Prupe.8G199700_v2.0.a1

Cell division control protein 45 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0016184
Physical Location & Seq
Reverse (-)
18943607 .. 18946056
2450 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G199700.2

Sequence Viewer

Length: 1806 bp
ATGGTGAGAGAGAAGACTGTCGAGTCCTTCTACACCAGGCTCCGCGAATCCGCTACGGCGGCGTCTCAATCTCAATCTCCTCTTCTCATATTCCCATCGACTTCGGATGTGGACTCTCTCTGTGCCCTCAAAATCATCTTCCATGTCCTCGAATCCGATTCGGTCCGATACGCCTGCTATCCGGTCTCGTCGTTTCAAGAGATTCACAAGTACGCAGGGCCCGATCTGTGTTCTTCGTCCGAAAACCCGGTTTCAATTCTCTTAATCAATTGGGGTTGCCACAGGGACCTGAGGAAGCTCCTCAATTTGGGGCCCAGGGCTCGTGTTTTTGTGGTTGATAGTCACCGTCCGATTCATTTGCATAACCTGAGTGATCAGAATGATCGTGTGGTTGTGCTCTATACTTTGGATGATGAGAGGCAGACAGATTTGGCATATGATATTGAGGATGTTTCGGCTTTGGCTAATGCCAGTGATTTGAATAGTGACGACGAGCTGGATCCCGAATCGGACAGTGACAGTGATGACGATGAGAATGATGACAGCCAAAGTGAGGAAGAAGAGGAAAATGGAGAAGGGTCGAGAAAGCGAAGAAGGGTGTCTCAGGAAAATGACCCAGTCAAGGTCTTTAGGGAACTGAAGAGGAAATATTATCATTTGGGTACTTTTCATGGTAAGCCTTCAGGGTGTTTGATGTATGATCTGTCACATTCTTTGAGGAAGAACACAAATGAGTTGCTTTGGTTGGCTTGTGTTTCGATAACGGATCAGTTTTTGCACGAGAGGTTAACAGATGAGAGGTACCAAGCTGGGGTGATGGAGCTTGAGCAGTATATTAATAGTTCCGGGAATTTGGAGGCAGTAACTACTGTGACTCTCAAAGATGGGACGAAGATTCGTGCACCCCAGTCGTCTAGAATTACATATGAAGATGAACCTAGACTAATGCTGTTGCAGGAATGGAATTTGTTCGATTCCATGCTTTGCTCTTCATACATTGCAACTAAATTGAAGACATGGAGTGACAATGGGATGAAGAAGCTTAAGCTTCTTCTTGCAAGGATGGGATTTTCGCTTGTGGATTGCCAGCAGAAGTACAAGTACATGGATAAGGAAGTGAAACAGCTGATGAAAGAGGAGTTCGAGCGGTTTTTACCCGAATATGGACTTACAGATTTCTACTACAGGAGCTTTCTGCGGCTCCATGGTTACAGATCAAAGGTATCTGCAGCAGATGTGGTGTATGGAGTTACAGCTCTGCTTGAATCGTATGTGACATCAAATGGTTCTTGTGCTTCCAAAGAGTTTGGGATGGCTTATGATTCATTGTCATTGAACAATCTTGATAAACTGAAAGCCGGAATGCAACAAGCAATTAAGATACAGAGGGCAATTCTTAGACAAGGAAGCATGGCAATAACCAAGAGAGGCTGTATAAGAAGTGGAAGGAAATTTAGGTGGGTGAAACTTGAAGATTCTTTAGATGCAAAATTGTTGGGGTACCCTCAGGCATTGACTAAATTCTGCTATTTCTTGATGGATGGTCTGAGAGAGAAGGGGGCTAGAATGAAACCTCTGGTTTGTGCTTGCTTGGTACAAGAGCCGAAAAAGGTATTGATAGTTGGGGTTTGTGGGAAGCCTCGACTCGGGGCAGTTCAAGGAAACGCATTTGGAATGGCATTTAGAAATGCAGCTCAGGAGATTGGTGCAGAGTTCTTCCATGAGTTGTTTGAGTCTTCATGGATTGTTCTGGAGGCAGCTAAAATGAATAGCTTTATGGTGAGATTGACAGAAGCTGTGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003688 GO:0003690 GO:0003697 GO:0003824 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005656 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006267 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0023052 GO:0031261 GO:0031298 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031570 GO:0031573 GO:0031935 GO:0031938 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0033260 GO:0033262 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0035556 GO:0036387 GO:0036388 GO:0042770 GO:0043138 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043596 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044773 GO:0044774 GO:0044786 GO:0045786 GO:0045787 GO:0045930 GO:0045931 GO:0045934 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0060968 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071163 GO:0071704 GO:0071824 GO:0071840 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072428 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0097159 GO:0140097 GO:1900087 GO:1901360 GO:1901363 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902275 GO:1902292 GO:1902299 GO:1902315 GO:1902402 GO:1902403 GO:1902576 GO:1902806 GO:1902808 GO:1902969 GO:1902975 GO:1902977 GO:1903047 GO:1903463 GO:1903464 GO:1903506 GO:1990837 GO:2000045 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
CDC45

Protein Analysis

602

Amino Acids

68.42

Weight (kDa)

5.95

Isoelectric Point (pI)

46.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016184)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25100
fragaria_vesca FvH4_2g18640
malus_domestica MD05G1172300.v1.1 MD10G1160500.v1.1
prunus_persica Prupe.8G199700_v2.0.a1 Prupe.8G199700_v2.0.a1
pyrus_communis pycom05g15890 pycom10g13870
rosa_chinensis RchiOBHm_Chr6g0284201
rosa_laevigata RLG00000012757
rosa_multiflora Rmu_sc0003778.1_g000001
rosa_roxburghii Rroxscaffold_7G00184790
rosa_rugosa Rorug06G0161800
rosa_samantha Rh6BG275200
rosa_wichuraiana Rw6G023630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 22
Acc65I GGTACC 2 cut(s) 801, 1500
AccB1I GGYRCC 2 cut(s) 801, 1500
AccBSI CCGCTC 1 cut(s) 1147
AccII CGCG 1 cut(s) 45
AciI CCGC 5 cut(s) 43, 51, 59, 1147, 1198
AclWI GGATC 3 cut(s) 494, 507, 774
AcsI RAATTY 4 cut(s) 850, 964, 1451, 1520
AcuI CTGAAG 2 cut(s) 659, 666
AcyI GRCGYC 1 cut(s) 62
AfaI GTAC 7 cut(s) 212, 664, 803, 1097, 1103, 1502, 1596
AfiI CCNNNNNNNGG 6 cut(s) 307, 553, 622, 811, 1163, 1646
AflII CTTAAG 1 cut(s) 1043
AgsI TTSAA 8 cut(s) 197, 255, 481, 1012, 1265, 1336, 1472, 1658
AjnI CCWGG 2 cut(s) 35, 314
Alw21I GWGCWC 2 cut(s) 399, 904
Alw26I GTCTC 3 cut(s) 69, 190, 606
Alw44I GTGCAC 1 cut(s) 900
AlwI GGATC 3 cut(s) 494, 507, 774
AlwNI CAGNNNCTG 1 cut(s) 1796
Ama87I CYCGRG 1 cut(s) 1646
AoxI GGCC 2 cut(s) 218, 311
ApaI GGGCCC 2 cut(s) 222, 315
ApaLI GTGCAC 1 cut(s) 900
ApeKI GCWGC 3 cut(s) 1229, 1691, 1757
ApoI RAATTY 4 cut(s) 850, 964, 1451, 1520
AseI ATTAAT 1 cut(s) 837
Asp700I GAANNNNTTC 1 cut(s) 968
Asp718I GGTACC 2 cut(s) 801, 1500
AspS9I GGNCC 6 cut(s) 163, 218, 219, 286, 311, 312
AsuC2I CCSGG 2 cut(s) 248, 847
AsuHPI GGTGA 5 cut(s) 16, 335, 826, 1474, 1792
AvaI CYCGRG 1 cut(s) 1646
AvaII GGWCC 2 cut(s) 163, 286
AxyI CCTNAGG 2 cut(s) 290, 1506
BaeGI GKGCMC 4 cut(s) 127, 222, 315, 904
BamHI GGATCC 1 cut(s) 499
BanI GGYRCC 2 cut(s) 801, 1500
BanII GRGCYC 3 cut(s) 222, 315, 322
BarI GAAGNNNNNNTAC 2 cut(s) 1085, 1117
BauI CACGAG 2 cut(s) 321, 779
BbsI GAAGAC 3 cut(s) 20, 1019, 1728
Bbv12I GWGCWC 2 cut(s) 399, 904
BbvI GCAGC 3 cut(s) 1241, 1703, 1769
BccI CCATC 7 cut(s) 103, 811, 878, 1057, 1306, 1531, 1535
BceAI ACGGC 1 cut(s) 72
BcgI CGANNNNNNTGC 6 cut(s) 156, 190, 340, 374, 891, 925
BciT130I CCWGG 2 cut(s) 37, 316
BclI TGATCA 1 cut(s) 373
BcnI CCSGG 2 cut(s) 248, 847
BcoDI GTCTC 3 cut(s) 69, 190, 606
BfaI CTAG 3 cut(s) 915, 939, 1563
BfmI CTRYAG 2 cut(s) 1183, 1227
BfrI CTTAAG 1 cut(s) 1043
BisI GCNGC 5 cut(s) 60, 1199, 1230, 1692, 1758
BlsI GCNGC 5 cut(s) 61, 1200, 1231, 1693, 1759
Bme1390I CCNGG 4 cut(s) 37, 248, 316, 847
Bme18I GGWCC 2 cut(s) 163, 286
BmeT110I CYCGRG 1 cut(s) 1646
BmgT120I GGNCC 6 cut(s) 163, 218, 219, 286, 311, 312
BmiI GGNNCC 9 cut(s) 41, 220, 287, 312, 313, 501, 803, 1202, 1502
BmrFI CCNGG 4 cut(s) 37, 248, 316, 847
BmrI ACTGGG 2 cut(s) 611, 901
BmsI GCATC 1 cut(s) 1474
BmuI ACTGGG 2 cut(s) 611, 901
BpiI GAAGAC 3 cut(s) 20, 1019, 1728
BpmI CTGGAG 1 cut(s) 1772
Bpu10I CCTNAGC 1 cut(s) 1695
BpuEI CTTGAG 1 cut(s) 845
BpuMI CCSGG 2 cut(s) 248, 847
BsaHI GRCGYC 1 cut(s) 62
BsaI GGTCTC 1 cut(s) 190
BsaJI CCNNGG 3 cut(s) 314, 315, 1204
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 6 cut(s) 307, 553, 622, 811, 1163, 1646
Bse1I ACTGG 3 cut(s) 471, 617, 907
Bse21I CCTNAGG 2 cut(s) 290, 1506
Bse3DI GCAATG 1 cut(s) 996
BseBI CCWGG 2 cut(s) 37, 316
BseDI CCNNGG 3 cut(s) 314, 315, 1204
BseGI GGATG 7 cut(s) 112, 415, 454, 1038, 1068, 1317, 1546
BseLI CCNNNNNNNGG 6 cut(s) 307, 553, 622, 811, 1163, 1646
BseMI GCAATG 1 cut(s) 996
BseMII CTCAG 6 cut(s) 281, 359, 617, 1520, 1538, 1709
BseNI ACTGG 3 cut(s) 471, 617, 907
BseRI GAGGAG 3 cut(s) 69, 290, 1151
BseSI GKGCMC 4 cut(s) 127, 222, 315, 904
BseXI GCAGC 3 cut(s) 1241, 1703, 1769
BseYI CCCAGC 1 cut(s) 809
BsgI GTGCAG 1 cut(s) 1728
Bsh1236I CGCG 1 cut(s) 45
BshFI GGCC 2 cut(s) 220, 313
BshNI GGYRCC 2 cut(s) 801, 1500
BsiHKAI GWGCWC 2 cut(s) 399, 904
BsiHKCI CYCGRG 1 cut(s) 1646
BsiSI CCGG 4 cut(s) 182, 248, 846, 1359
BslFI GGGAC 2 cut(s) 299, 901
BslI CCNNNNNNNGG 6 cut(s) 307, 553, 622, 811, 1163, 1646
BsmAI GTCTC 3 cut(s) 69, 190, 606
BsmBI CGTCTC 1 cut(s) 69
BsmFI GGGAC 2 cut(s) 299, 901
BsmI GAATGC 1 cut(s) 1368
BsnI GGCC 2 cut(s) 220, 313
Bso31I GGTCTC 1 cut(s) 190
BsoBI CYCGRG 1 cut(s) 1646
Bsp120I GGGCCC 2 cut(s) 218, 311
Bsp1286I GDGCHC 6 cut(s) 127, 222, 315, 322, 399, 904
Bsp143I GATC 7 cut(s) 223, 373, 382, 499, 700, 766, 1214
Bsp19I CCATGG 1 cut(s) 1204
BspACI CCGC 5 cut(s) 43, 51, 59, 1147, 1198
BspANI GGCC 2 cut(s) 220, 313
BspCNI CTCAG 6 cut(s) 282, 360, 616, 1519, 1539, 1708
BspFNI CGCG 1 cut(s) 45
BspLI GGNNCC 9 cut(s) 41, 220, 287, 312, 313, 501, 803, 1202, 1502
BspMAI CTGCAG 1 cut(s) 1231
BspPI GGATC 3 cut(s) 494, 507, 774
BspQI GCTCTTC 1 cut(s) 994
BspT107I GGYRCC 2 cut(s) 801, 1500
BspTI CTTAAG 1 cut(s) 1043
BspTNI GGTCTC 1 cut(s) 190
BsrBI CCGCTC 1 cut(s) 1147
BsrDI GCAATG 1 cut(s) 996
BsrI ACTGG 3 cut(s) 471, 617, 907
BssECI CCNNGG 3 cut(s) 314, 315, 1204
BssMI GATC 7 cut(s) 223, 373, 382, 499, 700, 766, 1214
BssNI GRCGYC 1 cut(s) 62
BssSI CACGAG 2 cut(s) 321, 779
BssT1I CCWWGG 1 cut(s) 1204
Bst2BI CACGAG 2 cut(s) 321, 779
Bst2UI CCWGG 2 cut(s) 37, 316
Bst4CI ACNGT 5 cut(s) 19, 347, 515, 521, 871
Bst6I CTCTTC 4 cut(s) 87, 555, 635, 994
BstACI GRCGYC 1 cut(s) 62
BstAFI CTTAAG 1 cut(s) 1043
BstC8I GCNNGC 3 cut(s) 175, 1088, 1588
BstDEI CTNAG 7 cut(s) 290, 368, 603, 1397, 1506, 1547, 1695
BstDSI CCRYGG 1 cut(s) 1204
BstF5I GGATG 7 cut(s) 112, 415, 454, 1038, 1068, 1317, 1546
BstFNI CGCG 1 cut(s) 45
BstKTI GATC 7 cut(s) 226, 376, 385, 502, 703, 769, 1217
BstMAI GTCTC 3 cut(s) 69, 190, 606
BstMBI GATC 7 cut(s) 223, 373, 382, 499, 700, 766, 1214
BstMWI GCNNNNNNNGC 1 cut(s) 59
BstNI CCWGG 2 cut(s) 37, 316
BstSCI CCNGG 4 cut(s) 35, 246, 314, 845
BstSFI CTRYAG 2 cut(s) 1183, 1227
BstSLI GKGCMC 4 cut(s) 127, 222, 315, 904
BstUI CGCG 1 cut(s) 45
BstV1I GCAGC 3 cut(s) 1241, 1703, 1769
BstV2I GAAGAC 3 cut(s) 20, 1019, 1728
BstX2I RGATCY 1 cut(s) 499
BstYI RGATCY 1 cut(s) 499
Bsu36I CCTNAGG 2 cut(s) 290, 1506
BsuRI GGCC 2 cut(s) 220, 313
BtgI CCRYGG 1 cut(s) 1204
BtsCI GGATG 7 cut(s) 112, 415, 454, 1038, 1068, 1317, 1546
BtsIMutI CAGTG 3 cut(s) 478, 520, 526
Cac8I GCNNGC 3 cut(s) 175, 1088, 1588
CaiI CAGNNNCTG 1 cut(s) 1796
Cfr13I GGNCC 6 cut(s) 163, 218, 219, 286, 311, 312
CpoI CGGWCCG 1 cut(s) 163
CseI GACGC 1 cut(s) 51
Csp6I GTAC 7 cut(s) 211, 663, 802, 1096, 1102, 1501, 1595
CspI CGGWCCG 1 cut(s) 163
CviAII CATG 9 cut(s) 143, 671, 979, 1017, 1105, 1205, 1411, 1721, 1740
CviQI GTAC 7 cut(s) 211, 663, 802, 1096, 1102, 1501, 1595
DdeI CTNAG 7 cut(s) 290, 368, 603, 1397, 1506, 1547, 1695
DpnI GATC 7 cut(s) 225, 375, 384, 501, 702, 768, 1216
DpnII GATC 7 cut(s) 223, 373, 382, 499, 700, 766, 1214
DrdI GACNNNNNNGTC 1 cut(s) 22
DseDI GACNNNNNNGTC 1 cut(s) 22
Eam1104I CTCTTC 4 cut(s) 87, 555, 635, 994
EarI CTCTTC 4 cut(s) 87, 555, 635, 994
Eco130I CCWWGG 1 cut(s) 1204
Eco24I GRGCYC 3 cut(s) 222, 315, 322
Eco31I GGTCTC 1 cut(s) 190
Eco47I GGWCC 2 cut(s) 163, 286
Eco57I CTGAAG 2 cut(s) 659, 666
Eco81I CCTNAGG 2 cut(s) 290, 1506
Eco88I CYCGRG 1 cut(s) 1646
EcoO109I RGGNCCY 3 cut(s) 218, 286, 311
EcoRII CCWGG 2 cut(s) 35, 314
EcoT14I CCWWGG 1 cut(s) 1204
EcoT38I GRGCYC 3 cut(s) 222, 315, 322
ErhI CCWWGG 1 cut(s) 1204
Esp3I CGTCTC 1 cut(s) 69
FaeI CATG 9 cut(s) 146, 674, 982, 1020, 1108, 1208, 1414, 1724, 1743
FaqI GGGAC 2 cut(s) 299, 901
FatI CATG 9 cut(s) 142, 670, 978, 1016, 1104, 1204, 1410, 1720, 1739
FauNDI CATATG 2 cut(s) 436, 925
FbaI TGATCA 1 cut(s) 373
Fnu4HI GCNGC 5 cut(s) 60, 1199, 1230, 1692, 1758
FokI GGATG 7 cut(s) 119, 422, 461, 1045, 1075, 1324, 1553
FriOI GRGCYC 3 cut(s) 222, 315, 322
Fsp4HI GCNGC 5 cut(s) 60, 1199, 1230, 1692, 1758
FspBI CTAG 3 cut(s) 915, 939, 1563
GluI GCNGC 5 cut(s) 60, 1199, 1230, 1692, 1758
GsaI CCCAGC 1 cut(s) 813
GsuI CTGGAG 1 cut(s) 1772
HaeIII GGCC 2 cut(s) 220, 313
HapII CCGG 4 cut(s) 182, 248, 846, 1359
HgaI GACGC 1 cut(s) 51
Hin1I GRCGYC 1 cut(s) 62
Hin1II CATG 9 cut(s) 146, 674, 982, 1020, 1108, 1208, 1414, 1724, 1743
HincII GTYRAC 1 cut(s) 789
HindII GTYRAC 1 cut(s) 789
HindIII AAGCTT 2 cut(s) 1040, 1046
HpaI GTTAAC 1 cut(s) 789
HpaII CCGG 4 cut(s) 182, 248, 846, 1359
HphI GGTGA 5 cut(s) 16, 335, 826, 1474, 1792
Hpy166II GTNNAC 3 cut(s) 112, 789, 902
Hpy188I TCNGA 8 cut(s) 106, 157, 167, 241, 351, 378, 511, 1548
Hpy188III TCNNGA 9 cut(s) 197, 503, 582, 605, 915, 1343, 1534, 1697, 1751
Hpy8I GTNNAC 3 cut(s) 112, 789, 902
Hpy99I CGWCG 2 cut(s) 193, 494
HpyAV CCTTC 6 cut(s) 37, 569, 588, 690, 1440, 1549
HpyCH4III ACNGT 5 cut(s) 19, 347, 515, 521, 871
HpyF10VI GCNNNNNNNGC 1 cut(s) 59
HpyF3I CTNAG 7 cut(s) 290, 368, 603, 1397, 1506, 1547, 1695
Hsp92I GRCGYC 1 cut(s) 62
Hsp92II CATG 9 cut(s) 146, 674, 982, 1020, 1108, 1208, 1414, 1724, 1743
KpnI GGTACC 2 cut(s) 805, 1504
Ksp22I TGATCA 1 cut(s) 373
KspAI GTTAAC 1 cut(s) 789
Kzo9I GATC 7 cut(s) 223, 373, 382, 499, 700, 766, 1214
LguI GCTCTTC 1 cut(s) 994
LmnI GCTCC 5 cut(s) 45, 303, 820, 1188, 1206
Lsp1109I GCAGC 3 cut(s) 1241, 1703, 1769
LweI GCATC 1 cut(s) 1474
MaeI CTAG 3 cut(s) 915, 939, 1563
MalI GATC 7 cut(s) 225, 375, 384, 501, 702, 768, 1216
MbiI CCGCTC 1 cut(s) 1147
MboI GATC 7 cut(s) 223, 373, 382, 499, 700, 766, 1214
MfeI CAATTG 1 cut(s) 268
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 6 cut(s) 127, 222, 315, 322, 399, 904
MlyI GAGTC 5 cut(s) 32, 107, 868, 1638, 1742
MroXI GAANNNNTTC 1 cut(s) 968
MseI TTAA 5 cut(s) 263, 788, 837, 1044, 1377
MspA1I CMGCKG 1 cut(s) 1126
MspCI CTTAAG 1 cut(s) 1043
MspI CCGG 4 cut(s) 182, 248, 846, 1359
MspR9I CCNGG 4 cut(s) 37, 248, 316, 847
MunI CAATTG 1 cut(s) 268
Mva1269I GAATGC 1 cut(s) 1368
MvaI CCWGG 2 cut(s) 37, 316
MvnI CGCG 1 cut(s) 45
MwoI GCNNNNNNNGC 1 cut(s) 59
NciI CCSGG 2 cut(s) 248, 847
NcoI CCATGG 1 cut(s) 1204
NdeI CATATG 2 cut(s) 436, 925
NdeII GATC 7 cut(s) 223, 373, 382, 499, 700, 766, 1214
NlaIII CATG 9 cut(s) 146, 674, 982, 1020, 1108, 1208, 1414, 1724, 1743
NlaIV GGNNCC 9 cut(s) 41, 220, 287, 312, 313, 501, 803, 1202, 1502
NmuCI GTSAC 7 cut(s) 341, 485, 515, 705, 871, 1022, 1273
PasI CCCWGGG 1 cut(s) 315
PciSI GCTCTTC 1 cut(s) 994
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 1 cut(s) 1368
PdmI GAANNNNTTC 1 cut(s) 968
PflFI GACNNNGTC 1 cut(s) 617
PfoI TCCNGGA 1 cut(s) 845
PkrI GCNGC 5 cut(s) 61, 1200, 1231, 1693, 1759
PleI GAGTC 5 cut(s) 31, 107, 868, 1638, 1741
PpsI GAGTC 5 cut(s) 31, 107, 868, 1638, 1741
PpuMI RGGWCCY 1 cut(s) 286
PshBI ATTAAT 1 cut(s) 837
Psp5II RGGWCCY 1 cut(s) 286
Psp6I CCWGG 2 cut(s) 35, 314
PspFI CCCAGC 1 cut(s) 809
PspGI CCWGG 2 cut(s) 35, 314
PspN4I GGNNCC 9 cut(s) 41, 220, 287, 312, 313, 501, 803, 1202, 1502
PspOMI GGGCCC 2 cut(s) 218, 311
PspPI GGNCC 6 cut(s) 163, 218, 219, 286, 311, 312
PspPPI RGGWCCY 1 cut(s) 286
PstI CTGCAG 1 cut(s) 1231
PstNI CAGNNNCTG 1 cut(s) 1796
PsuI RGATCY 1 cut(s) 499
PsyI GACNNNGTC 1 cut(s) 617
PvuII CAGCTG 1 cut(s) 1126
RsaI GTAC 7 cut(s) 212, 664, 803, 1097, 1103, 1502, 1596
RsaNI GTAC 7 cut(s) 211, 663, 802, 1096, 1102, 1501, 1595
Rsr2I CGGWCCG 1 cut(s) 163
RsrII CGGWCCG 1 cut(s) 163
SapI GCTCTTC 1 cut(s) 994
SaqAI TTAA 5 cut(s) 263, 788, 837, 1044, 1377
SatI GCNGC 5 cut(s) 60, 1199, 1230, 1692, 1758
Sau3AI GATC 7 cut(s) 223, 373, 382, 499, 700, 766, 1214
Sau96I GGNCC 6 cut(s) 163, 218, 219, 286, 311, 312
SchI GAGTC 5 cut(s) 32, 107, 868, 1638, 1742
ScrFI CCNGG 4 cut(s) 37, 248, 316, 847
SduI GDGCHC 6 cut(s) 127, 222, 315, 322, 399, 904
SfaNI GCATC 1 cut(s) 1474
SfcI CTRYAG 2 cut(s) 1183, 1227
SinI GGWCC 2 cut(s) 163, 286
SmlI CTYRAG 2 cut(s) 824, 1043
SmoI CTYRAG 2 cut(s) 824, 1043
SsiI CCGC 5 cut(s) 43, 51, 59, 1147, 1198
SspI AATATT 1 cut(s) 650
SspMI CTAG 3 cut(s) 915, 939, 1563
StyD4I CCNGG 4 cut(s) 35, 246, 314, 845
StyI CCWWGG 1 cut(s) 1204
TaaI ACNGT 5 cut(s) 19, 347, 515, 521, 871
TaqI TCGA 8 cut(s) 21, 98, 150, 581, 758, 972, 1143, 1642
TaqII GACCGA 1 cut(s) 151
TatI WGTACW 2 cut(s) 1095, 1101
TauI GCSGC 2 cut(s) 62, 1201
Tru1I TTAA 5 cut(s) 263, 788, 837, 1044, 1377
Tru9I TTAA 5 cut(s) 263, 788, 837, 1044, 1377
TscAI CASTG 3 cut(s) 478, 520, 526
TseFI GTSAC 7 cut(s) 341, 485, 515, 705, 871, 1022, 1273
TseI GCWGC 3 cut(s) 1229, 1691, 1757
Tsp45I GTSAC 7 cut(s) 341, 485, 515, 705, 871, 1022, 1273
TspGWI ACGGA 1 cut(s) 779
TspRI CASTG 3 cut(s) 478, 520, 526
Tth111I GACNNNGTC 1 cut(s) 617
Vha464I CTTAAG 1 cut(s) 1043
VneI GTGCAC 1 cut(s) 900
VpaK11BI GGWCC 2 cut(s) 163, 286
VspI ATTAAT 1 cut(s) 837
XapI RAATTY 4 cut(s) 850, 964, 1451, 1520
XbaI TCTAGA 1 cut(s) 914
XmnI GAANNNNTTC 1 cut(s) 968
XspI CTAG 3 cut(s) 915, 939, 1563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.