Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003178

Physical Location & Seq

Genomic Coordinates Reverse (-)

13368435 .. 13369133

Gene Structure 699 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G32410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 699 bp

ATGGAGGAAAAAGATGTTTTACCTATGGAAGCATTTGCTAAGGTTCAAGAGATTTTTAGTGAAGCTGAATGGTTGGATCCAAATTCTGATGTTGCTGTGACTGTATTCAACCAAATAACAGCAACAAATATACTTCAAGAAAGCTTGGATTCAGGTTCTCCTCGAAGCCCTGACTCACGTAGCCTATTGGAATCGACACTTGAGAAAGTTAAGGAGAAAACCAAGTTGATGATAGCGGAAAATATTGTTTCAAGTCCGGATACATCCTCTCCTGAATGGAAAGAGAAAGATACAATGTCATCTCATAAATCTTATGCAGATCCGAATTCAATCCTTAAGAAGGTTGACGAATCGCGTGGACTTCGATTTTCAGTCCAAAGAAATGTTCACTCAAAGATATTTTCACCTCGAATGGTCCAAAGTCCAGTAACATCACCACTTCCAAATCGTAGCCCCACACAAGGATCACCCGCTTCAATATCGAGATTTCACAGCTCCCCCTCTACCCTTGGGATCACTTCAATATTAAATGATCATGGCACATGTAAAGGTGAAGAGTCTACTTCATCATCACCAGCCTCACCTTCAATTTCATTTCTACCAACATTGCATCCGATGACACCATCGCAACCCAAAAATCTTCTCCACAATGTCCACAGTCTCCCACACCTGTTCATTCAAATGGCCCTCCTTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009524 GO:0009555 GO:0009556 GO:0009574 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0030029 GO:0030036 GO:0032501 GO:0032502 GO:0034293 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043934 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044877 GO:0048229 GO:0048236 GO:0048856 GO:0048869 GO:0051015 GO:0051017 GO:0051321 GO:0051704 GO:0061572 GO:0071840 GO:0097435 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2 PTEN_C2

Protein Analysis

232

Amino Acids

25.52

Weight (kDa)

6.06

Isoelectric Point (pI)

73.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003178)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25050 AT3G32400 AT3G32400 AT3G32410
fragaria_vesca	FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080 FvH4_2g41080
malus_domestica	MD00G1143700.v1.1 MD15G1039700.v1.1
prunus_persica	Prupe.1G393200_v2.0.a1
pyrus_communis	pycom08g04710 pycom15g03710
rosa_chinensis	RchiOBHm_Chr6g0299461
rosa_laevigata	RLG00000011429
rosa_multiflora	Rmu_co8403397.1_g000001 Rmu_sc0001184.1_g000009
rosa_roxburghii	Rroxscaffold_7G00168650
rosa_rugosa	Rorug06G0288500 Rorug06G0288600 Rorug06G0288700 Rorug06G0288800 Rorug06G0288900 Rorug06G0288900
rosa_samantha	Rh6AG400300 Rh6BG409000 Rh6CG414400 Rh6DG401400
rosa_wichuraiana	Rw6G035040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	560
AccII	CGCG	1 cut(s)	355
AccIII	TCCGGA	1 cut(s)	256
AciI	CCGC	2 cut(s)	236, 471
AclWI	GGATC	5 cut(s)	71, 84, 314, 472, 521
AcsI	RAATTY	2 cut(s)	82, 325
AcuI	CTGAAG	1 cut(s)	677
AfiI	CCNNNNNNNGG	2 cut(s)	340, 461
AflII	CTTAAG	1 cut(s)	335
AflIII	ACRYGT	1 cut(s)	542
AgsI	TTSAA	9 cut(s)	47, 109, 137, 252, 330, 477, 522, 588, 680
AjuI	GAANNNNNNNTTGG	2 cut(s)	369, 401
AluBI	AGCT	3 cut(s)	65, 144, 495
AluI	AGCT	3 cut(s)	65, 144, 495
Alw26I	GTCTC	1 cut(s)	665
AlwI	GGATC	5 cut(s)	71, 84, 314, 472, 521
Aor13HI	TCCGGA	1 cut(s)	256
AoxI	GGCC	1 cut(s)	684
ApoI	RAATTY	2 cut(s)	82, 325
AspS9I	GGNCC	2 cut(s)	415, 685
AsuHPI	GGTGA	6 cut(s)	396, 426, 459, 563, 564, 573
AvaII	GGWCC	1 cut(s)	415
BamHI	GGATCC	1 cut(s)	76
BccI	CCATC	1 cut(s)	631
BciVI	GTATCC	1 cut(s)	253
BclI	TGATCA	1 cut(s)	532
BcoDI	GTCTC	1 cut(s)	665
BfrI	CTTAAG	1 cut(s)	335
BfuI	GTATCC	1 cut(s)	253
Bme18I	GGWCC	1 cut(s)	415
BmgT120I	GGNCC	2 cut(s)	415, 685
BmiI	GGNNCC	1 cut(s)	78
BmsI	GCATC	1 cut(s)	619
Bpu10I	CCTNAGC	1 cut(s)	39
BpuEI	CTTGAG	1 cut(s)	221
BsaAI	YACGTR	1 cut(s)	179
BsaJI	CCNNGG	1 cut(s)	508
BsaWI	WCCGGW	1 cut(s)	256
BsaXI	ACNNNNNCTCC	2 cut(s)	253, 283
Bsc4I	CCNNNNNNNGG	2 cut(s)	340, 461
Bse1I	ACTGG	1 cut(s)	425
Bse3DI	GCAATG	1 cut(s)	605
BseAI	TCCGGA	1 cut(s)	256
BseDI	CCNNGG	1 cut(s)	508
BseGI	GGATG	2 cut(s)	263, 610
BseLI	CCNNNNNNNGG	2 cut(s)	340, 461
BseMI	GCAATG	1 cut(s)	605
BseNI	ACTGG	1 cut(s)	425
BseRI	GAGGAG	1 cut(s)	150
Bsh1236I	CGCG	1 cut(s)	355
BshFI	GGCC	1 cut(s)	686
BsiSI	CCGG	1 cut(s)	257
BslI	CCNNNNNNNGG	2 cut(s)	340, 461
BsmAI	GTCTC	1 cut(s)	665
BsnI	GGCC	1 cut(s)	686
Bsp13I	TCCGGA	1 cut(s)	256
Bsp143I	GATC	5 cut(s)	76, 319, 464, 513, 532
BspACI	CCGC	2 cut(s)	236, 471
BspANI	GGCC	1 cut(s)	686
BspEI	TCCGGA	1 cut(s)	256
BspFNI	CGCG	1 cut(s)	355
BspLI	GGNNCC	1 cut(s)	78
BspPI	GGATC	5 cut(s)	71, 84, 314, 472, 521
BspTI	CTTAAG	1 cut(s)	335
BsrDI	GCAATG	1 cut(s)	605
BsrI	ACTGG	1 cut(s)	425
BssECI	CCNNGG	1 cut(s)	508
BssMI	GATC	5 cut(s)	76, 319, 464, 513, 532
BssT1I	CCWWGG	1 cut(s)	508
Bst4CI	ACNGT	2 cut(s)	103, 659
Bst6I	CTCTTC	1 cut(s)	549
BstAFI	CTTAAG	1 cut(s)	335
BstBAI	YACGTR	1 cut(s)	179
BstDEI	CTNAG	1 cut(s)	39
BstENI	CCTNNNNNAGG	1 cut(s)	338
BstF5I	GGATG	2 cut(s)	263, 610
BstFNI	CGCG	1 cut(s)	355
BstKTI	GATC	5 cut(s)	79, 322, 467, 516, 535
BstMAI	GTCTC	1 cut(s)	665
BstMBI	GATC	5 cut(s)	76, 319, 464, 513, 532
BstNSI	RCATGY	1 cut(s)	546
BstUI	CGCG	1 cut(s)	355
BstX2I	RGATCY	2 cut(s)	76, 319
BstYI	RGATCY	2 cut(s)	76, 319
BsuI	GTATCC	1 cut(s)	253
BsuRI	GGCC	1 cut(s)	686
BtgZI	GCGATG	1 cut(s)	609
BtsCI	GGATG	2 cut(s)	263, 610
Cfr13I	GGNCC	2 cut(s)	415, 685
CviAII	CATG	2 cut(s)	536, 543
CviJI	RGCY	8 cut(s)	65, 144, 168, 183, 453, 495, 578, 686
CviKI_1	RGCY	8 cut(s)	65, 144, 168, 183, 453, 495, 578, 686
DdeI	CTNAG	1 cut(s)	39
DpnI	GATC	5 cut(s)	78, 321, 466, 515, 534
DpnII	GATC	5 cut(s)	76, 319, 464, 513, 532
Eam1104I	CTCTTC	1 cut(s)	549
EarI	CTCTTC	1 cut(s)	549
Eco130I	CCWWGG	1 cut(s)	508
Eco47I	GGWCC	1 cut(s)	415
Eco57I	CTGAAG	1 cut(s)	677
EcoNI	CCTNNNNNAGG	1 cut(s)	338
EcoRI	GAATTC	1 cut(s)	325
EcoT14I	CCWWGG	1 cut(s)	508
ErhI	CCWWGG	1 cut(s)	508
FaeI	CATG	2 cut(s)	539, 546
FaiI	YATR	6 cut(s)	26, 131, 306, 315, 537, 544
FatI	CATG	2 cut(s)	535, 542
FauI	CCCGC	1 cut(s)	478
FbaI	TGATCA	1 cut(s)	532
FblI	GTMKAC	1 cut(s)	560
FokI	GGATG	2 cut(s)	250, 597
HaeIII	GGCC	1 cut(s)	686
HapII	CCGG	1 cut(s)	257
Hin1II	CATG	2 cut(s)	539, 546
HincII	GTYRAC	1 cut(s)	346
HindII	GTYRAC	1 cut(s)	346
HindIII	AAGCTT	1 cut(s)	142
HinfI	GANTC	5 cut(s)	149, 173, 191, 350, 557
HpaII	CCGG	1 cut(s)	257
HphI	GGTGA	6 cut(s)	396, 426, 459, 563, 564, 573
Hpy166II	GTNNAC	5 cut(s)	346, 359, 388, 561, 655
Hpy188I	TCNGA	3 cut(s)	88, 324, 615
Hpy188III	TCNNGA	5 cut(s)	47, 137, 257, 272, 483
Hpy8I	GTNNAC	5 cut(s)	346, 359, 388, 561, 655
HpyAV	CCTTC	2 cut(s)	334, 594
HpyCH4III	ACNGT	2 cut(s)	103, 659
HpyCH4IV	ACGT	1 cut(s)	178
HpyCH4V	TGCA	2 cut(s)	317, 610
HpyF3I	CTNAG	1 cut(s)	39
HpySE526I	ACGT	1 cut(s)	178
Hsp92II	CATG	2 cut(s)	539, 546
Kpn2I	TCCGGA	1 cut(s)	256
Ksp22I	TGATCA	1 cut(s)	532
Kzo9I	GATC	5 cut(s)	76, 319, 464, 513, 532
LmnI	GCTCC	1 cut(s)	500
LpnPI	CCDG	7 cut(s)	138, 183, 270, 285, 438, 588, 683
LweI	GCATC	1 cut(s)	619
MaeII	ACGT	1 cut(s)	178
MaeIII	GTNAC	2 cut(s)	97, 427
MalI	GATC	5 cut(s)	78, 321, 466, 515, 534
MboI	GATC	5 cut(s)	76, 319, 464, 513, 532
MboII	GAAGA	2 cut(s)	566, 632
MflI	RGATCY	2 cut(s)	76, 319
MluCI	AATT	3 cut(s)	82, 325, 588
MlyI	GAGTC	2 cut(s)	167, 566
MmeI	TCCRAC	1 cut(s)	54
MnlI	CCTC	6 cut(s)	171, 277, 417, 511, 589, 698
MroI	TCCGGA	1 cut(s)	256
MseI	TTAA	3 cut(s)	210, 336, 527
MslI	CAYNNNNRTG	1 cut(s)	680
MspCI	CTTAAG	1 cut(s)	335
MspI	CCGG	1 cut(s)	257
MvnI	CGCG	1 cut(s)	355
NdeII	GATC	5 cut(s)	76, 319, 464, 513, 532
NlaIII	CATG	2 cut(s)	539, 546
NlaIV	GGNNCC	1 cut(s)	78
NmuCI	GTSAC	1 cut(s)	97
NspI	RCATGY	1 cut(s)	546
PciI	ACATGT	1 cut(s)	542
PfeI	GAWTC	3 cut(s)	149, 191, 350
PleI	GAGTC	2 cut(s)	167, 565
PpsI	GAGTC	2 cut(s)	167, 565
Ppu21I	YACGTR	1 cut(s)	179
PscI	ACATGT	1 cut(s)	542
PspN4I	GGNNCC	1 cut(s)	78
PspPI	GGNCC	2 cut(s)	415, 685
PsuI	RGATCY	2 cut(s)	76, 319
RseI	CAYNNNNRTG	1 cut(s)	680
SaqAI	TTAA	3 cut(s)	210, 336, 527
Sau3AI	GATC	5 cut(s)	76, 319, 464, 513, 532
Sau96I	GGNCC	2 cut(s)	415, 685
SchI	GAGTC	2 cut(s)	167, 566
SfaNI	GCATC	1 cut(s)	619
SinI	GGWCC	1 cut(s)	415
SmiMI	CAYNNNNRTG	1 cut(s)	680
SmlI	CTYRAG	2 cut(s)	200, 335
SmoI	CTYRAG	2 cut(s)	200, 335
Sse9I	AATT	3 cut(s)	82, 325, 588
SsiI	CCGC	2 cut(s)	236, 471
SspI	AATATT	2 cut(s)	244, 525
StyI	CCWWGG	1 cut(s)	508
TaaI	ACNGT	2 cut(s)	103, 659
TaiI	ACGT	1 cut(s)	181
TaqI	TCGA	5 cut(s)	163, 194, 364, 409, 482
TasI	AATT	3 cut(s)	82, 325, 588
TfiI	GAWTC	3 cut(s)	149, 191, 350
Tru1I	TTAA	3 cut(s)	210, 336, 527
Tru9I	TTAA	3 cut(s)	210, 336, 527
TseFI	GTSAC	1 cut(s)	97
Tsp45I	GTSAC	1 cut(s)	97
TspDTI	ATGAA	3 cut(s)	555, 582, 664
Vha464I	CTTAAG	1 cut(s)	335
VpaK11BI	GGWCC	1 cut(s)	415
XagI	CCTNNNNNAGG	1 cut(s)	338
XapI	RAATTY	2 cut(s)	82, 325
XceI	RCATGY	1 cut(s)	546
XmiI	GTMKAC	1 cut(s)	560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.