AT3G32400

Belongs to the formin-like family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
13356995 .. 13360630
3636 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G32400.1

Sequence Viewer

Length: 1467 bp
ATGGAGCTGCTCAGTTCCATAGCAACAGAAGGGCCTCCTCCACCTCCACCTCCGCCTCTTCTACAACCTCACCATTCTGCACTTTCATCTTCTCCTCTGCCACCACCTTTACCTCCAAAGAAATTGTTAGCTACAACTAATACTCCACCTCCACCACCTCCACCTTTGCATTCTAATTCTCAAATGGGAGCCCCCACAAGTTCTTTGGTGTTGAAATCTCCTCATAATCTTAAAGGTCAGGGTCAAACGAGAAAGGCCAACTTGAAACCGTATCATTGGTTAAAGCTTACTAGAGCAGTGCAAGGAAGTTTATGGGCTGAAGCGCAGAAATCTGATGAAGCTGCAACTGCTCCAGATTTTGACATCTCTGAGATTGAGAAACTCTTCTCAGCAGTGAATCTTAGCTCTAACAGTGAAAATAATGGTGGGAAATCAGGCCGACGTGCCCGACCTAAAGTTGAGAAAGTGCAGCTGATTGAGCTCAAACGAGCATACAACTGTGAGATCATGCTCTCTAAAGTTAAAATACCTCTGCCTGATTTGATGAGTTCTGTTCTTGCTTTGGATGAGTCAGTGATAGATGTTGATCAAGTTGACAATCTAATAAAGTTTTGTCCAACAAAAGAAGAAGCAGAATTGCTCAAGGGCTTCATTGGAAATAAAGAAACTTTGGGGCGGTGTGAGCAGTTCTTTTTAGAACTGTTGAAAGTTCCTCGAGTGGAGACTAAGCTAAGGGTTTTCTCATTCAAGATTCAGTTTCACTCCCAGGTTACTGATCTTAGAAGAGGTTTGAATACCATACATAGTGCAACCAATGAGGCAAGTCGATTTTTCGTGCAAATAGTTAGAGGCTCGACTAAACTAAAAAGAATCATGCAAACTATACTTTCCTTGGGCAATGCATTGAACCACGGGACTGCAAGGGGCTCAGCTATCGGGTTTCACCTGGATAGTCTTCTGAAACTCACTGACACTAGATCCCGTAACATCTTTATCTTTGTGCTTGCCGAGAAGCTTCCAGGGCTACTTAATTTTCCAAAAGACATGGTGAGCTTGGAGGCTGCAACAAATATTCAACTAAAATACCTGGCAGAGGAGATGCAAGCAACTAGCAAAGGGTTGGAGAAAGTTGTACAAGAGTTTACTGCATCTGAAACTGATTGTCAAATATCAAAACACTTTCATATGAACTTGAAAGAGTTTCTTAGCGTTGCTGAAGGAGAAGTAAGGTCCTTGGCTTCTCTCTATTCGACTGTGGGTGGAAGCGCCGATGCTTTGGCGTTATACTTCGGAGAAGATCCAGCTCGTGTCCCATTTGAGCAAGTTGTATCCACTCTGCAAAACTTTGTTAGAATATTTGTGCGGTCACACGAGGAAAACTGCAAGCAAGTTGAGTTTGAGAAGAAGAGAGCACAGAAGGAAGCGGAGAACGAAAAACTTAAGAAAGGTGTTTACAATGAGAACTGA

Protein Analysis

488

Amino Acids

54.15

Weight (kDa)

8.95

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FH2 PF02181 83 - 453 1.5e-90 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 53, 676, 1363, 1424
AclWI GGATC 2 cut(s) 972, 1292
AcuI CTGAAG 2 cut(s) 339, 1236
AfaI GTAC 1 cut(s) 1134
AfiI CCNNNNNNNGG 1 cut(s) 1093
AflII CTTAAG 1 cut(s) 1439
AgsI TTSAA 8 cut(s) 214, 265, 706, 748, 793, 907, 1076, 1195
AjiI CACGTC 1 cut(s) 443
AjnI CCWGG 4 cut(s) 765, 945, 1018, 1086
Alw21I GWGCWC 2 cut(s) 483, 1414
Alw26I GTCTC 1 cut(s) 716
AlwI GGATC 2 cut(s) 972, 1292
Ama87I CYCGRG 1 cut(s) 714
AoxI GGCC 3 cut(s) 32, 255, 436
ApeKI GCWGC 4 cut(s) 7, 341, 469, 1061
Asp700I GAANNNNTTC 1 cut(s) 383
AspLEI GCGC 2 cut(s) 325, 1268
AspS9I GGNCC 2 cut(s) 32, 1230
AsuHPI GGTGA 3 cut(s) 62, 935, 1060
AvaI CYCGRG 1 cut(s) 714
AvaII GGWCC 1 cut(s) 1230
BaeGI GKGCMC 1 cut(s) 448
BanII GRGCYC 3 cut(s) 193, 483, 929
BauI CACGAG 2 cut(s) 1305, 1370
BbsI GAAGAC 1 cut(s) 947
Bbv12I GWGCWC 2 cut(s) 483, 1414
BbvI GCAGC 3 cut(s) 328, 481, 1048
BciT130I CCWGG 4 cut(s) 767, 947, 1020, 1088
BciVI GTATCC 1 cut(s) 1339
BclI TGATCA 1 cut(s) 586
BcoDI GTCTC 1 cut(s) 716
BfaI CTAG 3 cut(s) 291, 975, 1110
BfoI RGCGCY 1 cut(s) 1269
BfrI CTTAAG 1 cut(s) 1439
BfuI GTATCC 1 cut(s) 1339
BisI GCNGC 4 cut(s) 8, 342, 470, 1062
BlpI GCTNAGC 1 cut(s) 928
BlsI GCNGC 4 cut(s) 9, 343, 471, 1063
Bme1390I CCNGG 4 cut(s) 767, 947, 1020, 1088
Bme18I GGWCC 1 cut(s) 1230
BmeT110I CYCGRG 1 cut(s) 714
BmgBI CACGTC 1 cut(s) 443
BmgT120I GGNCC 2 cut(s) 32, 1230
BmiI GGNNCC 1 cut(s) 190
BmrFI CCNGG 4 cut(s) 767, 947, 1020, 1088
BmsI GCATC 3 cut(s) 1089, 1157, 1261
BpiI GAAGAC 1 cut(s) 947
BpmI CTGGAG 1 cut(s) 336
Bpu10I CCTNAGC 1 cut(s) 731
Bpu1102I GCTNAGC 1 cut(s) 928
BpuEI CTTGAG 1 cut(s) 626
BsaBI GATNNNNATC 1 cut(s) 585
BsaJI CCNNGG 5 cut(s) 765, 891, 910, 1019, 1233
BsaXI ACNNNNNCTCC 4 cut(s) 127, 133, 157, 163
Bsc4I CCNNNNNNNGG 1 cut(s) 1093
Bse3DI GCAATG 1 cut(s) 904
Bse8I GATNNNNATC 1 cut(s) 585
BseBI CCWGG 4 cut(s) 767, 947, 1020, 1088
BseDI CCNNGG 5 cut(s) 765, 891, 910, 1019, 1233
BseGI GGATG 1 cut(s) 571
BseJI GATNNNNATC 1 cut(s) 585
BseLI CCNNNNNNNGG 1 cut(s) 1093
BseMI GCAATG 1 cut(s) 904
BseMII CTCAG 4 cut(s) 25, 360, 402, 942
BseRI GAGGAG 4 cut(s) 27, 84, 210, 1109
BseSI GKGCMC 1 cut(s) 448
BseXI GCAGC 3 cut(s) 328, 481, 1048
BsgI GTGCAG 2 cut(s) 63, 488
BshFI GGCC 3 cut(s) 34, 257, 438
BsiHKAI GWGCWC 2 cut(s) 483, 1414
BsiHKCI CYCGRG 1 cut(s) 714
BslFI GGGAC 2 cut(s) 928, 1295
BslI CCNNNNNNNGG 1 cut(s) 1093
BsmAI GTCTC 1 cut(s) 716
BsmFI GGGAC 2 cut(s) 928, 1295
BsmI GAATGC 1 cut(s) 169
BsnI GGCC 3 cut(s) 34, 257, 438
BsoBI CYCGRG 1 cut(s) 714
Bsp1286I GDGCHC 5 cut(s) 193, 448, 483, 929, 1414
Bsp1407I TGTACA 1 cut(s) 1132
Bsp143I GATC 5 cut(s) 504, 586, 775, 977, 1297
Bsp1720I GCTNAGC 1 cut(s) 928
BspACI CCGC 4 cut(s) 53, 676, 1363, 1424
BspANI GGCC 3 cut(s) 34, 257, 438
BspCNI CTCAG 4 cut(s) 24, 361, 401, 941
BspLI GGNNCC 1 cut(s) 190
BspPI GGATC 2 cut(s) 972, 1292
BspTI CTTAAG 1 cut(s) 1439
BsrDI GCAATG 1 cut(s) 904
BsrGI TGTACA 1 cut(s) 1132
BssECI CCNNGG 5 cut(s) 765, 891, 910, 1019, 1233
BssMI GATC 5 cut(s) 504, 586, 775, 977, 1297
BssSI CACGAG 2 cut(s) 1305, 1370
BssT1I CCWWGG 2 cut(s) 891, 1233
Bst2BI CACGAG 2 cut(s) 1305, 1370
Bst2UI CCWGG 4 cut(s) 767, 947, 1020, 1088
Bst4CI ACNGT 5 cut(s) 270, 413, 500, 702, 1255
Bst6I CTCTTC 4 cut(s) 63, 389, 778, 1400
BstAFI CTTAAG 1 cut(s) 1439
BstAUI TGTACA 1 cut(s) 1132
BstC8I GCNNGC 3 cut(s) 1005, 1104, 1385
BstDEI CTNAG 9 cut(s) 11, 369, 388, 401, 726, 731, 779, 928, 1205
BstDSI CCRYGG 1 cut(s) 910
BstENI CCTNNNNNAGG 1 cut(s) 1091
BstF5I GGATG 1 cut(s) 571
BstH2I RGCGCY 1 cut(s) 1269
BstHHI GCGC 2 cut(s) 325, 1268
BstKTI GATC 5 cut(s) 507, 589, 778, 980, 1300
BstMAI GTCTC 1 cut(s) 716
BstMBI GATC 5 cut(s) 504, 586, 775, 977, 1297
BstMWI GCNNNNNNNGC 4 cut(s) 347, 478, 682, 1021
BstNI CCWGG 4 cut(s) 767, 947, 1020, 1088
BstSCI CCNGG 4 cut(s) 765, 945, 1018, 1086
BstSLI GKGCMC 1 cut(s) 448
BstV1I GCAGC 3 cut(s) 328, 481, 1048
BstV2I GAAGAC 1 cut(s) 947
BstX2I RGATCY 2 cut(s) 977, 1297
BstYI RGATCY 2 cut(s) 977, 1297
BsuI GTATCC 1 cut(s) 1339
BsuRI GGCC 3 cut(s) 34, 257, 438
BtgI CCRYGG 1 cut(s) 910
BtrI CACGTC 1 cut(s) 443
BtsCI GGATG 1 cut(s) 571
BtsI GCAGTG 2 cut(s) 303, 399
BtsIMutI CAGTG 5 cut(s) 303, 399, 418, 579, 966
Cac8I GCNNGC 3 cut(s) 1005, 1104, 1385
CfoI GCGC 2 cut(s) 325, 1268
Cfr13I GGNCC 2 cut(s) 32, 1230
Csp6I GTAC 1 cut(s) 1133
CviAII CATG 3 cut(s) 508, 874, 1045
CviQI GTAC 1 cut(s) 1133
DdeI CTNAG 9 cut(s) 11, 369, 388, 401, 726, 731, 779, 928, 1205
DpnI GATC 5 cut(s) 506, 588, 777, 979, 1299
DpnII GATC 5 cut(s) 504, 586, 775, 977, 1297
Eam1104I CTCTTC 4 cut(s) 63, 389, 778, 1400
EarI CTCTTC 4 cut(s) 63, 389, 778, 1400
EciI GGCGGA 1 cut(s) 42
Ecl136II GAGCTC 1 cut(s) 481
Eco130I CCWWGG 2 cut(s) 891, 1233
Eco24I GRGCYC 3 cut(s) 193, 483, 929
Eco47I GGWCC 1 cut(s) 1230
Eco53kI GAGCTC 1 cut(s) 481
Eco57I CTGAAG 2 cut(s) 339, 1236
Eco88I CYCGRG 1 cut(s) 714
EcoICRI GAGCTC 1 cut(s) 481
EcoNI CCTNNNNNAGG 1 cut(s) 1091
EcoO109I RGGNCCY 2 cut(s) 32, 1230
EcoRII CCWGG 4 cut(s) 765, 945, 1018, 1086
EcoT14I CCWWGG 2 cut(s) 891, 1233
EcoT22I ATGCAT 1 cut(s) 904
EcoT38I GRGCYC 3 cut(s) 193, 483, 929
ErhI CCWWGG 2 cut(s) 891, 1233
FaeI CATG 3 cut(s) 511, 877, 1048
FalI AAGNNNNNCTT 4 cut(s) 245, 277, 1188, 1220
FaqI GGGAC 2 cut(s) 928, 1295
FatI CATG 3 cut(s) 507, 873, 1044
FauNDI CATATG 1 cut(s) 1185
FbaI TGATCA 1 cut(s) 586
Fnu4HI GCNGC 4 cut(s) 8, 342, 470, 1062
FokI GGATG 1 cut(s) 578
FriOI GRGCYC 3 cut(s) 193, 483, 929
Fsp4HI GCNGC 4 cut(s) 8, 342, 470, 1062
FspBI CTAG 3 cut(s) 291, 975, 1110
GlaI GCGC 2 cut(s) 324, 1267
GluI GCNGC 4 cut(s) 8, 342, 470, 1062
GsuI CTGGAG 1 cut(s) 336
HaeII RGCGCY 1 cut(s) 1269
HaeIII GGCC 3 cut(s) 34, 257, 438
HhaI GCGC 2 cut(s) 325, 1268
Hin1II CATG 3 cut(s) 511, 877, 1048
Hin6I GCGC 2 cut(s) 323, 1266
HinP1I GCGC 2 cut(s) 323, 1266
HincII GTYRAC 1 cut(s) 595
HindII GTYRAC 1 cut(s) 595
HindIII AAGCTT 2 cut(s) 284, 1013
HinfI GANTC 4 cut(s) 397, 569, 751, 870
HphI GGTGA 3 cut(s) 62, 935, 1060
Hpy166II GTNNAC 3 cut(s) 595, 1143, 1453
Hpy188I TCNGA 5 cut(s) 334, 370, 960, 1153, 1292
Hpy188III TCNNGA 2 cut(s) 353, 748
Hpy8I GTNNAC 3 cut(s) 595, 1143, 1453
Hpy99I CGWCG 1 cut(s) 444
HpyAV CCTTC 3 cut(s) 23, 1211, 1411
HpyCH4III ACNGT 5 cut(s) 270, 413, 500, 702, 1255
HpyCH4IV ACGT 1 cut(s) 442
HpyF10VI GCNNNNNNNGC 4 cut(s) 347, 478, 682, 1021
HpyF3I CTNAG 9 cut(s) 11, 369, 388, 401, 726, 731, 779, 928, 1205
HpySE526I ACGT 1 cut(s) 442
Hsp92II CATG 3 cut(s) 511, 877, 1048
HspAI GCGC 2 cut(s) 323, 1266
Ksp22I TGATCA 1 cut(s) 586
Kzo9I GATC 5 cut(s) 504, 586, 775, 977, 1297
LmnI GCTCC 3 cut(s) 4, 188, 355
Lsp1109I GCAGC 3 cut(s) 328, 481, 1048
LweI GCATC 3 cut(s) 1089, 1157, 1261
MaeI CTAG 3 cut(s) 291, 975, 1110
MaeII ACGT 1 cut(s) 442
MaeIII GTNAC 3 cut(s) 769, 983, 1365
MalI GATC 5 cut(s) 506, 588, 777, 979, 1299
MboI GATC 5 cut(s) 504, 586, 775, 977, 1297
MboII GAAGA 9 cut(s) 50, 81, 376, 638, 795, 947, 1307, 1414, 1417
MflI RGATCY 2 cut(s) 977, 1297
MhlI GDGCHC 5 cut(s) 193, 448, 483, 929, 1414
MluCI AATT 4 cut(s) 122, 175, 635, 1030
MlyI GAGTC 1 cut(s) 578
MmeI TCCRAC 2 cut(s) 641, 1101
Mph1103I ATGCAT 1 cut(s) 904
MroXI GAANNNNTTC 1 cut(s) 383
MseI TTAA 5 cut(s) 231, 281, 522, 1029, 1440
MspA1I CMGCKG 1 cut(s) 472
MspCI CTTAAG 1 cut(s) 1439
MspR9I CCNGG 4 cut(s) 767, 947, 1020, 1088
Mva1269I GAATGC 1 cut(s) 169
MvaI CCWGG 4 cut(s) 767, 947, 1020, 1088
MwoI GCNNNNNNNGC 4 cut(s) 347, 478, 682, 1021
NdeI CATATG 1 cut(s) 1185
NdeII GATC 5 cut(s) 504, 586, 775, 977, 1297
NlaIII CATG 3 cut(s) 511, 877, 1048
NlaIV GGNNCC 1 cut(s) 190
NmeAIII GCCGAG 1 cut(s) 1033
NmuCI GTSAC 1 cut(s) 1365
NsiI ATGCAT 1 cut(s) 904
PaeR7I CTCGAG 1 cut(s) 714
PctI GAATGC 1 cut(s) 169
PdmI GAANNNNTTC 1 cut(s) 383
PfeI GAWTC 3 cut(s) 397, 751, 870
PkrI GCNGC 4 cut(s) 9, 343, 471, 1063
PleI GAGTC 1 cut(s) 577
PpsI GAGTC 1 cut(s) 577
PpuMI RGGWCCY 1 cut(s) 1230
Psp124BI GAGCTC 1 cut(s) 483
Psp5II RGGWCCY 1 cut(s) 1230
Psp6I CCWGG 4 cut(s) 765, 945, 1018, 1086
PspGI CCWGG 4 cut(s) 765, 945, 1018, 1086
PspN4I GGNNCC 1 cut(s) 190
PspPI GGNCC 2 cut(s) 32, 1230
PspPPI RGGWCCY 1 cut(s) 1230
PspXI VCTCGAGB 1 cut(s) 714
PsuI RGATCY 2 cut(s) 977, 1297
PvuII CAGCTG 1 cut(s) 472
RsaI GTAC 1 cut(s) 1134
RsaNI GTAC 1 cut(s) 1133
SacI GAGCTC 1 cut(s) 483
SaqAI TTAA 5 cut(s) 231, 281, 522, 1029, 1440
SatI GCNGC 4 cut(s) 8, 342, 470, 1062
Sau3AI GATC 5 cut(s) 504, 586, 775, 977, 1297
Sau96I GGNCC 2 cut(s) 32, 1230
SchI GAGTC 1 cut(s) 578
ScrFI CCNGG 4 cut(s) 767, 947, 1020, 1088
SduI GDGCHC 5 cut(s) 193, 448, 483, 929, 1414
SfaNI GCATC 3 cut(s) 1089, 1157, 1261
Sfr274I CTCGAG 1 cut(s) 714
SinI GGWCC 1 cut(s) 1230
SlaI CTCGAG 1 cut(s) 714
SmlI CTYRAG 3 cut(s) 641, 714, 1439
SmoI CTYRAG 3 cut(s) 641, 714, 1439
Sse9I AATT 4 cut(s) 122, 175, 635, 1030
SsiI CCGC 4 cut(s) 53, 676, 1363, 1424
SspI AATATT 2 cut(s) 1072, 1356
SspMI CTAG 3 cut(s) 291, 975, 1110
SstI GAGCTC 1 cut(s) 483
StyD4I CCNGG 4 cut(s) 765, 945, 1018, 1086
StyI CCWWGG 2 cut(s) 891, 1233
TaaI ACNGT 5 cut(s) 270, 413, 500, 702, 1255
TaiI ACGT 1 cut(s) 445
TaqI TCGA 4 cut(s) 715, 826, 854, 1250
TasI AATT 4 cut(s) 122, 175, 635, 1030
TatI WGTACW 1 cut(s) 1132
TfiI GAWTC 3 cut(s) 397, 751, 870
Tru1I TTAA 5 cut(s) 231, 281, 522, 1029, 1440
Tru9I TTAA 5 cut(s) 231, 281, 522, 1029, 1440
TscAI CASTG 5 cut(s) 303, 399, 418, 579, 973
TseFI GTSAC 1 cut(s) 1365
TseI GCWGC 4 cut(s) 7, 341, 469, 1061
Tsp45I GTSAC 1 cut(s) 1365
TspDTI ATGAA 5 cut(s) 75, 351, 640, 1172, 1202
TspRI CASTG 5 cut(s) 303, 399, 418, 579, 973
Vha464I CTTAAG 1 cut(s) 1439
VpaK11BI GGWCC 1 cut(s) 1230
XagI CCTNNNNNAGG 1 cut(s) 1091
XcmI CCANNNNNNNNNTGG 1 cut(s) 202
XhoI CTCGAG 1 cut(s) 714
XmnI GAANNNNTTC 1 cut(s) 383
XspI CTAG 3 cut(s) 291, 975, 1110
Zsp2I ATGCAT 1 cut(s) 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.