) 142, 245, 312
SduI GDGCHC 1 cut(s) 488
SetI ASST 5 cut(s) 373, 406, 445, 488, 525
SfaNI GCATC 1 cut(s) 470
SpeI ACTAGT 1 cut(s) 497
SphI GCATGC 1 cut(s) 518
Sse9I AATT 2 cut(s) 288, 362
SspMI CTAG 2 cut(s) 498, 524
SstI GAGCTC 1 cut(s) 488
TaaI ACNGT 1 cut(s) 52
TasI AATT 2 cut(s) 288, 362
TfiI GAWTC 4 cut(s) 217, 269, 325, 349
Tru1I TTAA 2 cut(s) 473, 535
Tru9I TTAA 2 cut(s) 473, 535
TscAI CASTG 1 cut(s) 116
TseFI GTSAC 3 cut(s) 46, 98, 493
Tsp45I GTSAC 3 cut(s) 46, 98, 493
TspDTI ATGAA 4 cut(s) 25, 31, 178, 261
TspGWI ACGGA 2 cut(s) 434, 478
TspRI CASTG 1 cut(s) 116
XapI RAATTY 1 cut(s) 362
XceI RCATGY 1 cut(s) 518
XspI CTAG 2 cut(s) 498, 524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.