AT3G25100

Cell division control protein 45 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0016184
Physical Location & Seq
Forward (+)
9143916 .. 9146236
2321 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G25100.1

Sequence Viewer

Length: 1791 bp
ATGGTGAGGATTAAGAAAGTAGAATCGTTCTACGCGAAGCTTCGTGAGTCAGCTACTTCATTATCTTCACAGAATCCACTTTTGATATTTCCTTCAACATCTGATGTTGATTCACTTTGTGCGCTTAAGGTTATTACTCATATCCTTGAATCAGATTCGATTCAGTATTCTTGTTTCCCTGTATCGTCTTTTTTGGAGATTCACAAGTATGCTGGTCCTGCTGGTTTGTGTTCTACTTCGTTGGAGAGTCCTCCTGTTACTATACTGTTGATTAATTGGGGTTGTCACCGTGATTTGAAGCTTGTGTTGAAGTTAGGTCCTTCGGCTCGTGTTTTCGTTGTTGATAGTCATAGGCCTATTCATTTGCATAATCTTAGTGATTATAATGAGCAAGTTGTTGTTCTTCATACTGATGATGATGAGAGGCAAGGTGATTTGGCTTATGATTTCGATGTGTTGAAATTGGCGAATGAGAGCTTTCAGTTACGTGTAGAAGATGCTGGTGAAGAATCTGATGAGGAGGAGGAAGATGAGGAAGAGGATGAGGAGGATGATGATGATGATGATGGTGATAGGCCAAGTAAGAGGAGGAAAATGGGAGATGGTGTGAAGGTTTTCAAGAAGCTAAAGAGGGATTATTACAAGATGGGGACTTTTCATGGGAAGCCATCGGGGTGTTTGTTGTTTGAGCTATCTCATATGTTGAGGAAGAACACTAACGAGTTGTTGTGGCTGGCTTGTGTTTCTTTGACTGATCAGTTTGTTCATGAGAGGTTGACTGATGAAAGATATCAAGCTGCGGTTATGGAGCTTGAACAACACATCAATAGCTCAGGGAATATAGATAAGATCACTAGTGTTACTCTGAAAGATGGAACCAAGGTTCGAGCACCAGACTGTTCAAGAATCTCTTATGAAGAAGAGCCTAGGCTTATGCTTCTTAGAGAGTGGACGTTGTTTGACTCCATGCTTTGTTCTTCATACATTGCGACTAAGTTGAAGACATGGAGTGATAACGGTATCAAGAAACTTAAGCTTCTTCTAGCGCGTATGGGATTTGCACTTATCGAGTGTCAGCAAAAGTTTCCGTACATGAGCCTTGAGGTGAAGAGGAAGATGAAGCAAGAGTTTGATCGGTTTTTGCCAGAATATGGGCTTAATGATTTCTACTACCGGAGTTTCTTGCGGCTTCATGGTTATAGCTCAAGGGTCTCTGCTGCAGATGTTGTCTATGGTATTACAGCACTTCTTGAATCATTTCTTGGGTCAGGTGGCTCCTCTGCTTCAAAACAGTTTGGTGAAGCTTATGATGCTCTGTCTTTGAACAATTTGGATAAACTTCGATCTGGGATGCAACAAGCAATCAAGGTTCAACGAGCAATTCTTAGACAAGGAAGTGCAGCAATCACTAAAAGTGGATGCATTCGAAGTGGTAGGAAATTCAGATGGGTAAAGATTGAAGATTCAATGGATGCGAAGTATTTGGGATATCCTCAGGCCTTAACAAAATTCTGTTACTTTCTGATGGATGCTTTGAGAGAGAAAGGAGCTAGGATGAAACCAATGCTATGTGCCTGCGCATCTCAACAACCTGGGAAGATACTCGTGGTTGGGGTTTGTGGGAAACCGAGGCTCGGGGCAGTCAGAGGGAATGCTTTTGGCAATGCTTTCAGAAAGGCAGCTCAAGAAAGTAGAGCTGATTACTTTCACGAGCTATTCGAGTCTTCTTGGATTGTCTTGGATGCTTCTGCAGTTAACTCTTTCATGATTAGATTAACCGAGAAGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003688 GO:0003690 GO:0003697 GO:0003824 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005656 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006267 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0023052 GO:0031261 GO:0031298 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031570 GO:0031573 GO:0031935 GO:0031938 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0033260 GO:0033262 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0035556 GO:0036387 GO:0036388 GO:0042770 GO:0043138 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043596 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044773 GO:0044774 GO:0044786 GO:0045786 GO:0045787 GO:0045930 GO:0045931 GO:0045934 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0060968 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071163 GO:0071704 GO:0071824 GO:0071840 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072428 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0097159 GO:0140097 GO:1900087 GO:1901360 GO:1901363 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902275 GO:1902292 GO:1902299 GO:1902315 GO:1902402 GO:1902403 GO:1902576 GO:1902806 GO:1902808 GO:1902969 GO:1902975 GO:1902977 GO:1903047 GO:1903463 GO:1903464 GO:1903506 GO:1990837 GO:2000045 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
CDC45

Protein Analysis

596

Amino Acids

67.55

Weight (kDa)

6.4

Isoelectric Point (pI)

48.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC45 PF02724 28 - 595 1.7e-165 CDC45
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016184)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25100
fragaria_vesca FvH4_2g18640
malus_domestica MD05G1172300.v1.1 MD10G1160500.v1.1
prunus_persica Prupe.8G199700_v2.0.a1 Prupe.8G199700_v2.0.a1
pyrus_communis pycom05g15890 pycom10g13870
rosa_chinensis RchiOBHm_Chr6g0284201
rosa_laevigata RLG00000012757
rosa_multiflora Rmu_sc0003778.1_g000001
rosa_roxburghii Rroxscaffold_7G00184790
rosa_rugosa Rorug06G0161800
rosa_samantha Rh6BG275200
rosa_wichuraiana Rw6G023630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 384
Acc16I TGCGCA 1 cut(s) 1579
AccB7I CCANNNNNTGG 1 cut(s) 1151
AccII CGCG 2 cut(s) 35, 1048
AciI CCGC 2 cut(s) 800, 1186
AcsI RAATTY 2 cut(s) 1439, 1508
AdeI CACNNNGTG 1 cut(s) 119
AfaI GTAC 1 cut(s) 1091
AfiI CCNNNNNNNGG 2 cut(s) 1151, 1634
AflII CTTAAG 2 cut(s) 125, 1031
AflIII ACRYGT 1 cut(s) 487
AhlI ACTAGT 1 cut(s) 854
AjnI CCWGG 1 cut(s) 1591
AjuI GAANNNNNNNTTGG 2 cut(s) 1245, 1277
AloI GAACNNNNNNTCC 2 cut(s) 867, 899
Alw21I GWGCWC 1 cut(s) 892
Alw26I GTCTC 1 cut(s) 1216
Ama87I CYCGRG 1 cut(s) 1634
AoxI GGCC 3 cut(s) 353, 575, 1497
ApeKI GCWGC 4 cut(s) 797, 1217, 1400, 1679
ApoI RAATTY 2 cut(s) 1439, 1508
AseI ATTAAT 1 cut(s) 273
Asp700I GAANNNNTTC 2 cut(s) 614, 1257
AspA2I CCTAGG 1 cut(s) 926
AspLEI GCGC 3 cut(s) 124, 1048, 1580
AspS9I GGNCC 2 cut(s) 215, 317
AsuHPI GGTGA 7 cut(s) 16, 278, 443, 515, 581, 1117, 1310
AsuII TTCGAA 1 cut(s) 1426
AvaI CYCGRG 1 cut(s) 1634
AvaII GGWCC 2 cut(s) 215, 317
AvrII CCTAGG 1 cut(s) 926
AxyI CCTNAGG 1 cut(s) 1494
BauI CACGAG 3 cut(s) 327, 1604, 1709
BbsI GAAGAC 2 cut(s) 1007, 1716
Bbv12I GWGCWC 1 cut(s) 892
BbvI GCAGC 4 cut(s) 784, 1204, 1412, 1691
BccI CCATC 7 cut(s) 560, 596, 640, 676, 866, 1440, 1519
BciT130I CCWGG 1 cut(s) 1593
BclI TGATCA 1 cut(s) 754
BcoDI GTCTC 1 cut(s) 1216
BcuI ACTAGT 1 cut(s) 854
BfaI CTAG 4 cut(s) 855, 927, 1043, 1551
BfmI CTRYAG 2 cut(s) 1218, 1749
BfrI CTTAAG 2 cut(s) 125, 1031
BisI GCNGC 5 cut(s) 798, 1187, 1218, 1401, 1680
BlnI CCTAGG 1 cut(s) 926
BlsI GCNGC 5 cut(s) 799, 1188, 1219, 1402, 1681
Bme1390I CCNGG 1 cut(s) 1593
Bme18I GGWCC 2 cut(s) 215, 317
BmeT110I CYCGRG 1 cut(s) 1634
BmgT120I GGNCC 2 cut(s) 215, 317
BmiI GGNNCC 2 cut(s) 877, 1276
BmrFI CCNGG 1 cut(s) 1593
BmsI GCATC 8 cut(s) 487, 1300, 1341, 1409, 1462, 1519, 1589, 1732
BpiI GAAGAC 2 cut(s) 1007, 1716
Bpu10I CCTNAGC 1 cut(s) 832
Bpu14I TTCGAA 1 cut(s) 1426
BpuEI CTTGAG 3 cut(s) 1121, 1189, 1668
BsaAI YACGTR 1 cut(s) 488
BsaI GGTCTC 1 cut(s) 1216
BsaJI CCNNGG 4 cut(s) 879, 926, 1592, 1628
BsaWI WCCGGW 1 cut(s) 1173
BsaXI ACNNNNNCTCC 2 cut(s) 591, 621
Bsc4I CCNNNNNNNGG 2 cut(s) 1151, 1634
Bse21I CCTNAGG 1 cut(s) 1494
Bse3DI GCAATG 2 cut(s) 984, 1669
BseBI CCWGG 1 cut(s) 1593
BseDI CCNNGG 4 cut(s) 879, 926, 1592, 1628
BseGI GGATG 8 cut(s) 547, 556, 1356, 1424, 1477, 1534, 1560, 1747
BseLI CCNNNNNNNGG 2 cut(s) 1151, 1634
BseMI GCAATG 2 cut(s) 984, 1669
BseMII CTCAG 2 cut(s) 846, 1508
BseRI GAGGAG 5 cut(s) 533, 536, 560, 601, 1267
BseXI GCAGC 4 cut(s) 784, 1204, 1412, 1691
BsgI GTGCAG 1 cut(s) 1419
Bsh1236I CGCG 2 cut(s) 35, 1048
BshFI GGCC 3 cut(s) 355, 577, 1499
BsiHKAI GWGCWC 1 cut(s) 892
BsiHKCI CYCGRG 1 cut(s) 1634
BsiSI CCGG 1 cut(s) 1174
BslFI GGGAC 1 cut(s) 664
BslI CCNNNNNNNGG 2 cut(s) 1151, 1634
BsmAI GTCTC 1 cut(s) 1216
BsmFI GGGAC 1 cut(s) 664
BsmI GAATGC 2 cut(s) 1422, 1657
BsnI GGCC 3 cut(s) 355, 577, 1499
Bso31I GGTCTC 1 cut(s) 1216
BsoBI CYCGRG 1 cut(s) 1634
Bsp119I TTCGAA 1 cut(s) 1426
Bsp1286I GDGCHC 1 cut(s) 892
Bsp143I GATC 4 cut(s) 754, 849, 1132, 1343
BspACI CCGC 2 cut(s) 800, 1186
BspANI GGCC 3 cut(s) 355, 577, 1499
BspCNI CTCAG 2 cut(s) 845, 1507
BspFNI CGCG 2 cut(s) 35, 1048
BspHI TCATGA 2 cut(s) 766, 1764
BspLI GGNNCC 2 cut(s) 877, 1276
BspMAI CTGCAG 2 cut(s) 1222, 1753
BspQI GCTCTTC 1 cut(s) 915
BspT104I TTCGAA 1 cut(s) 1426
BspTI CTTAAG 2 cut(s) 125, 1031
BspTNI GGTCTC 1 cut(s) 1216
BsrDI GCAATG 2 cut(s) 984, 1669
BssECI CCNNGG 4 cut(s) 879, 926, 1592, 1628
BssMI GATC 4 cut(s) 754, 849, 1132, 1343
BssSI CACGAG 3 cut(s) 327, 1604, 1709
BssT1I CCWWGG 2 cut(s) 879, 926
Bst2BI CACGAG 3 cut(s) 327, 1604, 1709
Bst2UI CCWGG 1 cut(s) 1593
Bst4CI ACNGT 5 cut(s) 267, 290, 899, 1019, 1293
Bst6I CTCTTC 3 cut(s) 531, 915, 1103
BstAFI CTTAAG 2 cut(s) 125, 1031
BstBAI YACGTR 1 cut(s) 488
BstBI TTCGAA 1 cut(s) 1426
BstC8I GCNNGC 2 cut(s) 735, 1576
BstDEI CTNAG 6 cut(s) 374, 832, 941, 993, 1385, 1494
BstF5I GGATG 8 cut(s) 547, 556, 1356, 1424, 1477, 1534, 1560, 1747
BstFNI CGCG 2 cut(s) 35, 1048
BstHHI GCGC 3 cut(s) 124, 1048, 1580
BstKTI GATC 4 cut(s) 757, 852, 1135, 1346
BstMAI GTCTC 1 cut(s) 1216
BstMBI GATC 4 cut(s) 754, 849, 1132, 1343
BstMWI GCNNNNNNNGC 2 cut(s) 218, 1310
BstNI CCWGG 1 cut(s) 1593
BstSCI CCNGG 1 cut(s) 1591
BstSFI CTRYAG 2 cut(s) 1218, 1749
BstUI CGCG 2 cut(s) 35, 1048
BstV1I GCAGC 4 cut(s) 784, 1204, 1412, 1691
BstV2I GAAGAC 2 cut(s) 1007, 1716
Bsu36I CCTNAGG 1 cut(s) 1494
BsuRI GGCC 3 cut(s) 355, 577, 1499
BtsCI GGATG 8 cut(s) 547, 556, 1356, 1424, 1477, 1534, 1560, 1747
Cac8I GCNNGC 2 cut(s) 735, 1576
CciI TCATGA 2 cut(s) 766, 1764
CfoI GCGC 3 cut(s) 124, 1048, 1580
Cfr13I GGNCC 2 cut(s) 215, 317
Csp6I GTAC 1 cut(s) 1090
CviAII CATG 7 cut(s) 659, 767, 967, 1005, 1093, 1193, 1765
CviQI GTAC 1 cut(s) 1090
DdeI CTNAG 6 cut(s) 374, 832, 941, 993, 1385, 1494
DpnI GATC 4 cut(s) 756, 851, 1134, 1345
DpnII GATC 4 cut(s) 754, 849, 1132, 1343
DraIII CACNNNGTG 1 cut(s) 119
Eam1104I CTCTTC 3 cut(s) 531, 915, 1103
EarI CTCTTC 3 cut(s) 531, 915, 1103
Eco130I CCWWGG 2 cut(s) 879, 926
Eco147I AGGCCT 2 cut(s) 355, 1499
Eco31I GGTCTC 1 cut(s) 1216
Eco32I GATATC 2 cut(s) 791, 1490
Eco47I GGWCC 2 cut(s) 215, 317
Eco81I CCTNAGG 1 cut(s) 1494
Eco88I CYCGRG 1 cut(s) 1634
EcoO109I RGGNCCY 1 cut(s) 317
EcoRII CCWGG 1 cut(s) 1591
EcoRV GATATC 2 cut(s) 791, 1490
EcoT14I CCWWGG 2 cut(s) 879, 926
EcoT22I ATGCAT 1 cut(s) 1424
ErhI CCWWGG 2 cut(s) 879, 926
FaeI CATG 7 cut(s) 662, 770, 970, 1008, 1096, 1196, 1768
FalI AAGNNNNNCTT 2 cut(s) 895, 927
FaqI GGGAC 1 cut(s) 664
FatI CATG 7 cut(s) 658, 766, 966, 1004, 1092, 1192, 1764
FauNDI CATATG 1 cut(s) 699
FbaI TGATCA 1 cut(s) 754
Fnu4HI GCNGC 5 cut(s) 798, 1187, 1218, 1401, 1680
FokI GGATG 8 cut(s) 554, 563, 1363, 1431, 1484, 1541, 1567, 1754
Fsp4HI GCNGC 5 cut(s) 798, 1187, 1218, 1401, 1680
FspBI CTAG 4 cut(s) 855, 927, 1043, 1551
FspI TGCGCA 1 cut(s) 1579
GlaI GCGC 3 cut(s) 123, 1047, 1579
GluI GCNGC 5 cut(s) 798, 1187, 1218, 1401, 1680
HaeIII GGCC 3 cut(s) 355, 577, 1499
HapII CCGG 1 cut(s) 1174
HhaI GCGC 3 cut(s) 124, 1048, 1580
Hin1II CATG 7 cut(s) 662, 770, 970, 1008, 1096, 1196, 1768
Hin6I GCGC 3 cut(s) 122, 1046, 1578
HinP1I GCGC 3 cut(s) 122, 1046, 1578
HincII GTYRAC 2 cut(s) 777, 1756
HindII GTYRAC 2 cut(s) 777, 1756
HindIII AAGCTT 4 cut(s) 38, 299, 1034, 1302
HpaI GTTAAC 1 cut(s) 1756
HpaII CCGG 1 cut(s) 1174
HphI GGTGA 7 cut(s) 16, 278, 443, 515, 581, 1117, 1310
Hpy166II GTNNAC 3 cut(s) 777, 951, 1756
Hpy188I TCNGA 9 cut(s) 103, 154, 514, 867, 1445, 1524, 1646, 1673, 1790
Hpy188III TCNNGA 9 cut(s) 44, 619, 767, 903, 1024, 1250, 1685, 1709, 1765
Hpy8I GTNNAC 3 cut(s) 777, 951, 1756
HpyAV CCTTC 3 cut(s) 102, 330, 604
HpyCH4III ACNGT 5 cut(s) 267, 290, 899, 1019, 1293
HpyCH4IV ACGT 2 cut(s) 487, 953
HpyCH4V TGCA 7 cut(s) 367, 1061, 1220, 1354, 1400, 1422, 1751
HpyF10VI GCNNNNNNNGC 2 cut(s) 218, 1310
HpyF3I CTNAG 6 cut(s) 374, 832, 941, 993, 1385, 1494
HpySE526I ACGT 2 cut(s) 487, 953
Hsp92II CATG 7 cut(s) 662, 770, 970, 1008, 1096, 1196, 1768
HspAI GCGC 3 cut(s) 122, 1046, 1578
Ksp22I TGATCA 1 cut(s) 754
KspAI GTTAAC 1 cut(s) 1756
Kzo9I GATC 4 cut(s) 754, 849, 1132, 1343
LguI GCTCTTC 1 cut(s) 915
LmnI GCTCC 3 cut(s) 808, 1280, 1547
Lsp1109I GCAGC 4 cut(s) 784, 1204, 1412, 1691
LweI GCATC 8 cut(s) 487, 1300, 1341, 1409, 1462, 1519, 1589, 1732
MaeI CTAG 4 cut(s) 855, 927, 1043, 1551
MaeII ACGT 2 cut(s) 487, 953
MaeIII GTNAC 5 cut(s) 256, 284, 483, 859, 1514
MalI GATC 4 cut(s) 756, 851, 1134, 1345
MboI GATC 4 cut(s) 754, 849, 1132, 1343
MhlI GDGCHC 1 cut(s) 892
MluCI AATT 6 cut(s) 274, 461, 1327, 1380, 1439, 1508
MlyI GAGTC 4 cut(s) 56, 256, 956, 1730
MmeI TCCRAC 1 cut(s) 222
Mph1103I ATGCAT 1 cut(s) 1424
MroXI GAANNNNTTC 2 cut(s) 614, 1257
MseI TTAA 8 cut(s) 12, 126, 273, 1032, 1158, 1502, 1755, 1775
MslI CAYNNNNRTG 3 cut(s) 207, 411, 673
MspCI CTTAAG 2 cut(s) 125, 1031
MspI CCGG 1 cut(s) 1174
MspR9I CCNGG 1 cut(s) 1593
Mva1269I GAATGC 2 cut(s) 1422, 1657
MvaI CCWGG 1 cut(s) 1593
MvnI CGCG 2 cut(s) 35, 1048
MwoI GCNNNNNNNGC 2 cut(s) 218, 1310
NdeI CATATG 1 cut(s) 699
NdeII GATC 4 cut(s) 754, 849, 1132, 1343
NlaIII CATG 7 cut(s) 662, 770, 970, 1008, 1096, 1196, 1768
NlaIV GGNNCC 2 cut(s) 877, 1276
NmuCI GTSAC 1 cut(s) 284
NsbI TGCGCA 1 cut(s) 1579
NsiI ATGCAT 1 cut(s) 1424
NspV TTCGAA 1 cut(s) 1426
PagI TCATGA 2 cut(s) 766, 1764
PceI AGGCCT 2 cut(s) 355, 1499
PciSI GCTCTTC 1 cut(s) 915
PcsI WCGNNNNNNNCGW 2 cut(s) 32, 1716
PctI GAATGC 2 cut(s) 1422, 1657
PdmI GAANNNNTTC 2 cut(s) 614, 1257
PflMI CCANNNNNTGG 1 cut(s) 1151
PkrI GCNGC 5 cut(s) 799, 1188, 1219, 1402, 1681
PleI GAGTC 4 cut(s) 55, 255, 956, 1729
PpsI GAGTC 4 cut(s) 55, 255, 956, 1729
Ppu21I YACGTR 1 cut(s) 488
PpuMI RGGWCCY 1 cut(s) 317
PshBI ATTAAT 1 cut(s) 273
PsiI TTATAA 1 cut(s) 384
Psp5II RGGWCCY 1 cut(s) 317
Psp6I CCWGG 1 cut(s) 1591
PspGI CCWGG 1 cut(s) 1591
PspN4I GGNNCC 2 cut(s) 877, 1276
PspPI GGNCC 2 cut(s) 215, 317
PspPPI RGGWCCY 1 cut(s) 317
PstI CTGCAG 2 cut(s) 1222, 1753
RsaI GTAC 1 cut(s) 1091
RsaNI GTAC 1 cut(s) 1090
RseI CAYNNNNRTG 3 cut(s) 207, 411, 673
SapI GCTCTTC 1 cut(s) 915
SaqAI TTAA 8 cut(s) 12, 126, 273, 1032, 1158, 1502, 1755, 1775
SatI GCNGC 5 cut(s) 798, 1187, 1218, 1401, 1680
Sau3AI GATC 4 cut(s) 754, 849, 1132, 1343
Sau96I GGNCC 2 cut(s) 215, 317
SchI GAGTC 4 cut(s) 56, 256, 956, 1730
ScrFI CCNGG 1 cut(s) 1593
SduI GDGCHC 1 cut(s) 892
SfaNI GCATC 8 cut(s) 487, 1300, 1341, 1409, 1462, 1519, 1589, 1732
SfcI CTRYAG 2 cut(s) 1218, 1749
SfuI TTCGAA 1 cut(s) 1426
SinI GGWCC 2 cut(s) 215, 317
SmiMI CAYNNNNRTG 3 cut(s) 207, 411, 673
SmlI CTYRAG 5 cut(s) 125, 1031, 1100, 1204, 1683
SmoI CTYRAG 5 cut(s) 125, 1031, 1100, 1204, 1683
SpeI ACTAGT 1 cut(s) 854
Sse9I AATT 6 cut(s) 274, 461, 1327, 1380, 1439, 1508
SseBI AGGCCT 2 cut(s) 355, 1499
SsiI CCGC 2 cut(s) 800, 1186
SspMI CTAG 4 cut(s) 855, 927, 1043, 1551
StuI AGGCCT 2 cut(s) 355, 1499
StyD4I CCNGG 1 cut(s) 1591
StyI CCWWGG 2 cut(s) 879, 926
TaaI ACNGT 5 cut(s) 267, 290, 899, 1019, 1293
TaiI ACGT 2 cut(s) 490, 956
TaqI TCGA 7 cut(s) 158, 450, 886, 1068, 1342, 1426, 1719
TasI AATT 6 cut(s) 274, 461, 1327, 1380, 1439, 1508
TauI GCSGC 1 cut(s) 1189
Tru1I TTAA 8 cut(s) 12, 126, 273, 1032, 1158, 1502, 1755, 1775
Tru9I TTAA 8 cut(s) 12, 126, 273, 1032, 1158, 1502, 1755, 1775
TseFI GTSAC 1 cut(s) 284
TseI GCWGC 4 cut(s) 797, 1217, 1400, 1679
Tsp45I GTSAC 1 cut(s) 284
TspGWI ACGGA 1 cut(s) 1077
Van91I CCANNNNNTGG 1 cut(s) 1151
Vha464I CTTAAG 2 cut(s) 125, 1031
VpaK11BI GGWCC 2 cut(s) 215, 317
VspI ATTAAT 1 cut(s) 273
XapI RAATTY 2 cut(s) 1439, 1508
XmaJI CCTAGG 1 cut(s) 926
XmnI GAANNNNTTC 2 cut(s) 614, 1257
XspI CTAG 4 cut(s) 855, 927, 1043, 1551
Zsp2I ATGCAT 1 cut(s) 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.