AT3G23310

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
8338871 .. 8343737
4867 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G23310.1

Sequence Viewer

Length: 1707 bp
ATGGATACTGCCAGAGCATGGCTGAAGAAATTAAAGTCTAAAGGGAAAGAGAAATCTTCGAATAAGAAGGAAACTTCTAGAGGAAATGTTAAGGAGGGATCAAAAACAGCTGGAGGTGAAGAAGCTGTGTCTAATGTGACAAAGCAGAAGGCTGCTGCTGCGAAACAGTATATTGAAAATCATTACAAAAAACAAGTTCAAAGTCAGCAGCAAAGAAAAGAGCGGCGTGATATGCTGGAAAATAAGTTAGCTGCTGCAGAAGTCTCTGAGGAAGAGCAAAAGAATCTGCTTAAGGATCTAGAGAAGAAGGAAACTGAATACATGCGCCGTCAGAGACATAAAATGGGAACTGATGACTTCGAGCCATTGACAATGATAGGAAAGGGGGCTTTTGGAGAGGTTAGGATATGTAGGGAGAAGACAACAGGCAATGTCTATGCGATGAAAAAGCTTAAGAAATCTGAGATGCTCCGTAGAGGCCAGGTGGAGCATGTGAAAGCAGAGAGAAATTTACTTGCAGAGGTTGACAGCAATTGCATTGTGAAGCTGTATTGTTCTTTTCAAGATGAAGAGTATTTGTATCTTATTATGGAGTATCTACCTGGTGGAGATATGATGACATTACTTATGAGGAAAGACACACTTACTGAAGATGAGGCAAGATTTTATGTTGGGGAAACTGTCTTAGCTATCGAGTCCATTCATAAGCACAATTATATCCACAGAGATATCAAGCCTGATAATCTGCTACTCGACAGAAGCGGTCACATGAAGTTATCCGATTTTGGATTATGTAAGCCATTAGATTGTAGTATTCTCCAGGAAAAAGATTTCGTAGTTGCACACAACCTTAGTGGGGCTCTACAAAGTGATGGCCGCCCTGTGGCACCGAGACGTACCCGCTCTCAAATGGAACAATTACAAAACTGGCAGAGAAATAGAAGGATGCTTGCTTATTCTACAGTTGGAACTCCTGACTATATTGCTCCAGAAGTTTTGTTGAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCACTTGGTGCGATCATGTATGAAATGCTTGTGGGGTTTCCACCATTTTATTCAGACGAGCCAATGACAACTTGTAGAAAGATAGTAAATTGGAAAAATTATTTAAAATTCCCTGATGAGGTTAGGCTATCACCAGAAGCCAAGGATCTAATTTGTAGACTTTTATGCAACGTAGAACAAAGGATTGGAACAAAAGGAGCAAATGAAATTAAGGAACACCCTTGGTTCAGTGGTGTCGAATGGGAAAAGTTGTATCAGATGAAGGCTGCTTTTATTCCCCAAGTTAATGACGAGCTGGACACCCAAAATTTCGAAAAATTCGAAGAGACTGATAAGCAAGTTCCGAAGACGCCAAAATCAGGTCCATGGAGAAAGATGCTCTCATCCAAAGACATAAACTTTGTGGGTTATACTTACAAGAACGTTGAAATCGTAAACCATGATCAATTACCAGGGATAGCTGAGCTGAAGAAGAAGAGCACAAAGCCAAAGCGGCCATCAATTAAATCCCTCTTTGAGGATGAATCAGCCAGTAGCACCACAAGCCACCAAGGAAGCTTTATGAAACTCTTGCCAACACAAATCGAAGTTCCAGAGAAAGAAGACAAATCAAGCTCATCTAGTGAAACCCTATCATCTTCCACCACACGTTTCGACAATGCCACATCCTAA

Protein Analysis

568

Amino Acids

65.32

Weight (kDa)

8.78

Isoelectric Point (pI)

43.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 122 - 269 1.9e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 124 - 268 3e-22 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 318 - 421 4.5e-21 Protein kinase domain
Pkinase_C PF00433 440 - 484 8.7e-09 Protein kinase C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 886
AccB7I CCANNNNNTGG 1 cut(s) 18
AccBSI CCGCTC 2 cut(s) 223, 903
AccI GTMKAC 1 cut(s) 1192
AciI CCGC 5 cut(s) 223, 762, 877, 901, 1528
AclI AACGTT 1 cut(s) 1458
AclWI GGATC 3 cut(s) 106, 303, 1188
AcoI YGGCCR 2 cut(s) 874, 1529
AcsI RAATTY 4 cut(s) 508, 1142, 1342, 1352
AcuI CTGAAG 3 cut(s) 44, 669, 1523
AcyI GRCGYC 1 cut(s) 1385
AdeI CACNNNGTG 1 cut(s) 1043
AfaI GTAC 1 cut(s) 898
AfiI CCNNNNNNNGG 6 cut(s) 18, 856, 883, 1153, 1394, 1552
AflII CTTAAG 2 cut(s) 290, 452
AflIII ACRYGT 1 cut(s) 1682
AgsI TTSAA 5 cut(s) 176, 200, 563, 1003, 1463
AjnI CCWGG 4 cut(s) 480, 601, 819, 1486
AjuI GAANNNNNNNTTGG 2 cut(s) 1203, 1235
Alw21I GWGCWC 1 cut(s) 1517
Alw26I GTCTC 4 cut(s) 268, 328, 886, 1355
AlwI GGATC 3 cut(s) 106, 303, 1188
AoxI GGCC 3 cut(s) 478, 874, 1529
ApeKI GCWGC 7 cut(s) 152, 155, 158, 208, 251, 254, 1301
ApoI RAATTY 4 cut(s) 508, 1142, 1342, 1352
ArsI GACNNNNNNTTYG 2 cut(s) 1418, 1450
AspLEI GCGC 1 cut(s) 327
AspS9I GGNCC 1 cut(s) 1397
AsuHPI GGTGA 2 cut(s) 128, 1158
AsuII TTCGAA 3 cut(s) 59, 1347, 1356
AvaII GGWCC 1 cut(s) 1397
BanI GGYRCC 1 cut(s) 886
BanII GRGCYC 1 cut(s) 862
BbsI GAAGAC 3 cut(s) 425, 1388, 1644
Bbv12I GWGCWC 1 cut(s) 1517
BbvI GCAGC 7 cut(s) 139, 142, 145, 220, 238, 241, 1288
BccI CCATC 2 cut(s) 866, 1540
BceAI ACGGC 1 cut(s) 312
BciT130I CCWGG 4 cut(s) 482, 603, 821, 1488
BclI TGATCA 1 cut(s) 1477
BcoDI GTCTC 4 cut(s) 268, 328, 886, 1355
BfaI CTAG 3 cut(s) 78, 299, 1656
BfmI CTRYAG 2 cut(s) 255, 960
BfrI CTTAAG 2 cut(s) 290, 452
BglI GCCNNNNNGGC 1 cut(s) 1528
BlpI GCTNAGC 1 cut(s) 1497
Bme1390I CCNGG 4 cut(s) 482, 603, 821, 1488
Bme18I GGWCC 1 cut(s) 1397
BmgT120I GGNCC 1 cut(s) 1397
BmiI GGNNCC 1 cut(s) 888
BmrFI CCNGG 4 cut(s) 482, 603, 821, 1488
BmsI GCATC 3 cut(s) 456, 936, 1401
BpiI GAAGAC 3 cut(s) 425, 1388, 1644
BpmI CTGGAG 3 cut(s) 132, 803, 972
Bpu1102I GCTNAGC 1 cut(s) 1497
Bpu14I TTCGAA 3 cut(s) 59, 1347, 1356
BsaHI GRCGYC 1 cut(s) 1385
BsaJI CCNNGG 5 cut(s) 1176, 1256, 1400, 1487, 1585
Bsc4I CCNNNNNNNGG 6 cut(s) 18, 856, 883, 1153, 1394, 1552
Bse1I ACTGG 2 cut(s) 932, 1566
Bse3DI GCAATG 1 cut(s) 436
BseBI CCWGG 4 cut(s) 482, 603, 821, 1488
BseDI CCNNGG 5 cut(s) 1176, 1256, 1400, 1487, 1585
BseGI GGATG 4 cut(s) 951, 1418, 1561, 1700
BseLI CCNNNNNNNGG 6 cut(s) 18, 856, 883, 1153, 1394, 1552
BseMI GCAATG 1 cut(s) 436
BseMII CTCAG 3 cut(s) 258, 453, 1488
BseNI ACTGG 2 cut(s) 932, 1566
BseXI GCAGC 7 cut(s) 139, 142, 145, 220, 238, 241, 1288
BshFI GGCC 3 cut(s) 480, 876, 1531
BshNI GGYRCC 1 cut(s) 886
BsiHKAI GWGCWC 1 cut(s) 1517
BslI CCNNNNNNNGG 6 cut(s) 18, 856, 883, 1153, 1394, 1552
BsmAI GTCTC 4 cut(s) 268, 328, 886, 1355
BsmBI CGTCTC 1 cut(s) 886
BsnI GGCC 3 cut(s) 480, 876, 1531
Bsp119I TTCGAA 3 cut(s) 59, 1347, 1356
Bsp1286I GDGCHC 2 cut(s) 862, 1517
Bsp143I GATC 5 cut(s) 98, 295, 1047, 1180, 1477
Bsp1720I GCTNAGC 1 cut(s) 1497
Bsp19I CCATGG 1 cut(s) 1400
BspACI CCGC 5 cut(s) 223, 762, 877, 901, 1528
BspANI GGCC 3 cut(s) 480, 876, 1531
BspCNI CTCAG 3 cut(s) 259, 454, 1489
BspLI GGNNCC 1 cut(s) 888
BspMAI CTGCAG 1 cut(s) 259
BspPI GGATC 3 cut(s) 106, 303, 1188
BspQI GCTCTTC 2 cut(s) 267, 1505
BspT104I TTCGAA 3 cut(s) 59, 1347, 1356
BspT107I GGYRCC 1 cut(s) 886
BspTI CTTAAG 2 cut(s) 290, 452
BsrBI CCGCTC 2 cut(s) 223, 903
BsrDI GCAATG 1 cut(s) 436
BsrI ACTGG 2 cut(s) 932, 1566
BssECI CCNNGG 5 cut(s) 1176, 1256, 1400, 1487, 1585
BssMI GATC 5 cut(s) 98, 295, 1047, 1180, 1477
BssNI GRCGYC 1 cut(s) 1385
BssT1I CCWWGG 4 cut(s) 1176, 1256, 1400, 1585
Bst2UI CCWGG 4 cut(s) 482, 603, 821, 1488
Bst4CI ACNGT 3 cut(s) 168, 682, 964
Bst6I CTCTTC 4 cut(s) 267, 564, 1353, 1505
BstACI GRCGYC 1 cut(s) 1385
BstAFI CTTAAG 2 cut(s) 290, 452
BstBI TTCGAA 3 cut(s) 59, 1347, 1356
BstC8I GCNNGC 1 cut(s) 951
BstDEI CTNAG 5 cut(s) 267, 462, 685, 851, 1497
BstDSI CCRYGG 1 cut(s) 1400
BstENI CCTNNNNNAGG 1 cut(s) 1550
BstF5I GGATG 4 cut(s) 951, 1418, 1561, 1700
BstHHI GCGC 1 cut(s) 327
BstKTI GATC 5 cut(s) 101, 298, 1050, 1183, 1480
BstMAI GTCTC 4 cut(s) 268, 328, 886, 1355
BstMBI GATC 5 cut(s) 98, 295, 1047, 1180, 1477
BstMWI GCNNNNNNNGC 4 cut(s) 158, 232, 1528, 1578
BstNI CCWGG 4 cut(s) 482, 603, 821, 1488
BstNSI RCATGY 2 cut(s) 325, 494
BstSCI CCNGG 4 cut(s) 480, 601, 819, 1486
BstSFI CTRYAG 2 cut(s) 255, 960
BstV1I GCAGC 7 cut(s) 139, 142, 145, 220, 238, 241, 1288
BstV2I GAAGAC 3 cut(s) 425, 1388, 1644
BstX2I RGATCY 2 cut(s) 295, 1180
BstYI RGATCY 2 cut(s) 295, 1180
BsuRI GGCC 3 cut(s) 480, 876, 1531
BtgI CCRYGG 1 cut(s) 1400
BtgZI GCGATG 1 cut(s) 455
BtsCI GGATG 4 cut(s) 951, 1418, 1561, 1700
BtsIMutI CAGTG 1 cut(s) 1270
Cac8I GCNNGC 1 cut(s) 951
CfoI GCGC 1 cut(s) 327
Cfr13I GGNCC 1 cut(s) 1397
CseI GACGC 1 cut(s) 1393
CsiI ACCWGGT 1 cut(s) 601
Csp6I GTAC 1 cut(s) 897
CspCI CAANNNNNGTGG 2 cut(s) 835, 870
CviAII CATG 8 cut(s) 18, 322, 491, 769, 1018, 1051, 1401, 1475
CviQI GTAC 1 cut(s) 897
DdeI CTNAG 5 cut(s) 267, 462, 685, 851, 1497
DpnI GATC 5 cut(s) 100, 297, 1049, 1182, 1479
DpnII GATC 5 cut(s) 98, 295, 1047, 1180, 1477
DraI TTTAAA 1 cut(s) 1140
DraIII CACNNNGTG 1 cut(s) 1043
EaeI YGGCCR 2 cut(s) 874, 1529
Eam1104I CTCTTC 4 cut(s) 267, 564, 1353, 1505
EarI CTCTTC 4 cut(s) 267, 564, 1353, 1505
Eco130I CCWWGG 4 cut(s) 1176, 1256, 1400, 1585
Eco24I GRGCYC 1 cut(s) 862
Eco32I GATATC 1 cut(s) 730
Eco47I GGWCC 1 cut(s) 1397
Eco57I CTGAAG 3 cut(s) 44, 669, 1523
EcoNI CCTNNNNNAGG 1 cut(s) 1550
EcoRII CCWGG 4 cut(s) 480, 601, 819, 1486
EcoRV GATATC 1 cut(s) 730
EcoT14I CCWWGG 4 cut(s) 1176, 1256, 1400, 1585
EcoT38I GRGCYC 1 cut(s) 862
ErhI CCWWGG 4 cut(s) 1176, 1256, 1400, 1585
Esp3I CGTCTC 1 cut(s) 886
FaeI CATG 8 cut(s) 21, 325, 494, 772, 1021, 1054, 1404, 1478
FalI AAGNNNNNCTT 2 cut(s) 627, 659
FatI CATG 8 cut(s) 17, 321, 490, 768, 1017, 1050, 1400, 1474
FauI CCCGC 1 cut(s) 908
FbaI TGATCA 1 cut(s) 1477
FblI GTMKAC 1 cut(s) 1192
FokI GGATG 4 cut(s) 958, 1405, 1568, 1687
FriOI GRGCYC 1 cut(s) 862
FspBI CTAG 3 cut(s) 78, 299, 1656
GlaI GCGC 1 cut(s) 326
GsuI CTGGAG 3 cut(s) 132, 803, 972
HaeIII GGCC 3 cut(s) 480, 876, 1531
HgaI GACGC 1 cut(s) 1393
HhaI GCGC 1 cut(s) 327
Hin1I GRCGYC 1 cut(s) 1385
Hin1II CATG 8 cut(s) 21, 325, 494, 772, 1021, 1054, 1404, 1478
Hin6I GCGC 1 cut(s) 325
HinP1I GCGC 1 cut(s) 325
HincII GTYRAC 1 cut(s) 526
HindII GTYRAC 1 cut(s) 526
HindIII AAGCTT 2 cut(s) 449, 1591
HinfI GANTC 3 cut(s) 283, 695, 1559
HphI GGTGA 2 cut(s) 128, 1158
Hpy166II GTNNAC 3 cut(s) 526, 1193, 1471
Hpy188I TCNGA 7 cut(s) 268, 333, 463, 781, 1090, 1293, 1380
Hpy188III TCNNGA 6 cut(s) 78, 299, 563, 974, 989, 1628
Hpy8I GTNNAC 3 cut(s) 526, 1193, 1471
HpyAV CCTTC 5 cut(s) 61, 142, 301, 936, 1291
HpyCH4III ACNGT 3 cut(s) 168, 682, 964
HpyCH4IV ACGT 4 cut(s) 895, 1206, 1458, 1684
HpyCH4V TGCA 5 cut(s) 257, 518, 537, 842, 1203
HpyF10VI GCNNNNNNNGC 4 cut(s) 158, 232, 1528, 1578
HpyF3I CTNAG 5 cut(s) 267, 462, 685, 851, 1497
HpySE526I ACGT 4 cut(s) 895, 1206, 1458, 1684
Hsp92I GRCGYC 1 cut(s) 1385
Hsp92II CATG 8 cut(s) 21, 325, 494, 772, 1021, 1054, 1404, 1478
HspAI GCGC 1 cut(s) 325
Ksp22I TGATCA 1 cut(s) 1477
Kzo9I GATC 5 cut(s) 98, 295, 1047, 1180, 1477
LguI GCTCTTC 2 cut(s) 267, 1505
LmnI GCTCC 4 cut(s) 474, 487, 991, 1232
Lsp1109I GCAGC 7 cut(s) 139, 142, 145, 220, 238, 241, 1288
LweI GCATC 3 cut(s) 456, 936, 1401
MabI ACCWGGT 1 cut(s) 601
MaeI CTAG 3 cut(s) 78, 299, 1656
MaeII ACGT 4 cut(s) 895, 1206, 1458, 1684
MaeIII GTNAC 3 cut(s) 136, 764, 1035
MalI GATC 5 cut(s) 100, 297, 1049, 1182, 1479
MbiI CCGCTC 2 cut(s) 223, 903
MboI GATC 5 cut(s) 98, 295, 1047, 1180, 1477
MfeI CAATTG 1 cut(s) 532
MflI RGATCY 2 cut(s) 295, 1180
MhlI GDGCHC 2 cut(s) 862, 1517
MlyI GAGTC 1 cut(s) 704
MmeI TCCRAC 1 cut(s) 946
MseI TTAA 8 cut(s) 32, 90, 291, 453, 1139, 1245, 1320, 1539
MspA1I CMGCKG 1 cut(s) 110
MspCI CTTAAG 2 cut(s) 290, 452
MspR9I CCNGG 4 cut(s) 482, 603, 821, 1488
MunI CAATTG 1 cut(s) 532
MvaI CCWGG 4 cut(s) 482, 603, 821, 1488
MwoI GCNNNNNNNGC 4 cut(s) 158, 232, 1528, 1578
NcoI CCATGG 1 cut(s) 1400
NdeII GATC 5 cut(s) 98, 295, 1047, 1180, 1477
NlaIII CATG 8 cut(s) 21, 325, 494, 772, 1021, 1054, 1404, 1478
NlaIV GGNNCC 1 cut(s) 888
NmuCI GTSAC 3 cut(s) 136, 764, 1035
NspI RCATGY 2 cut(s) 325, 494
NspV TTCGAA 3 cut(s) 59, 1347, 1356
PciSI GCTCTTC 2 cut(s) 267, 1505
PcsI WCGNNNNNNNCGW 2 cut(s) 1353, 1464
PfeI GAWTC 2 cut(s) 283, 1559
PflMI CCANNNNNTGG 1 cut(s) 18
PfoI TCCNGGA 1 cut(s) 819
PleI GAGTC 1 cut(s) 703
PpsI GAGTC 1 cut(s) 703
Psp1406I AACGTT 1 cut(s) 1458
Psp6I CCWGG 4 cut(s) 480, 601, 819, 1486
PspGI CCWGG 4 cut(s) 480, 601, 819, 1486
PspN4I GGNNCC 1 cut(s) 888
PspPI GGNCC 1 cut(s) 1397
PstI CTGCAG 1 cut(s) 259
PsuI RGATCY 2 cut(s) 295, 1180
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 1 cut(s) 898
RsaNI GTAC 1 cut(s) 897
SapI GCTCTTC 2 cut(s) 267, 1505
SaqAI TTAA 8 cut(s) 32, 90, 291, 453, 1139, 1245, 1320, 1539
Sau3AI GATC 5 cut(s) 98, 295, 1047, 1180, 1477
Sau96I GGNCC 1 cut(s) 1397
SchI GAGTC 1 cut(s) 704
ScrFI CCNGG 4 cut(s) 482, 603, 821, 1488
SduI GDGCHC 2 cut(s) 862, 1517
SexAI ACCWGGT 1 cut(s) 601
SfaNI GCATC 3 cut(s) 456, 936, 1401
SfcI CTRYAG 2 cut(s) 255, 960
SfuI TTCGAA 3 cut(s) 59, 1347, 1356
SinI GGWCC 1 cut(s) 1397
SmlI CTYRAG 2 cut(s) 290, 452
SmoI CTYRAG 2 cut(s) 290, 452
SsiI CCGC 5 cut(s) 223, 762, 877, 901, 1528
SspMI CTAG 3 cut(s) 78, 299, 1656
StyD4I CCNGG 4 cut(s) 480, 601, 819, 1486
StyI CCWWGG 4 cut(s) 1176, 1256, 1400, 1585
TaaI ACNGT 3 cut(s) 168, 682, 964
TaiI ACGT 4 cut(s) 898, 1209, 1461, 1687
TaqI TCGA 9 cut(s) 59, 360, 693, 753, 1272, 1347, 1356, 1620, 1689
TauI GCSGC 3 cut(s) 226, 879, 1531
TfiI GAWTC 2 cut(s) 283, 1559
Tru1I TTAA 8 cut(s) 32, 90, 291, 453, 1139, 1245, 1320, 1539
Tru9I TTAA 8 cut(s) 32, 90, 291, 453, 1139, 1245, 1320, 1539
TscAI CASTG 1 cut(s) 1270
TseFI GTSAC 3 cut(s) 136, 764, 1035
TseI GCWGC 7 cut(s) 152, 155, 158, 208, 251, 254, 1301
Tsp45I GTSAC 3 cut(s) 136, 764, 1035
TspDTI ATGAA 9 cut(s) 458, 582, 692, 785, 1071, 1254, 1310, 1572, 1613
TspGWI ACGGA 1 cut(s) 461
TspRI CASTG 1 cut(s) 1270
Van91I CCANNNNNTGG 1 cut(s) 18
Vha464I CTTAAG 2 cut(s) 290, 452
VpaK11BI GGWCC 1 cut(s) 1397
XagI CCTNNNNNAGG 1 cut(s) 1550
XapI RAATTY 4 cut(s) 508, 1142, 1342, 1352
XbaI TCTAGA 2 cut(s) 77, 298
XceI RCATGY 2 cut(s) 325, 494
XmiI GTMKAC 1 cut(s) 1192
XspI CTAG 3 cut(s) 78, 299, 1656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.