Rroxscaffold_7G00184790

Cell division control protein 45 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0016184
Physical Location & Seq
Forward (+)
24091704 .. 24093485
1782 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00184790.1

Sequence Viewer

Length: 1782 bp
ATGGTTAGAGAGCAAACAGTGGAGTCCTTCTACTCGAGGCTCCGCGAATCGGCGATAGCCGCGTCGGGTTCTCCTCTGCTCATATTCCCATCTACTTCAGATGTGGACTCGCTCTGTGCCCTCAAAATCATTTTACATGTGCTTGAATCGGATTCGGTCCGGTACTCGTGTTATCCGGTGTCTTCGTTTCAGGAGATTCACAAGTACGCAGGGCCGGACCTGTGTTCGTCGTCGGAGAATCCGATTTGTATTCTTTTGATCAATTGGGGGTGTCACCGGGACCTGAGGAGGCTGCTGAATTTGTCCCCCGTGGCGCGTGTTTTCGTGGTGGACAGTCACCGGCCGATTCATTTGCATAATCTGAGTGAGCAGAATGATCGTGTGGTTGTGCTTTATACATTGGAAGACGAGAGGCAGGCGGATTTGGCCTATGATATTGAGGATGTTTCGGCTTTGGCTAATGCGAGTGACTTGAATAGTGATGATGAGCTTGATGGGGAGTCGGATAGTGATGGCGATAGTGATAGTGAGAGTGAGGAGGATGGGGATGGGGATGGGTCGAGGAAGAAAAGGAGGGTGTCTGAGGAAGAAGACCCGGTCAAGCTTTTTGGGAAGTTGAAGAAGAAATACTACCATTTGGGTACTTTTCATGGTAAGCCTTCGGGGTGTTTGATGTATGATTTGTCACATTCTTTGAGGAAGAACACGAATGAGTTGCTGTGGTTGTCTTGTGTTTCTTTAACGGATCAGTTTGTGCATGAGAGGTTGACAGATGAGAGGTACCAGGCTGCGGTAATGGAGCTTGAGCAGCATATTAACAGTTCAGGGAATTTGGAGGCAGTGACTTCGGTGACTCTCAAAGACGGGACGAAGATTCGGCTGCCCAGTTCGTCTAGAATTGCATATGAAGATGAGCCTAGACTAATGCTGTTGCAGGAATGGAATTTATTTGATTCCATGATTTGTTCTTCCTACATTGCAACCAAAATGAAGACATGGAGTGACAACGGAATGAAAAAGCTCCAGCTTCTTATTGCAAGGATGGGAATTGCGCTGGTGGATTGCCAACAGAAGTTTCAGTTCATGAATGTTGAAGTGAAAAAAAGGATGAGAGATCAATTTGAACAGTTTTTACCTGAGTATGGACTCACTGATTTCTACTACCGGAGCTTTCTGCGGCTCCACGGTTATGGCTCAAGGGTATCAGCAGCAGATGTGGTGTATGGAGTTACAGCTTTGCTTGAATCGTTTGTAGAGTCAGATGGTTCCTGTGCTGCTAAGCAGTTTGGGGTAGCTTATGATGCACTGTCATTGAACAATCTTGACAAGCTGAAAGCTGGAATGCAGAAAGCAATTCGGGTACAAAGGGCAATTGTTAGACAAGGAAGTAGAGCAGTAACAAAGAGTGGTTGTATAAGAAGTGGAAGGAAATTTAGGTGGGTGAAACTTGAAGATTCTGTAGATGCGAAACTGTTGGGGTACCCCCAGGCATTGACTAAATTGTGCTATTTTGTGATGGATGCTCTGAAAGAGAAGGGAGCTAGAATGAAGCCTTTGGTTTGTGCTTGCTTGGCACAAGAAGCCAAAAAGATGATCATAGTTGGGGTTTGTGGGAAGCCTCGACTGGGAGCAGTTAAAGGAAATTCATTTGGAATTGCATTTCGAACTGCAGCTCAGGAGATTTCTGCAGATTTCTTCCATGAGATGTTTGAGTCTTCATGGATCATCCTGGATTCAGCTCAAGTGAATACCTTTATGATGAGGTTGACTGATAGATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003688 GO:0003690 GO:0003697 GO:0003824 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005656 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006267 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0023052 GO:0031261 GO:0031298 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031570 GO:0031573 GO:0031935 GO:0031938 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0033260 GO:0033262 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0035556 GO:0036387 GO:0036388 GO:0042770 GO:0043138 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043596 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044773 GO:0044774 GO:0044786 GO:0045786 GO:0045787 GO:0045930 GO:0045931 GO:0045934 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0060968 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071163 GO:0071704 GO:0071824 GO:0071840 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072428 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0097159 GO:0140097 GO:1900087 GO:1901360 GO:1901363 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902275 GO:1902292 GO:1902299 GO:1902315 GO:1902402 GO:1902403 GO:1902576 GO:1902806 GO:1902808 GO:1902969 GO:1902975 GO:1902977 GO:1903047 GO:1903463 GO:1903464 GO:1903506 GO:1990837 GO:2000045 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
CDC45

Protein Analysis

593

Amino Acids

66.83

Weight (kDa)

6.07

Isoelectric Point (pI)

43.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC45 PF02724 27 - 591 4.2e-160 CDC45
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016184)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25100
fragaria_vesca FvH4_2g18640
malus_domestica MD05G1172300.v1.1 MD10G1160500.v1.1
prunus_persica Prupe.8G199700_v2.0.a1 Prupe.8G199700_v2.0.a1
pyrus_communis pycom05g15890 pycom10g13870
rosa_chinensis RchiOBHm_Chr6g0284201
rosa_laevigata RLG00000012757
rosa_multiflora Rmu_sc0003778.1_g000001
rosa_roxburghii Rroxscaffold_7G00184790
rosa_rugosa Rorug06G0161800
rosa_samantha Rh6BG275200
rosa_wichuraiana Rw6G023630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 780, 1479
AccB1I GGYRCC 2 cut(s) 780, 1479
AccII CGCG 3 cut(s) 45, 62, 316
AciI CCGC 5 cut(s) 43, 60, 419, 791, 1177
AclWI GGATC 2 cut(s) 753, 1730
AcoI YGGCCR 1 cut(s) 341
AcsI RAATTY 5 cut(s) 298, 829, 943, 1430, 1642
AcuI CTGAAG 1 cut(s) 81
AfaI GTAC 6 cut(s) 164, 206, 643, 782, 1362, 1481
AfiI CCNNNNNNNGG 4 cut(s) 49, 790, 1142, 1625
AflIII ACRYGT 1 cut(s) 136
AgsI TTSAA 8 cut(s) 146, 475, 619, 1094, 1124, 1244, 1315, 1451
AjnI CCWGG 3 cut(s) 783, 1485, 1728
AjuI GAANNNNNNNTTGG 2 cut(s) 1059, 1091
AlwI GGATC 2 cut(s) 753, 1730
Ama87I CYCGRG 1 cut(s) 34
AoxI GGCC 3 cut(s) 212, 341, 426
ApeKI GCWGC 7 cut(s) 292, 788, 808, 880, 1208, 1274, 1670
ApoI RAATTY 5 cut(s) 298, 829, 943, 1430, 1642
Asp718I GGTACC 2 cut(s) 780, 1479
AspLEI GCGC 2 cut(s) 316, 1054
AspS9I GGNCC 4 cut(s) 157, 212, 217, 280
AsuC2I CCSGG 2 cut(s) 278, 596
AsuHPI GGTGA 4 cut(s) 266, 329, 862, 1453
AsuII TTCGAA 1 cut(s) 1663
AvaI CYCGRG 1 cut(s) 34
AvaII GGWCC 3 cut(s) 157, 217, 280
AxyI CCTNAGG 1 cut(s) 284
BaeGI GKGCMC 1 cut(s) 121
BaeI ACNNNNGTAYC 2 cut(s) 154, 187
BanI GGYRCC 2 cut(s) 780, 1479
BarI GAAGNNNNNNTAC 4 cut(s) 611, 614, 643, 646
BauI CACGAG 1 cut(s) 166
BbsI GAAGAC 5 cut(s) 174, 411, 597, 998, 1707
BbvI GCAGC 7 cut(s) 279, 775, 820, 867, 1220, 1261, 1682
BccI CCATC 9 cut(s) 97, 488, 506, 536, 542, 548, 1036, 1256, 1510
BcgI CGANNNNNNTGC 8 cut(s) 334, 359, 368, 393, 697, 731, 828, 862
BciT130I CCWGG 3 cut(s) 785, 1487, 1730
BclI TGATCA 2 cut(s) 258, 1593
BcnI CCSGG 2 cut(s) 278, 596
BfaI CTAG 3 cut(s) 894, 918, 1542
BfmI CTRYAG 3 cut(s) 1458, 1668, 1686
BisI GCNGC 9 cut(s) 60, 293, 789, 809, 881, 1178, 1209, 1275, 1671
BlpI GCTNAGC 1 cut(s) 1278
BlsI GCNGC 9 cut(s) 61, 294, 790, 810, 882, 1179, 1210, 1276, 1672
Bme1390I CCNGG 5 cut(s) 278, 596, 785, 1487, 1730
Bme18I GGWCC 3 cut(s) 157, 217, 280
BmeT110I CYCGRG 1 cut(s) 34
BmgT120I GGNCC 4 cut(s) 157, 212, 217, 280
BmiI GGNNCC 6 cut(s) 41, 281, 782, 1181, 1267, 1481
BmrFI CCNGG 5 cut(s) 278, 596, 785, 1487, 1730
BmrI ACTGGG 2 cut(s) 879, 1634
BmsI GCATC 3 cut(s) 1291, 1453, 1510
BmuI ACTGGG 2 cut(s) 879, 1634
BpiI GAAGAC 5 cut(s) 174, 411, 597, 998, 1707
BpmI CTGGAG 1 cut(s) 1007
Bpu10I CCTNAGC 1 cut(s) 1674
Bpu1102I GCTNAGC 1 cut(s) 1278
Bpu14I TTCGAA 1 cut(s) 1663
BpuEI CTTGAG 3 cut(s) 824, 1180, 1725
BpuMI CCSGG 2 cut(s) 278, 596
BsaJI CCNNGG 3 cut(s) 309, 1183, 1485
BsaWI WCCGGW 3 cut(s) 159, 175, 1164
Bsc4I CCNNNNNNNGG 4 cut(s) 49, 790, 1142, 1625
Bse118I RCCGGY 1 cut(s) 339
Bse1I ACTGG 2 cut(s) 885, 1629
Bse21I CCTNAGG 1 cut(s) 284
Bse3DI GCAATG 1 cut(s) 975
BseBI CCWGG 3 cut(s) 785, 1487, 1730
BseDI CCNNGG 3 cut(s) 309, 1183, 1485
BseGI GGATG 8 cut(s) 448, 547, 553, 559, 1047, 1113, 1525, 1725
BseLI CCNNNNNNNGG 4 cut(s) 49, 790, 1142, 1625
BseMI GCAATG 1 cut(s) 975
BseMII CTCAG 5 cut(s) 275, 353, 573, 1128, 1688
BseNI ACTGG 2 cut(s) 885, 1629
BseRI GAGGAG 3 cut(s) 63, 301, 551
BseSI GKGCMC 1 cut(s) 121
BseX3I CGGCCG 1 cut(s) 341
BseXI GCAGC 7 cut(s) 279, 775, 820, 867, 1220, 1261, 1682
Bsh1236I CGCG 3 cut(s) 45, 62, 316
Bsh1285I CGRYCG 1 cut(s) 344
BshFI GGCC 3 cut(s) 214, 343, 428
BshNI GGYRCC 2 cut(s) 780, 1479
BsiEI CGRYCG 1 cut(s) 344
BsiHKCI CYCGRG 1 cut(s) 34
BsiSI CCGG 7 cut(s) 160, 176, 215, 277, 340, 596, 1165
BslFI GGGAC 3 cut(s) 289, 293, 880
BslI CCNNNNNNNGG 4 cut(s) 49, 790, 1142, 1625
BsmFI GGGAC 3 cut(s) 289, 293, 880
BsmI GAATGC 1 cut(s) 1347
BsnI GGCC 3 cut(s) 214, 343, 428
BsoBI CYCGRG 1 cut(s) 34
Bsp119I TTCGAA 1 cut(s) 1663
Bsp1286I GDGCHC 1 cut(s) 121
Bsp143I GATC 6 cut(s) 258, 376, 745, 1114, 1593, 1722
Bsp1720I GCTNAGC 1 cut(s) 1278
BspACI CCGC 5 cut(s) 43, 60, 419, 791, 1177
BspANI GGCC 3 cut(s) 214, 343, 428
BspCNI CTCAG 5 cut(s) 276, 354, 574, 1129, 1687
BspFNI CGCG 3 cut(s) 45, 62, 316
BspHI TCATGA 1 cut(s) 1083
BspLI GGNNCC 6 cut(s) 41, 281, 782, 1181, 1267, 1481
BspMAI CTGCAG 2 cut(s) 1672, 1690
BspPI GGATC 2 cut(s) 753, 1730
BspT104I TTCGAA 1 cut(s) 1663
BspT107I GGYRCC 2 cut(s) 780, 1479
BsrDI GCAATG 1 cut(s) 975
BsrFI RCCGGY 1 cut(s) 339
BsrI ACTGG 2 cut(s) 885, 1629
BssAI RCCGGY 1 cut(s) 339
BssECI CCNNGG 3 cut(s) 309, 1183, 1485
BssMI GATC 6 cut(s) 258, 376, 745, 1114, 1593, 1722
BssSI CACGAG 1 cut(s) 166
Bst2BI CACGAG 1 cut(s) 166
Bst2UI CCWGG 3 cut(s) 785, 1487, 1730
Bst4CI ACNGT 7 cut(s) 19, 335, 821, 1128, 1187, 1308, 1473
BstBI TTCGAA 1 cut(s) 1663
BstC8I GCNNGC 2 cut(s) 417, 1567
BstDEI CTNAG 6 cut(s) 284, 362, 582, 1137, 1278, 1674
BstDSI CCRYGG 2 cut(s) 309, 1183
BstF5I GGATG 8 cut(s) 448, 547, 553, 559, 1047, 1113, 1525, 1725
BstFNI CGCG 3 cut(s) 45, 62, 316
BstHHI GCGC 2 cut(s) 316, 1054
BstKTI GATC 6 cut(s) 261, 379, 748, 1117, 1596, 1725
BstMBI GATC 6 cut(s) 258, 376, 745, 1114, 1593, 1722
BstMCI CGRYCG 1 cut(s) 344
BstMWI GCNNNNNNNGC 6 cut(s) 59, 425, 808, 1301, 1571, 1580
BstNI CCWGG 3 cut(s) 785, 1487, 1730
BstNSI RCATGY 1 cut(s) 140
BstSCI CCNGG 5 cut(s) 276, 594, 783, 1485, 1728
BstSFI CTRYAG 3 cut(s) 1458, 1668, 1686
BstSLI GKGCMC 1 cut(s) 121
BstUI CGCG 3 cut(s) 45, 62, 316
BstV1I GCAGC 7 cut(s) 279, 775, 820, 867, 1220, 1261, 1682
BstV2I GAAGAC 5 cut(s) 174, 411, 597, 998, 1707
BstXI CCANNNNNNTGG 1 cut(s) 1190
BstZI CGGCCG 1 cut(s) 341
Bsu36I CCTNAGG 1 cut(s) 284
BsuRI GGCC 3 cut(s) 214, 343, 428
BtgI CCRYGG 2 cut(s) 309, 1183
BtsCI GGATG 8 cut(s) 448, 547, 553, 559, 1047, 1113, 1525, 1725
BtsI GCAGTG 1 cut(s) 846
BtsIMutI CAGTG 4 cut(s) 24, 846, 1149, 1304
Cac8I GCNNGC 2 cut(s) 417, 1567
CciI TCATGA 1 cut(s) 1083
CfoI GCGC 2 cut(s) 316, 1054
Cfr10I RCCGGY 1 cut(s) 339
Cfr13I GGNCC 4 cut(s) 157, 212, 217, 280
CpoI CGGWCCG 1 cut(s) 157
CseI GACGC 1 cut(s) 51
Csp6I GTAC 6 cut(s) 163, 205, 642, 781, 1361, 1480
CspI CGGWCCG 1 cut(s) 157
CviAII CATG 8 cut(s) 137, 650, 758, 958, 996, 1084, 1700, 1719
CviQI GTAC 6 cut(s) 163, 205, 642, 781, 1361, 1480
DdeI CTNAG 6 cut(s) 284, 362, 582, 1137, 1278, 1674
DpnI GATC 6 cut(s) 260, 378, 747, 1116, 1595, 1724
DpnII GATC 6 cut(s) 258, 376, 745, 1114, 1593, 1722
EaeI YGGCCR 1 cut(s) 341
EagI CGGCCG 1 cut(s) 341
EciI GGCGGA 1 cut(s) 434
EclXI CGGCCG 1 cut(s) 341
Eco47I GGWCC 3 cut(s) 157, 217, 280
Eco52I CGGCCG 1 cut(s) 341
Eco57I CTGAAG 1 cut(s) 81
Eco81I CCTNAGG 1 cut(s) 284
Eco88I CYCGRG 1 cut(s) 34
EcoO109I RGGNCCY 1 cut(s) 280
EcoRII CCWGG 3 cut(s) 783, 1485, 1728
FaeI CATG 8 cut(s) 140, 653, 761, 961, 999, 1087, 1703, 1722
FaqI GGGAC 3 cut(s) 289, 293, 880
FatI CATG 8 cut(s) 136, 649, 757, 957, 995, 1083, 1699, 1718
FauNDI CATATG 1 cut(s) 904
FbaI TGATCA 2 cut(s) 258, 1593
Fnu4HI GCNGC 9 cut(s) 60, 293, 789, 809, 881, 1178, 1209, 1275, 1671
FokI GGATG 8 cut(s) 455, 554, 560, 566, 1054, 1120, 1532, 1712
Fsp4HI GCNGC 9 cut(s) 60, 293, 789, 809, 881, 1178, 1209, 1275, 1671
FspBI CTAG 3 cut(s) 894, 918, 1542
GlaI GCGC 2 cut(s) 315, 1053
GluI GCNGC 9 cut(s) 60, 293, 789, 809, 881, 1178, 1209, 1275, 1671
GsuI CTGGAG 1 cut(s) 1007
HaeIII GGCC 3 cut(s) 214, 343, 428
HapII CCGG 7 cut(s) 160, 176, 215, 277, 340, 596, 1165
HgaI GACGC 1 cut(s) 51
HhaI GCGC 2 cut(s) 316, 1054
Hin1II CATG 8 cut(s) 140, 653, 761, 961, 999, 1087, 1703, 1722
Hin6I GCGC 2 cut(s) 314, 1052
HinP1I GCGC 2 cut(s) 314, 1052
HincII GTYRAC 2 cut(s) 768, 1767
HindII GTYRAC 2 cut(s) 768, 1767
HindIII AAGCTT 1 cut(s) 602
HpaII CCGG 7 cut(s) 160, 176, 215, 277, 340, 596, 1165
HphI GGTGA 4 cut(s) 266, 329, 862, 1453
Hpy166II GTNNAC 4 cut(s) 106, 331, 768, 1767
Hpy188I TCNGA 9 cut(s) 100, 151, 235, 243, 363, 505, 583, 1261, 1527
Hpy188III TCNNGA 5 cut(s) 191, 894, 1084, 1322, 1676
Hpy8I GTNNAC 4 cut(s) 106, 331, 768, 1767
Hpy99I CGWCG 3 cut(s) 67, 232, 235
HpyAV CCTTC 4 cut(s) 37, 669, 1419, 1528
HpyCH4III ACNGT 7 cut(s) 19, 335, 821, 1128, 1187, 1308, 1473
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 425, 808, 1301, 1571, 1580
HpyF3I CTNAG 6 cut(s) 284, 362, 582, 1137, 1278, 1674
Hsp92II CATG 8 cut(s) 140, 653, 761, 961, 999, 1087, 1703, 1722
HspAI GCGC 2 cut(s) 314, 1052
KpnI GGTACC 2 cut(s) 784, 1483
Ksp22I TGATCA 2 cut(s) 258, 1593
Kzo9I GATC 6 cut(s) 258, 376, 745, 1114, 1593, 1722
LmnI GCTCC 7 cut(s) 45, 799, 1026, 1167, 1185, 1538, 1628
Lsp1109I GCAGC 7 cut(s) 279, 775, 820, 867, 1220, 1261, 1682
LweI GCATC 3 cut(s) 1291, 1453, 1510
MaeI CTAG 3 cut(s) 894, 918, 1542
MaeIII GTNAC 9 cut(s) 272, 335, 467, 684, 841, 850, 1001, 1228, 1396
MalI GATC 6 cut(s) 260, 378, 747, 1116, 1595, 1724
MboI GATC 6 cut(s) 258, 376, 745, 1114, 1593, 1722
MfeI CAATTG 2 cut(s) 262, 1371
MhlI GDGCHC 1 cut(s) 121
MlyI GAGTC 7 cut(s) 32, 101, 509, 847, 1140, 1265, 1721
MmeI TCCRAC 2 cut(s) 213, 483
MseI TTAA 3 cut(s) 740, 816, 1635
MslI CAYNNNNRTG 1 cut(s) 1188
MspI CCGG 7 cut(s) 160, 176, 215, 277, 340, 596, 1165
MspR9I CCNGG 5 cut(s) 278, 596, 785, 1487, 1730
MunI CAATTG 2 cut(s) 262, 1371
Mva1269I GAATGC 1 cut(s) 1347
MvaI CCWGG 3 cut(s) 785, 1487, 1730
MvnI CGCG 3 cut(s) 45, 62, 316
MwoI GCNNNNNNNGC 6 cut(s) 59, 425, 808, 1301, 1571, 1580
NciI CCSGG 2 cut(s) 278, 596
NdeI CATATG 1 cut(s) 904
NdeII GATC 6 cut(s) 258, 376, 745, 1114, 1593, 1722
NlaIII CATG 8 cut(s) 140, 653, 761, 961, 999, 1087, 1703, 1722
NlaIV GGNNCC 6 cut(s) 41, 281, 782, 1181, 1267, 1481
NmuCI GTSAC 7 cut(s) 272, 335, 467, 684, 841, 850, 1001
NspI RCATGY 1 cut(s) 140
NspV TTCGAA 1 cut(s) 1663
PaeR7I CTCGAG 1 cut(s) 34
PagI TCATGA 1 cut(s) 1083
PciI ACATGT 1 cut(s) 136
PcsI WCGNNNNNNNCGW 1 cut(s) 239
PctI GAATGC 1 cut(s) 1347
PflFI GACNNNGTC 1 cut(s) 596
PfoI TCCNGGA 1 cut(s) 1728
PkrI GCNGC 9 cut(s) 61, 294, 790, 810, 882, 1179, 1210, 1276, 1672
PleI GAGTC 7 cut(s) 31, 101, 508, 847, 1140, 1264, 1720
PpsI GAGTC 7 cut(s) 31, 101, 508, 847, 1140, 1264, 1720
PpuMI RGGWCCY 1 cut(s) 280
PscI ACATGT 1 cut(s) 136
Psp5II RGGWCCY 1 cut(s) 280
Psp6I CCWGG 3 cut(s) 783, 1485, 1728
PspGI CCWGG 3 cut(s) 783, 1485, 1728
PspN4I GGNNCC 6 cut(s) 41, 281, 782, 1181, 1267, 1481
PspPI GGNCC 4 cut(s) 157, 212, 217, 280
PspPPI RGGWCCY 1 cut(s) 280
PspXI VCTCGAGB 1 cut(s) 34
PsrI GAACNNNNNNTAC 2 cut(s) 1116, 1148
PstI CTGCAG 2 cut(s) 1672, 1690
PsyI GACNNNGTC 1 cut(s) 596
RsaI GTAC 6 cut(s) 164, 206, 643, 782, 1362, 1481
RsaNI GTAC 6 cut(s) 163, 205, 642, 781, 1361, 1480
RseI CAYNNNNRTG 1 cut(s) 1188
Rsr2I CGGWCCG 1 cut(s) 157
RsrII CGGWCCG 1 cut(s) 157
SaqAI TTAA 3 cut(s) 740, 816, 1635
SatI GCNGC 9 cut(s) 60, 293, 789, 809, 881, 1178, 1209, 1275, 1671
Sau3AI GATC 6 cut(s) 258, 376, 745, 1114, 1593, 1722
Sau96I GGNCC 4 cut(s) 157, 212, 217, 280
SchI GAGTC 7 cut(s) 32, 101, 509, 847, 1140, 1265, 1721
ScrFI CCNGG 5 cut(s) 278, 596, 785, 1487, 1730
SduI GDGCHC 1 cut(s) 121
SfaNI GCATC 3 cut(s) 1291, 1453, 1510
SfcI CTRYAG 3 cut(s) 1458, 1668, 1686
Sfr274I CTCGAG 1 cut(s) 34
SfuI TTCGAA 1 cut(s) 1663
SinI GGWCC 3 cut(s) 157, 217, 280
SlaI CTCGAG 1 cut(s) 34
SmiMI CAYNNNNRTG 1 cut(s) 1188
SmlI CTYRAG 4 cut(s) 34, 803, 1195, 1740
SmoI CTYRAG 4 cut(s) 34, 803, 1195, 1740
SsiI CCGC 5 cut(s) 43, 60, 419, 791, 1177
SspMI CTAG 3 cut(s) 894, 918, 1542
StyD4I CCNGG 5 cut(s) 276, 594, 783, 1485, 1728
TaaI ACNGT 7 cut(s) 19, 335, 821, 1128, 1187, 1308, 1473
TaqI TCGA 4 cut(s) 35, 560, 1621, 1663
TaqII GACCGA 1 cut(s) 145
TauI GCSGC 2 cut(s) 62, 1180
Tru1I TTAA 3 cut(s) 740, 816, 1635
Tru9I TTAA 3 cut(s) 740, 816, 1635
TscAI CASTG 4 cut(s) 24, 846, 1156, 1311
TseFI GTSAC 7 cut(s) 272, 335, 467, 684, 841, 850, 1001
TseI GCWGC 7 cut(s) 292, 788, 808, 880, 1208, 1274, 1670
Tsp45I GTSAC 7 cut(s) 272, 335, 467, 684, 841, 850, 1001
TspGWI ACGGA 2 cut(s) 758, 1023
TspRI CASTG 4 cut(s) 24, 846, 1156, 1311
Tth111I GACNNNGTC 1 cut(s) 596
VpaK11BI GGWCC 3 cut(s) 157, 217, 280
XapI RAATTY 5 cut(s) 298, 829, 943, 1430, 1642
XbaI TCTAGA 1 cut(s) 893
XceI RCATGY 1 cut(s) 140
XhoI CTCGAG 1 cut(s) 34
XspI CTAG 3 cut(s) 894, 918, 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.