pycom05g15890

Cell division control protein 45 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0016184
Physical Location & Seq
Reverse (-)
19350576 .. 19352917
2342 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g15890.2

Sequence Viewer

Length: 1968 bp
ATGGTAGTCCACCCTGGGGTGCTCACTTACAATTCTCGCCCCACAGACCAAAGTTCCAAACCAAAAAACCCAATCCAGCGCCAAAATTTCGCCGCGAAAGCTTCGATTTTTGCTTTAGAAACATTGAAATCTCTATGCCCAATTGAGTTCAAACCCTATAAAGTCATGGTGAGAGAGACGACTGTGGAGTCCTTCTACCGGAGGCTCCGTGAGTCCGCAACGGCGTCGTCTCAATCTCCTCTTCTGATATTCCCATCGACTTCAGATGCCGACTCGCTCTGTGCCCTCAAAATCATCTTCCACGTCCTGGAGTCCGATTCGATCCGATACGCGTGCTACCCCGTCTCGTCGTTTCAGGAGATTCACAAGTATGCAGGCCCGGATCTGTGTTCTTCGTCCGAAAACCCGGTTTCGATACTTTTGATCAATTGGGGCTGCCACCGGGACCTGAAGAAGCTCCTCAATTTGTCTCCCAAGGCTCGTGTTTTCGTGGTTGACAGCCATCGTCCGATTCATTTGCATAATCTGAGCGACCATGGAAAATGGAATGATCGTGTGGTTGTGCTTTATACTTTGGATGATGAGAGGCAGGCTGACTTGGCATATGACATTGAGGATGTGTCGGCTTTGGCGAATGCGAGTGACTTGAATAGTGATGATGAATTTGACCCCGAATCGGATAGCGACAGTGACGGTGATGATAGCCAGAGTGAGGAGGAAGAAGAAGGAAATGGAGACGGGTCGAGAAAGCGAAGAAGGGTGGATCAGGAGAACGACCCAGTTAAGCTCTTTCGGGACCTGAAGAGGAAATATTATCATTTGGGTACTTTTCATGGTAAGCCTTCAGGGTGTTTGATGTTTGATTTGTCACATTCTTTGAGGAAGAACACAAATGAGTTGCTTTGGTTGGCTTGCGTTTCGTTAACGGATCAGTTTTTGCACGAGAGGTTAACGGATGAGAGGTACCAAGCTGCGGTGATGGAGCTTGAGCAGTACATTAACAGTTCCGGGAATTTGGAGGCAGTGACTAATGTGACTCTCAAAGATGGCACAAAGATTCGCGTGCCCCAGGCATCTAGAATTACATACGAAGATGAGCCTAGGCTAATGTTGTTGCAGGAGTGGAATTTATTTGATTCTATGCTTTGTTCTTCGTACATTGCTACTAAATTGAAGACGTGGAGTGACAATGGGATGAAGAAGCTCAAGCTTCTTCTTGCAAGGATGGGATTTTCGCTTGTGGATTGCCAGCAGAAATATAGGTACATGGATACAGAAGTGAAACAGCTGATGAAAGAGGAGTTTGAACGGTTTTTACCCGAATATGGACTCACTGATTTCTACTACAGAAGCTTTCTGCGGCTCCATGGTTACAGATCAAGGGTATCTGCAGCAGATGTGGTGTATGGAGTTACAGCGCTGCTTGAATCGTATGTGACATCAGATGGTTCTTGTGCTTCCAAGGAGTTTGGGATGGCTTATGATGCATTGTCGATGAACAATCTCGATAAGTTGAAAGGAGGAATGCAACAAGCAATAAAGATCCAGCGAGCAATTCTAAGGCAAGGAAGCATGGCAATAACCAAGAGAGGCTGCATAAGAAGTGGAAGTAAATTTCGGTGGGTGAAACTTGAAGACTCGTTGGATGCAAAATTGCTGGGGTACCCTCAGGCATTGACGAAATTCTGCTATTTTCTGATGGACGGTCTGAGAGAGAAGGGAGCTCGAATGAAGCCTCTGGTTTGTGCATGCTTGGCACAAGAGCCTAAAAAGGTGTTGATAGTTGGGGTTTGTGGGAAGCCTAGACTTGGAGCGGTTCAAGGAAACGCATTTGGAATCGCGTTCAGAAACGCAGCTCAGGAGATTGGCGCAGAGTTCTTCCATGAGTTGTTTGAGTCCTCGTGGATTGTTCTGGAGGCGGCTAAGATGAATAGCTTCATGGTGAGGCTGACAGAAGCTGTGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0000785 GO:0000790 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003688 GO:0003690 GO:0003697 GO:0003824 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005656 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006267 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0023052 GO:0031261 GO:0031298 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031570 GO:0031573 GO:0031935 GO:0031938 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0033260 GO:0033262 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0035556 GO:0036387 GO:0036388 GO:0042770 GO:0043138 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043596 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044773 GO:0044774 GO:0044786 GO:0045786 GO:0045787 GO:0045930 GO:0045931 GO:0045934 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0060968 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071163 GO:0071704 GO:0071824 GO:0071840 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072428 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0097159 GO:0140097 GO:1900087 GO:1901360 GO:1901363 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902275 GO:1902292 GO:1902299 GO:1902315 GO:1902402 GO:1902403 GO:1902576 GO:1902806 GO:1902808 GO:1902969 GO:1902975 GO:1902977 GO:1903047 GO:1903463 GO:1903464 GO:1903506 GO:1990837 GO:2000045 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
CDC45

Protein Analysis

656

Amino Acids

74.35

Weight (kDa)

6.57

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016184)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25100
fragaria_vesca FvH4_2g18640
malus_domestica MD05G1172300.v1.1 MD10G1160500.v1.1
prunus_persica Prupe.8G199700_v2.0.a1 Prupe.8G199700_v2.0.a1
pyrus_communis pycom05g15890 pycom10g13870
rosa_chinensis RchiOBHm_Chr6g0284201
rosa_laevigata RLG00000012757
rosa_multiflora Rmu_sc0003778.1_g000001
rosa_roxburghii Rroxscaffold_7G00184790
rosa_rugosa Rorug06G0161800
rosa_samantha Rh6BG275200
rosa_wichuraiana Rw6G023630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 187
Acc65I GGTACC 2 cut(s) 963, 1662
AccB1I GGYRCC 2 cut(s) 963, 1662
AccB7I CCANNNNNTGG 1 cut(s) 307
AccBSI CCGCTC 1 cut(s) 1814
AccII CGCG 4 cut(s) 95, 332, 1062, 1841
AciI CCGC 6 cut(s) 93, 216, 974, 1360, 1814, 1919
AclWI GGATC 5 cut(s) 316, 390, 771, 936, 1537
AcsI RAATTY 6 cut(s) 85, 662, 1012, 1126, 1613, 1682
AcuI CTGAAG 4 cut(s) 246, 470, 821, 828
AcyI GRCGYC 1 cut(s) 224
AfaI GTAC 6 cut(s) 826, 965, 995, 1157, 1265, 1664
AfeI AGCGCT 1 cut(s) 1419
AfiI CCNNNNNNNGG 8 cut(s) 16, 198, 307, 676, 712, 973, 1325, 1808
AflIII ACRYGT 1 cut(s) 330
AgsI TTSAA 9 cut(s) 127, 151, 649, 1174, 1307, 1427, 1516, 1634, 1820
AjiI CACGTC 2 cut(s) 304, 1179
AjnI CCWGG 3 cut(s) 13, 306, 1068
Alw21I GWGCWC 2 cut(s) 24, 1726
Alw26I GTCTC 5 cut(s) 170, 234, 349, 474, 729
AlwI GGATC 5 cut(s) 316, 390, 771, 936, 1537
AlwNI CAGNNNCTG 1 cut(s) 1958
Aor51HI AGCGCT 1 cut(s) 1419
AoxI GGCC 1 cut(s) 376
ApeKI GCWGC 6 cut(s) 435, 971, 1391, 1420, 1593, 1853
ApoI RAATTY 6 cut(s) 85, 662, 1012, 1126, 1613, 1682
Asp700I GAANNNNTTC 1 cut(s) 1934
Asp718I GGTACC 2 cut(s) 963, 1662
AspA2I CCTAGG 1 cut(s) 1100
AspLEI GCGC 3 cut(s) 81, 1420, 1871
AspS9I GGNCC 3 cut(s) 377, 445, 796
AsuC2I CCSGG 4 cut(s) 380, 407, 443, 1009
AsuHPI GGTGA 5 cut(s) 181, 707, 988, 1636, 1954
AvaII GGWCC 2 cut(s) 445, 796
AvrII CCTAGG 1 cut(s) 1100
AxyI CCTNAGG 1 cut(s) 1668
BaeGI GKGCMC 2 cut(s) 286, 1068
BaeI ACNNNNGTAYC 2 cut(s) 1263, 1296
BanI GGYRCC 2 cut(s) 963, 1662
BanII GRGCYC 1 cut(s) 1726
BauI CACGAG 3 cut(s) 480, 941, 1900
BbsI GAAGAC 2 cut(s) 1181, 1641
Bbv12I GWGCWC 2 cut(s) 24, 1726
BbvI GCAGC 6 cut(s) 422, 958, 1403, 1407, 1580, 1865
BccI CCATC 8 cut(s) 262, 510, 973, 1040, 1219, 1439, 1468, 1693
BceAI ACGGC 1 cut(s) 237
BcgI CGANNNNNNTGC 6 cut(s) 207, 241, 315, 349, 499, 533
BciT130I CCWGG 3 cut(s) 15, 308, 1070
BciVI GTATCC 1 cut(s) 1264
BclI TGATCA 1 cut(s) 423
BcnI CCSGG 4 cut(s) 380, 407, 443, 1009
BcoDI GTCTC 5 cut(s) 170, 234, 349, 474, 729
BfaI CTAG 3 cut(s) 1077, 1101, 1803
BfmI CTRYAG 2 cut(s) 1345, 1389
BfoI RGCGCY 2 cut(s) 82, 1421
BfuI GTATCC 1 cut(s) 1264
BisI GCNGC 9 cut(s) 93, 436, 972, 1361, 1392, 1421, 1594, 1854, 1920
BlnI CCTAGG 1 cut(s) 1100
BlsI GCNGC 9 cut(s) 94, 437, 973, 1362, 1393, 1422, 1595, 1855, 1921
Bme1390I CCNGG 7 cut(s) 15, 308, 380, 407, 443, 1009, 1070
Bme18I GGWCC 2 cut(s) 445, 796
BmgBI CACGTC 2 cut(s) 304, 1179
BmgT120I GGNCC 3 cut(s) 377, 445, 796
BmiI GGNNCC 6 cut(s) 206, 446, 797, 965, 1364, 1664
BmrFI CCNGG 7 cut(s) 15, 308, 380, 407, 443, 1009, 1070
BmrI ACTGGG 1 cut(s) 773
BmsI GCATC 4 cut(s) 256, 1082, 1474, 1636
BmuI ACTGGG 1 cut(s) 773
BpiI GAAGAC 2 cut(s) 1181, 1641
BpmI CTGGAG 2 cut(s) 329, 1934
Bpu10I CCTNAGC 1 cut(s) 1857
BpuEI CTTGAG 2 cut(s) 1007, 1190
BpuMI CCSGG 4 cut(s) 380, 407, 443, 1009
BsaHI GRCGYC 1 cut(s) 224
BsaJI CCNNGG 8 cut(s) 13, 14, 474, 535, 1068, 1100, 1366, 1461
BsaWI WCCGGW 1 cut(s) 198
BsaXI ACNNNNNCTCC 2 cut(s) 193, 223
Bsc4I CCNNNNNNNGG 8 cut(s) 16, 198, 307, 676, 712, 973, 1325, 1808
Bse1I ACTGG 1 cut(s) 779
Bse21I CCTNAGG 1 cut(s) 1668
Bse3DI GCAATG 1 cut(s) 1158
BseBI CCWGG 3 cut(s) 15, 308, 1070
BseDI CCNNGG 8 cut(s) 13, 14, 474, 535, 1068, 1100, 1366, 1461
BseGI GGATG 7 cut(s) 583, 622, 961, 1200, 1230, 1479, 1651
BseLI CCNNNNNNNGG 8 cut(s) 16, 198, 307, 676, 712, 973, 1325, 1808
BseMI GCAATG 1 cut(s) 1158
BseMII CTCAG 4 cut(s) 518, 1682, 1700, 1871
BseNI ACTGG 1 cut(s) 779
BseRI GAGGAG 4 cut(s) 228, 449, 728, 1313
BseSI GKGCMC 2 cut(s) 286, 1068
BseXI GCAGC 6 cut(s) 422, 958, 1403, 1407, 1580, 1865
BseYI CCCAGC 1 cut(s) 1657
Bsh1236I CGCG 4 cut(s) 95, 332, 1062, 1841
BshFI GGCC 1 cut(s) 378
BshNI GGYRCC 2 cut(s) 963, 1662
BsiHKAI GWGCWC 2 cut(s) 24, 1726
BsiSI CCGG 5 cut(s) 199, 380, 407, 442, 1008
BslFI GGGAC 2 cut(s) 458, 809
BslI CCNNNNNNNGG 8 cut(s) 16, 198, 307, 676, 712, 973, 1325, 1808
BsmAI GTCTC 5 cut(s) 170, 234, 349, 474, 729
BsmBI CGTCTC 4 cut(s) 170, 234, 349, 729
BsmFI GGGAC 2 cut(s) 458, 809
BsmI GAATGC 2 cut(s) 640, 1530
BsnI GGCC 1 cut(s) 378
Bsp1286I GDGCHC 4 cut(s) 24, 286, 1068, 1726
Bsp143I GATC 8 cut(s) 321, 382, 423, 550, 763, 928, 1376, 1542
Bsp19I CCATGG 2 cut(s) 535, 1366
BspACI CCGC 6 cut(s) 93, 216, 974, 1360, 1814, 1919
BspANI GGCC 1 cut(s) 378
BspCNI CTCAG 4 cut(s) 519, 1681, 1701, 1870
BspFNI CGCG 4 cut(s) 95, 332, 1062, 1841
BspLI GGNNCC 6 cut(s) 206, 446, 797, 965, 1364, 1664
BspMAI CTGCAG 1 cut(s) 1393
BspPI GGATC 5 cut(s) 316, 390, 771, 936, 1537
BspT107I GGYRCC 2 cut(s) 963, 1662
BsrBI CCGCTC 1 cut(s) 1814
BsrDI GCAATG 1 cut(s) 1158
BsrI ACTGG 1 cut(s) 779
BssECI CCNNGG 8 cut(s) 13, 14, 474, 535, 1068, 1100, 1366, 1461
BssMI GATC 8 cut(s) 321, 382, 423, 550, 763, 928, 1376, 1542
BssNI GRCGYC 1 cut(s) 224
BssSI CACGAG 3 cut(s) 480, 941, 1900
BssT1I CCWWGG 5 cut(s) 474, 535, 1100, 1366, 1461
Bst2BI CACGAG 3 cut(s) 480, 941, 1900
Bst2UI CCWGG 3 cut(s) 15, 308, 1070
Bst4CI ACNGT 6 cut(s) 184, 689, 695, 1004, 1311, 1706
Bst6I CTCTTC 2 cut(s) 246, 797
BstACI GRCGYC 1 cut(s) 224
BstC8I GCNNGC 8 cut(s) 334, 376, 591, 913, 1064, 1250, 1551, 1750
BstDEI CTNAG 6 cut(s) 527, 1559, 1668, 1709, 1857, 1923
BstDSI CCRYGG 2 cut(s) 535, 1366
BstF5I GGATG 7 cut(s) 583, 622, 961, 1200, 1230, 1479, 1651
BstFNI CGCG 4 cut(s) 95, 332, 1062, 1841
BstH2I RGCGCY 2 cut(s) 82, 1421
BstHHI GCGC 3 cut(s) 81, 1420, 1871
BstKTI GATC 8 cut(s) 324, 385, 426, 553, 766, 931, 1379, 1545
BstMAI GTCTC 5 cut(s) 170, 234, 349, 474, 729
BstMBI GATC 8 cut(s) 321, 382, 423, 550, 763, 928, 1376, 1542
BstMWI GCNNNNNNNGC 4 cut(s) 98, 599, 1484, 1754
BstNI CCWGG 3 cut(s) 15, 308, 1070
BstNSI RCATGY 1 cut(s) 1752
BstSCI CCNGG 7 cut(s) 13, 306, 378, 405, 441, 1007, 1068
BstSFI CTRYAG 2 cut(s) 1345, 1389
BstSLI GKGCMC 2 cut(s) 286, 1068
BstUI CGCG 4 cut(s) 95, 332, 1062, 1841
BstV1I GCAGC 6 cut(s) 422, 958, 1403, 1407, 1580, 1865
BstV2I GAAGAC 2 cut(s) 1181, 1641
BstX2I RGATCY 2 cut(s) 382, 1542
BstYI RGATCY 2 cut(s) 382, 1542
Bsu36I CCTNAGG 1 cut(s) 1668
BsuI GTATCC 1 cut(s) 1264
BsuRI GGCC 1 cut(s) 378
BtgI CCRYGG 2 cut(s) 535, 1366
BtrI CACGTC 2 cut(s) 304, 1179
BtsCI GGATG 7 cut(s) 583, 622, 961, 1200, 1230, 1479, 1651
BtsI GCAGTG 1 cut(s) 1029
BtsIMutI CAGTG 3 cut(s) 694, 1029, 1332
Cac8I GCNNGC 8 cut(s) 334, 376, 591, 913, 1064, 1250, 1551, 1750
CaiI CAGNNNCTG 1 cut(s) 1958
CfoI GCGC 3 cut(s) 81, 1420, 1871
Cfr13I GGNCC 3 cut(s) 377, 445, 796
CseI GACGC 1 cut(s) 213
Csp6I GTAC 6 cut(s) 825, 964, 994, 1156, 1264, 1663
CviAII CATG 9 cut(s) 166, 536, 833, 1267, 1367, 1573, 1749, 1883, 1939
CviQI GTAC 6 cut(s) 825, 964, 994, 1156, 1264, 1663
DdeI CTNAG 6 cut(s) 527, 1559, 1668, 1709, 1857, 1923
DpnI GATC 8 cut(s) 323, 384, 425, 552, 765, 930, 1378, 1544
DpnII GATC 8 cut(s) 321, 382, 423, 550, 763, 928, 1376, 1542
DrdI GACNNNNNNGTC 1 cut(s) 187
DseDI GACNNNNNNGTC 1 cut(s) 187
Eam1104I CTCTTC 2 cut(s) 246, 797
EarI CTCTTC 2 cut(s) 246, 797
Ecl136II GAGCTC 1 cut(s) 1724
Eco130I CCWWGG 5 cut(s) 474, 535, 1100, 1366, 1461
Eco24I GRGCYC 1 cut(s) 1726
Eco47I GGWCC 2 cut(s) 445, 796
Eco47III AGCGCT 1 cut(s) 1419
Eco53kI GAGCTC 1 cut(s) 1724
Eco57I CTGAAG 4 cut(s) 246, 470, 821, 828
Eco81I CCTNAGG 1 cut(s) 1668
EcoICRI GAGCTC 1 cut(s) 1724
EcoO109I RGGNCCY 2 cut(s) 445, 796
EcoRII CCWGG 3 cut(s) 13, 306, 1068
EcoT14I CCWWGG 5 cut(s) 474, 535, 1100, 1366, 1461
EcoT22I ATGCAT 1 cut(s) 1489
EcoT38I GRGCYC 1 cut(s) 1726
ErhI CCWWGG 5 cut(s) 474, 535, 1100, 1366, 1461
Esp3I CGTCTC 4 cut(s) 170, 234, 349, 729
FaeI CATG 9 cut(s) 169, 539, 836, 1270, 1370, 1576, 1752, 1886, 1942
FaqI GGGAC 2 cut(s) 458, 809
FatI CATG 9 cut(s) 165, 535, 832, 1266, 1366, 1572, 1748, 1882, 1938
FauNDI CATATG 1 cut(s) 604
FbaI TGATCA 1 cut(s) 423
Fnu4HI GCNGC 9 cut(s) 93, 436, 972, 1361, 1392, 1421, 1594, 1854, 1920
FokI GGATG 7 cut(s) 590, 629, 968, 1207, 1237, 1486, 1658
FriOI GRGCYC 1 cut(s) 1726
Fsp4HI GCNGC 9 cut(s) 93, 436, 972, 1361, 1392, 1421, 1594, 1854, 1920
FspBI CTAG 3 cut(s) 1077, 1101, 1803
GlaI GCGC 3 cut(s) 80, 1419, 1870
GluI GCNGC 9 cut(s) 93, 436, 972, 1361, 1392, 1421, 1594, 1854, 1920
GsaI CCCAGC 1 cut(s) 1661
GsuI CTGGAG 2 cut(s) 329, 1934
HaeII RGCGCY 2 cut(s) 82, 1421
HaeIII GGCC 1 cut(s) 378
HapII CCGG 5 cut(s) 199, 380, 407, 442, 1008
HgaI GACGC 1 cut(s) 213
HhaI GCGC 3 cut(s) 81, 1420, 1871
Hin1I GRCGYC 1 cut(s) 224
Hin1II CATG 9 cut(s) 169, 539, 836, 1270, 1370, 1576, 1752, 1886, 1942
Hin6I GCGC 3 cut(s) 79, 1418, 1869
HinP1I GCGC 3 cut(s) 79, 1418, 1869
HincII GTYRAC 3 cut(s) 496, 924, 951
HindII GTYRAC 3 cut(s) 496, 924, 951
HindIII AAGCTT 3 cut(s) 99, 1208, 1351
HpaI GTTAAC 2 cut(s) 924, 951
HpaII CCGG 5 cut(s) 199, 380, 407, 442, 1008
HphI GGTGA 5 cut(s) 181, 707, 988, 1636, 1954
Hpy166II GTNNAC 4 cut(s) 10, 496, 924, 951
Hpy188III TCNNGA 8 cut(s) 356, 744, 767, 794, 1077, 1505, 1859, 1913
Hpy8I GTNNAC 4 cut(s) 10, 496, 924, 951
Hpy99I CGWCG 2 cut(s) 229, 352
HpyAV CCTTC 5 cut(s) 202, 719, 750, 852, 1711
HpyCH4III ACNGT 6 cut(s) 184, 689, 695, 1004, 1311, 1706
HpyCH4IV ACGT 2 cut(s) 303, 1178
HpyF10VI GCNNNNNNNGC 4 cut(s) 98, 599, 1484, 1754
HpyF3I CTNAG 6 cut(s) 527, 1559, 1668, 1709, 1857, 1923
HpySE526I ACGT 2 cut(s) 303, 1178
Hsp92I GRCGYC 1 cut(s) 224
Hsp92II CATG 9 cut(s) 169, 539, 836, 1270, 1370, 1576, 1752, 1886, 1942
HspAI GCGC 3 cut(s) 79, 1418, 1869
KpnI GGTACC 2 cut(s) 967, 1666
Ksp22I TGATCA 1 cut(s) 423
KspAI GTTAAC 2 cut(s) 924, 951
Kzo9I GATC 8 cut(s) 321, 382, 423, 550, 763, 928, 1376, 1542
LmnI GCTCC 6 cut(s) 210, 462, 982, 1368, 1721, 1811
Lsp1109I GCAGC 6 cut(s) 422, 958, 1403, 1407, 1580, 1865
LweI GCATC 4 cut(s) 256, 1082, 1474, 1636
MaeI CTAG 3 cut(s) 1077, 1101, 1803
MaeII ACGT 2 cut(s) 303, 1178
MaeIII GTNAC 9 cut(s) 641, 689, 867, 1024, 1033, 1184, 1370, 1411, 1435
MalI GATC 8 cut(s) 323, 384, 425, 552, 765, 930, 1378, 1544
MbiI CCGCTC 1 cut(s) 1814
MboI GATC 8 cut(s) 321, 382, 423, 550, 763, 928, 1376, 1542
MfeI CAATTG 2 cut(s) 141, 427
MflI RGATCY 2 cut(s) 382, 1542
MhlI GDGCHC 4 cut(s) 24, 286, 1068, 1726
MluI ACGCGT 1 cut(s) 330
MlyI GAGTC 8 cut(s) 197, 221, 266, 320, 1030, 1323, 1631, 1904
MmeI TCCRAC 1 cut(s) 1623
Mph1103I ATGCAT 1 cut(s) 1489
MroXI GAANNNNTTC 1 cut(s) 1934
MseI TTAA 4 cut(s) 783, 923, 950, 999
MslI CAYNNNNRTG 1 cut(s) 369
MspA1I CMGCKG 1 cut(s) 1288
MspI CCGG 5 cut(s) 199, 380, 407, 442, 1008
MspR9I CCNGG 7 cut(s) 15, 308, 380, 407, 443, 1009, 1070
MunI CAATTG 2 cut(s) 141, 427
Mva1269I GAATGC 2 cut(s) 640, 1530
MvaI CCWGG 3 cut(s) 15, 308, 1070
MvnI CGCG 4 cut(s) 95, 332, 1062, 1841
MwoI GCNNNNNNNGC 4 cut(s) 98, 599, 1484, 1754
NciI CCSGG 4 cut(s) 380, 407, 443, 1009
NcoI CCATGG 2 cut(s) 535, 1366
NdeI CATATG 1 cut(s) 604
NdeII GATC 8 cut(s) 321, 382, 423, 550, 763, 928, 1376, 1542
NlaIII CATG 9 cut(s) 169, 539, 836, 1270, 1370, 1576, 1752, 1886, 1942
NlaIV GGNNCC 6 cut(s) 206, 446, 797, 965, 1364, 1664
NmuCI GTSAC 7 cut(s) 641, 689, 867, 1024, 1033, 1184, 1435
NsiI ATGCAT 1 cut(s) 1489
NspI RCATGY 1 cut(s) 1752
PaeI GCATGC 1 cut(s) 1752
PasI CCCWGGG 1 cut(s) 14
PcsI WCGNNNNNNNCGW 1 cut(s) 629
PctI GAATGC 2 cut(s) 640, 1530
PdmI GAANNNNTTC 1 cut(s) 1934
PfeI GAWTC 8 cut(s) 317, 361, 511, 674, 1057, 1136, 1427, 1836
PflMI CCANNNNNTGG 1 cut(s) 307
PfoI TCCNGGA 2 cut(s) 306, 1007
PkrI GCNGC 9 cut(s) 94, 437, 973, 1362, 1393, 1422, 1595, 1855, 1921
PleI GAGTC 8 cut(s) 196, 220, 266, 319, 1030, 1323, 1631, 1903
PpsI GAGTC 8 cut(s) 196, 220, 266, 319, 1030, 1323, 1631, 1903
PpuMI RGGWCCY 2 cut(s) 445, 796
Psp124BI GAGCTC 1 cut(s) 1726
Psp5II RGGWCCY 2 cut(s) 445, 796
Psp6I CCWGG 3 cut(s) 13, 306, 1068
PspFI CCCAGC 1 cut(s) 1657
PspGI CCWGG 3 cut(s) 13, 306, 1068
PspN4I GGNNCC 6 cut(s) 206, 446, 797, 965, 1364, 1664
PspPI GGNCC 3 cut(s) 377, 445, 796
PspPPI RGGWCCY 2 cut(s) 445, 796
PsrI GAACNNNNNNTAC 2 cut(s) 1299, 1331
PstI CTGCAG 1 cut(s) 1393
PstNI CAGNNNCTG 1 cut(s) 1958
PsuI RGATCY 2 cut(s) 382, 1542
PvuII CAGCTG 1 cut(s) 1288
RsaI GTAC 6 cut(s) 826, 965, 995, 1157, 1265, 1664
RsaNI GTAC 6 cut(s) 825, 964, 994, 1156, 1264, 1663
RseI CAYNNNNRTG 1 cut(s) 369
SacI GAGCTC 1 cut(s) 1726
SaqAI TTAA 4 cut(s) 783, 923, 950, 999
SatI GCNGC 9 cut(s) 93, 436, 972, 1361, 1392, 1421, 1594, 1854, 1920
Sau3AI GATC 8 cut(s) 321, 382, 423, 550, 763, 928, 1376, 1542
Sau96I GGNCC 3 cut(s) 377, 445, 796
SchI GAGTC 8 cut(s) 197, 221, 266, 320, 1030, 1323, 1631, 1904
ScrFI CCNGG 7 cut(s) 15, 308, 380, 407, 443, 1009, 1070
SduI GDGCHC 4 cut(s) 24, 286, 1068, 1726
SfaNI GCATC 4 cut(s) 256, 1082, 1474, 1636
SfcI CTRYAG 2 cut(s) 1345, 1389
SinI GGWCC 2 cut(s) 445, 796
SmiMI CAYNNNNRTG 1 cut(s) 369
SmlI CTYRAG 2 cut(s) 986, 1205
SmoI CTYRAG 2 cut(s) 986, 1205
SphI GCATGC 1 cut(s) 1752
SsiI CCGC 6 cut(s) 93, 216, 974, 1360, 1814, 1919
SspI AATATT 1 cut(s) 812
SspMI CTAG 3 cut(s) 1077, 1101, 1803
SstI GAGCTC 1 cut(s) 1726
StyD4I CCNGG 7 cut(s) 13, 306, 378, 405, 441, 1007, 1068
StyI CCWWGG 5 cut(s) 474, 535, 1100, 1366, 1461
TaaI ACNGT 6 cut(s) 184, 689, 695, 1004, 1311, 1706
TaiI ACGT 2 cut(s) 306, 1181
TaqI TCGA 8 cut(s) 104, 257, 320, 413, 743, 1493, 1506, 1726
TatI WGTACW 1 cut(s) 993
TauI GCSGC 3 cut(s) 95, 1363, 1922
TfiI GAWTC 8 cut(s) 317, 361, 511, 674, 1057, 1136, 1427, 1836
Tru1I TTAA 4 cut(s) 783, 923, 950, 999
Tru9I TTAA 4 cut(s) 783, 923, 950, 999
TscAI CASTG 3 cut(s) 694, 1029, 1339
TseFI GTSAC 7 cut(s) 641, 689, 867, 1024, 1033, 1184, 1435
TseI GCWGC 6 cut(s) 435, 971, 1391, 1420, 1593, 1853
Tsp45I GTSAC 7 cut(s) 641, 689, 867, 1024, 1033, 1184, 1435
TspDTI ATGAA 9 cut(s) 503, 675, 821, 1211, 1307, 1511, 1745, 1927, 1943
TspGWI ACGGA 3 cut(s) 197, 941, 968
TspRI CASTG 3 cut(s) 694, 1029, 1339
Van91I CCANNNNNTGG 1 cut(s) 307
VpaK11BI GGWCC 2 cut(s) 445, 796
XapI RAATTY 6 cut(s) 85, 662, 1012, 1126, 1613, 1682
XbaI TCTAGA 1 cut(s) 1076
XceI RCATGY 1 cut(s) 1752
XmaJI CCTAGG 1 cut(s) 1100
XmnI GAANNNNTTC 1 cut(s) 1934
XspI CTAG 3 cut(s) 1077, 1101, 1803
Zsp2I ATGCAT 1 cut(s) 1489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.